Query gi|254780548|ref|YP_003064961.1| translocation protein TolB [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 447
No_of_seqs 270 out of 3240
Neff 7.7
Searched_HMMs 39220
Date Sun May 29 22:41:52 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780548.hhm -d /home/congqian_1/database/cdd/Cdd.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR02800 propeller_TolB Tol-P 100.0 0 0 899.7 40.0 412 27-443 2-439 (439)
2 PRK05137 tolB translocation pr 100.0 0 0 884.8 45.2 426 18-447 8-437 (437)
3 PRK03629 tolB translocation pr 100.0 0 0 875.6 44.2 425 13-446 1-430 (430)
4 PRK02889 tolB translocation pr 100.0 0 0 871.4 46.3 426 9-447 1-430 (430)
5 PRK04792 tolB translocation pr 100.0 0 0 873.8 43.9 426 12-446 1-450 (450)
6 PRK04922 tolB translocation pr 100.0 0 0 870.2 44.8 424 16-446 7-436 (439)
7 PRK00178 tolB translocation pr 100.0 0 0 861.9 44.4 426 11-447 2-433 (433)
8 PRK01742 tolB translocation pr 100.0 0 0 838.4 44.7 422 10-446 1-428 (430)
9 PRK04043 tolB translocation pr 100.0 0 0 743.6 41.8 408 13-442 1-419 (419)
10 PRK01029 tolB translocation pr 100.0 0 0 701.9 38.3 399 15-447 5-423 (425)
11 COG0823 TolB Periplasmic compo 100.0 0 0 560.4 31.3 410 29-446 12-425 (425)
12 TIGR02800 propeller_TolB Tol-P 100.0 0 0 351.8 21.6 221 223-445 166-394 (439)
13 PRK02889 tolB translocation pr 100.0 0 0 329.2 23.9 218 223-445 163-384 (430)
14 PRK03629 tolB translocation pr 100.0 0 0 326.6 23.6 217 224-444 165-384 (430)
15 PRK00178 tolB translocation pr 100.0 0 0 324.9 24.1 204 239-444 182-386 (433)
16 PRK05137 tolB translocation pr 100.0 0 0 326.0 23.0 217 224-444 169-389 (437)
17 PRK04792 tolB translocation pr 100.0 0 0 324.7 22.4 216 175-399 232-448 (450)
18 PRK04922 tolB translocation pr 100.0 2.8E-45 0 320.3 23.6 219 223-445 167-391 (439)
19 PRK01742 tolB translocation pr 100.0 2.4E-43 0 307.2 23.2 214 223-445 168-383 (430)
20 PRK01029 tolB translocation pr 100.0 6E-43 0 304.5 22.4 219 174-399 192-420 (425)
21 PRK04043 tolB translocation pr 100.0 8E-39 2E-43 276.9 22.5 218 224-445 156-378 (419)
22 COG0823 TolB Periplasmic compo 100.0 5.1E-32 1.3E-36 231.3 20.6 223 218-445 153-380 (425)
23 pfam00930 DPPIV_N Dipeptidyl p 100.0 8.3E-27 2.1E-31 196.5 28.1 247 191-444 23-333 (349)
24 pfam00930 DPPIV_N Dipeptidyl p 100.0 6.3E-26 1.6E-30 190.6 27.9 259 123-408 20-342 (349)
25 pfam04052 TolB_N TolB amino-te 99.9 6.9E-21 1.8E-25 156.8 10.8 103 35-139 1-106 (106)
26 COG4946 Uncharacterized protei 99.8 1.9E-17 4.7E-22 133.9 23.4 225 173-413 234-512 (668)
27 COG4946 Uncharacterized protei 99.7 5.6E-15 1.4E-19 117.3 14.1 103 163-275 39-145 (668)
28 PRK11028 6-phosphogluconolacto 99.6 4.8E-11 1.2E-15 91.0 28.1 256 174-443 45-325 (330)
29 pfam10282 Muc_lac_enz 3-carbox 99.4 1.1E-09 2.7E-14 82.0 25.7 261 174-442 47-341 (344)
30 KOG0266 consensus 99.4 3.6E-10 9.3E-15 85.1 21.2 220 209-446 201-434 (456)
31 cd00200 WD40 WD40 domain, foun 99.4 6.6E-09 1.7E-13 76.7 26.2 263 103-412 17-283 (289)
32 PRK11028 6-phosphogluconolacto 99.4 1.8E-09 4.6E-14 80.4 22.4 241 176-431 2-267 (330)
33 pfam10282 Muc_lac_enz 3-carbox 99.3 1.5E-08 3.9E-13 74.3 25.4 27 264-290 92-118 (344)
34 COG2706 3-carboxymuconate cycl 99.3 1.4E-08 3.5E-13 74.5 24.6 222 217-445 94-344 (346)
35 KOG0271 consensus 99.3 2.8E-10 7.3E-15 85.8 15.6 123 187-320 135-264 (480)
36 KOG0973 consensus 99.3 5.7E-10 1.5E-14 83.8 17.1 109 204-318 122-236 (942)
37 KOG0271 consensus 99.3 4.5E-10 1.1E-14 84.5 15.7 231 193-444 181-461 (480)
38 cd00200 WD40 WD40 domain, foun 99.3 1.1E-08 2.7E-13 75.3 22.6 234 193-445 33-272 (289)
39 KOG0266 consensus 99.3 1.9E-08 4.7E-13 73.7 23.0 216 191-421 227-453 (456)
40 KOG0318 consensus 99.2 6.9E-09 1.8E-13 76.5 20.1 70 213-287 192-264 (603)
41 KOG0272 consensus 99.2 3.3E-09 8.3E-14 78.7 16.1 180 214-406 178-362 (459)
42 COG1506 DAP2 Dipeptidyl aminop 99.1 5.9E-08 1.5E-12 70.3 20.6 269 102-387 66-350 (620)
43 KOG0772 consensus 99.1 3.4E-09 8.7E-14 78.6 14.2 247 191-447 189-470 (641)
44 pfam02897 Peptidase_S9_N Proly 99.1 4.4E-07 1.1E-11 64.5 24.8 250 174-431 137-409 (412)
45 COG1506 DAP2 Dipeptidyl aminop 99.1 1.9E-08 4.9E-13 73.6 16.9 245 174-431 71-350 (620)
46 COG2706 3-carboxymuconate cycl 99.1 9.8E-07 2.5E-11 62.1 25.1 175 216-397 149-341 (346)
47 KOG0293 consensus 99.1 7.7E-09 2E-13 76.2 14.3 179 213-405 226-411 (519)
48 KOG0973 consensus 99.1 1E-07 2.6E-12 68.7 19.9 157 214-378 72-252 (942)
49 pfam08662 eIF2A Eukaryotic tra 99.1 4.3E-08 1.1E-12 71.2 17.9 157 264-429 12-184 (194)
50 KOG0291 consensus 99.1 3.7E-07 9.5E-12 64.9 22.6 35 283-317 459-494 (893)
51 KOG0291 consensus 99.1 8.9E-07 2.3E-11 62.4 24.0 81 235-317 456-536 (893)
52 KOG0318 consensus 99.0 2.5E-07 6.3E-12 66.2 20.5 131 101-242 109-264 (603)
53 KOG0263 consensus 99.0 1.2E-07 2.9E-12 68.4 17.9 209 194-422 434-649 (707)
54 pfam02897 Peptidase_S9_N Proly 99.0 3.2E-06 8.2E-11 58.7 25.3 214 217-436 131-368 (412)
55 KOG0279 consensus 99.0 7.2E-07 1.8E-11 63.0 20.7 214 191-421 85-312 (315)
56 KOG2139 consensus 99.0 3.5E-07 8.9E-12 65.2 19.0 157 202-365 185-364 (445)
57 KOG2139 consensus 99.0 4.5E-08 1.1E-12 71.1 14.1 197 202-407 131-363 (445)
58 pfam08450 SGL SMP-30/Gluconola 99.0 2.2E-06 5.6E-11 59.8 22.6 200 216-435 4-224 (246)
59 KOG0315 consensus 98.9 1.3E-06 3.2E-11 61.4 20.5 264 124-430 18-295 (311)
60 KOG0305 consensus 98.9 1.3E-06 3.2E-11 61.4 20.5 219 193-423 199-462 (484)
61 KOG0279 consensus 98.9 6.3E-07 1.6E-11 63.4 18.7 196 202-408 54-252 (315)
62 KOG1274 consensus 98.9 5.6E-07 1.4E-11 63.8 18.1 178 217-409 102-290 (933)
63 TIGR02171 Fb_sc_TIGR02171 Fibr 98.9 6E-08 1.5E-12 70.3 12.7 126 165-299 325-467 (982)
64 KOG1446 consensus 98.9 7E-06 1.8E-10 56.4 23.7 253 127-425 37-306 (311)
65 KOG1274 consensus 98.9 1.6E-06 4E-11 60.8 19.9 158 193-364 120-288 (933)
66 PRK10115 protease 2; Provision 98.9 4.4E-06 1.1E-10 57.8 21.2 262 174-445 138-466 (686)
67 pfam06433 Me-amine-dh_H Methyl 98.9 9.1E-06 2.3E-10 55.7 24.0 207 218-436 101-333 (342)
68 KOG2055 consensus 98.8 1.6E-07 4E-12 67.5 13.2 196 214-421 260-466 (514)
69 KOG0273 consensus 98.8 7.7E-07 2E-11 62.8 15.8 75 214-296 238-312 (524)
70 PRK10115 protease 2; Provision 98.8 1.5E-05 3.8E-10 54.3 24.5 116 216-334 131-255 (686)
71 COG5354 Uncharacterized protei 98.8 2.2E-06 5.7E-11 59.8 17.9 265 127-421 109-394 (561)
72 KOG0273 consensus 98.8 5.2E-06 1.3E-10 57.3 18.7 34 193-227 259-292 (524)
73 pfam08662 eIF2A Eukaryotic tra 98.8 8.7E-07 2.2E-11 62.5 14.7 139 218-364 12-161 (194)
74 KOG1407 consensus 98.7 6.8E-06 1.7E-10 56.5 18.2 246 129-410 45-293 (313)
75 KOG1446 consensus 98.7 3E-05 7.6E-10 52.2 21.7 238 192-445 39-286 (311)
76 KOG0772 consensus 98.7 1.1E-06 2.9E-11 61.7 13.4 183 192-382 237-448 (641)
77 KOG4497 consensus 98.6 9.3E-07 2.4E-11 62.3 11.4 105 206-318 87-195 (447)
78 KOG0286 consensus 98.6 5.2E-05 1.3E-09 50.6 22.9 203 193-410 79-293 (343)
79 KOG2314 consensus 98.6 1.9E-05 4.9E-10 53.5 18.1 95 218-322 312-414 (698)
80 KOG0272 consensus 98.6 2.1E-06 5.3E-11 60.0 13.1 212 191-420 199-416 (459)
81 KOG0263 consensus 98.6 4E-06 1E-10 58.0 13.9 150 248-406 442-594 (707)
82 KOG2315 consensus 98.6 2.6E-05 6.5E-10 52.7 18.0 220 217-447 171-413 (566)
83 KOG2055 consensus 98.6 4.4E-05 1.1E-09 51.1 18.9 184 210-407 213-405 (514)
84 pfam04762 IKI3 IKI3 family. Me 98.6 7E-05 1.8E-09 49.8 20.2 84 190-276 232-318 (918)
85 pfam08450 SGL SMP-30/Gluconola 98.5 2.1E-05 5.4E-10 53.2 16.7 212 175-407 12-243 (246)
86 COG3386 Gluconolactonase [Carb 98.5 8.3E-05 2.1E-09 49.3 19.5 168 239-412 87-278 (307)
87 COG5616 Predicted integral mem 98.5 1.1E-06 2.8E-11 61.8 9.9 118 48-169 25-149 (152)
88 KOG0275 consensus 98.5 2.8E-06 7.2E-11 59.1 11.4 56 372-432 416-476 (508)
89 KOG0315 consensus 98.5 0.00011 2.8E-09 48.5 20.8 212 191-422 22-245 (311)
90 pfam10647 Gmad1 Lipoprotein Lp 98.5 6.9E-05 1.8E-09 49.8 18.2 204 213-431 25-243 (254)
91 KOG2314 consensus 98.5 3.9E-05 1E-09 51.4 16.5 189 218-408 353-556 (698)
92 KOG2096 consensus 98.5 1.6E-05 4.1E-10 54.0 14.4 162 237-407 209-391 (420)
93 KOG2096 consensus 98.5 7.8E-06 2E-10 56.1 12.7 134 268-407 197-349 (420)
94 KOG1407 consensus 98.5 0.00013 3.3E-09 47.9 20.7 214 215-445 68-283 (313)
95 KOG0293 consensus 98.5 3.3E-06 8.4E-11 58.6 10.6 171 191-379 248-425 (519)
96 KOG0305 consensus 98.4 1.7E-05 4.3E-10 53.9 14.0 213 218-446 184-443 (484)
97 COG5354 Uncharacterized protei 98.4 3.9E-05 1E-09 51.4 15.9 138 216-362 227-375 (561)
98 KOG0265 consensus 98.4 0.00013 3.2E-09 48.0 18.1 248 162-428 39-300 (338)
99 KOG2394 consensus 98.4 4E-05 1E-09 51.4 15.6 51 264-317 297-348 (636)
100 KOG0275 consensus 98.4 1.5E-05 3.8E-10 54.3 13.0 239 106-387 223-476 (508)
101 pfam02239 Cytochrom_D1 Cytochr 98.4 0.00019 4.9E-09 46.8 21.5 194 220-425 136-348 (369)
102 COG3391 Uncharacterized conser 98.4 0.0002 5.1E-09 46.7 25.4 162 216-385 120-289 (381)
103 KOG1273 consensus 98.4 1.9E-05 4.8E-10 53.6 12.9 235 192-445 46-304 (405)
104 pfam07433 DUF1513 Protein of u 98.3 0.00032 8.1E-09 45.3 21.2 198 176-387 18-255 (304)
105 pfam07676 PD40 WD40-like Beta 98.3 5.2E-07 1.3E-11 64.0 2.8 37 294-330 1-37 (37)
106 KOG2315 consensus 98.2 0.00042 1.1E-08 44.6 17.7 153 217-377 223-390 (566)
107 KOG0284 consensus 98.2 1.1E-05 2.9E-10 55.0 9.3 171 178-363 194-367 (464)
108 pfam11684 DUF3280 Protein of u 98.2 1.4E-05 3.6E-10 54.4 9.7 112 47-158 1-134 (140)
109 KOG0296 consensus 98.2 0.00043 1.1E-08 44.5 19.8 99 191-298 130-229 (399)
110 KOG0282 consensus 98.2 6.2E-05 1.6E-09 50.1 12.9 236 193-446 241-486 (503)
111 KOG0771 consensus 98.2 0.00018 4.6E-09 47.0 15.0 211 217-442 150-373 (398)
112 TIGR02171 Fb_sc_TIGR02171 Fibr 98.2 1.6E-05 4E-10 54.1 9.6 178 260-446 367-631 (982)
113 KOG0645 consensus 98.2 0.00054 1.4E-08 43.8 19.4 153 213-375 63-223 (312)
114 KOG1273 consensus 98.2 0.00055 1.4E-08 43.8 19.1 193 193-401 89-305 (405)
115 TIGR02658 TTQ_MADH_Hv methylam 98.2 0.00058 1.5E-08 43.6 19.2 224 195-436 97-351 (360)
116 KOG1524 consensus 98.2 9.4E-05 2.4E-09 48.9 12.7 18 258-275 257-274 (737)
117 KOG0650 consensus 98.2 0.0006 1.5E-08 43.5 18.4 140 262-409 526-680 (733)
118 KOG2048 consensus 98.2 0.0002 5.2E-09 46.6 14.2 119 215-342 386-513 (691)
119 pfam04762 IKI3 IKI3 family. Me 98.2 0.00064 1.6E-08 43.3 20.1 15 214-228 302-316 (918)
120 KOG0296 consensus 98.1 0.00029 7.3E-09 45.7 14.7 113 199-320 95-209 (399)
121 KOG2110 consensus 98.1 0.00078 2E-08 42.7 20.3 106 222-332 140-248 (391)
122 KOG1524 consensus 98.1 8.8E-05 2.3E-09 49.1 11.4 134 205-363 140-273 (737)
123 KOG1523 consensus 98.1 0.00013 3.3E-09 48.0 12.2 27 308-337 213-239 (361)
124 COG3386 Gluconolactonase [Carb 98.1 0.00054 1.4E-08 43.8 15.4 155 210-379 23-193 (307)
125 KOG0283 consensus 98.1 0.00018 4.6E-09 47.0 12.5 130 277-422 429-576 (712)
126 KOG4497 consensus 98.0 4.2E-05 1.1E-09 51.2 8.8 44 218-275 185-228 (447)
127 KOG1445 consensus 98.0 0.00027 7E-09 45.8 12.8 75 239-317 702-780 (1012)
128 KOG0306 consensus 98.0 0.0011 2.9E-08 41.7 16.4 160 192-364 397-568 (888)
129 KOG0278 consensus 98.0 0.00051 1.3E-08 44.0 13.9 194 211-423 100-298 (334)
130 COG3391 Uncharacterized conser 98.0 0.0012 3E-08 41.5 18.7 196 218-425 80-284 (381)
131 COG1462 CsgG Uncharacterized p 98.0 1.4E-05 3.6E-10 54.4 5.7 57 60-118 69-127 (252)
132 PRK13615 lipoprotein LpqB; Pro 98.0 0.0011 2.8E-08 41.8 15.3 18 157-174 233-250 (532)
133 KOG0310 consensus 98.0 0.0013 3.3E-08 41.3 15.7 140 214-362 113-254 (487)
134 PRK12370 invasion protein regu 98.0 0.0001 2.6E-09 48.6 9.9 120 47-169 121-243 (553)
135 KOG1009 consensus 98.0 0.00068 1.7E-08 43.1 13.9 71 213-288 125-195 (434)
136 KOG0645 consensus 98.0 0.0014 3.7E-08 40.9 20.9 197 205-420 99-309 (312)
137 KOG0643 consensus 97.9 0.0017 4.2E-08 40.5 20.3 143 213-363 95-248 (327)
138 pfam02239 Cytochrom_D1 Cytochr 97.9 0.0017 4.3E-08 40.5 20.1 201 191-406 150-367 (369)
139 pfam10647 Gmad1 Lipoprotein Lp 97.9 0.0018 4.6E-08 40.3 16.0 194 174-386 35-243 (254)
140 KOG0306 consensus 97.9 0.002 5E-08 40.0 16.4 143 214-366 376-528 (888)
141 KOG2048 consensus 97.9 0.0014 3.7E-08 41.0 14.1 153 259-424 384-548 (691)
142 KOG0286 consensus 97.9 0.0021 5.4E-08 39.8 22.4 80 239-321 168-249 (343)
143 KOG0284 consensus 97.8 0.00018 4.6E-09 47.0 9.1 152 216-377 185-337 (464)
144 KOG0771 consensus 97.8 0.00091 2.3E-08 42.3 12.6 139 216-365 191-343 (398)
145 KOG2110 consensus 97.8 0.00082 2.1E-08 42.6 11.7 187 174-387 141-341 (391)
146 KOG2394 consensus 97.8 0.00033 8.5E-09 45.2 9.7 66 217-287 296-361 (636)
147 KOG0639 consensus 97.8 0.0013 3.2E-08 41.3 12.4 177 213-405 467-649 (705)
148 PRK13616 lipoprotein LpqB; Pro 97.8 0.0031 8E-08 38.7 17.3 161 260-431 351-533 (590)
149 KOG1920 consensus 97.7 0.0035 8.8E-08 38.4 18.5 12 217-228 247-258 (1265)
150 KOG0277 consensus 97.7 0.0011 2.9E-08 41.7 11.5 238 172-422 19-265 (311)
151 COG1770 PtrB Protease II [Amin 97.7 0.0039 9.9E-08 38.1 21.2 209 174-388 140-405 (682)
152 KOG1063 consensus 97.7 0.0019 4.9E-08 40.1 12.5 107 208-320 264-380 (764)
153 KOG0310 consensus 97.7 0.004 1E-07 38.0 15.4 170 185-370 129-302 (487)
154 pfam07676 PD40 WD40-like Beta 97.7 2.6E-05 6.6E-10 52.6 2.6 19 393-411 12-30 (37)
155 PRK13614 lipoprotein LpqB; Pro 97.7 0.0043 1.1E-07 37.8 16.9 161 261-429 346-523 (573)
156 PRK13614 lipoprotein LpqB; Pro 97.6 0.0048 1.2E-07 37.5 14.9 164 215-387 346-526 (573)
157 KOG1539 consensus 97.6 0.0008 2E-08 42.7 9.5 90 326-420 556-646 (910)
158 KOG1538 consensus 97.6 0.00035 8.9E-09 45.1 7.6 21 254-274 260-280 (1081)
159 pfam06433 Me-amine-dh_H Methyl 97.6 0.0052 1.3E-07 37.2 19.0 251 175-435 2-289 (342)
160 KOG0264 consensus 97.6 0.005 1.3E-07 37.4 13.4 157 260-422 230-404 (422)
161 KOG1538 consensus 97.6 0.0022 5.6E-08 39.7 11.6 10 265-274 230-239 (1081)
162 KOG2041 consensus 97.5 0.0044 1.1E-07 37.7 11.6 12 217-228 264-275 (1189)
163 KOG0265 consensus 97.4 0.0083 2.1E-07 35.9 16.0 245 126-406 69-325 (338)
164 KOG1539 consensus 97.4 0.0087 2.2E-07 35.7 16.7 16 352-367 623-638 (910)
165 pfam07433 DUF1513 Protein of u 97.4 0.0088 2.2E-07 35.7 23.8 191 217-412 10-239 (304)
166 KOG0277 consensus 97.4 0.0088 2.2E-07 35.7 14.6 88 192-285 130-218 (311)
167 KOG0282 consensus 97.4 0.0022 5.7E-08 39.7 9.4 179 214-405 217-401 (503)
168 KOG0288 consensus 97.4 0.0035 8.9E-08 38.4 10.4 34 350-386 345-378 (459)
169 KOG0288 consensus 97.4 0.01 2.6E-07 35.2 13.4 236 149-407 200-449 (459)
170 PRK13613 lipoprotein LpqB; Pro 97.4 0.011 2.8E-07 35.1 19.5 162 261-429 365-549 (603)
171 TIGR03300 assembly_YfgL outer 97.3 0.011 2.8E-07 35.1 25.7 254 127-436 76-351 (377)
172 COG2319 FOG: WD40 repeat [Gene 97.3 0.012 3.1E-07 34.8 19.7 179 192-383 135-318 (466)
173 KOG0269 consensus 97.3 0.011 2.8E-07 35.0 12.0 113 217-335 182-297 (839)
174 PRK13615 lipoprotein LpqB; Pro 97.3 0.013 3.3E-07 34.6 14.4 159 262-430 313-483 (532)
175 KOG2919 consensus 97.2 0.014 3.6E-07 34.3 14.1 158 214-384 161-333 (406)
176 PRK13616 lipoprotein LpqB; Pro 97.2 0.015 3.8E-07 34.1 18.2 165 214-389 351-536 (590)
177 pfam03783 CsgG Curli productio 97.2 0.001 2.6E-08 42.0 5.9 76 45-120 7-100 (207)
178 KOG0307 consensus 97.2 0.008 2E-07 36.0 10.4 178 190-376 138-326 (1049)
179 KOG2106 consensus 97.2 0.016 4.2E-07 33.9 15.1 76 328-405 430-507 (626)
180 KOG0307 consensus 97.1 0.0081 2.1E-07 35.9 9.8 114 216-331 211-326 (1049)
181 PRK13613 lipoprotein LpqB; Pro 97.0 0.026 6.6E-07 32.6 18.2 79 306-385 461-550 (603)
182 KOG0639 consensus 96.9 0.0056 1.4E-07 37.0 7.7 31 396-431 599-629 (705)
183 KOG2100 consensus 96.8 0.035 8.8E-07 31.7 21.2 102 306-408 344-456 (755)
184 KOG1063 consensus 96.8 0.022 5.7E-07 33.0 9.8 68 215-285 320-388 (764)
185 KOG3617 consensus 96.8 0.013 3.2E-07 34.6 8.4 21 64-84 137-160 (1416)
186 KOG0278 consensus 96.7 0.038 9.8E-07 31.4 13.5 176 191-381 124-301 (334)
187 KOG1445 consensus 96.7 0.039 1E-06 31.3 12.0 28 264-292 634-662 (1012)
188 KOG2106 consensus 96.7 0.043 1.1E-06 31.1 16.7 68 372-444 429-501 (626)
189 KOG0268 consensus 96.6 0.042 1.1E-06 31.2 10.3 174 238-424 168-347 (433)
190 TIGR02658 TTQ_MADH_Hv methylam 96.6 0.045 1.2E-06 30.9 15.4 256 172-436 16-308 (360)
191 KOG0643 consensus 96.6 0.046 1.2E-06 30.9 14.5 178 108-318 64-248 (327)
192 KOG0640 consensus 96.6 0.047 1.2E-06 30.9 14.8 194 209-420 215-424 (430)
193 KOG1009 consensus 96.6 0.048 1.2E-06 30.8 11.0 61 160-230 124-184 (434)
194 KOG0269 consensus 96.5 0.054 1.4E-06 30.4 11.6 158 101-291 139-297 (839)
195 KOG0299 consensus 96.5 0.056 1.4E-06 30.3 15.9 70 213-287 204-273 (479)
196 KOG2041 consensus 96.5 0.032 8.3E-07 31.9 8.9 144 210-366 114-278 (1189)
197 KOG1034 consensus 96.5 0.047 1.2E-06 30.9 9.6 60 355-422 316-381 (385)
198 KOG1332 consensus 96.5 0.058 1.5E-06 30.2 18.5 251 152-430 11-294 (299)
199 KOG1408 consensus 96.5 0.031 7.9E-07 32.0 8.7 23 307-330 465-487 (1080)
200 COG2319 FOG: WD40 repeat [Gene 96.4 0.061 1.6E-06 30.1 24.0 167 206-382 193-362 (466)
201 PRK11138 outer membrane protei 96.4 0.062 1.6E-06 30.0 24.5 263 128-435 81-365 (394)
202 KOG4283 consensus 96.4 0.064 1.6E-06 29.9 12.5 107 211-318 143-263 (397)
203 COG1770 PtrB Protease II [Amin 96.3 0.075 1.9E-06 29.5 24.4 76 214-291 131-209 (682)
204 KOG1920 consensus 96.2 0.078 2E-06 29.4 16.0 99 263-363 201-306 (1265)
205 KOG0295 consensus 96.2 0.08 2E-06 29.3 12.5 175 194-381 175-366 (406)
206 KOG0289 consensus 96.0 0.096 2.5E-06 28.7 21.7 115 261-386 351-469 (506)
207 KOG4283 consensus 96.0 0.1 2.6E-06 28.5 16.6 89 239-329 126-216 (397)
208 KOG2100 consensus 96.0 0.1 2.7E-06 28.5 18.2 77 351-427 344-425 (755)
209 KOG1214 consensus 95.7 0.13 3.3E-06 27.9 12.7 58 372-431 1091-1150(1289)
210 COG3490 Uncharacterized protei 95.7 0.13 3.4E-06 27.8 10.6 251 104-387 30-318 (366)
211 KOG0268 consensus 95.6 0.14 3.5E-06 27.7 10.0 171 194-378 170-346 (433)
212 PRK11138 outer membrane protei 95.5 0.15 3.8E-06 27.4 23.7 258 110-422 110-392 (394)
213 KOG4378 consensus 95.5 0.15 3.9E-06 27.4 15.5 11 308-318 257-267 (673)
214 KOG0319 consensus 95.5 0.16 4E-06 27.3 17.5 63 218-287 331-394 (775)
215 TIGR02722 lp_ uncharacterized 95.5 0.024 6.2E-07 32.7 4.5 78 63-142 106-209 (215)
216 KOG0647 consensus 95.4 0.16 4.1E-06 27.2 12.0 71 192-268 53-124 (347)
217 KOG1332 consensus 95.4 0.12 3E-06 28.2 7.8 165 214-384 105-293 (299)
218 COG3490 Uncharacterized protei 95.4 0.17 4.3E-06 27.1 10.7 187 190-386 48-268 (366)
219 KOG0319 consensus 95.4 0.17 4.4E-06 27.0 13.4 14 126-139 127-140 (775)
220 KOG1408 consensus 95.3 0.18 4.6E-06 26.9 13.8 22 263-285 465-486 (1080)
221 KOG2919 consensus 95.2 0.19 4.8E-06 26.8 11.8 31 333-364 237-267 (406)
222 KOG4378 consensus 95.2 0.19 4.8E-06 26.8 14.2 69 218-293 215-283 (673)
223 TIGR03300 assembly_YfgL outer 95.2 0.2 5E-06 26.7 21.6 235 127-412 116-371 (377)
224 pfam07250 Glyoxal_oxid_N Glyox 95.2 0.2 5E-06 26.7 12.9 48 241-289 50-98 (243)
225 KOG0295 consensus 95.1 0.2 5.2E-06 26.6 13.0 214 191-422 130-364 (406)
226 KOG1523 consensus 94.9 0.24 6.1E-06 26.1 15.8 32 350-384 210-241 (361)
227 pfam04053 Coatomer_WDAD Coatom 94.8 0.25 6.3E-06 26.0 15.4 44 284-333 126-170 (435)
228 KOG0264 consensus 94.7 0.26 6.7E-06 25.8 17.6 57 350-408 276-335 (422)
229 COG3204 Uncharacterized protei 94.6 0.27 6.9E-06 25.7 11.9 110 214-332 88-210 (316)
230 pfam02333 Phytase Phytase. Phy 94.5 0.28 7.3E-06 25.6 15.1 30 177-207 88-117 (353)
231 KOG0313 consensus 94.4 0.3 7.6E-06 25.4 18.5 217 193-422 127-376 (423)
232 KOG0650 consensus 94.4 0.31 7.8E-06 25.4 14.2 145 215-367 525-681 (733)
233 KOG1520 consensus 94.3 0.32 8.1E-06 25.3 11.8 27 399-426 342-368 (376)
234 KOG3621 consensus 94.2 0.32 8.3E-06 25.2 7.6 51 287-338 194-250 (726)
235 KOG3914 consensus 93.9 0.38 9.6E-06 24.8 13.2 20 209-228 149-168 (390)
236 KOG0294 consensus 93.8 0.39 1E-05 24.7 13.0 52 263-317 133-184 (362)
237 KOG0303 consensus 93.5 0.44 1.1E-05 24.3 16.9 106 210-322 172-283 (472)
238 PRK10153 DNA-binding transcrip 93.4 0.46 1.2E-05 24.2 12.5 95 60-168 217-311 (512)
239 KOG0646 consensus 93.4 0.46 1.2E-05 24.2 15.0 48 239-290 200-247 (476)
240 KOG0644 consensus 93.1 0.32 8.1E-06 25.3 5.9 46 74-122 108-153 (1113)
241 KOG1963 consensus 93.0 0.52 1.3E-05 23.8 10.7 68 214-289 254-321 (792)
242 pfam11768 DUF3312 Protein of u 93.0 0.53 1.4E-05 23.8 15.9 264 100-388 40-339 (544)
243 pfam05787 DUF839 Bacterial pro 92.9 0.55 1.4E-05 23.7 11.1 39 373-411 473-514 (515)
244 pfam05643 DUF799 Putative bact 91.6 0.59 1.5E-05 23.5 5.7 99 45-144 33-150 (215)
245 KOG4328 consensus 91.1 0.88 2.2E-05 22.3 15.5 78 215-297 190-272 (498)
246 KOG0292 consensus 90.8 0.94 2.4E-05 22.1 18.3 190 95-293 114-351 (1202)
247 COG4590 ABC-type uncharacteriz 90.5 0.98 2.5E-05 22.0 7.4 149 218-375 227-384 (733)
248 PRK11067 outer membrane protei 90.4 0.57 1.4E-05 23.6 4.7 70 11-82 1-75 (801)
249 TIGR03032 conserved hypothetic 89.5 1.2 3E-05 21.5 12.4 54 99-152 8-70 (335)
250 KOG0267 consensus 87.5 0.75 1.9E-05 22.8 3.7 57 205-268 148-207 (825)
251 KOG1007 consensus 87.0 1.7 4.3E-05 20.4 17.1 221 129-374 43-286 (370)
252 KOG0316 consensus 86.7 1.7 4.4E-05 20.3 16.3 210 127-379 40-257 (307)
253 pfam05567 Neisseria_PilC Neiss 86.6 1.8 4.5E-05 20.3 12.1 92 267-360 670-784 (1039)
254 KOG4532 consensus 86.6 1.8 4.5E-05 20.3 16.6 67 215-286 162-231 (344)
255 KOG4547 consensus 86.5 1.8 4.5E-05 20.3 17.2 148 105-293 67-225 (541)
256 KOG0300 consensus 86.3 1.8 4.7E-05 20.2 12.8 63 259-325 274-337 (481)
257 KOG0974 consensus 85.6 2 5E-05 20.0 13.8 19 209-227 173-191 (967)
258 KOG2281 consensus 84.7 2.2 5.5E-05 19.7 13.9 19 371-389 530-549 (867)
259 KOG0308 consensus 84.1 2.3 5.9E-05 19.5 11.5 109 215-336 175-287 (735)
260 pfam03088 Str_synth Strictosid 83.7 2.4 6.1E-05 19.4 7.1 36 372-407 38-74 (89)
261 KOG0302 consensus 83.5 2.4 6.2E-05 19.4 16.0 28 110-138 94-122 (440)
262 KOG0641 consensus 83.1 2.5 6.4E-05 19.2 19.7 205 209-432 88-311 (350)
263 KOG0322 consensus 82.9 1.9 4.9E-05 20.0 4.0 75 328-407 231-311 (323)
264 TIGR03431 PhnD phosphonate ABC 82.5 2.2 5.7E-05 19.6 4.1 57 12-76 1-60 (288)
265 cd00861 ProRS_anticodon_short 81.7 2.8 7.2E-05 18.9 5.9 73 47-126 1-73 (94)
266 COG4247 Phy 3-phytase (myo-ino 81.6 2.8 7.3E-05 18.9 10.0 12 128-140 79-90 (364)
267 PRK12325 prolyl-tRNA synthetas 80.8 3 7.8E-05 18.7 5.9 47 42-88 29-76 (438)
268 pfam04841 Vps16_N Vps16, N-ter 80.2 3.2 8.1E-05 18.6 20.2 21 348-368 216-236 (408)
269 PRK11906 transcriptional regul 80.2 3.2 8.1E-05 18.6 9.6 123 38-166 108-234 (458)
270 TIGR02604 Piru_Ver_Nterm putat 78.3 3.6 9.3E-05 18.2 10.7 108 198-322 118-237 (459)
271 PRK09194 prolyl-tRNA synthetas 76.8 4 0.0001 17.9 6.4 45 42-86 29-74 (570)
272 KOG1912 consensus 76.3 4.1 0.0001 17.8 9.6 148 128-288 137-304 (1062)
273 KOG0321 consensus 76.3 4.1 0.0001 17.8 7.9 233 102-356 107-370 (720)
274 KOG2111 consensus 76.1 4.2 0.00011 17.8 21.9 170 127-333 76-257 (346)
275 PRK09495 glnH glutamine ABC tr 75.6 4.3 0.00011 17.7 5.6 66 13-83 1-71 (247)
276 KOG1036 consensus 74.6 4.5 0.00012 17.5 11.6 201 192-409 76-294 (323)
277 KOG4499 consensus 73.8 4.8 0.00012 17.4 12.7 46 249-294 149-194 (310)
278 KOG0649 consensus 73.0 4.9 0.00013 17.3 8.9 70 220-297 123-193 (325)
279 cd00738 HGTP_anticodon HGTP an 72.7 5 0.00013 17.2 5.4 73 47-126 1-73 (94)
280 COG1520 FOG: WD40-like repeat 72.6 5 0.00013 17.2 14.8 13 283-295 210-222 (370)
281 TIGR03606 non_repeat_PQQ dehyd 72.0 5.2 0.00013 17.1 13.0 20 36-55 21-40 (454)
282 COG3417 FlgN Collagen-binding 70.7 5.6 0.00014 16.9 7.0 20 11-32 2-21 (200)
283 pfam12566 DUF3748 Protein of u 69.8 3.5 8.9E-05 18.3 2.3 10 397-406 75-84 (122)
284 pfam12458 DUF3686 ATPase invol 69.8 5.8 0.00015 16.8 7.7 109 283-409 254-368 (448)
285 TIGR02276 beta_rpt_yvtn 40-res 69.4 5.9 0.00015 16.8 3.4 10 239-248 16-25 (42)
286 cd00858 GlyRS_anticodon GlyRS 67.8 6.4 0.00016 16.5 6.4 91 38-139 17-107 (121)
287 KOG0276 consensus 67.7 6.4 0.00016 16.5 19.1 12 128-139 79-90 (794)
288 PRK13528 outer membrane recept 67.0 6.6 0.00017 16.5 3.2 21 10-30 3-23 (727)
289 KOG2066 consensus 66.9 6.6 0.00017 16.4 9.7 19 255-275 158-176 (846)
290 COG3211 PhoX Predicted phospha 66.9 6.7 0.00017 16.4 10.9 39 376-414 537-578 (616)
291 KOG4227 consensus 65.4 7.1 0.00018 16.3 13.3 109 215-329 153-270 (609)
292 KOG0270 consensus 65.1 7.2 0.00018 16.2 13.9 67 216-285 248-314 (463)
293 KOG1587 consensus 65.0 7.2 0.00018 16.2 11.2 47 239-285 224-270 (555)
294 pfam09910 DUF2139 Uncharacteri 62.3 8 0.00021 15.9 10.4 15 414-428 311-325 (339)
295 PRK11023 hypothetical protein; 61.6 5.7 0.00014 16.9 2.1 23 159-181 129-151 (191)
296 pfam10566 Glyco_hydro_97 Glyco 61.3 5.4 0.00014 17.0 1.9 12 122-133 120-131 (643)
297 TIGR02434 CobF precorrin-6A sy 61.0 7 0.00018 16.3 2.4 98 62-173 13-112 (259)
298 KOG2377 consensus 60.2 8.8 0.00022 15.6 12.3 13 217-230 118-130 (657)
299 pfam00349 Hexokinase_1 Hexokin 59.6 9 0.00023 15.6 6.3 66 141-207 10-78 (205)
300 cd02426 Pol_gamma_b_Cterm C-te 59.4 9 0.00023 15.5 5.4 98 36-139 16-113 (128)
301 pfam05694 SBP56 56kDa selenium 58.1 9.5 0.00024 15.4 11.0 23 107-136 86-108 (461)
302 pfam08553 VID27 VID27 cytoplas 55.7 10 0.00026 15.1 12.0 133 280-428 496-648 (788)
303 pfam10626 TraO Conjugative tra 55.7 2 5.2E-05 19.9 -1.1 26 13-38 1-26 (193)
304 PRK10002 outer membrane protei 53.8 11 0.00028 14.9 2.7 23 12-35 1-23 (362)
305 KOG2695 consensus 53.6 11 0.00028 14.9 11.2 179 216-409 216-403 (425)
306 TIGR02814 pfaD_fam PfaD family 53.5 4.2 0.00011 17.7 0.3 11 160-170 157-167 (449)
307 COG4831 Roadblock/LC7 domain [ 52.1 8.7 0.00022 15.7 1.7 11 218-228 19-29 (109)
308 COG2113 ProX ABC-type proline/ 51.9 12 0.0003 14.7 4.6 69 12-87 3-71 (302)
309 PRK10064 colicin I receptor; P 51.8 9.1 0.00023 15.5 1.8 57 13-71 8-73 (663)
310 KOG0379 consensus 51.4 12 0.00031 14.7 12.6 107 190-298 138-257 (482)
311 PRK13684 Ycf48-like protein; P 50.7 12 0.00032 14.6 4.1 25 3-27 1-25 (333)
312 PRK13861 type IV secretion sys 50.6 8.4 0.00021 15.8 1.4 27 312-338 205-232 (293)
313 pfam05096 Glu_cyclase_2 Glutam 50.5 12 0.00032 14.6 18.0 183 219-423 52-260 (264)
314 TIGR01059 gyrB DNA gyrase, B s 49.9 3.8 9.6E-05 18.1 -0.4 37 48-88 74-112 (818)
315 PRK11385 hypothetical protein; 49.2 11 0.00027 15.1 1.8 36 144-179 7-46 (245)
316 PRK03757 hypothetical protein; 49.1 12 0.00031 14.7 2.0 28 13-40 1-29 (191)
317 COG4509 Uncharacterized protei 48.6 13 0.00033 14.5 2.1 13 1-13 1-13 (244)
318 pfam03900 Porphobil_deamC Porp 47.1 14 0.00036 14.3 6.2 43 121-164 30-72 (74)
319 pfam05090 VKG_Carbox Vitamin K 45.5 13 0.00033 14.5 1.7 23 275-297 343-365 (446)
320 PRK11528 hypothetical protein; 45.4 7.9 0.0002 15.9 0.6 23 13-35 1-23 (254)
321 PRK09465 tolC outer membrane c 45.1 11 0.00029 14.9 1.4 23 13-35 1-23 (446)
322 PRK10653 D-ribose transporter 44.3 15 0.00039 14.0 6.6 90 11-116 1-91 (295)
323 pfam03888 MucB_RseB MucB/RseB 44.0 12 0.00031 14.6 1.4 23 13-35 1-23 (314)
324 COG2133 Glucose/sorbosone dehy 43.1 16 0.00041 13.9 19.2 58 363-425 335-398 (399)
325 TIGR02636 galM_Leloir galactos 41.6 17 0.00043 13.7 5.0 31 272-302 139-171 (346)
326 PRK10260 hypothetical protein; 41.6 17 0.00043 13.7 2.3 26 11-36 1-26 (306)
327 PRK11627 hypothetical protein; 41.5 17 0.00043 13.7 6.2 21 61-82 76-96 (192)
328 KOG1188 consensus 41.3 17 0.00044 13.7 13.8 108 224-336 130-244 (376)
329 KOG1064 consensus 40.8 17 0.00045 13.6 3.3 41 294-336 2211-2251(2439)
330 pfam09839 DUF2066 Uncharacteri 40.8 17 0.00045 13.6 7.3 30 193-226 74-103 (234)
331 cd00860 ThrRS_anticodon ThrRS 40.0 18 0.00046 13.5 5.0 75 47-133 1-75 (91)
332 COG5497 Predicted secreted pro 39.9 18 0.00046 13.5 3.2 29 218-246 28-61 (228)
333 KOG0290 consensus 39.7 18 0.00046 13.5 18.3 261 101-406 50-355 (364)
334 pfam09927 DUF2159 Predicted se 39.6 18 0.00046 13.5 4.4 44 123-166 60-119 (120)
335 COG5169 HSF1 Heat shock transc 39.0 17 0.00045 13.6 1.6 12 218-229 31-42 (282)
336 COG5563 Predicted integral mem 38.7 19 0.00048 13.4 17.9 199 219-419 122-332 (379)
337 PRK11548 hypothetical protein; 38.2 19 0.00049 13.4 2.1 35 11-46 1-38 (113)
338 PRK13486 bifunctional enteroba 38.2 19 0.00049 13.4 1.7 59 13-71 1-68 (696)
339 pfam06510 DUF1102 Protein of u 38.1 19 0.00049 13.3 2.1 14 360-373 141-154 (183)
340 PRK10641 btuB vitamin B12/coba 37.8 14 0.00036 14.2 1.0 59 12-71 1-68 (615)
341 PRK11397 dacD D-alanyl-D-alani 37.5 20 0.0005 13.3 2.0 12 62-73 63-74 (390)
342 COG0384 Predicted epimerase, P 37.2 17 0.00042 13.8 1.2 54 125-185 3-56 (291)
343 pfam10081 DUF2319 Predicted me 36.9 20 0.00051 13.2 5.6 202 94-322 205-427 (534)
344 KOG4640 consensus 36.8 20 0.00051 13.2 8.2 68 217-293 26-95 (665)
345 COG4775 Outer membrane protein 36.1 21 0.00053 13.1 4.3 74 11-86 1-79 (766)
346 KOG4476 consensus 35.4 21 0.00054 13.1 4.3 32 193-231 49-83 (248)
347 COG5037 TOS9 Gluconate transpo 35.4 21 0.00054 13.1 4.3 32 193-231 49-83 (248)
348 PRK13659 hypothetical protein; 33.9 22 0.00057 12.9 2.6 26 10-35 3-28 (112)
349 pfam05935 Arylsulfotrans Aryls 33.3 23 0.00058 12.9 24.6 244 169-426 106-440 (459)
350 TIGR01691 enolase-ppase 2,3-di 33.2 21 0.00053 13.1 1.2 39 95-148 118-156 (240)
351 COG3045 CreA Uncharacterized p 32.7 23 0.00059 12.8 1.9 41 13-57 3-49 (165)
352 PRK05697 flagellar basal body- 32.6 23 0.0006 12.8 1.5 25 148-172 100-124 (135)
353 TIGR03548 mutarot_permut cycli 32.2 24 0.0006 12.7 20.6 30 372-406 272-301 (323)
354 pfam12234 Rav1p_C RAVE protein 32.2 24 0.00061 12.7 9.8 58 169-233 35-96 (629)
355 COG5314 Conjugal transfer/entr 32.1 24 0.00061 12.7 3.7 42 1-43 1-42 (252)
356 pfam08329 ChitinaseA_N Chitina 31.8 24 0.00061 12.7 2.4 15 283-297 104-118 (133)
357 PRK00031 lolA outer-membrane l 31.4 24 0.00062 12.6 1.5 12 13-24 1-12 (201)
358 PRK10780 periplasmic chaperone 30.4 25 0.00065 12.5 2.1 17 13-29 1-17 (161)
359 pfam02402 Lysis_col Lysis prot 29.8 13 0.00032 14.6 -0.4 34 13-47 1-34 (46)
360 PRK09408 ompX outer membrane p 29.7 25 0.00063 12.6 1.1 22 13-34 1-23 (171)
361 PRK10954 periplasmic protein d 29.6 26 0.00067 12.4 2.5 35 13-47 1-38 (207)
362 KOG1057 consensus 29.5 26 0.00067 12.4 2.4 12 197-208 238-249 (1018)
363 TIGR02953 penta_MxKDx pentapep 29.0 27 0.00068 12.4 2.3 20 16-35 6-25 (89)
364 pfam11134 Phage_stabilize Phag 28.1 28 0.00071 12.3 9.4 28 199-230 133-160 (468)
365 PRK05303 flgI flagellar basal 27.8 28 0.00071 12.2 2.3 67 12-78 3-77 (368)
366 COG0445 GidA Flavin-dependent 26.5 29 0.00075 12.1 1.0 21 112-133 134-154 (621)
367 pfam04170 NlpE Uncharacterized 25.5 31 0.00079 12.0 7.1 18 300-317 10-27 (86)
368 PRK10884 putative signal trans 25.1 27 0.00069 12.4 0.6 21 15-35 3-23 (206)
369 PRK09619 flgD flagellar basal 25.0 31 0.0008 11.9 6.3 34 59-92 29-62 (220)
370 KOG2079 consensus 24.8 32 0.00081 11.9 5.9 82 193-280 111-197 (1206)
371 pfam05596 Taeniidae_ag Taeniid 24.5 11 0.00028 14.9 -1.4 15 54-68 41-55 (84)
372 PRK13879 conjugal transfer pro 24.2 33 0.00083 11.8 2.0 28 9-36 2-29 (254)
373 PRK10959 outer membrane protei 24.0 31 0.00078 12.0 0.7 22 13-35 1-22 (212)
374 COG5298 Uncharacterized protei 23.7 33 0.00085 11.8 1.2 23 13-35 1-23 (530)
375 COG2984 ABC-type uncharacteriz 23.7 33 0.00085 11.8 4.1 34 43-77 26-59 (322)
376 KOG0104 consensus 23.5 34 0.00086 11.7 2.6 16 37-53 35-50 (902)
377 PRK12789 flgI flagellar basal 23.2 34 0.00087 11.7 1.5 66 12-78 1-74 (367)
378 KOG2247 consensus 22.9 13 0.00032 14.5 -1.4 35 99-142 121-157 (615)
379 COG3017 LolB Outer membrane li 22.9 35 0.00088 11.6 2.2 60 158-235 116-179 (206)
380 COG3470 Tpd Uncharacterized pr 22.8 35 0.00088 11.6 2.9 45 12-56 2-49 (179)
381 pfam07622 DUF1583 Protein of u 22.3 35 0.0009 11.6 5.6 25 364-389 317-341 (400)
382 pfam09403 FadA Adhesion protei 22.2 35 0.0009 11.6 1.3 15 13-27 1-15 (126)
383 pfam07424 TrbM TrbM. This fami 21.9 36 0.00092 11.5 0.8 23 13-35 1-23 (189)
384 PRK08661 prolyl-tRNA synthetas 21.7 36 0.00093 11.5 8.4 19 63-81 49-67 (478)
385 KOG0285 consensus 21.6 36 0.00093 11.5 13.7 11 436-446 444-455 (460)
386 PRK11901 hypothetical protein; 21.6 36 0.00093 11.5 3.1 21 8-28 35-55 (329)
387 PRK10431 N-acetylmuramoyl-l-al 21.3 37 0.00094 11.4 3.2 18 10-27 2-19 (444)
388 COG1505 Serine proteases of th 21.1 37 0.00095 11.4 12.5 18 124-141 134-151 (648)
389 pfam10697 DUF2502 Protein of u 20.9 38 0.00096 11.4 2.1 14 27-41 10-23 (96)
390 PRK09967 putative outer membra 20.6 38 0.00097 11.4 1.8 27 155-181 105-131 (160)
391 TIGR02261 benz_CoA_red_D benzo 20.5 38 0.00098 11.3 1.8 62 120-186 9-71 (262)
392 PRK10159 outer membrane phosph 20.4 39 0.00099 11.3 2.3 22 13-35 1-22 (351)
393 pfam03058 Sar8_2 Sar8.2 family 20.0 39 0.001 11.3 1.4 26 6-35 2-27 (85)
394 COG3419 PilY1 Tfp pilus assemb 20.0 39 0.001 11.3 6.7 20 316-337 774-793 (1036)
No 1
>TIGR02800 propeller_TolB Tol-Pal system beta propeller repeat protein TolB; InterPro: IPR014167 Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. Escherichia coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggests that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear..
Probab=100.00 E-value=0 Score=899.69 Aligned_cols=412 Identities=32% Similarity=0.593 Sum_probs=385.7
Q ss_pred HHCCCCCEEEEEEECCCCCCCEEEEECCCCCCC--C------HHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCCCCCC
Q ss_conf 720213316999971586642004630567753--0------35789999998620175145508655034667611145
Q gi|254780548|r 27 FFPTSIHAFVKVATNSANYSPVSIAFTKFVSID--E------LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIP 98 (447)
Q Consensus 27 ~~~~~a~A~~~i~It~~~~~pi~IAv~~f~~~~--~------~~~~i~~ii~~DL~~SG~F~~i~~~~~~~~~~~~~~~~ 98 (447)
++...+.|+++|+|+++...++||||.+|.+.+ . ++++|++||++||++||+|++++...+++.+.....+
T Consensus 2 ~~~~~~~a~l~i~I~~g~~~~~PIAv~~F~~~~g~~~~~~~~~~~~~~~vi~~DL~~SG~F~~~~~~~~~~~~~~~~~~- 80 (439)
T TIGR02800 2 AVSTPAAAALTIEITGGGASALPIAVVPFGNEGGAAGSPPANLAEDIAEVIAADLRRSGLFSPVDKAGLPSPPISPSQV- 80 (439)
T ss_pred CCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCC-
T ss_conf 3224104100899914676465466858888887666662246777889999743028743203410266776654201-
Q ss_pred CHHH--HHHCCCCEEEEEEEEECCCCEEEEEEEEECCC-----CCC---EECCCCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 7788--74156218999997404662257899984155-----542---0000232337778899999998999997504
Q gi|254780548|r 99 RFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK-----DRK---QIIGKKFFSSPASWRKIAHTISDDIYQSITG 168 (447)
Q Consensus 99 ~f~~--W~~~gad~lv~G~i~~~~~~~~~v~~~L~dv~-----~~~---~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG 168 (447)
++.+ |+.+|+|+||+|++...++|++.|+|+||||. +++ ++++++|++..++||++||+|||+|||+|||
T Consensus 81 ~~~~~~W~~~Ga~~lV~G~v~~~~~G~~~v~~~L~D~~~g~~~~g~~~~~l~~~~~~~~~~~~R~~AH~iaD~iye~LTG 160 (439)
T TIGR02800 81 QPAASDWQALGADALVVGSVTPNGDGRYEVRFRLYDVVSGQNTKGTPGLQLLGKQYTVTASQLRRVAHRIADAIYEKLTG 160 (439)
T ss_pred CCCHHHHHHCCCCEEEEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHCC
T ss_conf 20048898579659999799970799269999999834144667787625542256534789887855888989998568
Q ss_pred CCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEE-CCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCC
Q ss_conf 4555544178875136764421001231145540268862-176402345576899848998503467644303771179
Q gi|254780548|r 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP-SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247 (447)
Q Consensus 169 ~~G~f~triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~-~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g 247 (447)
++|+|.||||||+++..++.++|+|+|||+||+|++.|++ ++++ ++||+|||||++|||+||++++ ++||++||.||
T Consensus 161 ~~G~F~tRIayV~~~~~~~~~~y~L~~aD~DG~N~~~~~~Gs~~p-~lsP~WSPDG~~lAYvsFe~~~-p~iyv~~L~TG 238 (439)
T TIGR02800 161 ERGAFSTRIAYVSKSGPKGGRRYELQVADYDGANPQTLLRGSREP-ILSPAWSPDGQKLAYVSFESKK-PEIYVQDLATG 238 (439)
T ss_pred CCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEEEEECCCCC-CCCCCCCCCCCEEEEEEEECCC-CEEEEEECCCC
T ss_conf 998565647999975689987428999646888614878147862-0134367899789999993896-57999921107
Q ss_pred CCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCC
Q ss_conf 71799743798524445515895567741378730389984047741100257764320255216747899723776533
Q gi|254780548|r 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327 (447)
Q Consensus 248 ~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~q 327 (447)
++ +.+++++|+|++|+|||||++|||+++++|++|||+||++++.++|||++++|||||+|||||++|+|||||+|.||
T Consensus 239 ~r-~~v~sf~G~n~AP~fSPDG~~LA~~lS~~Gn~~IY~~dl~~~~~~rlT~~~gIDTeP~wsPDG~~i~FtSDRgG~PQ 317 (439)
T TIGR02800 239 QR-EKVASFPGINGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGGQLTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQ 317 (439)
T ss_pred CE-EEEECCCCCEECCCCCCCCCEEEEEEECCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCC
T ss_conf 48-89871898177421769997999998068996469995889802466227988636418779988999987899812
Q ss_pred EEEEE---ECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCC--CEEEEEEECCCCCEEEEECCCCCCCCEECCCCC
Q ss_conf 15764---0256741112203530000468776888999971499--157999988999679966278755437887899
Q gi|254780548|r 328 LYVMQ---SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402 (447)
Q Consensus 328 iy~~~---~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~--~~~i~~~~~~g~~~~~lt~~~~~e~P~wSPDG~ 402 (447)
||+|+ ++||+++|||++|.+|. +|.|||||+.|||+++.+| .|+|++||++|+.+++||++++||+|+|||||+
T Consensus 318 IY~~~l~g~~gg~~~Rlt~~G~yN~-~p~~SPdG~~ia~~~~~~G~~~F~Ia~~~~~~~~~~~LT~~~~DEsPSfaPNG~ 396 (439)
T TIGR02800 318 IYRMNLNGADGGEARRLTFEGNYNA-SPSWSPDGKLIAFVHREGGGGVFNIAVMDLDGGDVQVLTDTGLDESPSFAPNGR 396 (439)
T ss_pred EEEECCCCCCCCCEEEEEECCCEEE-CCEECCCCCEEEEEEECCCCCEEEEEEEECCCCEEEEEECCCCCCCCEECCCCC
T ss_conf 7996157756785699984385565-257753777999997079986158999805888189835686689886853886
Q ss_pred EEEEEEEECCCC-CEEEEEEECCCCCEEECC-CCCCCCCCCCC
Q ss_conf 899999508987-337999988997147336-78873675316
Q gi|254780548|r 403 SLIFSRKKDGDT-GSKLYSIDLNGRNETLIN-TPAYASDPQWV 443 (447)
Q Consensus 403 ~i~f~~~~~g~~-~~~l~~~~~~G~~~~~~~-~~g~~~~P~Ws 443 (447)
+|+|+++++|+. ...|++|.+||+.+..++ ..|++++|+||
T Consensus 397 mi~y~~~~~g~~~~~~L~~vs~dG~~~~~l~~~~G~~~~PaWS 439 (439)
T TIGR02800 397 MILYATTRGGRGGTGVLALVSTDGRFRARLPSQQGEVREPAWS 439 (439)
T ss_pred EEEEEEEECCCCCCEEEEEEEECCEEEEECCCCCCCEECCCCC
T ss_conf 8999987089877618999911884743303678616246679
No 2
>PRK05137 tolB translocation protein TolB; Provisional
Probab=100.00 E-value=0 Score=884.79 Aligned_cols=426 Identities=47% Similarity=0.842 Sum_probs=398.3
Q ss_pred HHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCCCC----CCHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCC
Q ss_conf 99999999872021331699997158664200463056775----30357899999986201751455086550346676
Q gi|254780548|r 18 CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSI----DELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITN 93 (447)
Q Consensus 18 ~l~l~l~~~~~~~~a~A~~~i~It~~~~~pi~IAv~~f~~~----~~~~~~i~~ii~~DL~~SG~F~~i~~~~~~~~~~~ 93 (447)
.++++++.++++.+|+|+++|+||++...|+||||+||.++ ..++++|++||++||.+||+|++++++.+++.|..
T Consensus 8 ~~l~l~l~l~~~~~A~A~L~IeIt~g~~~~ipIAV~pF~~~~~~~~~l~~~i~~II~~DL~~SG~F~~l~~~~~l~~p~~ 87 (437)
T PRK05137 8 LALALALALLAAQPARALLRIDITKGNVEPLPIAIPDFLADTGGADELGADIAQVIAADLKRSGLFAPIDKAAFIEKITN 87 (437)
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCHHHCCCCCCC
T ss_conf 99999999873121431399999467677335799366578876413568899999977863889556484553467776
Q ss_pred CCCCCCHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 11145778874156218999997404662257899984155542000023233777889999999899999750445555
Q gi|254780548|r 94 PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173 (447)
Q Consensus 94 ~~~~~~f~~W~~~gad~lv~G~i~~~~~~~~~v~~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~f 173 (447)
.+..++|.+|+.+|+|+||+|+++..++|+++|+|+||||.++++|++++|.+..+++|++||++||+|||+|||++|+|
T Consensus 88 ~~~~~~f~dW~~lgad~LV~G~v~~~~~g~~~v~f~L~DV~~~~~l~g~~~~~~~~~~R~~aH~iaD~Iye~LTG~~G~F 167 (437)
T PRK05137 88 PDAAPRFADWKAINAQALVTGRVTKQGDGRLKVEFRLWDVFAGQQLLGQQFFTSPENWRRAAHKIADAIYERLTGEKGYF 167 (437)
T ss_pred CCCCCCHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEEECCCHHEECCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 45673747886569888999888987996499999999746401022608996689999999999999999860998655
Q ss_pred CCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEE
Q ss_conf 44178875136764421001231145540268862176402345576899848998503467644303771179717997
Q gi|254780548|r 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253 (447)
Q Consensus 174 ~triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~ 253 (447)
+||||||++++.++.+.|+|++||+||+|+++||.+++. +++|+|||||++|||+||++++ ++||++|+.+|++ +.+
T Consensus 168 ~TrIayVs~~g~~~~~~~~L~i~D~DG~n~~~l~~~~~~-ilsP~wSPdg~~iaY~S~~~~~-p~i~i~dl~tg~~-~~~ 244 (437)
T PRK05137 168 DTRIVYVAESGPKNARVKRLAIMDQDGANVRYLTDGSSL-VLTPRFSPTRQEITYMSYANGR-PRVYLLDLETGQR-ELV 244 (437)
T ss_pred CCEEEEEEECCCCCCCEEEEEEECCCCCCCEEECCCCCC-CCCCCCCCCCCEEEEEEECCCC-CEEEEEECCCCCE-EEC
T ss_conf 560899980178887457999988899985793047875-4243385899879999944998-5799999878988-850
Q ss_pred ECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEE
Q ss_conf 43798524445515895567741378730389984047741100257764320255216747899723776533157640
Q gi|254780548|r 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333 (447)
Q Consensus 254 ~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~ 333 (447)
+.++|++++|+|||||++||++++++|++|||++|+++++.+|||++++||++|+|||||++|+|+|||+|+||||+|++
T Consensus 245 ~~~~G~n~ap~~SPdG~~la~~ls~~Gn~dIy~~~l~~~~~~rlT~~~~idt~PswSPDG~~i~F~SdR~G~PQIY~~~~ 324 (437)
T PRK05137 245 GNFPGMTFAPRFSPDGQKVVMSLAQGGNTDIYTMDLRSRTTTRLTDTPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNA 324 (437)
T ss_pred CCCCCCEECCEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEC
T ss_conf 46899520530989998999999148995489998888835898606777778526799998999968999944999989
Q ss_pred CCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCCCCCEECCCCCEEEEEEEECCC
Q ss_conf 25674111220353000046877688899997149915799998899967996627875543788789989999950898
Q gi|254780548|r 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413 (447)
Q Consensus 334 ~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~~~~e~P~wSPDG~~i~f~~~~~g~ 413 (447)
+|++++|||+++.++ .+|+|||||++|||+++.++.|+|++++++|+.+++||++..||+|+|||||++|+|++..++.
T Consensus 325 ~g~~~~RiT~~~g~~-~~p~wSPdG~~iaf~~~~~g~~~I~~~~~~~~~~~~lT~~~~dEsPs~sPnG~~i~f~~~~~~~ 403 (437)
T PRK05137 325 DGSNPRRISFGGGRY-STPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGERILTSGFLDEGPTWAPNGRVLMFFRETPGS 403 (437)
T ss_pred CCCCEEEEECCCCCC-CCCCCCCCCCEEEEEEECCCEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCC
T ss_conf 999768865279865-7732678999899999529848899996799976980178988897699999999999840899
Q ss_pred CCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCC
Q ss_conf 7337999988997147336788736753165579
Q gi|254780548|r 414 TGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447 (447)
Q Consensus 414 ~~~~l~~~~~~G~~~~~~~~~g~~~~P~WsP~~~ 447 (447)
....||.+|++|+.+++++++|++++|+|||||.
T Consensus 404 g~~~l~~vd~~G~~~~~l~~~g~~~~PaWsP~l~ 437 (437)
T PRK05137 404 GGPKLYTVDLTGRNERPVPTPGDASDPAWSPLLP 437 (437)
T ss_pred CEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCC
T ss_conf 7279999927985588779998757887788898
No 3
>PRK03629 tolB translocation protein TolB; Provisional
Probab=100.00 E-value=0 Score=875.61 Aligned_cols=425 Identities=23% Similarity=0.386 Sum_probs=393.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCC--CCCCHHHHHHHHHHHHHHCCCCEEECCHHHCCCC
Q ss_conf 99999999999998720213316999971586642004630567--7530357899999986201751455086550346
Q gi|254780548|r 13 MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV--SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQK 90 (447)
Q Consensus 13 m~~~l~l~l~l~~~~~~~~a~A~~~i~It~~~~~pi~IAv~~f~--~~~~~~~~i~~ii~~DL~~SG~F~~i~~~~~~~~ 90 (447)
||+++.+++.|+. +++..++|+++|+||+|...|+||||+||+ +....+++|++||++||.+||+|++++++.+++.
T Consensus 1 mk~~~~~~f~~ll-l~~~~a~A~L~I~It~G~~~~~PIAV~pF~~~g~~~~~~~i~~II~~DL~rSG~F~~l~~~~~~~~ 79 (430)
T PRK03629 1 MKQALRVAFGFLI-LWASVLHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVAADLRNSGKFNPLDRARLPQQ 79 (430)
T ss_pred CCHHHHHHHHHHH-HHHHHHCEEEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCHHHCCCC
T ss_conf 9014888998999-875442237999993466773256992864478886467899999876875778150396785458
Q ss_pred CCCCCCCCCHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEECCCC--CCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 676111457788741562189999974046622578999841555--420000232337778899999998999997504
Q gi|254780548|r 91 ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168 (447)
Q Consensus 91 ~~~~~~~~~f~~W~~~gad~lv~G~i~~~~~~~~~v~~~L~dv~~--~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG 168 (447)
|....++ +|.+|+.+|+|+||+|+++..++|+++|+|+||||.. ++++.+++|.+..++||++||+|||+||++|||
T Consensus 80 p~~~~~v-~~~dWr~lgad~LV~G~v~~~~~g~~~v~f~L~DV~~~~g~~l~~~~~~~~~~~lR~~aH~isD~Iy~~lTG 158 (430)
T PRK03629 80 PGTAQEV-QPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTG 158 (430)
T ss_pred CCCCCCC-CHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9841345-855777608988999999976896199999999941662338644588458799999999999999998519
Q ss_pred CCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCC
Q ss_conf 45555441788751367644210012311455402688621764023455768998489985034676443037711797
Q gi|254780548|r 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248 (447)
Q Consensus 169 ~~G~f~triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~ 248 (447)
++|+|+||||||+++++ ++.+|+|++||+||+|+++|+++.+ ++++|+|||||++|||+||+++. ++||++|+.+|+
T Consensus 159 ~~G~F~TrIayV~~~~~-~~~~~~L~i~D~DG~N~~~l~~~~~-~ilsP~wSPdg~~iaY~S~~~g~-p~iyi~dL~tg~ 235 (430)
T PRK03629 159 IKGAFRTRIAYVVQTNG-GQFPYELRVSDYDGYNQFVVHRSPQ-PLMSPAWSPDGSKLAYVTFESGR-SALVIQTLANGA 235 (430)
T ss_pred CCCCCCCEEEEEEECCC-CCCEEEEEEECCCCCCCEEEECCCC-CEEEEEECCCCCEEEEEEECCCC-CEEEEEECCCCC
T ss_conf 97541015999995179-9742799997788998688105897-20542083899989999822799-639999866784
Q ss_pred CEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCE
Q ss_conf 17997437985244455158955677413787303899840477411002577643202552167478997237765331
Q gi|254780548|r 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328 (447)
Q Consensus 249 ~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qi 328 (447)
+ +.+++++|++++|+|||||++||++++++|++|||++|+++++.+|||++++||++|+|||||++|+|+|||+|+|||
T Consensus 236 ~-~~~~~~~g~n~aP~~SPDG~~la~sls~~Gn~dIY~~dl~~~~~~rLT~~~~idt~PswSPDG~~I~F~SdR~G~PQI 314 (430)
T PRK03629 236 V-RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQV 314 (430)
T ss_pred E-EEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCCEECCCCCEEEEEECCCCCCEE
T ss_conf 7-993144676667659989989999995689805999999999578987426878881284788889999789999619
Q ss_pred EEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCCCCCEECCCCCEEEEEE
Q ss_conf 57640256741112203530000468776888999971499157999988999679966278755437887899899999
Q gi|254780548|r 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408 (447)
Q Consensus 329 y~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~~~~e~P~wSPDG~~i~f~~ 408 (447)
|+|+++|++++|||+++.++ ..|+|||||++|||+++.+|.|+|++++++++.+++||+++.||+|+|||||++|+|++
T Consensus 315 Y~m~~~g~~~~RiTf~g~~n-~~p~wSPdG~~Iaf~~~~~g~f~I~~~d~~~~~~~~lt~~~~dEsPswsPnG~~Ivf~~ 393 (430)
T PRK03629 315 YKVNINGGAPQRITWEGSQN-QDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSS 393 (430)
T ss_pred EEEECCCCCEEEEECCCCCC-CCCCCCCCCCEEEEEEECCCEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 99989999889863269975-67636678998999993298379999968999779802799888976999998899998
Q ss_pred EECCCCCEEEEEEECCCCCEEEC-CCCCCCCCCCCCCCC
Q ss_conf 50898733799998899714733-678873675316557
Q gi|254780548|r 409 KKDGDTGSKLYSIDLNGRNETLI-NTPAYASDPQWVGFM 446 (447)
Q Consensus 409 ~~~g~~~~~l~~~~~~G~~~~~~-~~~g~~~~P~WsP~~ 446 (447)
.++|+. .||.|++||+..+.+ .++|++++|+|||||
T Consensus 394 ~~~g~~--~L~~vs~dG~~~~rl~~~~g~~~~PaWsP~l 430 (430)
T PRK03629 394 SQGMGS--VLNLVSTDGRFKARLPATDGQVKFPAWSPYL 430 (430)
T ss_pred CCCCCE--EEEEEECCCCEEEECCCCCCCCCCCCCCCCC
T ss_conf 469962--8999992798048765899876587778899
No 4
>PRK02889 tolB translocation protein TolB; Provisional
Probab=100.00 E-value=0 Score=871.44 Aligned_cols=426 Identities=26% Similarity=0.441 Sum_probs=397.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCHHHCC
Q ss_conf 77679999999999999872021331699997158664200463056775303578999999862017514550865503
Q gi|254780548|r 9 EELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFK 88 (447)
Q Consensus 9 ~~~~m~~~l~l~l~l~~~~~~~~a~A~~~i~It~~~~~pi~IAv~~f~~~~~~~~~i~~ii~~DL~~SG~F~~i~~~~~~ 88 (447)
+.||||+.+.++++++.++++.+|+|+++|+||++...|+||||+||.+++.++++|++||++||++||+|+++++..++
T Consensus 1 ~~~~~~l~~~~~~~~~l~~~~~~A~A~L~IeIt~g~~~~~pIAV~pF~~~~~~~~~i~~II~~DL~~SG~F~~l~~~~~~ 80 (430)
T PRK02889 1 MSLMTKLGLRALVASCLIAAGGAAHAQLNVEITGVGATQFPIATANFANEAGLPQQVTSIVRADLARSGKFSNVDAGGAP 80 (430)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCC
T ss_conf 91799899999999999862102027899999357887072799065788875067999999888728884005843478
Q ss_pred CCCCCCCCCCCHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 46676111457788741562189999974046622578999841555420000232337778899999998999997504
Q gi|254780548|r 89 QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168 (447)
Q Consensus 89 ~~~~~~~~~~~f~~W~~~gad~lv~G~i~~~~~~~~~v~~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG 168 (447)
.. ....++|.+|+.+|+|+||+|+++..++|+++|+|+||||.++++|.+++|.+..++||++||+|||+|||+|||
T Consensus 81 ~~---~~~~i~f~~W~~lgad~lv~G~v~~~~~g~~~v~~~L~Dv~~~~~l~g~~~~~~~~~~R~~aH~iaD~Iy~~lTG 157 (430)
T PRK02889 81 VP---ETASVDLGAWKAKGADAFVAGSVNREPNGQYEVRFRLYDTVKQQSLGGLSLTVTEDQLRATAHKIADYIYEKLTG 157 (430)
T ss_pred CC---CCCCCCHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99---878868689886089899999999778984899999997466618743389958899899999999999998618
Q ss_pred CCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCC
Q ss_conf 45555441788751367644210012311455402688621764023455768998489985034676443037711797
Q gi|254780548|r 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248 (447)
Q Consensus 169 ~~G~f~triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~ 248 (447)
++|+|+||||||++.++ +|+|++||+||+|+++||++++ ++++|+|||||++|||+||+++. ++||++|+.+|+
T Consensus 158 ~~G~F~trIayV~~~~~----~~~l~i~D~DG~n~~~lt~~~~-~~lsP~wSPdg~~iaYvS~~~g~-p~iyi~dl~tg~ 231 (430)
T PRK02889 158 VRGVFATRLSYVIKTGN----RYQLQISDSDGQNAQIALRSTE-PIISPAWSPDGTKVAYVSFESKK-PVVYVHDLATGR 231 (430)
T ss_pred CCCCCCCEEEEEECCCC----CEEEEEECCCCCCCEEECCCCC-EEEEEEECCCCCEEEEEEECCCC-CEEEEEECCCCC
T ss_conf 98542026999985798----1589997887888469216896-45851087999989999943998-604999457882
Q ss_pred CEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCE
Q ss_conf 17997437985244455158955677413787303899840477411002577643202552167478997237765331
Q gi|254780548|r 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328 (447)
Q Consensus 249 ~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qi 328 (447)
+ +.+++++|++++|+|||||++|||+++++|++|||++|++++..+|||+++++|++|+|||||++|+|+|||+|+|||
T Consensus 232 ~-~~i~~~~g~n~aP~~SPDG~~la~sls~~Gn~dIy~~~l~~~~~~rLT~~~~idt~PswSPDG~~I~FtSDR~G~PQI 310 (430)
T PRK02889 232 R-YVVSNQKGNNSAPAWSPDGRKLAVALSLDGNTQIYLVNADGSGLRRLTRSSGIDTEPFFSPDGRWIYFTSDRGGAPQI 310 (430)
T ss_pred E-EEEECCCCCCCCCEECCCCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCEEECCCCCEEEEEECCCCCCCE
T ss_conf 7-897226996657319999988999987799814899999999478850289988765688899989999589999618
Q ss_pred EEEEECC---CCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCCCCCEECCCCCEEE
Q ss_conf 5764025---6741112203530000468776888999971499157999988999679966278755437887899899
Q gi|254780548|r 329 YVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405 (447)
Q Consensus 329 y~~~~~g---~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~~~~e~P~wSPDG~~i~ 405 (447)
|+|+++| |+++|||+++.++ .+|+|||||++|||+++.++.|+|+++|++++.+++||+++.||+|+|||||++|+
T Consensus 311 Y~m~~~G~~~g~~~RiT~~g~yn-~~P~wSPdG~~Iaf~~~~~g~f~I~v~d~~~~~~~~LT~~~~dE~PswsPnG~~i~ 389 (430)
T PRK02889 311 YRMPASGESAGAAQRVTFEGSYN-VSPRISPDGKLLAYISRTGGGFKLYVQDLATGQATALTDTTRDESPSFAANGRYIL 389 (430)
T ss_pred EEEECCCCCCCCEEEECCCCCCC-CCCEECCCCCEEEEEEEECCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEE
T ss_conf 99968986546347740478886-77207689998999992589168999979999879810688887976999997999
Q ss_pred EEEEECCCCCEEEEEEECCCCCEEECCC-CCCCCCCCCCCCCC
Q ss_conf 9995089873379999889971473367-88736753165579
Q gi|254780548|r 406 FSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQWVGFMD 447 (447)
Q Consensus 406 f~~~~~g~~~~~l~~~~~~G~~~~~~~~-~g~~~~P~WsP~~~ 447 (447)
|+++++|+ .+||.|+++|+.++.+++ .|++++|+|||||.
T Consensus 390 yss~~~G~--~~L~~v~~dG~~~~~l~~~~G~~~~PaWsP~l~ 430 (430)
T PRK02889 390 YATQSGGR--SVLAAVSSDGRTRQILSVQGGDVREPSWGPFMQ 430 (430)
T ss_pred EEEEECCC--EEEEEEECCCCEEEECCCCCCCCCCCCCCCCCC
T ss_conf 99940995--699999877863588668998767888646669
No 5
>PRK04792 tolB translocation protein TolB; Provisional
Probab=100.00 E-value=0 Score=873.83 Aligned_cols=426 Identities=25% Similarity=0.430 Sum_probs=388.5
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCC--CCCCHHHHHHHHHHHHHHCCCCEEECCHHHCCC
Q ss_conf 799999999999998720213316999971586642004630567--753035789999998620175145508655034
Q gi|254780548|r 12 NMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV--SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89 (447)
Q Consensus 12 ~m~~~l~l~l~l~~~~~~~~a~A~~~i~It~~~~~pi~IAv~~f~--~~~~~~~~i~~ii~~DL~~SG~F~~i~~~~~~~ 89 (447)
|||+++ +.+++++++++..|+|+++|+||+|...|+||||+||. +...++++|++||++||.+||+|++++++.+++
T Consensus 1 M~k~~~-~~l~lll~~~s~~A~A~L~IeIt~G~~~~~PIAV~pF~~~g~~~~~~~i~~II~~DL~rSG~F~~l~~~~~~~ 79 (450)
T PRK04792 1 MLKRLI-LGLFVLLLSFSQVANAALELVITDGIDSARPIAIVPFKWEGEGKLPTDISAVIASDLQRSGKFSPVPTSKMPQ 79 (450)
T ss_pred CCHHHH-HHHHHHHHHHHHHHEEEEEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCHHHCCC
T ss_conf 938999-9999999986575202499999547777425499375456874325799999998876087855259667445
Q ss_pred CCCCCCCCCCHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCE---------------------ECCCCCCCCH
Q ss_conf 6676111457788741562189999974046622578999841555420---------------------0002323377
Q gi|254780548|r 90 KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ---------------------IIGKKFFSSP 148 (447)
Q Consensus 90 ~~~~~~~~~~f~~W~~~gad~lv~G~i~~~~~~~~~v~~~L~dv~~~~~---------------------i~~~~~~~~~ 148 (447)
.|....+ ++|.+|+.+|+|+||+|+++..++|+++|+|+||||.++++ ++.+.+.+..
T Consensus 80 ~P~~~~~-v~f~dWr~lgad~LV~G~v~~~~~g~~~V~f~L~DV~~g~~~~g~~~~~~~~g~~v~~~~~~~~~~~~~~~~ 158 (450)
T PRK04792 80 TPYSESE-INFDAWTKMGVDALLTGSVTQNAEGKYVVNYQLVDVVRGQLTKGQSKALSDDGQLVLSKDHVLFNKVATVSA 158 (450)
T ss_pred CCCCCCC-CCHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEECCCH
T ss_conf 8885478-377897643898899999998899749999999980165104553212244432112321000020210477
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEE
Q ss_conf 78899999998999997504455554417887513676442100123114554026886217640234557689984899
Q gi|254780548|r 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228 (447)
Q Consensus 149 ~~~R~~ah~~ad~i~~~ltG~~G~f~triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay 228 (447)
.+||++||+|||+||++|||++|+|+||||||++.. ++++.|+|++||+||+|+++||.+++ ++++|+|||||++|||
T Consensus 159 ~~~R~~aH~isD~Iy~~lTG~~G~F~trIayV~~~~-~~~~~~~L~i~D~DG~N~~~lt~~~~-~~lsP~wSPdg~~iaY 236 (450)
T PRK04792 159 PRMREYAHRISDLVYEQLTGERGAFLTRIAYVVVND-KDKYPYQLRVADYDGYNERLVLRSKQ-PLMSPAWSPDGKKLAY 236 (450)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECC-CCCCEEEEEECCCCCCCCEECCCCCC-EEEEEEECCCCCEEEE
T ss_conf 899999999999999997099753010499999348-88863799973678888179027997-2774338589998999
Q ss_pred EEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEE
Q ss_conf 85034676443037711797179974379852444551589556774137873038998404774110025776432025
Q gi|254780548|r 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308 (447)
Q Consensus 229 ~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~ 308 (447)
+||++++ ++||++|+.+|++ +.+++++|++++|+|||||++||++++++|++|||++|+++++.+|||++++||++|+
T Consensus 237 vs~~~g~-p~iyi~dl~tg~~-~~i~~~~g~n~aP~fSPdG~~la~~ls~~G~~dIY~~dl~~~~~~rlT~~~~idt~Ps 314 (450)
T PRK04792 237 VSFQNGQ-AEIFIMNIYTGKR-EKITSYPRHNGAPRFSPDGKKLALVLSKTGSLQVYTLDLKTRKLTQITRGRSNNTEPF 314 (450)
T ss_pred EEECCCC-CEEEEEECCCCCE-EEEECCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCEEEECCCCCCCCCCC
T ss_conf 9953998-5799998878978-8740157766578708999889999836997348999889994587125788787700
Q ss_pred EECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEC
Q ss_conf 52167478997237765331576402567411122035300004687768889999714991579999889996799662
Q gi|254780548|r 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388 (447)
Q Consensus 309 ~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~ 388 (447)
|||||++|+|+|||+|+||||+|+++|++++|||+++.++ ..|+|||||++|||+++.++.|+|+++|++++.+++||+
T Consensus 315 wSPDG~~i~F~SdR~G~PQIY~~~~~g~~~~RlT~~g~~n-~~p~~SPdG~~Iaf~~~~~g~f~I~v~~~~~~~~~~lt~ 393 (450)
T PRK04792 315 WHPDGKSLIFTSDRGGKPQIYRVNLSDGSTKRLTWQGSQN-LGGQITPDGRFLVMVNRSDSGFNLAKQDLETGAVQVLTK 393 (450)
T ss_pred CCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCC-CCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCEEEECC
T ss_conf 8789988999907899961899988999613432369987-676187889989999815890589999479997698027
Q ss_pred CCCCCCCEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEEC-CCCCCCCCCCCCCCC
Q ss_conf 7875543788789989999950898733799998899714733-678873675316557
Q gi|254780548|r 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI-NTPAYASDPQWVGFM 446 (447)
Q Consensus 389 ~~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~~~-~~~g~~~~P~WsP~~ 446 (447)
++.||+|+|||||++|+|++.++|.. .||.+++||+..+.+ .++|++++|+|||||
T Consensus 394 ~~~dEsPswsPnGr~ivf~s~~~g~~--~l~~vs~dG~~~~~l~~~~g~~~~PaWsP~l 450 (450)
T PRK04792 394 TLLDESPSIAPNGGMVIYSSIYNKKN--VLSMVSIDGRFKARLPATNGRVRAPAWSPFL 450 (450)
T ss_pred CCCCCCCCCCCCCCEEEEEECCCCCC--EEEEEEECCCEEEECCCCCCCCCCCCCCCCC
T ss_conf 98787977999986899998679970--8999993488037756899875688876889
No 6
>PRK04922 tolB translocation protein TolB; Provisional
Probab=100.00 E-value=0 Score=870.16 Aligned_cols=424 Identities=27% Similarity=0.468 Sum_probs=391.0
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCCCCC---CHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCC
Q ss_conf 99999999998720213316999971586642004630567753---035789999998620175145508655034667
Q gi|254780548|r 16 NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID---ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKIT 92 (447)
Q Consensus 16 ~l~l~l~l~~~~~~~~a~A~~~i~It~~~~~pi~IAv~~f~~~~---~~~~~i~~ii~~DL~~SG~F~~i~~~~~~~~~~ 92 (447)
.|.++++|++++.+.+++|+++|+||+|...|+||||+||...+ ..+++|++||++||.+||+|++++++.+++.|.
T Consensus 7 ~~~~~~~~~~~~~a~~a~a~L~IeIt~G~~~~~pIAV~pF~~~~~~~~~~~~i~~II~~DL~~SG~F~~l~~~~~~~~p~ 86 (439)
T PRK04922 7 WLAALTALLLPLSALAQQQGLTIDIVGGSASATPIAVVPMPYQGSGTAPQTDVSAVVSADLDRSGQFRTLPAAQIVEKPT 86 (439)
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCC
T ss_conf 99999999998778861683699993577770506993756578765503649999986577272744159678545888
Q ss_pred CCCCCCCHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 61114577887415621899999740466225789998415554200002323377788999999989999975044555
Q gi|254780548|r 93 NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172 (447)
Q Consensus 93 ~~~~~~~f~~W~~~gad~lv~G~i~~~~~~~~~v~~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~ 172 (447)
...+ ++|.+|+.+|+|+||+|+++..++|+++|+|+||||.+++++.+++|.+..++||++||+|||+|||+|||++|+
T Consensus 87 ~~~~-i~f~~Wr~lgad~LV~G~v~~~g~g~~~v~frL~DV~~~~~l~g~~~~~~~~~~R~~aH~isD~Iye~LTG~~G~ 165 (439)
T PRK04922 87 RGTE-VQFQTWRALKQNYIVVGRVMDAGEGAYRVEYELFDVAKGERMLGLAMTARANAMRDVAHQMADAIYEKITGVRGA 165 (439)
T ss_pred CCCC-CCHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEEECCCCCEEECCEEECCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 6477-386898762999999999998889718999999986687486210576088998999999999999974099874
Q ss_pred CCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEE
Q ss_conf 54417887513676442100123114554026886217640234557689984899850346764430377117971799
Q gi|254780548|r 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252 (447)
Q Consensus 173 f~triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~ 252 (447)
|+||||||++++.+++++|+|++||+||+|+++||++++ +++||+|||||++|||+||+++. ++||++|+.+|++ +.
T Consensus 166 F~TrIayV~~~g~~~~~~~~L~i~D~DG~N~~~lt~~~~-~ilsP~wSPdg~~iaYvS~~~g~-p~iyi~dl~tg~~-~~ 242 (439)
T PRK04922 166 FWTRIAYVTASGSGGAMRYALMVADSDGYNPQTIVRSAE-PLLSPNWSPDGKKLAYVSFERGN-SSIYLQDIATGAR-EL 242 (439)
T ss_pred EEEEEEEEEECCCCCCCEEEEEEECCCCCCEEEECCCCC-CEEEEEECCCCCEEEEEECCCCC-CCEEEEECCCCCE-EE
T ss_conf 023699998017888725999985778997189226898-26842476899889999802798-7479998678857-85
Q ss_pred EECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEE
Q ss_conf 74379852444551589556774137873038998404774110025776432025521674789972377653315764
Q gi|254780548|r 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332 (447)
Q Consensus 253 ~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~ 332 (447)
+++++|++++|+|||||++|||+++++|++|||++|++++..+|||++++||++|+|||||++|+|+|||+|+||||+|+
T Consensus 243 l~~~~g~n~aP~~SPDG~~ia~sls~~Gn~dIy~~~l~~~~~~rlT~~~~idt~Ps~sPDG~~i~F~SdR~G~pQIY~~~ 322 (439)
T PRK04922 243 VSSFRGINGAPSFSPDGRRLALALSRSGNPEIYVMDLGSKQLTQLTNHFGIDTEPTWAPDGGSIYFTSDRGGRPQIYQVA 322 (439)
T ss_pred CCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCCCCCEEECCCCCEEEEEECCCCCCEEEEEE
T ss_conf 04578875477698999199999916997102899689985256411788667714877988899970689995499998
Q ss_pred ECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCC--CEEEEECCCCCCCCEECCCCCEEEEEEEE
Q ss_conf 0256741112203530000468776888999971499157999988999--67996627875543788789989999950
Q gi|254780548|r 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--QERLLVEDSNLQAPTWSPSGRSLIFSRKK 410 (447)
Q Consensus 333 ~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~--~~~~lt~~~~~e~P~wSPDG~~i~f~~~~ 410 (447)
++|++++|||+++.|| ..|+|||||++|||+++.++.|+|++||++++ .+++||++..||+|+|||||++|+|++.+
T Consensus 323 ~~g~~~~RlT~~g~yn-~~p~wSPdG~~Iaf~~~~~g~f~I~v~d~~~g~~~~~~lt~g~~dEsPswsPnG~~ivf~s~~ 401 (439)
T PRK04922 323 ASGGSANRVTFQGNYN-ATASVSFDGKKIAVAQGSGNTYRIAMMDRSLGSPSWSTLSPGSLDESPSFAPNASMVLYAARE 401 (439)
T ss_pred CCCCCEEEEECCCCCC-CCEEECCCCCEEEEEEEECCEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECC
T ss_conf 9999647875579988-880299899989999831884899999467897448980378877798599999699999854
Q ss_pred CCCCCEEEEEEECCCCCEEEC-CCCCCCCCCCCCCCC
Q ss_conf 898733799998899714733-678873675316557
Q gi|254780548|r 411 DGDTGSKLYSIDLNGRNETLI-NTPAYASDPQWVGFM 446 (447)
Q Consensus 411 ~g~~~~~l~~~~~~G~~~~~~-~~~g~~~~P~WsP~~ 446 (447)
+|+ .+||+|+++|+..+.+ ..+|++++|+||||+
T Consensus 402 ~g~--~~L~~v~~dG~~~~~l~~~~g~~~~PaWsPf~ 436 (439)
T PRK04922 402 GGR--GVLYAVSADARVRQRLVLADGDVREPAWGPYR 436 (439)
T ss_pred CCC--EEEEEEECCCCCEEECCCCCCCCCCCCCCCCC
T ss_conf 996--58999985788237735899870698877871
No 7
>PRK00178 tolB translocation protein TolB; Provisional
Probab=100.00 E-value=0 Score=861.87 Aligned_cols=426 Identities=27% Similarity=0.484 Sum_probs=391.5
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCCCC--CCHHHHHHHHHHHHHHCCCCEEECCHHHCC
Q ss_conf 679999999999999872021331699997158664200463056775--303578999999862017514550865503
Q gi|254780548|r 11 LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSI--DELGGKVSEVVSKDLQRSDVFNLISQDSFK 88 (447)
Q Consensus 11 ~~m~~~l~l~l~l~~~~~~~~a~A~~~i~It~~~~~pi~IAv~~f~~~--~~~~~~i~~ii~~DL~~SG~F~~i~~~~~~ 88 (447)
+.|+++++++++| +++.+++|+++|+||++...|+||||+||.+. ..+++++++||++||.+||+|++++++.++
T Consensus 2 ~~l~~~~~l~~~l---~~~~~a~A~l~I~It~g~~~~ipIAI~pF~~~~~~~~~~~i~~iI~~DL~~sG~F~~l~~~~~~ 78 (433)
T PRK00178 2 IKLKRIALLVLCL---LAGGAAAAELNIEITSGSDRAIPIAVVPFGWQGGSVLPEDMAQIIGNDLRNSGYFEPIPRQNMI 78 (433)
T ss_pred CCHHHHHHHHHHH---HHHHHHCEEEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCHHHCC
T ss_conf 0179999999999---8767622039999934777604069857666687622489999999888628885524835524
Q ss_pred CCCCCCCCCCCHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 46676111457788741562189999974046622578999841555420000232337778899999998999997504
Q gi|254780548|r 89 QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168 (447)
Q Consensus 89 ~~~~~~~~~~~f~~W~~~gad~lv~G~i~~~~~~~~~v~~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG 168 (447)
+.|....+ ++|.+|+.+|+|+||+|++...+ ++++|+|+||||.++++|++++|.+..++||++||+|||+||++|||
T Consensus 79 ~~p~~~~~-i~f~~W~~lgad~Lv~G~i~~~g-g~~~v~~~L~DV~~~~~l~g~~~~~~~~~~R~~aH~iaD~Iy~~lTG 156 (433)
T PRK00178 79 SLPSQASE-VIFRDWKALGAQYVMVGNIVPAG-GRLQVQYALFNVATEQQVLTGSVSGSTDQLRDMAHYIADQSFEKLTG 156 (433)
T ss_pred CCCCCCCC-CCHHHHHHCCCCEEEEEEEEECC-CEEEEEEEEEECCCCEEEECCEEEECHHHHHHHHHHHHHHHHHHHHC
T ss_conf 68885457-57568775098789998799459-97999999997145207603269957899899999999999998309
Q ss_pred CCCCCCCCEEEEEECCC-CCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCC
Q ss_conf 45555441788751367-64421001231145540268862176402345576899848998503467644303771179
Q gi|254780548|r 169 EKGDFNSRILFVSESVV-SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247 (447)
Q Consensus 169 ~~G~f~triafv~~~~~-~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g 247 (447)
++|+|+||||||++++. ++++.++|++||+||+|+++||++++ +++||+|||||++|||+||+++. ++||++|+.+|
T Consensus 157 ~~G~F~trIayV~~~~~~~~~~~~~l~i~D~DG~n~~~lt~~~~-~~lsP~wSPdg~~iaY~s~~~~~-p~i~i~dl~tg 234 (433)
T PRK00178 157 IKGAFSTRILYVTAERFSGNNTRYTLQRSDYDGARAVTLLQSRE-PILSPRWSPDGKRIAYVSFEQKR-PRIFVQNLDTG 234 (433)
T ss_pred CCCCEEEEEEEEEEECCCCCCCEEEEEEECCCCCCEEECCCCCC-CEECCEECCCCCEEEEEEECCCC-CEEEEEECCCC
T ss_conf 97430224999994448888625999984688997279236897-46700075899889999933898-63799987778
Q ss_pred CCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCC
Q ss_conf 71799743798524445515895567741378730389984047741100257764320255216747899723776533
Q gi|254780548|r 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327 (447)
Q Consensus 248 ~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~q 327 (447)
++ +.+++++|++++|+|||||++|||+++++|++|||++|++++..+|||++++||++|+|||||++|+|+|||+|+||
T Consensus 235 ~~-~~l~~~~g~~~~p~~SPdG~~ia~~ls~~g~~dIy~~~~~~~~~~rlT~~~~idt~Ps~spDG~~i~F~SdR~G~pQ 313 (433)
T PRK00178 235 RR-EQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLRRLTNHWAIDTEPFWGKDGRTIYFTSDRGGKPQ 313 (433)
T ss_pred CE-EEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCEEEEECCCCCCCCEEECCCCCEEEEECCCCCCCE
T ss_conf 27-98541688566752789998999998069970058998799950476327875565316468988999637899945
Q ss_pred EEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCC--CEEEEEEECCCCCEEEEECCCCCCCCEECCCCCEEE
Q ss_conf 157640256741112203530000468776888999971499--157999988999679966278755437887899899
Q gi|254780548|r 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405 (447)
Q Consensus 328 iy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~--~~~i~~~~~~g~~~~~lt~~~~~e~P~wSPDG~~i~ 405 (447)
||+|+++|++++|||+++.++ ..|+|||||++|||+++.+| .|+|+++|++++.+++||+++.||+|+|||||++|+
T Consensus 314 IY~~~~~g~~~~RlT~~g~yn-~~P~wSPdG~~Iaf~~~~~g~~~f~I~~~d~~~g~~~~lt~~~~dE~Ps~sPnG~~i~ 392 (433)
T PRK00178 314 IYKMDVNGGRAERVTFVGNYN-ANPKLSADEKTLVMVHRQDGFTNFHVAAQDLQRGSVRILTETSLDESPTVAPNGTMLI 392 (433)
T ss_pred EEEEECCCCCEEEEECCCCCC-CCCEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCEEE
T ss_conf 999989999667721358877-7710868999899999527854379999958999879866899887975999985999
Q ss_pred EEEEECCCCCEEEEEEECCCCCEEECCC-CCCCCCCCCCCCCC
Q ss_conf 9995089873379999889971473367-88736753165579
Q gi|254780548|r 406 FSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQWVGFMD 447 (447)
Q Consensus 406 f~~~~~g~~~~~l~~~~~~G~~~~~~~~-~g~~~~P~WsP~~~ 447 (447)
|+++++|. .+||.|+++|+.++.+++ +|++++|+||||||
T Consensus 393 f~~~~~g~--~~L~~~~~dG~~~~~l~~~~g~~~~P~WsP~l~ 433 (433)
T PRK00178 393 YATRQQGR--GVLMLVSINGRVRLPLPTAQGEVREPSWSPYLN 433 (433)
T ss_pred EEEECCCC--EEEEEEECCCCEEEECCCCCCCCCCCCCCCCCC
T ss_conf 99913997--799999867973687558998777887677779
No 8
>PRK01742 tolB translocation protein TolB; Provisional
Probab=100.00 E-value=0 Score=838.40 Aligned_cols=422 Identities=23% Similarity=0.364 Sum_probs=388.3
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCHHHCCC
Q ss_conf 76799999999999998720213316999971586642004630567753035789999998620175145508655034
Q gi|254780548|r 10 ELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89 (447)
Q Consensus 10 ~~~m~~~l~l~l~l~~~~~~~~a~A~~~i~It~~~~~pi~IAv~~f~~~~~~~~~i~~ii~~DL~~SG~F~~i~~~~~~~ 89 (447)
|+|||.++.++++|++++++..|+|+++|+||+|...|+||||+||.+++.++++|++||++||.+||+|++++++.+++
T Consensus 1 m~m~~~~~~~~~~l~~~~~~~~a~a~L~I~It~G~~~~~pIAi~pF~~~~~~~~~i~~vI~~DL~~SG~F~~i~~~~~~~ 80 (430)
T PRK01742 1 MKLLKRLVSVFAVLFAVISNAFAGDEVRIVIDEGVDGARPIAVVPFKWNGSAPEDIAKIIAADLRNSGKFNPIAVSQMPQ 80 (430)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCC
T ss_conf 91699999999999999877850575599994576774045992536789766789999987776084726259667445
Q ss_pred CCCCCCCCCCHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEECCCC-----CCEECCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 6676111457788741562189999974046622578999841555-----42000023233777889999999899999
Q gi|254780548|r 90 KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD-----RKQIIGKKFFSSPASWRKIAHTISDDIYQ 164 (447)
Q Consensus 90 ~~~~~~~~~~f~~W~~~gad~lv~G~i~~~~~~~~~v~~~L~dv~~-----~~~i~~~~~~~~~~~~R~~ah~~ad~i~~ 164 (447)
.|.+..+ ++|.+|+.+|+|+||+|++...++ .++|+|+||||.+ ++++.+++|.+..+++|++||+|||+|||
T Consensus 81 ~p~~~~~-v~~~~W~~lga~~LV~G~v~~~~~-~~~v~f~L~Dv~~~~~~~g~~l~~~~~~~~~~~~R~~aH~iaD~Iye 158 (430)
T PRK01742 81 RPTSASE-VNPEAWSNLGIDAVVVGQVTPSGN-GYSIAYQLVDTVGASGTAGTVLMQNSYTVTNKWLRYGAHTVSDEVFE 158 (430)
T ss_pred CCCCCCC-CCHHHHHHCCCCEEEEEEEEECCC-EEEEEEEEEEEECCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHH
T ss_conf 8985033-497788743999999998997599-17999999995101246652886416615889989888999999999
Q ss_pred HHCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEE
Q ss_conf 75044555544178875136764421001231145540268862176402345576899848998503467644303771
Q gi|254780548|r 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244 (447)
Q Consensus 165 ~ltG~~G~f~triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~ 244 (447)
+|||++|+|+||||||+++++ +++.|+|++||+||+|+++||++++ ++++|+|||||++|||+||++++ ++||++|+
T Consensus 159 ~lTG~~G~F~trIayV~~~~~-~~~~~~l~i~D~DG~N~~~l~~~~~-~ilsP~wSPdg~~iaY~S~~~~~-~~iyi~dl 235 (430)
T PRK01742 159 KLTAIRGAFRTRIAYVVQKNG-GSQPYEVRVADYDGYNQFIVNRSAQ-PIMSPAWSPDGQRLAYVSFENKK-SQLVVQDL 235 (430)
T ss_pred HHCCCCCCCEEEEEEEEECCC-CCCEEEEEECCCCCCCEEECCCCCC-CEEEEEECCCCCEEEEEEECCCC-CEEEEEEC
T ss_conf 862987431004999982179-9843799962678998088535797-25720185899889999904999-78999985
Q ss_pred CCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCC
Q ss_conf 17971799743798524445515895567741378730389984047741100257764320255216747899723776
Q gi|254780548|r 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324 (447)
Q Consensus 245 ~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G 324 (447)
.+|++ +.+++++|++++|+|||||++||++++++|++|||++|++++..+|||+++++|++|+|||||++|+|+|||+|
T Consensus 236 ~tg~~-~~l~~~~G~n~aP~~SPDG~~la~sls~~G~~dIY~~dl~~~~~~rLT~~~~idt~PswSPDG~~I~F~SdR~G 314 (430)
T PRK01742 236 NSGAR-KVVASFQGHNGAPAFSPDGSRLAFASSKDGVLNIYVMNANGGTPTQLTSGAGNNTEPSWSPDGNSILFTSDRSG 314 (430)
T ss_pred CCCCE-EEECCCCCCCCCCEECCCCCEEEEEECCCCCEEEEEEECCCCCEEECCCCCCCCCCEEECCCCCEEEEEECCCC
T ss_conf 78854-87225798634742999997999998169971489998899960783558998866148789999999938999
Q ss_pred CCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCCCCCEECCCCCEE
Q ss_conf 53315764025674111220353000046877688899997149915799998899967996627875543788789989
Q gi|254780548|r 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404 (447)
Q Consensus 325 ~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~~~~e~P~wSPDG~~i 404 (447)
.||||+|+++|++++|||. .+++ +|.|||||++|+|+++. +|+++++.++..++||+++.||+|+|||||++|
T Consensus 315 ~PQIY~m~~~g~~~~rit~--~~~~-~~~~SpdG~~i~~~~~~----~i~~~dl~tg~~~~lt~~~~dEsPswSPnG~~I 387 (430)
T PRK01742 315 SPQVYRMDASGGGATLVSG--GRGY-SGQISADGKTLVMINGD----NVVKQDLTTGVSEVLSSTFLDESPSISPNGIMI 387 (430)
T ss_pred CCCEEEEECCCCCEEEEEC--CCCC-CCEECCCCCEEEEEECC----CEEEEECCCCCEEECCCCCCCCCCCCCCCCCEE
T ss_conf 9647999689996267626--8874-31288999869999268----578887698977886468888897699998699
Q ss_pred EEEEEECCCCCEEEEEEECCCCCEEECC-CCCCCCCCCCCCCC
Q ss_conf 9999508987337999988997147336-78873675316557
Q gi|254780548|r 405 IFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQWVGFM 446 (447)
Q Consensus 405 ~f~~~~~g~~~~~l~~~~~~G~~~~~~~-~~g~~~~P~WsP~~ 446 (447)
+|++.++|.. .||+|++||+.+++++ ++|++++|+|||||
T Consensus 388 vf~s~~gg~~--~l~~vs~dG~~~~rl~~~~G~~~~PaWSP~L 428 (430)
T PRK01742 388 IYSSTQGLGK--VLQLVSADGRFKARLPGSDGQVKFPAWSPYL 428 (430)
T ss_pred EEEECCCCCC--EEEEEECCCCEEEECCCCCCCCCCCCCCCCC
T ss_conf 9998669982--6999994798248766899873687755774
No 9
>PRK04043 tolB translocation protein TolB; Provisional
Probab=100.00 E-value=0 Score=743.62 Aligned_cols=408 Identities=18% Similarity=0.265 Sum_probs=363.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCC--CCCCHHHHHHHHHHHHHHCCCCEEECCHHHCCCC
Q ss_conf 99999999999998720213316999971586642004630567--7530357899999986201751455086550346
Q gi|254780548|r 13 MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV--SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQK 90 (447)
Q Consensus 13 m~~~l~l~l~l~~~~~~~~a~A~~~i~It~~~~~pi~IAv~~f~--~~~~~~~~i~~ii~~DL~~SG~F~~i~~~~~~~~ 90 (447)
||++++++++++.+ ..|++.|+|+++...+.||||+||. ++..++++|++||++||.+||+|++++....
T Consensus 1 MKki~l~ll~~~~~-----~aae~~IeIt~~~~~~~~IAVvp~~~~~~~~l~~~i~~II~~DL~rSG~F~~i~~~~~--- 72 (419)
T PRK04043 1 MKKLVLFLLVSLGL-----FAVDATLDIVKKGQKLPKIVVEDSSDSNDANLKLKFFKILVNDLKVSSHFDVSENKTQ--- 72 (419)
T ss_pred CHHHHHHHHHHHHH-----HHCCEEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC---
T ss_conf 95577889999777-----4504799999478787658996168677641368999999875341658512787666---
Q ss_pred CCCCCCCCCHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCEECCCCCCCC-HHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 676111457788741562189999974046622578999841555420000232337-7788999999989999975044
Q gi|254780548|r 91 ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS-PASWRKIAHTISDDIYQSITGE 169 (447)
Q Consensus 91 ~~~~~~~~~f~~W~~~gad~lv~G~i~~~~~~~~~v~~~L~dv~~~~~i~~~~~~~~-~~~~R~~ah~~ad~i~~~ltG~ 169 (447)
....++|.+|+.+|+|+||+|++....+++++|+|+||||.++++++++.|... .+.||++||++||+||++|||+
T Consensus 73 ---~~~~~~~~~w~~~~~d~lv~g~v~~~~~g~~~v~~~L~Dv~~~~~l~~~~~~~~~~~~~r~iAH~iaD~Iye~ltG~ 149 (419)
T PRK04043 73 ---SNYAINYNELKDKKVNLVARYSLAVENGNKLSLRIKLYDANTGSLKFEKDYTINSLDRYPFLAHKSAIDINNYLKAP 149 (419)
T ss_pred ---CCCCCCHHHHHHHCCCEEEEEEEEECCCCEEEEEEEEEECCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf ---66776856877509979999999987898699999999864771965407970654555778999999999985588
Q ss_pred CCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEEC-CCCCEEEEEEECCCCCCCCCEEEECCCC
Q ss_conf 555544178875136764421001231145540268862176402345576-8998489985034676443037711797
Q gi|254780548|r 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS-PNQQKVAYATYDDEDILRVYLMDTRIDR 248 (447)
Q Consensus 170 ~G~f~triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wS-pDG~~Iay~s~~~~~~~~i~~~~~~~g~ 248 (447)
+|.|.+|++|+++..+ .++++|++||+||.|++.++++..+ ..|+|| |||++|||+||+++. ++||++|+.+|+
T Consensus 150 ~g~f~~r~i~~~~~~~--~~~~~L~i~D~Dg~n~~~i~~~~~~--i~P~wS~pd~~~i~Y~s~~~~~-p~iy~~dl~tg~ 224 (419)
T PRK04043 150 SIDWMKRFIVFSKYTS--PGKSEIVLADYTLTYQKVIVKGGLN--IFPKWANKEQTAFYYTSYNEDK-PTLLKYNLYTGT 224 (419)
T ss_pred CCCEEEEEEEEEECCC--CCEEEEEEECCCCCCCEEECCCCCC--CCCCEECCCCCEEEEEEECCCC-CEEEEEECCCCC
T ss_conf 7646989999996368--8704899978888875386169972--2576047999899999955998-589999987798
Q ss_pred CEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCE
Q ss_conf 17997437985244455158955677413787303899840477411002577643202552167478997237765331
Q gi|254780548|r 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328 (447)
Q Consensus 249 ~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qi 328 (447)
+ +.+++++|++++|+|||||++||++++++|++|||++|+++++.+|||++++||++|+|||||++|+|+|||+|.|||
T Consensus 225 r-~~l~~~~G~~~ap~~SPDG~~la~sls~~Gn~dIy~~~l~~~~~~rLT~~~~Idt~Ps~spDG~~ivF~SdR~G~PQI 303 (419)
T PRK04043 225 K-EKIASSEGMLVASDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTKTQLTNYPGIDVNGNFVEDDSRIVFVSDRLGYPNI 303 (419)
T ss_pred E-EEECCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCEECCCCCEEEEEECCCCCCEE
T ss_conf 8-982147984637869989879999974899951899988999658810278877552268999889999478999629
Q ss_pred EEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECC------CCCEEEEEEECCCCCEEEEECCCCCCCCEECCCCC
Q ss_conf 576402567411122035300004687768889999714------99157999988999679966278755437887899
Q gi|254780548|r 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402 (447)
Q Consensus 329 y~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~------~~~~~i~~~~~~g~~~~~lt~~~~~e~P~wSPDG~ 402 (447)
|+|+++|++++|||++|.+| ++|||||++|||++++ +|.|+|++|+++|+.+++||+++.||+|+|||||+
T Consensus 304 Y~~~~~g~~~~Ritf~G~yn---~~~Sp~G~~i~~~~r~~~~~~~~g~f~I~~~~~~~~~~~~LT~~~~dEsPs~sPnG~ 380 (419)
T PRK04043 304 FMKSLGSGSVEQVVFHGRNN---SAVSTYGDYIVYSSRESNNEFGKNVFNLYLISTNSDYIRRLTANGKNQFPRFSSDGG 380 (419)
T ss_pred EEEECCCCCEEEEEECCCCC---CCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCC
T ss_conf 99978999748887647757---763899998999983557655676289999979999779833789778986998995
Q ss_pred EEEEEEEECCCCCEEEEEEECCCCCEEECC-CCCCCCCCCC
Q ss_conf 899999508987337999988997147336-7887367531
Q gi|254780548|r 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQW 442 (447)
Q Consensus 403 ~i~f~~~~~g~~~~~l~~~~~~G~~~~~~~-~~g~~~~P~W 442 (447)
+|+|+++++|.. .|+.|.+||+...+++ ..|++++|+|
T Consensus 381 ~I~y~~~~gg~~--~L~~vs~dg~~~~~lp~~~G~vrePaW 419 (419)
T PRK04043 381 SIMFIKYLGAQS--ALGVIRLNYNKSFLFPLKVGKIQSIDW 419 (419)
T ss_pred EEEEEEEECCCE--EEEEEECCCCEEEEEECCCCCCCCCCC
T ss_conf 999999759965--999998468874884168877648899
No 10
>PRK01029 tolB translocation protein TolB; Provisional
Probab=100.00 E-value=0 Score=701.86 Aligned_cols=399 Identities=20% Similarity=0.301 Sum_probs=334.0
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCCCC--C---CHHHHHHHHHHHHHHCCCCEEECCHHHCCC
Q ss_conf 99999999999872021331699997158664200463056775--3---035789999998620175145508655034
Q gi|254780548|r 15 INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSI--D---ELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89 (447)
Q Consensus 15 ~~l~l~l~l~~~~~~~~a~A~~~i~It~~~~~pi~IAv~~f~~~--~---~~~~~i~~ii~~DL~~SG~F~~i~~~~~~~ 89 (447)
.++.-+++|++++.+....++++|+| ++...++||+|.+|..+ . .....+.+++.+||..++.|++.....
T Consensus 5 ~~~~~~l~~~~~~~~~~~~~~l~v~v-~~~~~~~Pi~va~~~~~~~~~~~~~~~~l~~v~~~dl~~~~~~~~~~~~~--- 80 (425)
T PRK01029 5 LCFLRFLICFLCLLPSLYAEDLEVHV-RSESSLLPIEVSLLTSPKDPKQQSYLASLRDIFAKDLALGDLLAPTKESA--- 80 (425)
T ss_pred HHHHHHHHHHHHHHHHHHHHEEEEEE-CCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC---
T ss_conf 68999999999985576362189997-37873616799813687773125689999999864210022004455568---
Q ss_pred CCCCCCCCCCHHHHHHCCCCEEEEEEEEECCCCEEEEEEEE-ECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 66761114577887415621899999740466225789998-41555420000232337778899999998999997504
Q gi|254780548|r 90 KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL-WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168 (447)
Q Consensus 90 ~~~~~~~~~~f~~W~~~gad~lv~G~i~~~~~~~~~v~~~L-~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG 168 (447)
|.. -+..|+..++. +.| .+..+++++++..|++..++||++||++||+|||+|||
T Consensus 81 -p~~-----i~~~~~~~~~~------------------~~l~~~~~~~~~~~~~~~~g~~~~~R~~aH~iaD~Iye~lTG 136 (425)
T PRK01029 81 -PLT-----IAIEAHYPELV------------------FSLKKSTKNPQKIFSLELSGDLSKDRQKIHEAADTIHYALTG 136 (425)
T ss_pred -CCC-----HHHCCCCCCEE------------------EEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf -653-----00013566579------------------995205627748876897169358899999999999998619
Q ss_pred CCCCCCCCEEEEEECCCCCCC--CEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEE--EEEECCCCCCCCCEEEE
Q ss_conf 455554417887513676442--10012311455402688621764023455768998489--98503467644303771
Q gi|254780548|r 169 EKGDFNSRILFVSESVVSGII--KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA--YATYDDEDILRVYLMDT 244 (447)
Q Consensus 169 ~~G~f~triafv~~~~~~~~~--~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Ia--y~s~~~~~~~~i~~~~~ 244 (447)
++|+|+||||||++++..+++ +++||+||+||+|+++||++++. +++|+|||||++|| |+||+++. ++||++++
T Consensus 137 ~~G~F~TRIaYV~~~~~~~~~~~~~~L~i~D~DG~N~~~lt~~~~~-ilSP~wSPdG~~ia~~YvSf~~g~-p~Iyi~dL 214 (425)
T PRK01029 137 VPGISSGKIVFSLSSTNSDQELKQGELWSVDYDGENLRPLTQEHSL-SVTPTWMHIGSNFPYLYVSYKYGV-PKIFLGSL 214 (425)
T ss_pred CCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCEEECCCCCC-EEECCCCCCCCCCEEEEEECCCCC-CEEEEEEC
T ss_conf 9865425399998277877761026699947889987770279971-474124689883159999657898-56999917
Q ss_pred CCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEE--CCCC----CCCCCCCCCCCCCCEEEECCCCEEEE
Q ss_conf 17971799743798524445515895567741378730389984--0477----41100257764320255216747899
Q gi|254780548|r 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD--LQSN----ATERLTNTLFINISASYSPDSSQIVF 318 (447)
Q Consensus 245 ~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d--~~~~----~~~~lT~~~~~d~~p~~spDG~~I~f 318 (447)
.+|++ +.+++++|++++|+|||||++||++++++|++|||+++ ++++ ..++||++.+||++|+|||||++|+|
T Consensus 215 ~tg~r-~~v~~f~G~n~aP~fSPDG~~lA~~ls~~Gn~dIY~~~~~l~t~~~g~~~r~lt~~~~IdtsPswSPDG~~I~F 293 (425)
T PRK01029 215 ENTEG-KKVLALQGNQFMPTFSPRKKLLAFISDAYGNPDLFLQSFSLATGAMGKPRRLLNEAFGTQGNPSFSPDGTKLVF 293 (425)
T ss_pred CCCCE-EEEECCCCCEECCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEE
T ss_conf 88726-89752699400740889998899999889984467875024334356522740357775678638799999999
Q ss_pred EECCCCCCCEEEEEECC--CCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCC-CCC
Q ss_conf 72377653315764025--674111220353000046877688899997149915799998899967996627875-543
Q gi|254780548|r 319 ESDREGKEQLYVMQSNG--SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAP 395 (447)
Q Consensus 319 ~Sdr~G~~qiy~~~~~g--~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~~~~-e~P 395 (447)
+|||+|+||||+|++++ ++++|+|+++.++ ..|.|||||++|||+++.+|.|+|+++|++++..++||++..+ |+|
T Consensus 294 tSDR~G~PQIY~m~~d~~~~~~rr~t~~~~~~-~~P~wSPdG~~Iaf~~~~~G~f~I~v~dl~~g~~~~LT~~~~d~EsP 372 (425)
T PRK01029 294 VSNKDGRPRIYIMQIDPEPQTPRLLTKKYRNS-SCPAWSPDGKKIAFCSVIKGVRQICIYDLSSGRDYQLTTSPINKESP 372 (425)
T ss_pred EECCCCCCEEEEEEECCCCCCEEEEECCCCCC-CCCEECCCCCEEEEEEEECCCEEEEEEECCCCCEEEEECCCCCCCCC
T ss_conf 96899994289997078888538984368863-57257789998999995289268999989999638971689977386
Q ss_pred EECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEECC-CCCCCCCCCCCCCCC
Q ss_conf 7887899899999508987337999988997147336-788736753165579
Q gi|254780548|r 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQWVGFMD 447 (447)
Q Consensus 396 ~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~~~~-~~g~~~~P~WsP~~~ 447 (447)
+|||||++|+|++.++|+ ..||.|+++|+..++++ .+|++++|+||||-+
T Consensus 373 SwsPNGr~Ivfas~~~G~--~~L~~vs~dG~~~~rL~~~~G~~rePaWspf~~ 423 (425)
T PRK01029 373 SWAIDSNHLVYSAGNSNE--SELYLLSLITKKTNKIVIGSGEKRFPSWGAFPS 423 (425)
T ss_pred CCCCCCCEEEEEECCCCC--EEEEEEECCCCEEEECCCCCCCCCCCCCCCCCC
T ss_conf 598898689999778997--799999888981787668998757887788887
No 11
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=100.00 E-value=0 Score=560.38 Aligned_cols=410 Identities=33% Similarity=0.557 Sum_probs=377.6
Q ss_pred CCCCCEEEEEEECCCCCCCEEEEECCCCCCC--CHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCCCCCCCHHHHHHC
Q ss_conf 0213316999971586642004630567753--03578999999862017514550865503466761114577887415
Q gi|254780548|r 29 PTSIHAFVKVATNSANYSPVSIAFTKFVSID--ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSL 106 (447)
Q Consensus 29 ~~~a~A~~~i~It~~~~~pi~IAv~~f~~~~--~~~~~i~~ii~~DL~~SG~F~~i~~~~~~~~~~~~~~~~~f~~W~~~ 106 (447)
...+ |++.|+|..+...|+||++.+|..++ ..++++.+++.+||+++|+|.+++...+++.+.... .+.+.+|+.+
T Consensus 12 ~~~~-a~~~i~~~~~~~~~~Pi~v~~~~~~~~~~~~~~~~~i~~~dl~~sg~f~~~~~~~~~~~~~~~~-~~~~~~w~~~ 89 (425)
T COG0823 12 QVTA-ALVLIVINSGVDSPLPIAVVSFSPDGGALPGEDISGIVAADLKASGKFIPLDRAGYIELPSGAS-EPLPPDWKAL 89 (425)
T ss_pred HHHH-EEEEEEEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHC
T ss_conf 3100-0169985026557775378432765655613666666777787536842014445434677656-4473676542
Q ss_pred CCCEEEEEEEEECCCCEEEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCC
Q ss_conf 62189999974046622578999841555420000232337778899999998999997504455554417887513676
Q gi|254780548|r 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186 (447)
Q Consensus 107 gad~lv~G~i~~~~~~~~~v~~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~f~triafv~~~~~~ 186 (447)
|+++++.|++..+.+|+++++++++|+..++++.++++......+|+.||.++|.+|++|||++|+|.+||+||++. .+
T Consensus 90 ~~~~~~~~~v~~~~~gs~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ah~~ad~~~e~lt~~~g~~~~~i~~v~~~-~~ 168 (425)
T COG0823 90 GADAVVLGQVTPSPDGSYRSSFQLFDTSTGFQLLGNSLVVTALLLRRAAHTIADAIYEKLTGIKGAFDTRIAYVAES-DG 168 (425)
T ss_pred CCCEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCEECHHHEECCCCCCCCCCCEEEEEEEC-CC
T ss_conf 74315754574068985899998431655300134430331245333342502011000037654013315665202-46
Q ss_pred CCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEEC
Q ss_conf 44210012311455402688621764023455768998489985034676443037711797179974379852444551
Q gi|254780548|r 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266 (447)
Q Consensus 187 ~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wS 266 (447)
+...++||++|+||.|.+.++.... ...+|+|||||++|+|+++..++.+++|++++.+++..+ +.++.+++..|+||
T Consensus 169 ~~~~~~l~~~D~dg~~~~~l~~~~~-~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~-i~~~~g~~~~P~fs 246 (425)
T COG0823 169 GPLPYELALGDYDGYNQQKLTDSGS-LILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPV-ILNFNGNNGAPAFS 246 (425)
T ss_pred CCCCCCEEEECCCCCCCEEECCCCC-CCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCE-EECCCCCCCCCCCC
T ss_conf 6654415564257755046414653-223754576677268999935888437999467787633-76447766785266
Q ss_pred CCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECC
Q ss_conf 58955677413787303899840477411002577643202552167478997237765331576402567411122035
Q gi|254780548|r 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346 (447)
Q Consensus 267 PDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~ 346 (447)
|||++|+|++.++|+.+||++|+.+++..+||+..+++++|+|||||++|+|+|||+|+||||+++.+|+.++|+|+.+.
T Consensus 247 pDG~~l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~~ 326 (425)
T COG0823 247 PDGSKLAFSSSRDGSPDIYLMDLDGKNLPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFSGG 326 (425)
T ss_pred CCCCEEEEEECCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCEEEECCCC
T ss_conf 99968999976899703799936887166400477635897698899889999789997337998889875057542679
Q ss_pred CCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCC-EEEEECCCCCCCCEECCCCCEEEEEEEECCCCCEEEEEEECCC
Q ss_conf 300004687768889999714991579999889996-7996627875543788789989999950898733799998899
Q gi|254780548|r 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425 (447)
Q Consensus 347 ~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~-~~~lt~~~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G 425 (447)
++ ..|.|||||++|+|.+..+|.++|..+++.++. ++.||....+|.|+|+|||++|+|.+...+ ...|+.++.+|
T Consensus 327 ~~-~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt~~~~~e~ps~~~ng~~i~~~s~~~~--~~~l~~~s~~g 403 (425)
T COG0823 327 GN-SNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILTSTYLNESPSWAPNGRMIMFSSGQGG--GSVLSLVSLDG 403 (425)
T ss_pred CC-CCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCC--CCEEEEEECCC
T ss_conf 86-6873889988899986246713466414678874676255544579886877537998457788--73688860456
Q ss_pred CCEEECCC-CCCCCCCCCCCCC
Q ss_conf 71473367-8873675316557
Q gi|254780548|r 426 RNETLINT-PAYASDPQWVGFM 446 (447)
Q Consensus 426 ~~~~~~~~-~g~~~~P~WsP~~ 446 (447)
+..+.+.. .+.++.|+|+|++
T Consensus 404 ~~~~~~~~~~~~~~~p~w~~~~ 425 (425)
T COG0823 404 RVSRPLPLADGDVRVPAWSPVL 425 (425)
T ss_pred CEEEEEECCCCCEEEECCCCCC
T ss_conf 2565420466416622356689
No 12
>TIGR02800 propeller_TolB Tol-Pal system beta propeller repeat protein TolB; InterPro: IPR014167 Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. Escherichia coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggests that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear..
Probab=100.00 E-value=0 Score=351.81 Aligned_cols=221 Identities=24% Similarity=0.458 Sum_probs=199.8
Q ss_pred CCEEEEEEEC---CCCCCCCCEEEECCCCCEEEEEC-CCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCC
Q ss_conf 9848998503---46764430377117971799743-7985244455158955677413787303899840477411002
Q gi|254780548|r 223 QQKVAYATYD---DEDILRVYLMDTRIDRAPKRIGN-FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298 (447)
Q Consensus 223 G~~Iay~s~~---~~~~~~i~~~~~~~g~~~~~~~~-~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT 298 (447)
..|||||+.. .+...+|++.|.. |.-++.|+. ......+|+|||||++|||++-+++.++||+.||.||+.+.++
T Consensus 166 ~tRIayV~~~~~~~~~~y~L~~aD~D-G~N~~~~~~Gs~~p~lsP~WSPDG~~lAYvsFe~~~p~iyv~~L~TG~r~~v~ 244 (439)
T TIGR02800 166 STRIAYVSKSGPKGGRRYELQVADYD-GANPQTLLRGSREPILSPAWSPDGQKLAYVSFESKKPEIYVQDLATGQREKVA 244 (439)
T ss_pred CCCEEEEEEECCCCCCCEEEEEECCC-CCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCEEEEE
T ss_conf 56479999756899874289996468-88614878147862013436789978999999389657999921107488987
Q ss_pred CCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEE-
Q ss_conf 5776432025521674789972377653315764025674111220353000046877688899997149915799998-
Q gi|254780548|r 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK- 377 (447)
Q Consensus 299 ~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~- 377 (447)
+.++++..|+|||||++|||+..+.|+||||+||+++++.+|||.+..-+ .+|.|||||++|+|++.++|..+||.|+
T Consensus 245 sf~G~n~AP~fSPDG~~LA~~lS~~Gn~~IY~~dl~~~~~~rlT~~~gID-TeP~wsPDG~~i~FtSDRgG~PQIY~~~l 323 (439)
T TIGR02800 245 SFPGINGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGGQLTRLTNGPGID-TEPSWSPDGKSIAFTSDRGGSPQIYRMNL 323 (439)
T ss_pred CCCCCEECCCCCCCCCEEEEEEECCCCCCEEEEECCCCEEEEEECCCCCC-CCCCCCCCCCEEEEEECCCCCCCEEEECC
T ss_conf 18981774217699979999980689964699958898024662279886-36418779988999987899812799615
Q ss_pred --CCCCCEEEEEC-CCCCCCCEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCC
Q ss_conf --89996799662-787554378878998999995089873379999889971473367887367531655
Q gi|254780548|r 378 --KDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445 (447)
Q Consensus 378 --~~g~~~~~lt~-~~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~~~~~~g~~~~P~WsP~ 445 (447)
.+|++.++||. |..+-+|+|||||+.|+|+..++|...-+|++||++|+..++|+..+..-.|+|||-
T Consensus 324 ~g~~gg~~~Rlt~~G~yN~~p~~SPdG~~ia~~~~~~G~~~F~Ia~~~~~~~~~~~LT~~~~DEsPSfaPN 394 (439)
T TIGR02800 324 NGADGGEARRLTFEGNYNASPSWSPDGKLIAFVHREGGGGVFNIAVMDLDGGDVQVLTDTGLDESPSFAPN 394 (439)
T ss_pred CCCCCCCEEEEEECCCEEECCEECCCCCEEEEEEECCCCCEEEEEEEECCCCEEEEEECCCCCCCCEECCC
T ss_conf 77567856999843855652577537779999970799861589998058881898356866898868538
No 13
>PRK02889 tolB translocation protein TolB; Provisional
Probab=100.00 E-value=0 Score=329.19 Aligned_cols=218 Identities=21% Similarity=0.350 Sum_probs=189.0
Q ss_pred CCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCC
Q ss_conf 98489985034676443037711797179974379852444551589556774137873038998404774110025776
Q gi|254780548|r 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302 (447)
Q Consensus 223 G~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~ 302 (447)
..+|||++.. ++..+|++.|.. |...+.++.......+|+|||||++|||++.++|.++||+.|+.+|+.++|++.++
T Consensus 163 ~trIayV~~~-~~~~~l~i~D~D-G~n~~~lt~~~~~~lsP~wSPdg~~iaYvS~~~g~p~iyi~dl~tg~~~~i~~~~g 240 (430)
T PRK02889 163 ATRLSYVIKT-GNRYQLQISDSD-GQNAQIALRSTEPIISPAWSPDGTKVAYVSFESKKPVVYVHDLATGRRYVVSNQKG 240 (430)
T ss_pred CCEEEEEECC-CCCEEEEEECCC-CCCCEEECCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCCC
T ss_conf 0269999857-981589997887-88846921689645851087999989999943998604999457882789722699
Q ss_pred CCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCC--
Q ss_conf 432025521674789972377653315764025674111220353000046877688899997149915799998899--
Q gi|254780548|r 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-- 380 (447)
Q Consensus 303 ~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g-- 380 (447)
++.+|+|||||++|+|+..+.|+++||+++++|+..+|||.+.. ...+|.|||||++|+|++.++|..+||+|+++|
T Consensus 241 ~n~aP~~SPDG~~la~sls~~Gn~dIy~~~l~~~~~~rLT~~~~-idt~PswSPDG~~I~FtSDR~G~PQIY~m~~~G~~ 319 (430)
T PRK02889 241 NNSAPAWSPDGRKLAVALSLDGNTQIYLVNADGSGLRRLTRSSG-IDTEPFFSPDGRWIYFTSDRGGAPQIYRMPASGES 319 (430)
T ss_pred CCCCCEECCCCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCC-CCCCEEECCCCCEEEEEECCCCCCCEEEEECCCCC
T ss_conf 66573199999889999877998148999999994788502899-88765688899989999589999618999689865
Q ss_pred -CCEEEEE-CCCCCCCCEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCC
Q ss_conf -9679966-2787554378878998999995089873379999889971473367887367531655
Q gi|254780548|r 381 -SQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445 (447)
Q Consensus 381 -~~~~~lt-~~~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~~~~~~g~~~~P~WsP~ 445 (447)
+..++|| .++.+..|+|||||+.|+|++..+|. .+|+++++++...++++..+..-.|+|||-
T Consensus 320 ~g~~~RiT~~g~yn~~P~wSPdG~~Iaf~~~~~g~--f~I~v~d~~~~~~~~LT~~~~dE~PswsPn 384 (430)
T PRK02889 320 AGAAQRVTFEGSYNVSPRISPDGKLLAYISRTGGG--FKLYVQDLATGQATALTDTTRDESPSFAAN 384 (430)
T ss_pred CCCEEEECCCCCCCCCCEECCCCCEEEEEEEECCE--EEEEEEECCCCCEEEEECCCCCCCCCCCCC
T ss_conf 46347740478886772076899989999925891--689999799998798106888879769999
No 14
>PRK03629 tolB translocation protein TolB; Provisional
Probab=100.00 E-value=0 Score=326.57 Aligned_cols=217 Identities=16% Similarity=0.275 Sum_probs=109.0
Q ss_pred CEEEEEEECCCC--CCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCC
Q ss_conf 848998503467--644303771179717997437985244455158955677413787303899840477411002577
Q gi|254780548|r 224 QKVAYATYDDED--ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301 (447)
Q Consensus 224 ~~Iay~s~~~~~--~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~ 301 (447)
.||||++-.+++ ..++++.|.. |...+.++.......+|+|||||++|||++.++|.++||++|+.+|+.++|++.+
T Consensus 165 TrIayV~~~~~~~~~~~L~i~D~D-G~N~~~l~~~~~~ilsP~wSPdg~~iaY~S~~~g~p~iyi~dL~tg~~~~~~~~~ 243 (430)
T PRK03629 165 TRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFP 243 (430)
T ss_pred CEEEEEEECCCCCCEEEEEEECCC-CCCCEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEECCCC
T ss_conf 159999951799742799997788-9986881058972054208389998999982279963999986678479931446
Q ss_pred CCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCC
Q ss_conf 64320255216747899723776533157640256741112203530000468776888999971499157999988999
Q gi|254780548|r 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381 (447)
Q Consensus 302 ~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~ 381 (447)
+++..|+|||||++|+|+..++|+++||++|+++++.+|||....- ..+|.|||||++|+|++.++|..+||+|+++|+
T Consensus 244 g~n~aP~~SPDG~~la~sls~~Gn~dIY~~dl~~~~~~rLT~~~~i-dt~PswSPDG~~I~F~SdR~G~PQIY~m~~~g~ 322 (430)
T PRK03629 244 RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSN-NTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGG 322 (430)
T ss_pred CCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCC-CCCCEECCCCCEEEEEECCCCCCEEEEEECCCC
T ss_conf 7666765998998999999568980599999999957898742687-888128478888999978999961999989999
Q ss_pred CEEEEEC-CCCCCCCEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCC
Q ss_conf 6799662-78755437887899899999508987337999988997147336788736753165
Q gi|254780548|r 382 QERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444 (447)
Q Consensus 382 ~~~~lt~-~~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~~~~~~g~~~~P~WsP 444 (447)
..++||. +..+..|+|||||+.|+|++..+|.. +|++++++|...++++..+..-.|+|||
T Consensus 323 ~~~RiTf~g~~n~~p~wSPdG~~Iaf~~~~~g~f--~I~~~d~~~~~~~~lt~~~~dEsPswsP 384 (430)
T PRK03629 323 APQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQ--HIAKQDLATGGVQVLSSTFLDETPSLAP 384 (430)
T ss_pred CEEEEECCCCCCCCCCCCCCCCEEEEEEECCCEE--EEEEEECCCCCEEECCCCCCCCCCCCCC
T ss_conf 8898632699756763667899899999329837--9999968999779802799888976999
No 15
>PRK00178 tolB translocation protein TolB; Provisional
Probab=100.00 E-value=0 Score=324.94 Aligned_cols=204 Identities=23% Similarity=0.351 Sum_probs=94.0
Q ss_pred CCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEE
Q ss_conf 30377117971799743798524445515895567741378730389984047741100257764320255216747899
Q gi|254780548|r 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318 (447)
Q Consensus 239 i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f 318 (447)
+++.|.. |...+.++.......+|+|||||++|||++.++|.++||+.|+.+|+.++|++.++++.+|+|||||++|+|
T Consensus 182 l~i~D~D-G~n~~~lt~~~~~~lsP~wSPdg~~iaY~s~~~~~p~i~i~dl~tg~~~~l~~~~g~~~~p~~SPdG~~ia~ 260 (433)
T PRK00178 182 LQRSDYD-GARAVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFEGLNGAPAWSPDGSKLAF 260 (433)
T ss_pred EEEECCC-CCCEEECCCCCCCEECCEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEE
T ss_conf 9984688-997279236897467000758998899999338986379998777827985416885667527899989999
Q ss_pred EECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEC-CCCCCCCEE
Q ss_conf 7237765331576402567411122035300004687768889999714991579999889996799662-787554378
Q gi|254780548|r 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTW 397 (447)
Q Consensus 319 ~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~-~~~~e~P~w 397 (447)
+..+.|+++||+++++++..+|||....- ..+|.|||||++|+|++.++|..+||+|+++|+..++||. +..+..|+|
T Consensus 261 ~ls~~g~~dIy~~~~~~~~~~rlT~~~~i-dt~Ps~spDG~~i~F~SdR~G~pQIY~~~~~g~~~~RlT~~g~yn~~P~w 339 (433)
T PRK00178 261 VLSKDGNPEIYVMDLASRQLRRLTNHWAI-DTEPFWGKDGRTIYFTSDRGGKPQIYKMDVNGGRAERVTFVGNYNANPKL 339 (433)
T ss_pred EEECCCCCCEEEEECCCCCEEEEECCCCC-CCCEEECCCCCEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCCCCCEE
T ss_conf 98069970058998799950476327875-56531646898899963789994599998999966772135887777108
Q ss_pred CCCCCEEEEEEEECCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCC
Q ss_conf 87899899999508987337999988997147336788736753165
Q gi|254780548|r 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444 (447)
Q Consensus 398 SPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~~~~~~g~~~~P~WsP 444 (447)
||||+.|+|++..+|....+|+++|+++...++++..+..-.|+|||
T Consensus 340 SPdG~~Iaf~~~~~g~~~f~I~~~d~~~g~~~~lt~~~~dE~Ps~sP 386 (433)
T PRK00178 340 SADEKTLVMVHRQDGFTNFHVAAQDLQRGSVRILTETSLDESPTVAP 386 (433)
T ss_pred CCCCCEEEEEEEECCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCC
T ss_conf 68999899999527854379999958999879866899887975999
No 16
>PRK05137 tolB translocation protein TolB; Provisional
Probab=100.00 E-value=0 Score=326.01 Aligned_cols=217 Identities=21% Similarity=0.419 Sum_probs=135.9
Q ss_pred CEEEEEEECCCC---CCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCC
Q ss_conf 848998503467---64430377117971799743798524445515895567741378730389984047741100257
Q gi|254780548|r 224 QKVAYATYDDED---ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300 (447)
Q Consensus 224 ~~Iay~s~~~~~---~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~ 300 (447)
.+||||+..+.+ ..+|++.|.. |...+.++.......+|+|||||++|||++.++|.++||+.|+.+|+.++|++.
T Consensus 169 TrIayVs~~g~~~~~~~~L~i~D~D-G~n~~~l~~~~~~ilsP~wSPdg~~iaY~S~~~~~p~i~i~dl~tg~~~~~~~~ 247 (437)
T PRK05137 169 TRIVYVAESGPKNARVKRLAIMDQD-GANVRYLTDGSSLVLTPRFSPTRQEITYMSYANGRPRVYLLDLETGQRELVGNF 247 (437)
T ss_pred CEEEEEEECCCCCCCEEEEEEECCC-CCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEECCCC
T ss_conf 6089998017888745799998889-998579304787542433858998799999449985799999878988850468
Q ss_pred CCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCC
Q ss_conf 76432025521674789972377653315764025674111220353000046877688899997149915799998899
Q gi|254780548|r 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380 (447)
Q Consensus 301 ~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g 380 (447)
++++.+|+|||||++|+|+..++|+++||+++++|+..+|||....- ..+|.|||||++|+|++.++|..+||+|+++|
T Consensus 248 ~G~n~ap~~SPdG~~la~~ls~~Gn~dIy~~~l~~~~~~rlT~~~~i-dt~PswSPDG~~i~F~SdR~G~PQIY~~~~~g 326 (437)
T PRK05137 248 PGMTFAPRFSPDGQKVVMSLAQGGNTDIYTMDLRSRTTTRLTDTPAI-DTSPSYSPDGSQIVFESDRSGSPQLYVMNADG 326 (437)
T ss_pred CCCEECCEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCC-CCCCCCCCCCCEEEEEECCCCCCEEEEEECCC
T ss_conf 99520530989998999999148995489998888835898606777-77852679999899996899994499998999
Q ss_pred CCEEEEEC-CCCCCCCEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCC
Q ss_conf 96799662-78755437887899899999508987337999988997147336788736753165
Q gi|254780548|r 381 SQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444 (447)
Q Consensus 381 ~~~~~lt~-~~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~~~~~~g~~~~P~WsP 444 (447)
+..++||. ++.+..|+|||||+.|+|++.++|. .+|++++++|...+.++..+..-.|+|||
T Consensus 327 ~~~~RiT~~~g~~~~p~wSPdG~~iaf~~~~~g~--~~I~~~~~~~~~~~~lT~~~~dEsPs~sP 389 (437)
T PRK05137 327 SNPRRISFGGGRYSTPVWSPRGDLIAFTKQGGGQ--FSIGVMKPDGSGERILTSGFLDEGPTWAP 389 (437)
T ss_pred CCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCE--EEEEEEECCCCCEEEECCCCCCCCCCCCC
T ss_conf 9768865279865773267899989999952984--88999967999769801789888976999
No 17
>PRK04792 tolB translocation protein TolB; Provisional
Probab=100.00 E-value=0 Score=324.69 Aligned_cols=216 Identities=21% Similarity=0.337 Sum_probs=96.4
Q ss_pred CCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEE
Q ss_conf 41788751367644210012311455402688621764023455768998489985034676443037711797179974
Q gi|254780548|r 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254 (447)
Q Consensus 175 triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~ 254 (447)
.|||||+...+. -+||+.|......+.++...+ ...+|+|||||++||++.-.+++ ++||++|+.+++ .++++
T Consensus 232 ~~iaYvs~~~g~----p~iyi~dl~tg~~~~i~~~~g-~n~aP~fSPdG~~la~~ls~~G~-~dIY~~dl~~~~-~~rlT 304 (450)
T PRK04792 232 KKLAYVSFQNGQ----AEIFIMNIYTGKREKITSYPR-HNGAPRFSPDGKKLALVLSKTGS-LQVYTLDLKTRK-LTQIT 304 (450)
T ss_pred CEEEEEEECCCC----CEEEEEECCCCCEEEEECCCC-CCCCCCCCCCCCEEEEEEECCCC-EEEEEEECCCCC-EEEEC
T ss_conf 989999953998----579999887897887401577-66578708999889999836997-348999889994-58712
Q ss_pred CCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEEC
Q ss_conf 37985244455158955677413787303899840477411002577643202552167478997237765331576402
Q gi|254780548|r 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334 (447)
Q Consensus 255 ~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~ 334 (447)
+..+.+.+|+|||||++|+|++.+.|.++||+|+++++..+|||...+.+.+|+|||||++|+|++-.+|..+|++++++
T Consensus 305 ~~~~idt~PswSPDG~~i~F~SdR~G~PQIY~~~~~g~~~~RlT~~g~~n~~p~~SPdG~~Iaf~~~~~g~f~I~v~~~~ 384 (450)
T PRK04792 305 RGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYRVNLSDGSTKRLTWQGSQNLGGQITPDGRFLVMVNRSDSGFNLAKQDLE 384 (450)
T ss_pred CCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECC
T ss_conf 57887877008789988999907899961899988999613432369987676187889989999815890589999479
Q ss_pred CCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEC-CCCCCCCEECC
Q ss_conf 567411122035300004687768889999714991579999889996799662-78755437887
Q gi|254780548|r 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSP 399 (447)
Q Consensus 335 g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~-~~~~e~P~wSP 399 (447)
++..+.||..+ .+ .+|.|||||++|+|++..++.-.|++++++|+..++|+. .+....|+|||
T Consensus 385 ~~~~~~lt~~~-~d-EsPswsPnGr~ivf~s~~~g~~~l~~vs~dG~~~~~l~~~~g~~~~PaWsP 448 (450)
T PRK04792 385 TGAVQVLTKTL-LD-ESPSIAPNGGMVIYSSIYNKKNVLSMVSIDGRFKARLPATNGRVRAPAWSP 448 (450)
T ss_pred CCCEEEECCCC-CC-CCCCCCCCCCEEEEEECCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCC
T ss_conf 99769802798-78-797799998689999867997089999934880377568998756888768
No 18
>PRK04922 tolB translocation protein TolB; Provisional
Probab=100.00 E-value=2.8e-45 Score=320.30 Aligned_cols=219 Identities=19% Similarity=0.308 Sum_probs=156.1
Q ss_pred CCEEEEEEECCCC---CCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCC
Q ss_conf 9848998503467---6443037711797179974379852444551589556774137873038998404774110025
Q gi|254780548|r 223 QQKVAYATYDDED---ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299 (447)
Q Consensus 223 G~~Iay~s~~~~~---~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~ 299 (447)
..+||||+....+ ..++++.|.. |...+.++.......+|+|||||++|||++.++|.++||++|+.+|+.++|++
T Consensus 167 ~TrIayV~~~g~~~~~~~~L~i~D~D-G~N~~~lt~~~~~ilsP~wSPdg~~iaYvS~~~g~p~iyi~dl~tg~~~~l~~ 245 (439)
T PRK04922 167 WTRIAYVTASGSGGAMRYALMVADSD-GYNPQTIVRSAEPLLSPNWSPDGKKLAYVSFERGNSSIYLQDIATGARELVSS 245 (439)
T ss_pred EEEEEEEEECCCCCCCEEEEEEECCC-CCCEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCEEEEECCCCCEEECCC
T ss_conf 23699998017888725999985778-99718922689826842476899889999802798747999867885785045
Q ss_pred CCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECC
Q ss_conf 77643202552167478997237765331576402567411122035300004687768889999714991579999889
Q gi|254780548|r 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379 (447)
Q Consensus 300 ~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~ 379 (447)
.++++.+|+|||||++|+|+..+.|+++||+++++++..+|||....- ..+|.|||||++|+|++.++|..+||+|+++
T Consensus 246 ~~g~n~aP~~SPDG~~ia~sls~~Gn~dIy~~~l~~~~~~rlT~~~~i-dt~Ps~sPDG~~i~F~SdR~G~pQIY~~~~~ 324 (439)
T PRK04922 246 FRGINGAPSFSPDGRRLALALSRSGNPEIYVMDLGSKQLTQLTNHFGI-DTEPTWAPDGGSIYFTSDRGGRPQIYQVAAS 324 (439)
T ss_pred CCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCC-CCCEEECCCCCEEEEEECCCCCCEEEEEECC
T ss_conf 788754776989991999999169971028996899852564117886-6771487798889997068999549999899
Q ss_pred CCCEEEEE-CCCCCCCCEECCCCCEEEEEEEECCCCCEEEEEEECCC-C-CEEECCCCCCCCCCCCCCC
Q ss_conf 99679966-27875543788789989999950898733799998899-7-1473367887367531655
Q gi|254780548|r 380 GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-R-NETLINTPAYASDPQWVGF 445 (447)
Q Consensus 380 g~~~~~lt-~~~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G-~-~~~~~~~~g~~~~P~WsP~ 445 (447)
|+..++|| ++..+..|+|||||+.|+|+...+|. .+|++++.++ . ..+.++.....-.|+|||-
T Consensus 325 g~~~~RlT~~g~yn~~p~wSPdG~~Iaf~~~~~g~--f~I~v~d~~~g~~~~~~lt~g~~dEsPswsPn 391 (439)
T PRK04922 325 GGSANRVTFQGNYNATASVSFDGKKIAVAQGSGNT--YRIAMMDRSLGSPSWSTLSPGSLDESPSFAPN 391 (439)
T ss_pred CCCEEEEECCCCCCCCEEECCCCCEEEEEEEECCE--EEEEEEECCCCCCCEEEECCCCCCCCCCCCCC
T ss_conf 99647875579988880299899989999831884--89999946789744898037887779859999
No 19
>PRK01742 tolB translocation protein TolB; Provisional
Probab=100.00 E-value=2.4e-43 Score=307.18 Aligned_cols=214 Identities=20% Similarity=0.324 Sum_probs=179.0
Q ss_pred CCEEEEEEECCC--CCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCC
Q ss_conf 984899850346--764430377117971799743798524445515895567741378730389984047741100257
Q gi|254780548|r 223 QQKVAYATYDDE--DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300 (447)
Q Consensus 223 G~~Iay~s~~~~--~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~ 300 (447)
..||||++..++ ...++++.|.. |...+.++.......+|+|||||++|||++.+++.++||++|+.+|+.+.|++.
T Consensus 168 ~trIayV~~~~~~~~~~~l~i~D~D-G~N~~~l~~~~~~ilsP~wSPdg~~iaY~S~~~~~~~iyi~dl~tg~~~~l~~~ 246 (430)
T PRK01742 168 RTRIAYVVQKNGGSQPYEVRVADYD-GYNQFIVNRSAQPIMSPAWSPDGQRLAYVSFENKKSQLVVQDLNSGARKVVASF 246 (430)
T ss_pred EEEEEEEEECCCCCCEEEEEECCCC-CCCEEECCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEECCC
T ss_conf 0049999821799843799962678-998088535797257201858998899999049997899998578854872257
Q ss_pred CCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCC
Q ss_conf 76432025521674789972377653315764025674111220353000046877688899997149915799998899
Q gi|254780548|r 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380 (447)
Q Consensus 301 ~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g 380 (447)
++++.+|+|||||++|+|++.+.|+++||++++++++.+|||..... ..+|.|||||++|+|++.++|..+||+|+++|
T Consensus 247 ~G~n~aP~~SPDG~~la~sls~~G~~dIY~~dl~~~~~~rLT~~~~i-dt~PswSPDG~~I~F~SdR~G~PQIY~m~~~g 325 (430)
T PRK01742 247 QGHNGAPAFSPDGSRLAFASSKDGVLNIYVMNANGGTPTQLTSGAGN-NTEPSWSPDGNSILFTSDRSGSPQVYRMDASG 325 (430)
T ss_pred CCCCCCCEECCCCCEEEEEECCCCCEEEEEEECCCCCEEECCCCCCC-CCCEEECCCCCEEEEEECCCCCCCEEEEECCC
T ss_conf 98634742999997999998169971489998899960783558998-86614878999999993899996479996899
Q ss_pred CCEEEEECCCCCCCCEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 96799662787554378878998999995089873379999889971473367887367531655
Q gi|254780548|r 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445 (447)
Q Consensus 381 ~~~~~lt~~~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~~~~~~g~~~~P~WsP~ 445 (447)
+..+++| ++.+..|+|||||+.|+|.+.. .+..+++.....++++..+..-.|+|||-
T Consensus 326 ~~~~rit-~~~~~~~~~SpdG~~i~~~~~~------~i~~~dl~tg~~~~lt~~~~dEsPswSPn 383 (430)
T PRK01742 326 GGATLVS-GGRGYSGQISADGKTLVMINGD------NVVKQDLTTGVSEVLSSTFLDESPSISPN 383 (430)
T ss_pred CCEEEEE-CCCCCCCEECCCCCEEEEEECC------CEEEEECCCCCEEECCCCCCCCCCCCCCC
T ss_conf 9626762-6887431288999869999268------57888769897788646888889769999
No 20
>PRK01029 tolB translocation protein TolB; Provisional
Probab=100.00 E-value=6e-43 Score=304.45 Aligned_cols=219 Identities=15% Similarity=0.262 Sum_probs=180.2
Q ss_pred CCCEE--EEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEE--ECC---
Q ss_conf 44178--87513676442100123114554026886217640234557689984899850346764430377--117---
Q gi|254780548|r 174 NSRIL--FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD--TRI--- 246 (447)
Q Consensus 174 ~tria--fv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~--~~~--- 246 (447)
.++|| ||+...+. -+||+.|......+.|.... .+..+|+|||||++||++.-.+++ ++||+++ +.+
T Consensus 192 G~~ia~~YvSf~~g~----p~Iyi~dL~tg~r~~v~~f~-G~n~aP~fSPDG~~lA~~ls~~Gn-~dIY~~~~~l~t~~~ 265 (425)
T PRK01029 192 GSNFPYLYVSYKYGV----PKIFLGSLENTEGKKVLALQ-GNQFMPTFSPRKKLLAFISDAYGN-PDLFLQSFSLATGAM 265 (425)
T ss_pred CCCCEEEEEECCCCC----CEEEEEECCCCCEEEEECCC-CCEECCCCCCCCCEEEEEECCCCC-CCEEEEEECCCCCCC
T ss_conf 883159999657898----56999917887268975269-940074088999889999988998-446787502433435
Q ss_pred CCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCC--CCCCCCCCCCCCCCCEEEECCCCEEEEEECCCC
Q ss_conf 971799743798524445515895567741378730389984047--741100257764320255216747899723776
Q gi|254780548|r 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS--NATERLTNTLFINISASYSPDSSQIVFESDREG 324 (447)
Q Consensus 247 g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~--~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G 324 (447)
|+..++++...+++.+|+|||||++|+|++.++|.++||+|++++ +..+++|.......+|+|||||++|+|++-++|
T Consensus 266 g~~~r~lt~~~~IdtsPswSPDG~~I~FtSDR~G~PQIY~m~~d~~~~~~rr~t~~~~~~~~P~wSPdG~~Iaf~~~~~G 345 (425)
T PRK01029 266 GKPRRLLNEAFGTQGNPSFSPDGTKLVFVSNKDGRPRIYIMQIDPEPQTPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKG 345 (425)
T ss_pred CCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCEECCCCCEEEEEEEECC
T ss_conf 65227403577756786387999999999689999428999707888853898436886357257789998999995289
Q ss_pred CCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECC-CCCCCCEECC
Q ss_conf 53315764025674111220353000046877688899997149915799998899967996627-8755437887
Q gi|254780548|r 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSP 399 (447)
Q Consensus 325 ~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~-~~~e~P~wSP 399 (447)
..+|+++|++++..++||... .+..+|.|||||++|+|+...+|...||+++++|+..++|+.. +....|+|||
T Consensus 346 ~f~I~v~dl~~g~~~~LT~~~-~d~EsPSwsPNGr~Ivfas~~~G~~~L~~vs~dG~~~~rL~~~~G~~rePaWsp 420 (425)
T PRK01029 346 VRQICIYDLSSGRDYQLTTSP-INKESPSWAIDSNHLVYSAGNSNESELYLLSLITKKTNKIVIGSGEKRFPSWGA 420 (425)
T ss_pred CEEEEEEECCCCCEEEEECCC-CCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCCC
T ss_conf 268999989999638971689-977386598898689999778997799999888981787668998757887788
No 21
>PRK04043 tolB translocation protein TolB; Provisional
Probab=100.00 E-value=8e-39 Score=276.88 Aligned_cols=218 Identities=12% Similarity=0.167 Sum_probs=177.4
Q ss_pred CEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEEC-CCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCC
Q ss_conf 8489985034676443037711797179974379852444551-589556774137873038998404774110025776
Q gi|254780548|r 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302 (447)
Q Consensus 224 ~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wS-PDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~ 302 (447)
+.++|+.+.+.+..+|++.|.. |...+.+.. .+.+..|+|| |||++|+|++...+.+.||+.|+.+|+.+.|++.++
T Consensus 156 r~i~~~~~~~~~~~~L~i~D~D-g~n~~~i~~-~~~~i~P~wS~pd~~~i~Y~s~~~~~p~iy~~dl~tg~r~~l~~~~G 233 (419)
T PRK04043 156 RFIVFSKYTSPGKSEIVLADYT-LTYQKVIVK-GGLNIFPKWANKEQTAFYYTSYNEDKPTLLKYNLYTGTKEKIASSEG 233 (419)
T ss_pred EEEEEEECCCCCEEEEEEECCC-CCCCEEECC-CCCCCCCCEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEECCCCC
T ss_conf 9999996368870489997888-887538616-99722576047999899999955998589999987798898214798
Q ss_pred CCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCC
Q ss_conf 43202552167478997237765331576402567411122035300004687768889999714991579999889996
Q gi|254780548|r 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382 (447)
Q Consensus 303 ~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~ 382 (447)
+..+|+|||||++|+++..++|+++||++|+++++.+|||.... -..+|.|||||++|+|++.++|..+||+|+++|+.
T Consensus 234 ~~~ap~~SPDG~~la~sls~~Gn~dIy~~~l~~~~~~rLT~~~~-Idt~Ps~spDG~~ivF~SdR~G~PQIY~~~~~g~~ 312 (419)
T PRK04043 234 MLVASDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTKTQLTNYPG-IDVNGNFVEDDSRIVFVSDRLGYPNIFMKSLGSGS 312 (419)
T ss_pred CCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCC-CCCCCEECCCCCEEEEEECCCCCCEEEEEECCCCC
T ss_conf 46378699898799999748999518999889996588102788-77552268999889999478999629999789997
Q ss_pred EEEEECCCCCCCCEECCCCCEEEEEEEECC----CCCEEEEEEECCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 799662787554378878998999995089----873379999889971473367887367531655
Q gi|254780548|r 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDG----DTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445 (447)
Q Consensus 383 ~~~lt~~~~~e~P~wSPDG~~i~f~~~~~g----~~~~~l~~~~~~G~~~~~~~~~g~~~~P~WsP~ 445 (447)
.+++|-.+.. .++|||||++|+|++..+. ...-+|++++++|...++++..+..-.|+|||-
T Consensus 313 ~~Ritf~G~y-n~~~Sp~G~~i~~~~r~~~~~~~~g~f~I~~~~~~~~~~~~LT~~~~dEsPs~sPn 378 (419)
T PRK04043 313 VEQVVFHGRN-NSAVSTYGDYIVYSSRESNNEFGKNVFNLYLISTNSDYIRRLTANGKNQFPRFSSD 378 (419)
T ss_pred EEEEEECCCC-CCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCCCCCC
T ss_conf 4888764775-77638999989999835576556762899999799997798337897789869989
No 22
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=100.00 E-value=5.1e-32 Score=231.35 Aligned_cols=223 Identities=25% Similarity=0.415 Sum_probs=177.5
Q ss_pred EECCCCCEEEEEEEC--CCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCC-EEEEEEECCCCCC
Q ss_conf 576899848998503--4676443037711797179974379852444551589556774137873-0389984047741
Q gi|254780548|r 218 RFSPNQQKVAYATYD--DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA-MDIYSVDLQSNAT 294 (447)
Q Consensus 218 ~wSpDG~~Iay~s~~--~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~-~~I~~~d~~~~~~ 294 (447)
.+--+ .+|+|++.. .....++++.|-. |...+.++........|.|||||++++|..-..+. ++||+++++++..
T Consensus 153 ~g~~~-~~i~~v~~~~~~~~~~~l~~~D~d-g~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~ 230 (425)
T COG0823 153 KGAFD-TRIAYVAESDGGPLPYELALGDYD-GYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKR 230 (425)
T ss_pred CCCCC-CEEEEEEECCCCCCCCCEEEECCC-CCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCC
T ss_conf 54013-315665202466654415564257-7550464146532237545766772689999358884379994677876
Q ss_pred CCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEE
Q ss_conf 10025776432025521674789972377653315764025674111220353000046877688899997149915799
Q gi|254780548|r 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374 (447)
Q Consensus 295 ~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~ 374 (447)
.++.+..+.+..|.|||||++|+|+++|.|+++||++|+++++.++||.. .+....|.|||||++|+|++..+|..+||
T Consensus 231 ~~i~~~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~-~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~ 309 (425)
T COG0823 231 PVILNFNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPRLTNG-FGINTSPSWSPDGSKIVFTSDRGGRPQIY 309 (425)
T ss_pred CEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEEECC-CCCCCCCCCCCCCCEEEEEECCCCCCEEE
T ss_conf 33764477667852669996899997689970379993688716640047-76358976988998899997899973379
Q ss_pred EEECCCCCEEEEECC-CCCCCCEECCCCCEEEEEEEECCCCCEEEEEEEC-CCCCEEECCCCCCCCCCCCCCC
Q ss_conf 998899967996627-8755437887899899999508987337999988-9971473367887367531655
Q gi|254780548|r 375 VMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVGF 445 (447)
Q Consensus 375 ~~~~~g~~~~~lt~~-~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~-~G~~~~~~~~~g~~~~P~WsP~ 445 (447)
+++++|+..+++|.. +.+..|.|||||++|+|.+..+|. ..+...++ +|...+.++.......|.|+|-
T Consensus 310 ~~~~~g~~~~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~--~~i~~~~~~~~~~~~~lt~~~~~e~ps~~~n 380 (425)
T COG0823 310 LYDLEGSQVTRLTFSGGGNSNPVWSPDGDKIVFESSSGGQ--WDIDKNDLASGGKIRILTSTYLNESPSWAPN 380 (425)
T ss_pred EECCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCC--EEEEECCCCCCCCEEECCCCCCCCCCCCCCC
T ss_conf 9888987505754267986687388998889998624671--3466414678874676255544579886877
No 23
>pfam00930 DPPIV_N Dipeptidyl peptidase IV (DPP IV) N-terminal region. This family is an alignment of the region to the N-terminal side of the active site. The Prosite motif does not correspond to this Pfam entry.
Probab=99.97 E-value=8.3e-27 Score=196.46 Aligned_cols=247 Identities=17% Similarity=0.227 Sum_probs=140.5
Q ss_pred EEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCC------------
Q ss_conf 00123114554026886217640234557689984899850346764430377117971799743798------------
Q gi|254780548|r 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS------------ 258 (447)
Q Consensus 191 ~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~------------ 258 (447)
-.+||.|.-....++|+.... ....|+|||||++|||+. + ..||++++.+|.. .+||....
T Consensus 23 ~~~~i~d~~t~~~~~l~~~~~-~~~~p~wSPdG~~iafv~--~---~nly~~~~~~g~~-~~lT~dg~~~~~~G~~dwvy 95 (349)
T pfam00930 23 ASYYIYDLETGTVEPLPPGEG-KIQYAKWSPDGHKLAYVR--D---NNLYVRELATGKE-TQITSDGSNGIFNGLADWVY 95 (349)
T ss_pred EEEEEEECCCCCEEECCCCCC-CEEEEEECCCCCEEEEEE--C---CCEEEEECCCCCE-EEEECCCCCCCCCCCCCHHH
T ss_conf 889999898998898868988-558639999999999996--8---8389998899967-98723897331257641000
Q ss_pred ------CEEEEEECCCCCEEEEEECCC----------------------------CC----EEEEEEECCCCCCCCCCCC
Q ss_conf ------524445515895567741378----------------------------73----0389984047741100257
Q gi|254780548|r 259 ------MILAPRFSSNGKRALISVQKD----------------------------EA----MDIYSVDLQSNATERLTNT 300 (447)
Q Consensus 259 ------~~~~p~wSPDG~~la~~~s~~----------------------------g~----~~I~~~d~~~~~~~~lT~~ 300 (447)
...+..|||||++|||....+ |. ..++++|+++++..+++..
T Consensus 96 eeE~~~~~~~~~WSPDg~~la~~~~d~~~v~~~~~~~~~~~~~~p~~~~~~YPk~G~~np~v~l~v~d~~~~~~~~~~~~ 175 (349)
T pfam00930 96 EEEVFGSNSAYWWSPDGSRLAFLRFDESEVPIITLPDYTDDGYYPEVRSIKYPKAGAPNPTVKLFVYDLASGKTVEIVPP 175 (349)
T ss_pred HHHCCCCCCCEEECCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEEEECC
T ss_conf 01105775517999999989999988868818998770587788612688677799879737999999999978998687
Q ss_pred CCC------CCCEEEECCCCEEEEEECCCCC-CCEEEEEECCCCCCEEEEECCC----CEEEEEECCCCCEEEEEECCCC
Q ss_conf 764------3202552167478997237765-3315764025674111220353----0000468776888999971499
Q gi|254780548|r 301 LFI------NISASYSPDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEA----SYFDPVWSPQGDLIAFTKFSGE 369 (447)
Q Consensus 301 ~~~------d~~p~~spDG~~I~f~Sdr~G~-~qiy~~~~~g~~~~rlT~~~~~----~~~~p~wSPdG~~Iaf~~~~~~ 369 (447)
... -....|+|||+.+++..+|..+ ..|++++++++..+.+..+... ....|.|+|||+.++|.+..+|
T Consensus 176 ~~~~~~d~y~~~~~W~~d~~~~~~~~~R~q~~~~l~~~d~~tg~~~~~~~e~~~~wv~~~~~~~~~~dg~~~i~~ser~G 255 (349)
T pfam00930 176 DDLSDADYYITRVKWTPDEKLLVQWLNRDQNVLDLVLVDTETGRTVVLLEETSDGWVELHQDPVFLRDGSGFLWISERDG 255 (349)
T ss_pred CCCCCCCEEEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEECCCCCEECCCCCCEEECCCCEEEEEEECCC
T ss_conf 45677862676669878994999998388987999999899992899985128842714787238638997999994289
Q ss_pred CEEEEEEECCCCCEEEEECCCCC-C-CCEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEECC-CCCCCCCCCCCC
Q ss_conf 15799998899967996627875-5-437887899899999508987337999988997147336-788736753165
Q gi|254780548|r 370 KFAIGVMKKDGSQERLLVEDSNL-Q-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQWVG 444 (447)
Q Consensus 370 ~~~i~~~~~~g~~~~~lt~~~~~-e-~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~~~~-~~g~~~~P~WsP 444 (447)
..|||+++.+|+..++||+|..+ . -..|+++++.|+|++..++....+||.++++|.+.++|+ .+|....+.|||
T Consensus 256 ~~hly~~~~~g~~~~~LT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~~hlY~v~~~~~~~~~LT~~~g~~~~~~~Sp 333 (349)
T pfam00930 256 YKHLYLYDLDGKLPRQLTSGNWEVTSILGVDEKRDLVYFTATEDSPGERHLYRVSLDGGEPQCLTDESGDHDSASFSP 333 (349)
T ss_pred CCEEEEEECCCCCCEEEECCCEEEEEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCEEECCCCCCCEEEEEECC
T ss_conf 658999938988413760488168705899088999999980899880799999999998088768999706389999
No 24
>pfam00930 DPPIV_N Dipeptidyl peptidase IV (DPP IV) N-terminal region. This family is an alignment of the region to the N-terminal side of the active site. The Prosite motif does not correspond to this Pfam entry.
Probab=99.96 E-value=6.3e-26 Score=190.56 Aligned_cols=259 Identities=15% Similarity=0.286 Sum_probs=183.8
Q ss_pred EEEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCE
Q ss_conf 25789998415554200002323377788999999989999975044555544178875136764421001231145540
Q gi|254780548|r 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202 (447)
Q Consensus 123 ~~~v~~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~f~triafv~~~~~~~~~~~~l~i~d~DG~n 202 (447)
.....+.+||+.+++..- +.......+ + -.=.+-..+||||.+. .||+++.++..
T Consensus 20 s~~~~~~i~d~~t~~~~~---l~~~~~~~~----------~----p~wSPdG~~iafv~~~--------nly~~~~~~g~ 74 (349)
T pfam00930 20 SYTASYYIYDLETGTVEP---LPPGEGKIQ----------Y----AKWSPDGHKLAYVRDN--------NLYVRELATGK 74 (349)
T ss_pred CCEEEEEEEECCCCCEEE---CCCCCCCEE----------E----EEECCCCCEEEEEECC--------CEEEEECCCCC
T ss_conf 425889999898998898---868988558----------6----3999999999999688--------38999889996
Q ss_pred EEEEEECCCCCE-----------------EEEEECCCCCEEEEEEECCCC------------------------------
Q ss_conf 268862176402-----------------345576899848998503467------------------------------
Q gi|254780548|r 203 IRYLTPSRDQIL-----------------FEPRFSPNQQKVAYATYDDED------------------------------ 235 (447)
Q Consensus 203 ~~~l~~~~~~~~-----------------~sP~wSpDG~~Iay~s~~~~~------------------------------ 235 (447)
.++||......+ ....|||||++|||..+....
T Consensus 75 ~~~lT~dg~~~~~~G~~dwvyeeE~~~~~~~~~WSPDg~~la~~~~d~~~v~~~~~~~~~~~~~~p~~~~~~YPk~G~~n 154 (349)
T pfam00930 75 ETQITSDGSNGIFNGLADWVYEEEVFGSNSAYWWSPDGSRLAFLRFDESEVPIITLPDYTDDGYYPEVRSIKYPKAGAPN 154 (349)
T ss_pred EEEEECCCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCC
T ss_conf 79872389733125764100001105775517999999989999988868818998770587788612688677799879
Q ss_pred -CCCCCEEEECCCCCEEEEECC------CCCEEEEEECCCCCEEEEEECCCCC-EEEEEEECCCCCCCCCCCCC---C--
Q ss_conf -644303771179717997437------9852444551589556774137873-03899840477411002577---6--
Q gi|254780548|r 236 -ILRVYLMDTRIDRAPKRIGNF------RSMILAPRFSSNGKRALISVQKDEA-MDIYSVDLQSNATERLTNTL---F-- 302 (447)
Q Consensus 236 -~~~i~~~~~~~g~~~~~~~~~------~~~~~~p~wSPDG~~la~~~s~~g~-~~I~~~d~~~~~~~~lT~~~---~-- 302 (447)
..+++++++.+++..+ +... +.......|+|||+.+++..+++.+ .+|+++|++++..+.+.... .
T Consensus 155 p~v~l~v~d~~~~~~~~-~~~~~~~~~~d~y~~~~~W~~d~~~~~~~~~R~q~~~~l~~~d~~tg~~~~~~~e~~~~wv~ 233 (349)
T pfam00930 155 PTVKLFVYDLASGKTVE-IVPPDDLSDADYYITRVKWTPDEKLLVQWLNRDQNVLDLVLVDTETGRTVVLLEETSDGWVE 233 (349)
T ss_pred CEEEEEEEECCCCCEEE-EECCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEECCCCCEEC
T ss_conf 73799999999997899-86874567786267666987899499999838898799999989999289998512884271
Q ss_pred CCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEE-EECCCCCEEEEEECCCC--CEEEEEEECC
Q ss_conf 43202552167478997237765331576402567411122035300004-68776888999971499--1579999889
Q gi|254780548|r 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGE--KFAIGVMKKD 379 (447)
Q Consensus 303 ~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p-~wSPdG~~Iaf~~~~~~--~~~i~~~~~~ 379 (447)
....|.|+|||+.++|.|+|+|..|||+++.+|+..++||. |.+..... .|+++++.|.|+...++ ..+||.++++
T Consensus 234 ~~~~~~~~~dg~~~i~~ser~G~~hly~~~~~g~~~~~LT~-G~~~V~~i~~~d~~~~~iyf~a~~~~p~~~hlY~v~~~ 312 (349)
T pfam00930 234 LHQDPVFLRDGSGFLWISERDGYKHLYLYDLDGKLPRQLTS-GNWEVTSILGVDEKRDLVYFTATEDSPGERHLYRVSLD 312 (349)
T ss_pred CCCCCEEECCCCEEEEEEECCCCCEEEEEECCCCCCEEEEC-CCEEEEEEEEEECCCCEEEEEEECCCCCEEEEEEEECC
T ss_conf 47872386389979999942896589999389884137604-88168705899088999999980899880799999999
Q ss_pred CCCEEEEECCCCC-CCCEECCCCCEEEEEE
Q ss_conf 9967996627875-5437887899899999
Q gi|254780548|r 380 GSQERLLVEDSNL-QAPTWSPSGRSLIFSR 408 (447)
Q Consensus 380 g~~~~~lt~~~~~-e~P~wSPDG~~i~f~~ 408 (447)
|+..++||....+ ++++|||||++++-.-
T Consensus 313 ~~~~~~LT~~~g~~~~~~~Spdg~~~v~~~ 342 (349)
T pfam00930 313 GGEPQCLTDESGDHDSASFSPNGKYYVLTY 342 (349)
T ss_pred CCCEEECCCCCCCEEEEEECCCCCEEEEEC
T ss_conf 998088768999706389999999999984
No 25
>pfam04052 TolB_N TolB amino-terminal domain. TolB is an essential periplasmic component of the tol-dependent translocation system. This function of this amino terminal domain is uncertain.
Probab=99.85 E-value=6.9e-21 Score=156.84 Aligned_cols=103 Identities=36% Similarity=0.577 Sum_probs=92.5
Q ss_pred EEEEEECCCCCCCEEEEECCCCCCC---CHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCCCCCCCHHHHHHCCCCEE
Q ss_conf 6999971586642004630567753---0357899999986201751455086550346676111457788741562189
Q gi|254780548|r 35 FVKVATNSANYSPVSIAFTKFVSID---ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVL 111 (447)
Q Consensus 35 ~~~i~It~~~~~pi~IAv~~f~~~~---~~~~~i~~ii~~DL~~SG~F~~i~~~~~~~~~~~~~~~~~f~~W~~~gad~l 111 (447)
+++|+|++|..+|+||||+||.+.+ ..++++++||++||.+||+|+++++..+++.|.... .++|.+|+.+|+|+|
T Consensus 1 ~l~IeIt~g~~~~ipIAV~pf~~~~~~~~~~~~i~~ii~~DL~~SG~F~~i~~~~~~~~p~~~~-~~~~~~W~~lga~~l 79 (106)
T pfam04052 1 QLEIEITGGVDRPLPIAVVPFAGEGGAAELPEDISEVIAADLARSGLFRPIDPSAFPSSPTSNS-EVDFADWRALGADAL 79 (106)
T ss_pred CEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHCCCCCCCCC-CCCHHHHHHCCCCEE
T ss_conf 9599991477761167994865677753057999999999998688748548555434898546-856568421367789
Q ss_pred EEEEEEECCCCEEEEEEEEECCCCCCEE
Q ss_conf 9999740466225789998415554200
Q gi|254780548|r 112 VTGRVIKEGKDRLRVEFRLWDVKDRKQI 139 (447)
Q Consensus 112 v~G~i~~~~~~~~~v~~~L~dv~~~~~i 139 (447)
|+|+++..++ +++++|+||||.+++++
T Consensus 80 v~G~v~~~~~-~~~v~~rL~Dv~~~~~l 106 (106)
T pfam04052 80 VVGSVTSSGD-GLTVEFRLYDVFSGQQL 106 (106)
T ss_pred EEEEEEECCC-EEEEEEEEEEECCCCCC
T ss_conf 9999997699-79999999980466479
No 26
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.83 E-value=1.9e-17 Score=133.90 Aligned_cols=225 Identities=23% Similarity=0.347 Sum_probs=159.6
Q ss_pred CCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEE-ECCCCCEEEEEEECCCCCCCCCEEEECCCCCEE
Q ss_conf 5441788751367644210012311455402688621764023455-768998489985034676443037711797179
Q gi|254780548|r 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251 (447)
Q Consensus 173 f~triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~-wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~ 251 (447)
-.-||.|++..-+-+ +||-.|.||...|.-|...+.- |+ -+-||++|+|. +..+||++|..+.+..+
T Consensus 234 V~~RvYFlsD~eG~G----nlYSvdldGkDlrrHTnFtdYY---~R~~nsDGkrIvFq-----~~GdIylydP~td~lek 301 (668)
T COG4946 234 VGERVYFLSDHEGVG----NLYSVDLDGKDLRRHTNFTDYY---PRNANSDGKRIVFQ-----NAGDIYLYDPETDSLEK 301 (668)
T ss_pred ECCEEEEEECCCCCC----CEEEECCCCCHHHHCCCCHHCC---CCCCCCCCCEEEEE-----CCCCEEEECCCCCCCEE
T ss_conf 743689976455756----1577426870253237701204---23368888689994-----38717986887673004
Q ss_pred EEECCC-----CCE--EEE-----EECC-CCCEEEEEEC--------------------------------------CCC
Q ss_conf 974379-----852--444-----5515-8955677413--------------------------------------787
Q gi|254780548|r 252 RIGNFR-----SMI--LAP-----RFSS-NGKRALISVQ--------------------------------------KDE 280 (447)
Q Consensus 252 ~~~~~~-----~~~--~~p-----~wSP-DG~~la~~~s--------------------------------------~~g 280 (447)
+-...+ .+. ..| .|++ +|..+++++- ++|
T Consensus 302 ldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSRGkaFi~~~~~~~~iqv~~~~~VrY~r~~~~~e~~vigt~dg 381 (668)
T COG4946 302 LDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSRGKAFIMRPWDGYSIQVGKKGGVRYRRIQVDPEGDVIGTNDG 381 (668)
T ss_pred EECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCEEEECCCCCEEEECCCCCCEEEEEECCCCCCEEEECCCC
T ss_conf 54388654563445203777866540467886899996471798877788058737777568999734786227861578
Q ss_pred CEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCE
Q ss_conf 30389984047741100257764320255216747899723776533157640256741112203530000468776888
Q gi|254780548|r 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360 (447)
Q Consensus 281 ~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~ 360 (447)
. -|-++|.+|++.+++...-+.-.+..-||||++++-..||. |||++++++++++.+-....+-..+-.|+|+++|
T Consensus 382 D-~l~iyd~~~~e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~---el~vididngnv~~idkS~~~lItdf~~~~nsr~ 457 (668)
T COG4946 382 D-KLGIYDKDGGEVKRIEKDLGNIEAVKVSPDGKKVVVANDRF---ELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRW 457 (668)
T ss_pred C-EEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCE---EEEEEEECCCCEEEECCCCCCEEEEEEECCCCEE
T ss_conf 6-68998168816788407866358998768886799976842---7999990599856733232341677887688606
Q ss_pred EEEEECCCC-CEEEEEEECCCCCEEEE-ECCCCCCCCEECCCCCEEEEEEEECCC
Q ss_conf 999971499-15799998899967996-627875543788789989999950898
Q gi|254780548|r 361 IAFTKFSGE-KFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGD 413 (447)
Q Consensus 361 Iaf~~~~~~-~~~i~~~~~~g~~~~~l-t~~~~~e~P~wSPDG~~i~f~~~~~g~ 413 (447)
|||.--.+- ..+|-+++.+|+..-.. |+..+|-+|+|-|||+++.|.+.|.-.
T Consensus 458 iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta~DfsPaFD~d~ryLYfLs~RsLd 512 (668)
T COG4946 458 IAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTAYDFSPAFDPDGRYLYFLSARSLD 512 (668)
T ss_pred EEEECCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCC
T ss_conf 9986686105536899962797389861786546675638887479997403569
No 27
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.66 E-value=5.6e-15 Score=117.30 Aligned_cols=103 Identities=17% Similarity=0.295 Sum_probs=41.7
Q ss_pred HHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEE---CCCCCCCC
Q ss_conf 997504455554417887513676442100123114554026886217640234557689984899850---34676443
Q gi|254780548|r 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY---DDEDILRV 239 (447)
Q Consensus 163 ~~~ltG~~G~f~triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~---~~~~~~~i 239 (447)
+..+.=.+-+..-||.|+... +||.-+.--..++.||.+.+ ++..|++||||++|||+.- ...+..++
T Consensus 39 M~n~~l~PDI~GD~IiFt~~D--------dlWe~slk~g~~~ritS~lG-Vvnn~kf~pdGrkvaf~rv~~~ss~~taDl 109 (668)
T COG4946 39 MKNYYLNPDIYGDRIIFTCCD--------DLWEYSLKDGKPLRITSGLG-VVNNPKFSPDGRKVAFSRVMLGSSLQTADL 109 (668)
T ss_pred HHHHHCCCCCCCCEEEEEECH--------HHHHHHHCCCCEEEEECCCC-EECCCCCCCCCCEEEEEEEEECCCCCCCCE
T ss_conf 553412986447679999645--------88776430597167753655-042661889986799999985378765327
Q ss_pred CEEEECCCCCEEEEECCCCCEE-EEEECCCCCEEEEE
Q ss_conf 0377117971799743798524-44551589556774
Q gi|254780548|r 240 YLMDTRIDRAPKRIGNFRSMIL-APRFSSNGKRALIS 275 (447)
Q Consensus 240 ~~~~~~~g~~~~~~~~~~~~~~-~p~wSPDG~~la~~ 275 (447)
|+++.+.|+ .++++-+..... -.-|+|||+-|+.+
T Consensus 110 y~v~~e~Ge-~kRiTyfGr~fT~VaG~~~dg~iiV~T 145 (668)
T COG4946 110 YVVPSEDGE-AKRITYFGRRFTRVAGWIPDGEIIVST 145 (668)
T ss_pred EEEECCCCC-EEEEEEECCCCCEEECCCCCCCEEEEE
T ss_conf 998578994-788998465332020007889789984
No 28
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.58 E-value=4.8e-11 Score=90.96 Aligned_cols=256 Identities=14% Similarity=0.153 Sum_probs=130.1
Q ss_pred CCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEE---ECCCCCEEEEEEECCCCCCCCCEEEEC--CCC
Q ss_conf 441788751367644210012311455402688621764023455---768998489985034676443037711--797
Q gi|254780548|r 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR---FSPNQQKVAYATYDDEDILRVYLMDTR--IDR 248 (447)
Q Consensus 174 ~triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~---wSpDG~~Iay~s~~~~~~~~i~~~~~~--~g~ 248 (447)
+.|..|+...... ... =|-.|.||. ...+-.. ..-.+|+ .+|+|+.+.-..|..+. ..++-.+-. .+.
T Consensus 45 d~~~LY~~~~~~~--~V~-a~~I~~~G~-Lt~~~~~--~~~g~P~~l~vd~~g~~l~vanY~~Gs-vsv~~l~~dG~lg~ 117 (330)
T PRK11028 45 DKRYLYVGVRPEF--RVL-SYRIADDGA-LTFAAES--ALPGSPTHISTDHQGRFLFSGSYNANC-VSVTPLDDFGLPVE 117 (330)
T ss_pred CCCEEEEEECCCC--CEE-EEEECCCCC-EEECCCC--CCCCCCEEEEECCCCCEEEEEECCCCE-EEEEEECCCCCCCC
T ss_conf 9999999986899--589-999889985-4886200--479986399984899999999848998-99999688995988
Q ss_pred CEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCC-CCCCCCCCCCCCC----CCE---EEECCCCEEEEEE
Q ss_conf 1799743798524445515895567741378730389984047-7411002577643----202---5521674789972
Q gi|254780548|r 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFIN----ISA---SYSPDSSQIVFES 320 (447)
Q Consensus 249 ~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~-~~~~~lT~~~~~d----~~p---~~spDG~~I~f~S 320 (447)
....+...++. -+..++|||+.++.+-- |.-.|+++.++. |++..... ..+. ..| .|+|||+..+-+.
T Consensus 118 ~~~~~~~~~~p-H~~~~~Pdg~~l~v~DL--G~D~I~~y~~~~~g~l~~~~~-~~~~~~~GsGPRH~~F~p~g~~~Yvvn 193 (330)
T PRK11028 118 PIQVIEGLDGC-HSANIDPDNRTLWVPCL--KEDRIRLFTLSDDGHLVAQEP-AEVTTVEGAGPRHMVFHPNQQYAYCVN 193 (330)
T ss_pred CEEEECCCCCC-CEEEECCCCCEEEEEEC--CCCEEEEEEECCCCCEEECCC-CCCCCCCCCCCCEEEECCCCCEEEEEE
T ss_conf 22120378979-88786799999999515--899899999789885656576-616059998982699868999999992
Q ss_pred CCCCCCCEEEEEECCCCCCEE---E-----EECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCC
Q ss_conf 377653315764025674111---2-----20353000046877688899997149915799998899967996627875
Q gi|254780548|r 321 DREGKEQLYVMQSNGSDQKRI---S-----QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392 (447)
Q Consensus 321 dr~G~~qiy~~~~~g~~~~rl---T-----~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~~~~ 392 (447)
.-++.-.+|.++..++..+.+ . +.+.....+-..||||+++.-+.+......+|.++.+++..+.+......
T Consensus 194 El~~tv~v~~~~~~~g~l~~~q~i~~lp~~~~~~~~aa~I~ispdGrflYvsnR~~nsIa~f~i~~~~g~l~~~~~~~tg 273 (330)
T PRK11028 194 ELNSSVDVWQIKDPHGEIECVQTLDIMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTE 273 (330)
T ss_pred CCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEECCCCCEEEEEEECCCCCEEEEEEECCCC
T ss_conf 68987999998089995788799952688778874305799989999999974899808999987999868998962157
Q ss_pred CCC---EECCCCCEEEEEEEECCCCCEEEEEEEC-CCCCEEECCCCCCCCCCCCC
Q ss_conf 543---7887899899999508987337999988-99714733678873675316
Q gi|254780548|r 393 QAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWV 443 (447)
Q Consensus 393 e~P---~wSPDG~~i~f~~~~~g~~~~~l~~~~~-~G~~~~~~~~~g~~~~P~Ws 443 (447)
+.| .++|||++++-+.+.. . .-.+|.+|. +|.- ..+..-.....|.|=
T Consensus 274 ~~PR~f~i~p~G~~L~vanq~S-~-~i~~f~id~~tG~L-t~~g~~~~g~~p~wv 325 (330)
T PRK11028 274 TQPRGFNIDHSGKYLIAAGQKS-H-HISVYEIDGETGLL-TEKGRYAVGQGPMWV 325 (330)
T ss_pred CCCCEEEECCCCCEEEEEECCC-C-CEEEEEECCCCCCE-EEEEECCCCCCCCEE
T ss_conf 8397379999999999971159-9-79999991899953-484110357898889
No 29
>pfam10282 Muc_lac_enz 3-carboxy-cis,cis-muconate lactonizing enzyme. This family includes the 3-carboxy-cis,cis-muconate lactonizing enzyme, which forms part of the beta-ketoadipate pathway in microbes. The structure of this protein adopts a seven bladed beta-propeller fold.
Probab=99.45 E-value=1.1e-09 Score=82.00 Aligned_cols=261 Identities=14% Similarity=0.171 Sum_probs=131.4
Q ss_pred CCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEE----ECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECC-CC
Q ss_conf 4417887513676442100123114554026886----217640234557689984899850346764430377117-97
Q gi|254780548|r 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT----PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-DR 248 (447)
Q Consensus 174 ~triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~----~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~-g~ 248 (447)
+.|+.|+........ .-.-|-.|.|....+.+- .+..+. .-+.+|||+.++-..|..+ .|-++.+.. |.
T Consensus 47 ~~~~LY~~~e~~~~g-~v~~f~i~~~~g~L~~~~~~~s~G~~Pc--~i~~~~~~~~l~~AnY~~g---~v~v~~l~~~G~ 120 (344)
T pfam10282 47 DGKTLYAVNETGEDG-GVSAFRIDPDTGKLTLLNTVPTGGASPC--HLSVDPDGRFLFVANYGGG---SVSVYPLDADGS 120 (344)
T ss_pred CCCEEEEEEEECCCC-EEEEEEECCCCCCEEEEEEEECCCCCCE--EEEECCCCCEEEEEECCCC---EEEEEEECCCCC
T ss_conf 999999998108996-6999998389980899367306999976--9999499999999974799---899998379995
Q ss_pred CEE--EEECCCC-----------CEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCC--C-CC-CCCCEEEEC
Q ss_conf 179--9743798-----------52444551589556774137873038998404774110025--7-76-432025521
Q gi|254780548|r 249 APK--RIGNFRS-----------MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--T-LF-INISASYSP 311 (447)
Q Consensus 249 ~~~--~~~~~~~-----------~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~--~-~~-~d~~p~~sp 311 (447)
... ....+.+ ..-...++|||+.|+.+--......+|.+|.+++.+...-. . .+ --..-.|+|
T Consensus 121 l~~~~~~~~~~g~g~~~~rQ~~~H~H~v~~~Pdg~~l~v~dLG~D~i~~~~~d~~~~~l~~~~~~~~~~GsGPRH~~f~~ 200 (344)
T pfam10282 121 LGEASQVVQHEGSGPNPERQEGPHAHSVVFDPDGKFLVVPDLGTDRIRVYRLDDAGGKLTEPASVKTPPGSGPRHLVFHP 200 (344)
T ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEEEECCCCCEEECCEEECCCCCCCEEEEECC
T ss_conf 33413789826899874435689662899848999999974999989999980898937776447169998970799979
Q ss_pred CCCEEEEEECCCCCCCEEEEEECCCCCCEE---E-----EECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCE
Q ss_conf 674789972377653315764025674111---2-----20353000046877688899997149915799998899967
Q gi|254780548|r 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRI---S-----QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383 (447)
Q Consensus 312 DG~~I~f~Sdr~G~~qiy~~~~~g~~~~rl---T-----~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~ 383 (447)
||+.++-+..-++.-.+|.++..++..+.+ . +.+....+.-..||||+++..+.+.....-+|.++.+++..
T Consensus 201 ~g~~~Yvv~Els~~v~v~~~~~~~g~l~~~~~i~~~p~~~~~~~~~a~I~ispdg~flYvSnRg~dsIs~f~i~~~~G~L 280 (344)
T pfam10282 201 DGKYAYVVNELSSTVTVFSYDPATGTLTELQTVSTLPEDFTGTNGAAAIRISPDGRFLYVSNRGHDSIAVFAVDEAGGTL 280 (344)
T ss_pred CCCEEEEEECCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEE
T ss_conf 99999999568998999998289981888148846899888985206999978999999986789819999980899959
Q ss_pred EEEECCCC-CCCC---EECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEECCCCCCCCCCCC
Q ss_conf 99662787-5543---78878998999995089873379999889971473367887367531
Q gi|254780548|r 384 RLLVEDSN-LQAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442 (447)
Q Consensus 384 ~~lt~~~~-~e~P---~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~~~~~~g~~~~P~W 442 (447)
+.+..-.. -..| .++|||++++-+ .+... .-.+|.+|........+...-.+-+|+|
T Consensus 281 ~~i~~~~t~G~~PR~f~i~~~G~~L~va-nq~s~-~v~vf~~d~~tG~L~~~~~~~~v~~P~c 341 (344)
T pfam10282 281 TLVERVSTEGDFPRDFNIDPSGKFLLVA-NQDSD-NVTVFERDPETGKLTLTGKDIPVPEPVC 341 (344)
T ss_pred EEEEEEECCCCCCCEEEECCCCCEEEEE-ECCCC-CEEEEEEECCCCCEEECCCEEECCCCEE
T ss_conf 9979998999987766998999999998-34799-1999999699997863587759999869
No 30
>KOG0266 consensus
Probab=99.41 E-value=3.6e-10 Score=85.09 Aligned_cols=220 Identities=19% Similarity=0.251 Sum_probs=123.8
Q ss_pred CCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEE-CCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEE
Q ss_conf 176402345576899848998503467644303771-1797179974379852444551589556774137873038998
Q gi|254780548|r 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT-RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287 (447)
Q Consensus 209 ~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~-~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~ 287 (447)
+....+..-+|||||+.|+ +-..+ ..|+++|+ ..+...+.+..+.....+-.|+|+| .++++.+.|+.-.||
T Consensus 201 ~h~~~v~~~~fs~d~~~l~--s~s~D--~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g-~~i~Sgs~D~tvriW-- 273 (456)
T KOG0266 201 GHTRGVSDVAFSPDGSYLL--SGSDD--KTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDG-NLLVSGSDDGTVRIW-- 273 (456)
T ss_pred CCCCCCCCEEECCCCCEEE--EECCC--CEEEEEECCCCCEEEEEECCCCCCEEEEEECCCC-CEEEEECCCCEEEEE--
T ss_conf 5776402434768887788--86489--7699864168861689960788861489973688-879996699809999--
Q ss_pred ECCCCCC-CCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCC---CEEEEECCC-CEEEEEECCCCCEEE
Q ss_conf 4047741-10025776432025521674789972377653315764025674---111220353-000046877688899
Q gi|254780548|r 288 DLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ---KRISQDKEA-SYFDPVWSPQGDLIA 362 (447)
Q Consensus 288 d~~~~~~-~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~---~rlT~~~~~-~~~~p~wSPdG~~Ia 362 (447)
|+.+++. +.|..+..-.+.-.|+|||+.|+=.| ..| .|.+.|+.++.- +.+.....- ....-.|||+|+.|+
T Consensus 274 d~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s-~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll 350 (456)
T KOG0266 274 DVRTGECVRKLKGHSDGISGLAFSPDGNLLVSAS-YDG--TIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLL 350 (456)
T ss_pred ECCCCEEEEEECCCCCCCEEEEECCCCCEEEEEC-CCC--EEEEEECCCCCCCEEECCCCCCCCCCEEEEEECCCCCEEE
T ss_conf 4689859452103579813799789997799854-797--5999989878400000023455676315789889997799
Q ss_pred EEECCCCCEEEEEEECCCCCEEEEECCCCC-----CCCEECCCCCEEEEEEEECCCCCEEEEEEECC-CCCEEECC-C-C
Q ss_conf 997149915799998899967996627875-----54378878998999995089873379999889-97147336-7-8
Q gi|254780548|r 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNL-----QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLIN-T-P 434 (447)
Q Consensus 363 f~~~~~~~~~i~~~~~~g~~~~~lt~~~~~-----e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~-G~~~~~~~-~-~ 434 (447)
-...++ .+.++++..+.......+..+ .++..+++|++| ++...++ .++..+.. +...+.+. + .
T Consensus 351 ~~~~d~---~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~sg~~d~----~v~~~~~~s~~~~~~l~~h~~ 422 (456)
T KOG0266 351 SASLDR---TLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLI-YSGSEDG----SVYVWDSSSGGILQRLEGHSK 422 (456)
T ss_pred EECCCC---CEEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCEE-EEEECCC----EEEEEECCCCCEEEEECCCCC
T ss_conf 961897---27888648875341553124676100666446787479-8321663----799984688751356548544
Q ss_pred CCCCCCCCCCCC
Q ss_conf 873675316557
Q gi|254780548|r 435 AYASDPQWVGFM 446 (447)
Q Consensus 435 g~~~~P~WsP~~ 446 (447)
..+...+|+|..
T Consensus 423 ~~~~~~~~~~~~ 434 (456)
T KOG0266 423 AAVSDLSSHPTE 434 (456)
T ss_pred CCEEEEECCCCC
T ss_conf 430200017886
No 31
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.38 E-value=6.6e-09 Score=76.67 Aligned_cols=263 Identities=17% Similarity=0.242 Sum_probs=138.7
Q ss_pred HHHCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCEEEEE
Q ss_conf 741562189999974046622578999841555420000232337778899999998999997504455-5544178875
Q gi|254780548|r 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG-DFNSRILFVS 181 (447)
Q Consensus 103 W~~~gad~lv~G~i~~~~~~~~~v~~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G-~f~triafv~ 181 (447)
|..-| ++|+.|.. +|. +++||..+++.+.. +.+.... ++...- ....+|+-.+
T Consensus 17 f~~~~-~~l~sg~~----Dg~----v~iw~~~~~~~~~~--~~~h~~~---------------i~~i~~~~~~~~i~~~~ 70 (289)
T cd00200 17 FSPDG-KLLATGSG----DGT----IKVWDLETGELLRT--LKGHTGP---------------VRDVAASADGTYLASGS 70 (289)
T ss_pred ECCCC-CEEEEECC----CCE----EEEEECCCCCEEEE--EECCCCC---------------EEEEEEECCCCEEEEEE
T ss_conf 94898-99999908----994----99999999919899--9478897---------------58999935999999997
Q ss_pred ECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEE
Q ss_conf 13676442100123114554026886217640234557689984899850346764430377117971799743798524
Q gi|254780548|r 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261 (447)
Q Consensus 182 ~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~ 261 (447)
.+ ..|.+.|.+..............+.+-.|+|+++.++-.+ . ...|.++++.+++....+..+.+...
T Consensus 71 ----~d---~~v~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~~~~-~---d~~i~i~~~~~~~~~~~~~~~~~~i~ 139 (289)
T cd00200 71 ----SD---KTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSS-R---DKTIKVWDVETGKCLTTLRGHTDWVN 139 (289)
T ss_pred ----CC---CEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEC-C---CCCEEEEECCCCCEEEEECCCCCCEE
T ss_conf ----99---9699975688828899927888488999999999999984-8---98189874058617776068889725
Q ss_pred EEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCC-CCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCE
Q ss_conf 44551589556774137873038998404774110-02577643202552167478997237765331576402567411
Q gi|254780548|r 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340 (447)
Q Consensus 262 ~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~-lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~r 340 (447)
.-.|+|+++.++ +...+|. |+++|+++++..+ +..+...-..-.|+|||+.++ ++...| .|++.+...+....
T Consensus 140 ~~~~~~~~~~i~-~~~~dg~--v~i~d~~~~~~~~~~~~h~~~i~~i~~~~~~~~~~-~~~~d~--~i~i~d~~~~~~~~ 213 (289)
T cd00200 140 SVAFSPDGTFVA-SSSQDGT--IKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLL-SSSSDG--TIKLWDLSTGKCLG 213 (289)
T ss_pred EEEECCCCCEEE-EECCCCE--EEEEECCCCCEEEEEEECCCCCEEEEECCCCCCCE-EECCCC--EEEEEECCCCCEEE
T ss_conf 999837998999-9738997--99999999949899986155632688889998147-415999--89999999992999
Q ss_pred EEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCE-EEEEC-CCCCCCCEECCCCCEEEEEEEECC
Q ss_conf 1220353000046877688899997149915799998899967-99662-787554378878998999995089
Q gi|254780548|r 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVE-DSNLQAPTWSPSGRSLIFSRKKDG 412 (447)
Q Consensus 341 lT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~-~~lt~-~~~~e~P~wSPDG~~i~f~~~~~g 412 (447)
.-...........|+|+|..++-...+ + .|++++...+.. ..+.. ......-.|+|||++|+- ...+|
T Consensus 214 ~~~~~~~~i~~i~~~~~~~~~~~~~~d-~--~i~i~d~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~t-~s~D~ 283 (289)
T cd00200 214 TLRGHENGVNSVAFSPDGYLLASGSED-G--TIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLAS-GSADG 283 (289)
T ss_pred EEECCCCEEEEEEECCCCCEEEEECCC-C--EEEEEECCCCEEEEEEECCCCCEEEEEEECCCCEEEE-EECCC
T ss_conf 991788507889817996599999299-9--8999999999099999589998999999189899999-93599
No 32
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.36 E-value=1.8e-09 Score=80.45 Aligned_cols=241 Identities=11% Similarity=0.129 Sum_probs=112.9
Q ss_pred CEEEEEECCCCCCCCEEEEEECCCCC-EEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEEC-CCCCEEEE
Q ss_conf 17887513676442100123114554-02688621764023455768998489985034676443037711-79717997
Q gi|254780548|r 176 RILFVSESVVSGIIKNSLCVMDRDGA-NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR-IDRAPKRI 253 (447)
Q Consensus 176 riafv~~~~~~~~~~~~l~i~d~DG~-n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~-~g~~~~~~ 253 (447)
+++||+....++ -.+|-+|.+|. .+.++....+.. ..-++||||+.+ |+.-+..+ .|-.+.+. +|. .+.+
T Consensus 2 ~~vYv~n~~s~g---I~v~~~d~~G~l~~~~~~~~~~np-s~laispd~~~L-Y~~~~~~~--~V~a~~I~~~G~-Lt~~ 73 (330)
T PRK11028 2 QIVYIASPESQQ---IHVWQLNHEGALTLLQVVDVPGQV-QPMVISPDKRYL-YVGVRPEF--RVLSYRIADDGA-LTFA 73 (330)
T ss_pred EEEEEECCCCCC---EEEEEECCCCCEEEEEEECCCCCC-CEEEECCCCCEE-EEEECCCC--CEEEEEECCCCC-EEEC
T ss_conf 299992898897---699998899975897887168996-408996999999-99986899--589999889985-4886
Q ss_pred ECCCCCEEEE---EECCCCCEEEEEECCCCCEEEEEEECCCCC--CCCCCCC-CCCCCCEEEECCCCEEEEEECCCCCCC
Q ss_conf 4379852444---551589556774137873038998404774--1100257-764320255216747899723776533
Q gi|254780548|r 254 GNFRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNT-LFINISASYSPDSSQIVFESDREGKEQ 327 (447)
Q Consensus 254 ~~~~~~~~~p---~wSPDG~~la~~~s~~g~~~I~~~d~~~~~--~~~lT~~-~~~d~~p~~spDG~~I~f~Sdr~G~~q 327 (447)
...+. ..+| +.+|+|+.|+.+...+|..-+|.++.+|.- ..++..+ ++. -+..++|||+.+ |+.|- |.-+
T Consensus 74 ~~~~~-~g~P~~l~vd~~g~~l~vanY~~Gsvsv~~l~~dG~lg~~~~~~~~~~~p-H~~~~~Pdg~~l-~v~DL-G~D~ 149 (330)
T PRK11028 74 AESAL-PGSPTHISTDHQGRFLFSGSYNANCVSVTPLDDFGLPVEPIQVIEGLDGC-HSANIDPDNRTL-WVPCL-KEDR 149 (330)
T ss_pred CCCCC-CCCCEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCEEEECCCCCC-CEEEECCCCCEE-EEEEC-CCCE
T ss_conf 20047-99863999848999999998489989999968899598822120378979-887867999999-99515-8998
Q ss_pred EEEEEECC-CCCCE-----EE-EECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEE------CCCCCCC
Q ss_conf 15764025-67411-----12-203530000468776888999971499157999988999679966------2787554
Q gi|254780548|r 328 LYVMQSNG-SDQKR-----IS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV------EDSNLQA 394 (447)
Q Consensus 328 iy~~~~~g-~~~~r-----lT-~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt------~~~~~e~ 394 (447)
||.+.++. +.... +. ..|.+- ...+++|||++...+..-++...+|.++..++..+.+. ++...+.
T Consensus 150 I~~y~~~~~g~l~~~~~~~~~~~~GsGP-RH~~F~p~g~~~YvvnEl~~tv~v~~~~~~~g~l~~~q~i~~lp~~~~~~~ 228 (330)
T PRK11028 150 IRLFTLSDDGHLVAQEPAEVTTVEGAGP-RHMVFHPNQQYAYCVNELNSSVDVWQIKDPHGEIECVQTLDIMPADFSDTR 228 (330)
T ss_pred EEEEEECCCCCEEECCCCCCCCCCCCCC-CEEEECCCCCEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCC
T ss_conf 9999978988565657661605999898-269986899999999268987999998089995788799952688778874
Q ss_pred ----CEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEEC
Q ss_conf ----3788789989999950898733799998899714733
Q gi|254780548|r 395 ----PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431 (447)
Q Consensus 395 ----P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~~~ 431 (447)
-..|||||++ |+++|+. ..-.+|.++.+|....++
T Consensus 229 ~aa~I~ispdGrfl-YvsnR~~-nsIa~f~i~~~~g~l~~~ 267 (330)
T PRK11028 229 WAADIHITPDGRHL-YACDRTA-SLISVFSVSEDGSVLSFE 267 (330)
T ss_pred CCEEEEECCCCCEE-EEECCCC-CEEEEEEECCCCCEEEEE
T ss_conf 30579998999999-9974899-808999987999868998
No 33
>pfam10282 Muc_lac_enz 3-carboxy-cis,cis-muconate lactonizing enzyme. This family includes the 3-carboxy-cis,cis-muconate lactonizing enzyme, which forms part of the beta-ketoadipate pathway in microbes. The structure of this protein adopts a seven bladed beta-propeller fold.
Probab=99.33 E-value=1.5e-08 Score=74.26 Aligned_cols=27 Identities=11% Similarity=0.361 Sum_probs=12.0
Q ss_pred EECCCCCEEEEEECCCCCEEEEEEECC
Q ss_conf 551589556774137873038998404
Q gi|254780548|r 264 RFSSNGKRALISVQKDEAMDIYSVDLQ 290 (447)
Q Consensus 264 ~wSPDG~~la~~~s~~g~~~I~~~d~~ 290 (447)
+.+|||+.|+.+...+|...+|.++.+
T Consensus 92 ~~~~~~~~l~~AnY~~g~v~v~~l~~~ 118 (344)
T pfam10282 92 SVDPDGRFLFVANYGGGSVSVYPLDAD 118 (344)
T ss_pred EECCCCCEEEEEECCCCEEEEEEECCC
T ss_conf 994999999999747998999983799
No 34
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.31 E-value=1.4e-08 Score=74.51 Aligned_cols=222 Identities=15% Similarity=0.184 Sum_probs=133.5
Q ss_pred EEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEE---ECCCCC----------EEEEEECCCCCEEEEEECCCCCEE
Q ss_conf 5576899848998503467644303771179717997---437985----------244455158955677413787303
Q gi|254780548|r 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI---GNFRSM----------ILAPRFSSNGKRALISVQKDEAMD 283 (447)
Q Consensus 217 P~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~---~~~~~~----------~~~p~wSPDG~~la~~~s~~g~~~ 283 (447)
-+.++||+.+.-.+|..+ .|-++.+...+....+ ..+.+. .-...+.|||+.|+..- =|.-.
T Consensus 94 vsvd~~g~~vf~AnY~~g---~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~D--LG~Dr 168 (346)
T COG2706 94 VSVDEDGRFVFVANYHSG---SVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPD--LGTDR 168 (346)
T ss_pred EEECCCCCEEEEEECCCC---EEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCEEEEEE--CCCCE
T ss_conf 988788989999870576---7999873668950362002314788877010378653510079988999851--69866
Q ss_pred EEEEECCCCCCCCCCCCCCCC----CCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEE--------EECCCCEEE
Q ss_conf 899840477411002577643----20255216747899723776533157640256741112--------203530000
Q gi|254780548|r 284 IYSVDLQSNATERLTNTLFIN----ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--------QDKEASYFD 351 (447)
Q Consensus 284 I~~~d~~~~~~~~lT~~~~~d----~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT--------~~~~~~~~~ 351 (447)
|++++++.|.+...+...--. ..-.|+|+|+..+-+..-++.-.+|.++..+++.++|- |.+....+.
T Consensus 169 i~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aa 248 (346)
T COG2706 169 IFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAA 248 (346)
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEE
T ss_conf 99998656863403310128998862389859986899984018789999976887678874200247544689974257
Q ss_pred EEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCC-CCC---EECCCCCEEEEEEEECCCCCEEEEEEECCCCC
Q ss_conf 46877688899997149915799998899967996627875-543---78878998999995089873379999889971
Q gi|254780548|r 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427 (447)
Q Consensus 352 p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~~~~-e~P---~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~ 427 (447)
-..||||+.+.-+.+.-...-+|.++.+|+..+.+...... ..| .++|+|++++-+ .+++.. ..+|.+|-.-..
T Consensus 249 Ihis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa-~q~sd~-i~vf~~d~~TG~ 326 (346)
T COG2706 249 IHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAA-NQKSDN-ITVFERDKETGR 326 (346)
T ss_pred EEECCCCCEEEEECCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCEECCCCCEEEEE-CCCCCC-EEEEEECCCCCE
T ss_conf 999789888999558887089999868999899999850578587531447999899997-257984-899998588762
Q ss_pred EEECCCCCCCCCCCCCCC
Q ss_conf 473367887367531655
Q gi|254780548|r 428 ETLINTPAYASDPQWVGF 445 (447)
Q Consensus 428 ~~~~~~~g~~~~P~WsP~ 445 (447)
..++.....+.+|.|-=|
T Consensus 327 L~~~~~~~~~p~Pvcv~f 344 (346)
T COG2706 327 LTLLGRYAVVPEPVCVKF 344 (346)
T ss_pred EEECCCCCCCCCCEEEEE
T ss_conf 775231117799679997
No 35
>KOG0271 consensus
Probab=99.31 E-value=2.8e-10 Score=85.82 Aligned_cols=123 Identities=16% Similarity=0.235 Sum_probs=71.3
Q ss_pred CCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCE-EEEECCCCCEEEEEE
Q ss_conf 4421001231145540268862176402345576899848998503467644303771179717-997437985244455
Q gi|254780548|r 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRF 265 (447)
Q Consensus 187 ~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~-~~~~~~~~~~~~p~w 265 (447)
+...-+|| |.|-+.|....+++...+.+-+|||||++||=-+ ...+|-++|..+|+.. +.+..++-...+-+|
T Consensus 135 GD~TvR~W--D~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~----~dg~I~lwdpktg~~~g~~l~gH~K~It~Law 208 (480)
T KOG0271 135 GDTTVRLW--DLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGS----KDGSIRLWDPKTGQQIGRALRGHKKWITALAW 208 (480)
T ss_pred CCCEEEEE--CCCCCCCCEEECCCCCEEEEEEECCCCCHHHCCC----CCCEEEEECCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 87238963--2677775202237762799998889966200235----68707986587888414446676655258742
Q ss_pred C-----CCCCEEEEEECCCCCEEEEEEECCCCCCCC-CCCCCCCCCCEEEECCCCEEEEEE
Q ss_conf 1-----589556774137873038998404774110-025776432025521674789972
Q gi|254780548|r 266 S-----SNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFES 320 (447)
Q Consensus 266 S-----PDG~~la~~~s~~g~~~I~~~d~~~~~~~~-lT~~~~~d~~p~~spDG~~I~f~S 320 (447)
- |+++++| +.++||+..|| |+..+...+ |..|-...+-..|. |+-+.|++
T Consensus 209 ep~hl~p~~r~la-s~skDg~vrIW--d~~~~~~~~~lsgHT~~VTCvrwG--G~gliySg 264 (480)
T KOG0271 209 EPLHLVPPCRRLA-SSSKDGSVRIW--DTKLGTCVRTLSGHTASVTCVRWG--GEGLIYSG 264 (480)
T ss_pred CCCCCCCCCCCEE-CCCCCCCEEEE--ECCCCEEEEEECCCCCCEEEEEEC--CCCEEEEC
T ss_conf 1444488743110-12689978999--714746999803675633799976--87557743
No 36
>KOG0973 consensus
Probab=99.30 E-value=5.7e-10 Score=83.77 Aligned_cols=109 Identities=15% Similarity=0.264 Sum_probs=73.6
Q ss_pred EEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEE
Q ss_conf 68862176402345576899848998503467644303771179717997437985244455158955677413787303
Q gi|254780548|r 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283 (447)
Q Consensus 204 ~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~ 283 (447)
..++.+++..+..-.||||+..+|=+++++ .|-+++..+.+..+.+..+.+.....+|.|-|+.+| +.+.|...-
T Consensus 122 ~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~Dn----sViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~A-SqsdDrtik 196 (942)
T KOG0973 122 VSILRGHDSDVLDVNWSPDDSLLVSVSLDN----SVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFA-SQSDDRTLK 196 (942)
T ss_pred EEEEECCCCCCCEECCCCCCCEEEEECCCC----EEEEECCCCCEEEEEEECCCCCCCCEEECCCCCEEE-EECCCCEEE
T ss_conf 999824877611000278860899850353----299983620000244401335436548888557355-623883499
Q ss_pred EEEEECCCCCCCCCCCCCC------CCCCEEEECCCCEEEE
Q ss_conf 8998404774110025776------4320255216747899
Q gi|254780548|r 284 IYSVDLQSNATERLTNTLF------INISASYSPDSSQIVF 318 (447)
Q Consensus 284 I~~~d~~~~~~~~lT~~~~------~d~~p~~spDG~~I~f 318 (447)
+|..+ +-+-.+.+|.... .-..++|||||+.|+-
T Consensus 197 vwrt~-dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las 236 (942)
T KOG0973 197 VWRTS-DWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLAS 236 (942)
T ss_pred EEECC-CCEEEEEECCCHHHCCCCCEEEECCCCCCCCEECC
T ss_conf 99815-64046740462321877423543464898674114
No 37
>KOG0271 consensus
Probab=99.29 E-value=4.5e-10 Score=84.51 Aligned_cols=231 Identities=16% Similarity=0.272 Sum_probs=98.8
Q ss_pred EEEEC--CCCCEEEEEEECCCCCEEEEEEC-----CCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEE
Q ss_conf 12311--45540268862176402345576-----899848998503467644303771179717997437985244455
Q gi|254780548|r 193 LCVMD--RDGANIRYLTPSRDQILFEPRFS-----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265 (447)
Q Consensus 193 l~i~d--~DG~n~~~l~~~~~~~~~sP~wS-----pDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~w 265 (447)
|.+-| .++.-.+.|..+...| .+-+|- |..+++|-.| ..+ .+.+.|+..+.....+..+........|
T Consensus 181 I~lwdpktg~~~g~~l~gH~K~I-t~Lawep~hl~p~~r~las~s--kDg--~vrIWd~~~~~~~~~lsgHT~~VTCvrw 255 (480)
T KOG0271 181 IRLWDPKTGQQIGRALRGHKKWI-TALAWEPLHLVPPCRRLASSS--KDG--SVRIWDTKLGTCVRTLSGHTASVTCVRW 255 (480)
T ss_pred EEEECCCCCCCCCCCCCCCCCCE-EEEEECCCCCCCCCCCEECCC--CCC--CEEEEECCCCEEEEEECCCCCCEEEEEE
T ss_conf 79865878884144466766552-587421444488743110126--899--7899971474699980367563379997
Q ss_pred CCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCC-CC-----C-----CEEEECCCC--------------------
Q ss_conf 1589556774137873038998404774110025776-43-----2-----025521674--------------------
Q gi|254780548|r 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-IN-----I-----SASYSPDSS-------------------- 314 (447)
Q Consensus 266 SPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~-~d-----~-----~p~~spDG~-------------------- 314 (447)
- |.-+.|+.++|....+|... +|.-.+.|..|.. ++ + ..+|-|-|+
T Consensus 256 G--G~gliySgS~DrtIkvw~a~-dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~ 332 (480)
T KOG0271 256 G--GEGLIYSGSQDRTIKVWRAL-DGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVL 332 (480)
T ss_pred C--CCCEEEECCCCCEEEEEECC-CHHHHHHHCCCCHHEEEEECCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 6--87557743778448999856-50577762153000211331423332226656445667980788899998888764
Q ss_pred -----EEEEEECCCCCCCEEEEEEC--CCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEE
Q ss_conf -----78997237765331576402--56741112203530000468776888999971499157999988999679966
Q gi|254780548|r 315 -----QIVFESDREGKEQLYVMQSN--GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387 (447)
Q Consensus 315 -----~I~f~Sdr~G~~qiy~~~~~--g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt 387 (447)
+++--||- -++|..+.. .....|.| +...-.....+||||++||-.+.+.. +-+.+-.+| +.|+
T Consensus 333 ~~~~erlVSgsDd---~tlflW~p~~~kkpi~rmt-gHq~lVn~V~fSPd~r~IASaSFDkS---VkLW~g~tG--k~la 403 (480)
T KOG0271 333 KDSGERLVSGSDD---FTLFLWNPFKSKKPITRMT-GHQALVNHVSFSPDGRYIASASFDKS---VKLWDGRTG--KFLA 403 (480)
T ss_pred CCCCCEEEEECCC---CEEEEECCCCCCCCHHHHH-CHHHHEEEEEECCCCCEEEEEECCCC---EEEEECCCC--CHHH
T ss_conf 3375324785489---5499865602366055430-20312146898898648987424641---466407776--4134
Q ss_pred CCC-CC---CCCEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEECC-CCCCCCCCCCCC
Q ss_conf 278-75---5437887899899999508987337999988997147336-788736753165
Q gi|254780548|r 388 EDS-NL---QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQWVG 444 (447)
Q Consensus 388 ~~~-~~---e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~~~~-~~g~~~~P~WsP 444 (447)
.-+ +. -.-.||.|.|-|+- ...+ ...++|.+... +-..-++ ..-++..-.|||
T Consensus 404 sfRGHv~~VYqvawsaDsRLlVS-~SkD--sTLKvw~V~tk-Kl~~DLpGh~DEVf~vDwsp 461 (480)
T KOG0271 404 SFRGHVAAVYQVAWSADSRLLVS-GSKD--STLKVWDVRTK-KLKQDLPGHADEVFAVDWSP 461 (480)
T ss_pred HHHHCCCEEEEEEECCCCCEEEE-CCCC--CEEEEEEEEEE-EECCCCCCCCCEEEEEEECC
T ss_conf 33200012478776067527997-3788--63789986400-20012899875279987458
No 38
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.28 E-value=1.1e-08 Score=75.32 Aligned_cols=234 Identities=17% Similarity=0.235 Sum_probs=136.6
Q ss_pred EEEECCCCCE-EEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCE
Q ss_conf 1231145540-268862176402345576899848998503467644303771179717997437985244455158955
Q gi|254780548|r 193 LCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271 (447)
Q Consensus 193 l~i~d~DG~n-~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~ 271 (447)
|.+-|.+-.. .+.+..... .+..-+|+|||+.|+-.+. + ..|.++++.+++....+..+.+...+-.|+|+++.
T Consensus 33 v~iw~~~~~~~~~~~~~h~~-~i~~i~~~~~~~~i~~~~~-d---~~v~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~ 107 (289)
T cd00200 33 IKVWDLETGELLRTLKGHTG-PVRDVAASADGTYLASGSS-D---KTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRI 107 (289)
T ss_pred EEEEECCCCCEEEEEECCCC-CEEEEEEECCCCEEEEEEC-C---CEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCE
T ss_conf 99999999919899947889-7589999359999999979-9---96999756888288999278884889999999999
Q ss_pred EEEEECCCCCEEEEEEECCCCCCCC-CCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEE
Q ss_conf 6774137873038998404774110-025776432025521674789972377653315764025674111220353000
Q gi|254780548|r 272 ALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350 (447)
Q Consensus 272 la~~~s~~g~~~I~~~d~~~~~~~~-lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~ 350 (447)
++ +.+.++...+| ++..++... +..+...-..-.|+|+++.|+ +....|. |++.+.+..+..+..........
T Consensus 108 l~-~~~~d~~i~i~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~-~~~~dg~--v~i~d~~~~~~~~~~~~h~~~i~ 181 (289)
T cd00200 108 LS-SSSRDKTIKVW--DVETGKCLTTLRGHTDWVNSVAFSPDGTFVA-SSSQDGT--IKLWDLRTGKCVATLTGHTGEVN 181 (289)
T ss_pred EE-EECCCCCEEEE--ECCCCCEEEEECCCCCCEEEEEECCCCCEEE-EECCCCE--EEEEECCCCCEEEEEEECCCCCE
T ss_conf 99-98489818987--4058617776068889725999837998999-9738997--99999999949899986155632
Q ss_pred EEEECCCCCEEEEEECCCCCEEEEEEECCCCCE-EEEEC-CCCCCCCEECCCCCEEEEEEEECCCCCEEEEEEEC-CCCC
Q ss_conf 046877688899997149915799998899967-99662-78755437887899899999508987337999988-9971
Q gi|254780548|r 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRN 427 (447)
Q Consensus 351 ~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~-~~lt~-~~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~-~G~~ 427 (447)
.-.|+|++..++.. ..++ .|.++++..+.. ..+.. ......-.|+|||+.++- ...++ .|+..+. +++.
T Consensus 182 ~i~~~~~~~~~~~~-~~d~--~i~i~d~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~-~~~d~----~i~i~d~~~~~~ 253 (289)
T cd00200 182 SVAFSPDGEKLLSS-SSDG--TIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLAS-GSEDG----TIRVWDLRTGEC 253 (289)
T ss_pred EEEECCCCCCCEEE-CCCC--EEEEEECCCCCEEEEEECCCCEEEEEEECCCCCEEEE-ECCCC----EEEEEECCCCEE
T ss_conf 68888999814741-5999--8999999999299999178850788981799659999-92999----899999999909
Q ss_pred EEECC-CCCCCCCCCCCCC
Q ss_conf 47336-7887367531655
Q gi|254780548|r 428 ETLIN-TPAYASDPQWVGF 445 (447)
Q Consensus 428 ~~~~~-~~g~~~~P~WsP~ 445 (447)
...+. ..+.+..-+|+|-
T Consensus 254 ~~~~~~h~~~V~~~~~~~~ 272 (289)
T cd00200 254 VQTLSGHTNSVTSLAWSPD 272 (289)
T ss_pred EEEEECCCCCEEEEEEECC
T ss_conf 9999589998999999189
No 39
>KOG0266 consensus
Probab=99.26 E-value=1.9e-08 Score=73.68 Aligned_cols=216 Identities=16% Similarity=0.211 Sum_probs=133.1
Q ss_pred EEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCC
Q ss_conf 00123114554026886217640234557689984899850346764430377117971799743798524445515895
Q gi|254780548|r 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270 (447)
Q Consensus 191 ~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~ 270 (447)
.+||-.-.+|.+.+.+. ++...+.+-.|+|+|+.|+-.++ + ..|.+.|+.++...+.+..+.+...+-+|+|||+
T Consensus 227 iriwd~~~~~~~~~~l~-gH~~~v~~~~f~p~g~~i~Sgs~--D--~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~ 301 (456)
T KOG0266 227 LRIWDLKDDGRNLKTLK-GHSTYVTSVAFSPDGNLLVSGSD--D--GTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGN 301 (456)
T ss_pred EEEEECCCCCEEEEEEC-CCCCCEEEEEECCCCCEEEEECC--C--CEEEEEECCCCEEEEEECCCCCCCEEEEECCCCC
T ss_conf 99864168861689960-78886148997368887999669--9--8099994689859452103579813799789997
Q ss_pred EEEEEECCCCCEEEEEEECCCCCC---CCCCCCCC--CCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEC
Q ss_conf 567741378730389984047741---10025776--4320255216747899723776533157640256741112203
Q gi|254780548|r 271 RALISVQKDEAMDIYSVDLQSNAT---ERLTNTLF--INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345 (447)
Q Consensus 271 ~la~~~s~~g~~~I~~~d~~~~~~---~~lT~~~~--~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~ 345 (447)
.|+-. +.||...|| |+.++.. +.+..... ...+..|+|+|+.|+-.++. + ++-..++..+...+.....
T Consensus 302 ~l~s~-s~d~~i~vw--d~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d-~--~~~~w~l~~~~~~~~~~~~ 375 (456)
T KOG0266 302 LLVSA-SYDGTIRVW--DLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLD-R--TLKLWDLRSGKSVGTYTGH 375 (456)
T ss_pred EEEEE-CCCCEEEEE--ECCCCCCCEEECCCCCCCCCCEEEEEECCCCCEEEEECCC-C--CEEEEECCCCCCCCEEECC
T ss_conf 79985-479759999--8987840000002345567631578988999779996189-7--2788864887534155312
Q ss_pred C---CCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCC---CCCCCEECCCCCEEEEEEEECCCCCEEEE
Q ss_conf 5---30000468776888999971499157999988999679966278---75543788789989999950898733799
Q gi|254780548|r 346 E---ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS---NLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419 (447)
Q Consensus 346 ~---~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~~---~~e~P~wSPDG~~i~f~~~~~g~~~~~l~ 419 (447)
. .....+..++.|++|+ +...++ .|++.++.++...+..++. ....++|+|....++..+... +....+|
T Consensus 376 ~~~~~~~~~~~~~~~~~~i~-sg~~d~--~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~-d~~~~~w 451 (456)
T KOG0266 376 SNLVRCIFSPTLSTGGKLIY-SGSEDG--SVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTENLIASSSFEG-DGLIRLW 451 (456)
T ss_pred CCCCCCEEEEECCCCCCEEE-EEECCC--EEEEEECCCCCEEEEECCCCCCCEEEEECCCCCCEEEECCCCC-CCEEEEE
T ss_conf 46761006664467874798-321663--7999846887513565485444302000178867487325688-8668987
Q ss_pred EE
Q ss_conf 99
Q gi|254780548|r 420 SI 421 (447)
Q Consensus 420 ~~ 421 (447)
..
T Consensus 452 ~~ 453 (456)
T KOG0266 452 KY 453 (456)
T ss_pred EC
T ss_conf 42
No 40
>KOG0318 consensus
Probab=99.25 E-value=6.9e-09 Score=76.53 Aligned_cols=70 Identities=21% Similarity=0.360 Sum_probs=51.8
Q ss_pred CEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEE---CCCCCEEEEEECCCCCEEEEEECCCCCEEEEEE
Q ss_conf 023455768998489985034676443037711797179974---379852444551589556774137873038998
Q gi|254780548|r 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287 (447)
Q Consensus 213 ~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~---~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~ 287 (447)
.+..-++||||.+.|=++. ..++|++|-.+|+..-.+. .++|..++-+||||+++++- .+.|....||-+
T Consensus 192 FV~~VRysPDG~~Fat~gs----Dgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T-~SaDkt~KIWdV 264 (603)
T KOG0318 192 FVNCVRYSPDGSRFATAGS----DGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLT-VSADKTIKIWDV 264 (603)
T ss_pred CEEEEEECCCCCEEEEECC----CCCEEEECCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEE-ECCCCEEEEEEE
T ss_conf 2324898899875998527----961999758876689881578775552799998898756898-528851898871
No 41
>KOG0272 consensus
Probab=99.19 E-value=3.3e-09 Score=78.71 Aligned_cols=180 Identities=13% Similarity=0.198 Sum_probs=99.2
Q ss_pred EEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCC--CCEEEEEECCCCCEEEEEEECCC
Q ss_conf 2345576899848998503467644303771179717997437985244455158--95567741378730389984047
Q gi|254780548|r 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN--GKRALISVQKDEAMDIYSVDLQS 291 (447)
Q Consensus 214 ~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPD--G~~la~~~s~~g~~~I~~~d~~~ 291 (447)
+..-.||+|++.||--|+. +..++|.. ........+-.+.+...+..|+|. +..+| +.+.||...||.++-+
T Consensus 178 is~~~fS~ds~~laT~sws--G~~kvW~~--~~~~~~~~l~gH~~~v~~~~fhP~~~~~~la-t~s~Dgtvklw~~~~e- 251 (459)
T KOG0272 178 ISGCSFSRDSKHLATGSWS--GLVKVWSV--PQCNLLQTLRGHTSRVGAAVFHPVDSDLNLA-TASADGTVKLWKLSQE- 251 (459)
T ss_pred CEEEEEECCCCEEEEEECC--CCEEEEEC--CCCCEEEEEECCCCCEEEEEECCCCCCCCEE-EECCCCCEEEECCCCC-
T ss_conf 2036860588758985237--73367624--8864268982552413247971277766156-6416775643216787-
Q ss_pred CCCCCCCCCCCCCCCEEEECCCCEEEEEE-CCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCC
Q ss_conf 74110025776432025521674789972-37765331576402567411122035300004687768889999714991
Q gi|254780548|r 292 NATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370 (447)
Q Consensus 292 ~~~~~lT~~~~~d~~p~~spDG~~I~f~S-dr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~ 370 (447)
..+.+|+.|........|.|+|+.|+-.| |.+ ..|| |+.++..-.+-.+......+-+|-|||..++--..+.-
T Consensus 252 ~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~t--WRlW--D~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~- 326 (459)
T KOG0272 252 TPLQDLEGHLARVSRVAFHPSGKFLGTASFDST--WRLW--DLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSL- 326 (459)
T ss_pred CCHHHHHCCHHHHEEEEECCCCCEEEECCCCCC--HHHC--CCCCCHHHHHHCCCCCCCCEEEECCCCCEEECCCCCCH-
T ss_conf 416654133342101366688764421135531--3030--01222366764255565313686378855652676310-
Q ss_pred EEEEEEECCCCCEEEEECCCCCC--CCEECCCCCEEEE
Q ss_conf 57999988999679966278755--4378878998999
Q gi|254780548|r 371 FAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIF 406 (447)
Q Consensus 371 ~~i~~~~~~g~~~~~lt~~~~~e--~P~wSPDG~~i~f 406 (447)
-.+.|+.++.-.+.-++...| +..|||||.+|+-
T Consensus 327 --~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lAT 362 (459)
T KOG0272 327 --GRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLAT 362 (459)
T ss_pred --HHEEECCCCCEEEEECCCCCCEEEEEECCCCEEEEE
T ss_conf --100221568579986135640256767788458740
No 42
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.14 E-value=5.9e-08 Score=70.33 Aligned_cols=269 Identities=17% Similarity=0.161 Sum_probs=140.8
Q ss_pred HHHHCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCEE
Q ss_conf 8741562189999974046622578999841555420000232337778899999998999997504455---5544178
Q gi|254780548|r 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG---DFNSRIL 178 (447)
Q Consensus 102 ~W~~~gad~lv~G~i~~~~~~~~~v~~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G---~f~tria 178 (447)
.|+.-|.-..+.. . .+.....+.|+++. + .+....+.+....|...+|+++....+...-..| .|..++.
T Consensus 66 ~~spdg~~~~~~~---~--~~~~~~~l~l~~~~-g-~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (620)
T COG1506 66 RWSPDGSVLAFVS---T--DGGRVAQLYLVDVG-G-LITKTAFGVSDARWSPDGDRIAFLTAEGASKRDGGDHLFVDRLP 138 (620)
T ss_pred EECCCCCEEEEEC---C--CCCCCEEEEEEECC-C-CEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCE
T ss_conf 0789997899854---7--88753169996237-7-40342134332220666873145313224445775322555641
Q ss_pred EEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCC-CCC--CCCEEEECCCCCEEEEEC
Q ss_conf 87513676442100123114554026886217640234557689984899850346-764--430377117971799743
Q gi|254780548|r 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DIL--RVYLMDTRIDRAPKRIGN 255 (447)
Q Consensus 179 fv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~-~~~--~i~~~~~~~g~~~~~~~~ 255 (447)
+..... +.....+|+.|..+ -.+.+...+.. +.+++|.+|+..++.+..... ... ..++... .......++.
T Consensus 139 ~~~~~~--g~~~~~l~~~d~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 213 (620)
T COG1506 139 VWFDGR--GGERSDLYVVDIES-KLIKLGLGNLD-VVSFATDGDGRLVASIRLDDDADPWVTNLYVLIE-GNGELESLTP 213 (620)
T ss_pred EEECCC--CCCCCCEEEEECCC-CEEECCCCCCC-CCEEEECCCCCEEEEEEECCCCCCCEEEEEEECC-CCCCEEEECC
T ss_conf 898778--87524119980686-11102568887-1157856987336764314566875454344115-7873488657
Q ss_pred CCCCEEEEEECCCCCEEEEEECCCCC-----EEEEEEECCCCCCCCCCCCCC--CCCCE-EEECCCCEEEEEECC-CCCC
Q ss_conf 79852444551589556774137873-----038998404774110025776--43202-552167478997237-7653
Q gi|254780548|r 256 FRSMILAPRFSSNGKRALISVQKDEA-----MDIYSVDLQSNATERLTNTLF--INISA-SYSPDSSQIVFESDR-EGKE 326 (447)
Q Consensus 256 ~~~~~~~p~wSPDG~~la~~~s~~g~-----~~I~~~d~~~~~~~~lT~~~~--~d~~p-~~spDG~~I~f~Sdr-~G~~ 326 (447)
.++....+.|.+||+.+++....... ..++.++.+.+.......... ....+ .+.-++..++|...+ .|..
T Consensus 214 ~~~~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 293 (620)
T COG1506 214 GEGSISKLAFDADGKSIALLGTESDRGLAEGDFILLLDGELGEVDGDLSSGDDTRGAWAVEGGLDGDGLLFIATDGGGSS 293 (620)
T ss_pred CCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCEECCCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCE
T ss_conf 87630033326898737897315878842323124312014613313565765445432202327874799994478835
Q ss_pred CEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCC-CEEEEEEECCCCCEEEEE
Q ss_conf 3157640256741112203530000468776888999971499-157999988999679966
Q gi|254780548|r 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQERLLV 387 (447)
Q Consensus 327 qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~-~~~i~~~~~~g~~~~~lt 387 (447)
.++.+...++....+. ...+. -+.++.+|+.+++....-. ..++|+++. +...+++
T Consensus 294 ~l~~~~~~~~~~~~~~-~~~~~--v~~f~~~~~~~~~~~s~~~~p~~i~~~~~--~~~~~~~ 350 (620)
T COG1506 294 PLFRVDDLGGGVEGLS-GDDGG--VPGFDVDGRKLALAYSSPTEPPEIYLYDR--GEEAKLT 350 (620)
T ss_pred EEEEECCCCCCCEECC-CCCCE--EEEEECCCCEEEEEECCCCCCCEEEEECC--CCCEEEC
T ss_conf 7886315555301004-78740--78783169889999616999835999757--8620321
No 43
>KOG0772 consensus
Probab=99.14 E-value=3.4e-09 Score=78.59 Aligned_cols=247 Identities=14% Similarity=0.161 Sum_probs=133.4
Q ss_pred EEEEEECCCCCE-----EEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCE----------EEEEC
Q ss_conf 001231145540-----268862176402345576899848998503467644303771179717----------99743
Q gi|254780548|r 191 NSLCVMDRDGAN-----IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP----------KRIGN 255 (447)
Q Consensus 191 ~~l~i~d~DG~n-----~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~----------~~~~~ 255 (447)
|.+..-|+-|-+ -|+|...-...+.+-+|||.|..|+.+|- . .++-++|-. |... +-+.+
T Consensus 189 y~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg---~-aqakl~DRd-G~~~~e~~KGDQYI~Dm~n 263 (641)
T KOG0772 189 YTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSG---S-AQAKLLDRD-GFEIVEFSKGDQYIRDMYN 263 (641)
T ss_pred CEEEEEECCCCCCCCHHHHCCCCCCCCCCCEEEECCCCCEEEEEEC---C-CCEEEECCC-CCEEEEEECCCHHHHHHHC
T ss_conf 1488875166545442210057655563221441588986999955---7-522677367-7535654053344454331
Q ss_pred CCCCE---EEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCC------CCCCCCEEEECCCCEEEEEECCCCCC
Q ss_conf 79852---4445515895567741378730389984047741100257------76432025521674789972377653
Q gi|254780548|r 256 FRSMI---LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT------LFINISASYSPDSSQIVFESDREGKE 326 (447)
Q Consensus 256 ~~~~~---~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~------~~~d~~p~~spDG~~I~f~Sdr~G~~ 326 (447)
.+|+. -...|.|+.+..+.+.+.||...||-++-.- ...++-.. +-+-++-+|+|||+.|+-.- -.|+-
T Consensus 264 TKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k-~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc-~DGSI 341 (641)
T KOG0772 264 TKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTK-SQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGC-LDGSI 341 (641)
T ss_pred CCCCEEEEECCCCCCCCCCCEEEECCCCCEEEEECCCCH-HHEEEEEECCCCCCCCCCEEEECCCCCCHHHHCC-CCCCE
T ss_conf 577145663133366762426873277727887347753-0126776536788635740440278865221100-47716
Q ss_pred CEEEEEECCCCCCEEEE---ECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCC-CCC----CEEC
Q ss_conf 31576402567411122---035300004687768889999714991579999889996799662787-554----3788
Q gi|254780548|r 327 QLYVMQSNGSDQKRISQ---DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQA----PTWS 398 (447)
Q Consensus 327 qiy~~~~~g~~~~rlT~---~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~~~-~e~----P~wS 398 (447)
|+|-..--+.++.-... ..........||+||+.++ ++..++. +-++|+..-.+-+.+..++ .-. -.||
T Consensus 342 Q~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~Ll-SRg~D~t--LKvWDLrq~kkpL~~~tgL~t~~~~tdc~FS 418 (641)
T KOG0772 342 QIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLL-SRGFDDT--LKVWDLRQFKKPLNVRTGLPTPFPGTDCCFS 418 (641)
T ss_pred EEEECCCCCCCCCEEEEECCCCCCCEEEEEECCCCCHHH-HCCCCCC--EEEEECCCCCCCHHHHCCCCCCCCCCCCCCC
T ss_conf 665358743165068630237878612799646653033-2368873--2464232435322343178765778750217
Q ss_pred CCCCEEEEE-EEECCCCCEEEEEEECCCC-CEEECCCC-CCCCCCCCCCCCC
Q ss_conf 789989999-9508987337999988997-14733678-8736753165579
Q gi|254780548|r 399 PSGRSLIFS-RKKDGDTGSKLYSIDLNGR-NETLINTP-AYASDPQWVGFMD 447 (447)
Q Consensus 399 PDG~~i~f~-~~~~g~~~~~l~~~~~~G~-~~~~~~~~-g~~~~P~WsP~~~ 447 (447)
||-+.|+-- +...+...+.|+..|..-- ....+..+ ..+..-.|.|-||
T Consensus 419 Pd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLN 470 (641)
T KOG0772 419 PDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPKLN 470 (641)
T ss_pred CCCEEEEECCCCCCCCCCCEEEEEECCCEEEEEEECCCCCEEEEEEECCHHH
T ss_conf 8742798345456887775479974141135798547874378886051233
No 44
>pfam02897 Peptidase_S9_N Prolyl oligopeptidase, N-terminal beta-propeller domain. This unusual 7-stranded beta-propeller domain protects the catalytic triad of prolyl oligopeptidase (see pfam00326), excluding larger peptides and proteins from proteolysis in the cytosol.
Probab=99.13 E-value=4.4e-07 Score=64.50 Aligned_cols=250 Identities=13% Similarity=0.142 Sum_probs=106.8
Q ss_pred CCCEEEEEECCCCCCCCEEEEEECCC-CCEEEEEEECCCCCEE-EEEECCCCCEEEEEEECCCC------CCCCCEEEEC
Q ss_conf 44178875136764421001231145-5402688621764023-45576899848998503467------6443037711
Q gi|254780548|r 174 NSRILFVSESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILF-EPRFSPNQQKVAYATYDDED------ILRVYLMDTR 245 (447)
Q Consensus 174 ~triafv~~~~~~~~~~~~l~i~d~D-G~n~~~l~~~~~~~~~-sP~wSpDG~~Iay~s~~~~~------~~~i~~~~~~ 245 (447)
..++||--..+ |...+.|.+.|.. |. .|...-..... +.+|++||+.+.|+.+.... ..+||...+.
T Consensus 137 ~~~la~s~~~~--G~e~~~l~v~Dl~tg~---~l~d~i~~~~~~~i~W~~d~~~f~Y~~~~~~~~~~~~~~~~v~~h~lG 211 (412)
T pfam02897 137 GRLLAYSLSLS--GSDWYTIRFRDVETGE---PLPDVLEGVKFSGIVWAPDNKGFFYSRYDEPQRGSTNLNQKVWRHRLG 211 (412)
T ss_pred CCEEEEEEECC--CCCEEEEEEEECCCCC---CCCCCCCCEECCCEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEECC
T ss_conf 99899997089--9851379999988899---845421340036679968998999996278655446787779999899
Q ss_pred CCCCE-EEEECCCC--C-EEEEEECCCCCEEEEEECCCC-CEEEEEEECCCCC--CCCCCCC-CCCCCCEEEECCCCEEE
Q ss_conf 79717-99743798--5-244455158955677413787-3038998404774--1100257-76432025521674789
Q gi|254780548|r 246 IDRAP-KRIGNFRS--M-ILAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNA--TERLTNT-LFINISASYSPDSSQIV 317 (447)
Q Consensus 246 ~g~~~-~~~~~~~~--~-~~~p~wSPDG~~la~~~s~~g-~~~I~~~d~~~~~--~~~lT~~-~~~d~~p~~spDG~~I~ 317 (447)
+.... .++-..+. . .....-|.||+.|++..+... ..++|++++.... .+.+... .++. -.-...|..++
T Consensus 212 t~~~~d~lv~~e~~~~~~~~~~~~s~d~~yl~i~~~~~~~~~e~~~~~~~~~~~~~~~v~~~~~~~~--~~v~~~~~~~y 289 (412)
T pfam02897 212 TPQSQDVLVFEEPDEPFWYLGAERSDDGKYLFISSASGTDVNELYVLDLTKESLPLRKVVPRFDGVY--YYVEHEGDTFY 289 (412)
T ss_pred CCCCCCEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCCCE--EEEECCCCEEE
T ss_conf 9975678999827898278867866999789999703677638999755787767168664666836--75413698899
Q ss_pred EEECCCC-CCCEEEEEECCCCC---CEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEE-EECCCCC
Q ss_conf 9723776-53315764025674---11122035300004687768889999714991579999889996799-6627875
Q gi|254780548|r 318 FESDREG-KEQLYVMQSNGSDQ---KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNL 392 (447)
Q Consensus 318 f~Sdr~G-~~qiy~~~~~g~~~---~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~-lt~~~~~ 392 (447)
+.+++++ +-.|+.++++.... +.+-........--.++.-+++|+...+.++...|.+++++++.... +......
T Consensus 290 i~tn~~ap~~~L~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~lvl~~~~~~~~~l~i~~~~~~~~~~~~~~p~~~ 369 (412)
T pfam02897 290 FLTNDGAPNFRLVRVDLNDPSPADWKDVIVEHREDVLLEEITVFGNYLVLSYRRDALSRLQVFDLGGGGVLFEEFLPGVG 369 (412)
T ss_pred EEECCCCCCCEEEEEECCCCCCCCCCEEECCCCCCEEEEEEEEECCEEEEEEEECCEEEEEEEECCCCCEEEECCCCCCC
T ss_conf 95067578977999656775500354045057897278889998999999999388728999979999576012787730
Q ss_pred CCCEECC--CCCEEEEEEEECCCCCEEEEEEECCCCCEEEC
Q ss_conf 5437887--89989999950898733799998899714733
Q gi|254780548|r 393 QAPTWSP--SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431 (447)
Q Consensus 393 e~P~wSP--DG~~i~f~~~~~g~~~~~l~~~~~~G~~~~~~ 431 (447)
.....++ +...+-| +-.+-.....+|..|+......++
T Consensus 370 ~~~~~~~~~~~~~~~~-~ysS~~tP~t~y~yD~~tg~~~ll 409 (412)
T pfam02897 370 SVSSASGEYDDDELRY-SFSSFLTPGTIYDLDLATGELELL 409 (412)
T ss_pred CEECCCCCCCCCEEEE-EEECCCCCCEEEEEECCCCCEEEE
T ss_conf 1223679989999999-986999998899999899988999
No 45
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.11 E-value=1.9e-08 Score=73.57 Aligned_cols=245 Identities=16% Similarity=0.208 Sum_probs=125.3
Q ss_pred CCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECC-----C--------------
Q ss_conf 441788751367644210012311455402688621764023455768998489985034-----6--------------
Q gi|254780548|r 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-----E-------------- 234 (447)
Q Consensus 174 ~triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~-----~-------------- 234 (447)
...++|++.. +....++|+++.+| .++..... +..+.|+|+|+++++..... +
T Consensus 71 g~~~~~~~~~---~~~~~~l~l~~~~g----~~~~~~~~-v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (620)
T COG1506 71 GSVLAFVSTD---GGRVAQLYLVDVGG----LITKTAFG-VSDARWSPDGDRIAFLTAEGASKRDGGDHLFVDRLPVWFD 142 (620)
T ss_pred CCEEEEECCC---CCCCEEEEEEECCC----CEEEECCC-CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEC
T ss_conf 9789985478---87531699962377----40342134-3322206668731453132244457753225556418987
Q ss_pred ----CCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCC-C---EEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf ----7644303771179717997437985244455158955677413787-3---0389984047741100257764320
Q gi|254780548|r 235 ----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-A---MDIYSVDLQSNATERLTNTLFINIS 306 (447)
Q Consensus 235 ----~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g-~---~~I~~~d~~~~~~~~lT~~~~~d~~ 306 (447)
....+|+.+..+ ....+...+.....++|.+|++.++.+...+. . .+.++....++.+..++....-+..
T Consensus 143 ~~g~~~~~l~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (620)
T COG1506 143 GRGGERSDLYVVDIES--KLIKLGLGNLDVVSFATDGDGRLVASIRLDDDADPWVTNLYVLIEGNGELESLTPGEGSISK 220 (620)
T ss_pred CCCCCCCCEEEEECCC--CEEECCCCCCCCCEEEECCCCCEEEEEEECCCCCCCEEEEEEECCCCCCEEEECCCCCCEEE
T ss_conf 7887524119980686--11102568887115785698733676431456687545434411578734886578763003
Q ss_pred EEEECCCCEEEEEECCCCC-----CCEEEEEECCCCCCEEEEECC--CCEEEEEECCCCCEEEEEECC-CCCEEEEEEEC
Q ss_conf 2552167478997237765-----331576402567411122035--300004687768889999714-99157999988
Q gi|254780548|r 307 ASYSPDSSQIVFESDREGK-----EQLYVMQSNGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKK 378 (447)
Q Consensus 307 p~~spDG~~I~f~Sdr~G~-----~qiy~~~~~g~~~~rlT~~~~--~~~~~p~wSPdG~~Iaf~~~~-~~~~~i~~~~~ 378 (447)
+.|.+||+.+++.+++... .+++..+.+.+.........+ .....-.+.-+++.++|+... .+...++....
T Consensus 221 ~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~ 300 (620)
T COG1506 221 LAFDADGKSIALLGTESDRGLAEGDFILLLDGELGEVDGDLSSGDDTRGAWAVEGGLDGDGLLFIATDGGGSSPLFRVDD 300 (620)
T ss_pred EEECCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCEECCCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCEEEEEECC
T ss_conf 33268987378973158788423231243120146133135657654454322023278747999944788357886315
Q ss_pred CCCCEEEEECCCCCCCCEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEEC
Q ss_conf 99967996627875543788789989999950898733799998899714733
Q gi|254780548|r 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431 (447)
Q Consensus 379 ~g~~~~~lt~~~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~~~ 431 (447)
.++....+.. .....+.|+.||+.+++..... ....++|..+. +...+++
T Consensus 301 ~~~~~~~~~~-~~~~v~~f~~~~~~~~~~~s~~-~~p~~i~~~~~-~~~~~~~ 350 (620)
T COG1506 301 LGGGVEGLSG-DDGGVPGFDVDGRKLALAYSSP-TEPPEIYLYDR-GEEAKLT 350 (620)
T ss_pred CCCCCEECCC-CCCEEEEEECCCCEEEEEECCC-CCCCEEEEECC-CCCEEEC
T ss_conf 5553010047-8740787831698899996169-99835999757-8620321
No 46
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.09 E-value=9.8e-07 Score=62.15 Aligned_cols=175 Identities=15% Similarity=0.219 Sum_probs=111.8
Q ss_pred EEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEE-C-CCCCEEEE---EECCCCCEEEEEECCCCCEEEEEEECC
Q ss_conf 455768998489985034676443037711797179974-3-79852444---551589556774137873038998404
Q gi|254780548|r 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-N-FRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQ 290 (447)
Q Consensus 216 sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~-~-~~~~~~~p---~wSPDG~~la~~~s~~g~~~I~~~d~~ 290 (447)
+-.+.|||+.++-+. -+.-+|+++++..|.-..... . .+| ..| .|+|+|+-......-++.-+.|.++..
T Consensus 149 ~a~~tP~~~~l~v~D---LG~Dri~~y~~~dg~L~~~~~~~v~~G--~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~ 223 (346)
T COG2706 149 SANFTPDGRYLVVPD---LGTDRIFLYDLDDGKLTPADPAEVKPG--AGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPA 223 (346)
T ss_pred EEEECCCCCEEEEEE---CCCCEEEEEECCCCCCCCCCCCCCCCC--CCCCEEEECCCCCEEEEEECCCCEEEEEEECCC
T ss_conf 510079988999851---698669999865686340331012899--886238985998689998401878999997688
Q ss_pred CCCCCCCCCCCC------CC---CCEEEECCCCEEEEEECCCCCC-CEEEEEECCCCCCEEEE---ECCCCEEEEEECCC
Q ss_conf 774110025776------43---2025521674789972377653-31576402567411122---03530000468776
Q gi|254780548|r 291 SNATERLTNTLF------IN---ISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQ---DKEASYFDPVWSPQ 357 (447)
Q Consensus 291 ~~~~~~lT~~~~------~d---~~p~~spDG~~I~f~Sdr~G~~-qiy~~~~~g~~~~rlT~---~~~~~~~~p~wSPd 357 (447)
+++.++|-.... -+ ..-..||||+. .|+|||+-.. -+|.++.+|+..+-+.. ++.. -.+..++|+
T Consensus 224 ~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrF-LYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~-PR~F~i~~~ 301 (346)
T COG2706 224 VGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRF-LYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQF-PRDFNINPS 301 (346)
T ss_pred CCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCE-EEEECCCCCEEEEEEECCCCCEEEEEEEEECCCCC-CCCCEECCC
T ss_conf 7678874200247544689974257999789888-99955888708999986899989999985057858-753144799
Q ss_pred CCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCCCCCEE
Q ss_conf 8889999714991579999889996799662787554378
Q gi|254780548|r 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397 (447)
Q Consensus 358 G~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~~~~e~P~w 397 (447)
|+.++-.++.+....+|..|..+|...++......-.|.|
T Consensus 302 g~~Liaa~q~sd~i~vf~~d~~TG~L~~~~~~~~~p~Pvc 341 (346)
T COG2706 302 GRFLIAANQKSDNITVFERDKETGRLTLLGRYAVVPEPVC 341 (346)
T ss_pred CCEEEEECCCCCCEEEEEECCCCCEEEECCCCCCCCCCEE
T ss_conf 9899997257984899998588762775231117799679
No 47
>KOG0293 consensus
Probab=99.09 E-value=7.7e-09 Score=76.23 Aligned_cols=179 Identities=15% Similarity=0.169 Sum_probs=90.8
Q ss_pred CEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCC--CEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECC
Q ss_conf 023455768998489985034676443037711797--179974379852444551589556774137873038998404
Q gi|254780548|r 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR--APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290 (447)
Q Consensus 213 ~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~--~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~ 290 (447)
-+.--.|||+|+.+|=.| .....-||...-. +. -...+..+......-.||||.+.|+-. ..+. .+++-|++
T Consensus 226 EVWfl~FS~nGkyLAsaS--kD~Taiiw~v~~d-~~~kl~~tlvgh~~~V~yi~wSPDdryLlaC-g~~e--~~~lwDv~ 299 (519)
T KOG0293 226 EVWFLQFSHNGKYLASAS--KDSTAIIWIVVYD-VHFKLKKTLVGHSQPVSYIMWSPDDRYLLAC-GFDE--VLSLWDVD 299 (519)
T ss_pred CEEEEEECCCCEEEEECC--CCCEEEEEEEECC-CCEEEEEEEECCCCCEEEEEECCCCCEEEEC-CCHH--HEEECCCC
T ss_conf 379999768970674336--7741799999437-6125655440245735899987987727735-8157--23524577
Q ss_pred CCCCCCCCCCC-CC-CCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECC--CCEEEEEECCCCCEEEEEEC
Q ss_conf 77411002577-64-3202552167478997237765331576402567411122035--30000468776888999971
Q gi|254780548|r 291 SNATERLTNTL-FI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKF 366 (447)
Q Consensus 291 ~~~~~~lT~~~-~~-d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~--~~~~~p~wSPdG~~Iaf~~~ 366 (447)
+|..+.+-.+. +. ..+-.|-|||.+++--|-+ .+|+..+++|..... +.+. -...+.+.++||++++-+..
T Consensus 300 tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~d---r~i~~wdlDgn~~~~--W~gvr~~~v~dlait~Dgk~vl~v~~ 374 (519)
T KOG0293 300 TGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPD---RTIIMWDLDGNILGN--WEGVRDPKVHDLAITYDGKYVLLVTV 374 (519)
T ss_pred CCHHHHHCCCCCCCCCCEEEECCCCCEEEECCCC---CCEEEECCCCCHHHC--CCCCCCCEEEEEEECCCCCEEEEEEC
T ss_conf 5403112356767874236873687436844898---747996478424313--35433552688897479958999961
Q ss_pred CCCCEEEEEEECCCCCEE-EEECCCCCCCCEECCCCCEEE
Q ss_conf 499157999988999679-966278755437887899899
Q gi|254780548|r 367 SGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLI 405 (447)
Q Consensus 367 ~~~~~~i~~~~~~g~~~~-~lt~~~~~e~P~wSPDG~~i~ 405 (447)
+ ..|.+++......+ .+++.....+-+.|.||+.++
T Consensus 375 d---~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~L 411 (519)
T KOG0293 375 D---KKIRLYNREARVDRGLISEEQPITSFSISKDGKLAL 411 (519)
T ss_pred C---CCEEEECHHHHHHHCCCCCCCCEEEEEECCCCCEEE
T ss_conf 6---525431345643430012358636899748970899
No 48
>KOG0973 consensus
Probab=99.09 E-value=1e-07 Score=68.71 Aligned_cols=157 Identities=19% Similarity=0.281 Sum_probs=79.7
Q ss_pred EEEEEECCCCCEEEEEEECCCCCCCCCEEEE------C--CCC--------CEEEEECCCCCEEEEEECCCCCEEEEEEC
Q ss_conf 2345576899848998503467644303771------1--797--------17997437985244455158955677413
Q gi|254780548|r 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDT------R--IDR--------APKRIGNFRSMILAPRFSSNGKRALISVQ 277 (447)
Q Consensus 214 ~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~------~--~g~--------~~~~~~~~~~~~~~p~wSPDG~~la~~~s 277 (447)
+.--+|||||+.+|.-| +.+...||-+.. - +|+ ....+..+++-.....||||+..++ +.+
T Consensus 72 v~CVR~S~dG~~lAsGS--DD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lv-S~s 148 (942)
T KOG0973 72 VNCVRFSPDGSYLASGS--DDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLV-SVS 148 (942)
T ss_pred EEEEEECCCCCEEEECC--CCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEECCCCCCCEEE-EEC
T ss_conf 55899878987686526--860588863046677655056666544101258999824877611000278860899-850
Q ss_pred CCCCEEEEEEECCCC-CCCCCCCCCCCCCCEEEECCCCEEEEEEC-CCCCCCEEEEEECCCCCCEEEEECC-----CCEE
Q ss_conf 787303899840477-41100257764320255216747899723-7765331576402567411122035-----3000
Q gi|254780548|r 278 KDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESD-REGKEQLYVMQSNGSDQKRISQDKE-----ASYF 350 (447)
Q Consensus 278 ~~g~~~I~~~d~~~~-~~~~lT~~~~~d~~p~~spDG~~I~f~Sd-r~G~~qiy~~~~~g~~~~rlT~~~~-----~~~~ 350 (447)
.|+..-|| |..+- ..+++-.|.+-.-..+|-|-|++++-.|| |. --||..+ +-+-+++||-... -...
T Consensus 149 ~DnsViiw--n~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrt--ikvwrt~-dw~i~k~It~pf~~~~~~T~f~ 223 (942)
T KOG0973 149 LDNSVIIW--NAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRT--LKVWRTS-DWGIEKSITKPFEESPLTTFFL 223 (942)
T ss_pred CCCEEEEE--CCCCCEEEEEEECCCCCCCCEEECCCCCEEEEECCCCE--EEEEECC-CCEEEEEECCCHHHCCCCCEEE
T ss_conf 35329998--36200002444013354365488885573556238834--9999815-6404674046232187742354
Q ss_pred EEEECCCCCEEEEEEC-CCCCEEEEEEEC
Q ss_conf 0468776888999971-499157999988
Q gi|254780548|r 351 DPVWSPQGDLIAFTKF-SGEKFAIGVMKK 378 (447)
Q Consensus 351 ~p~wSPdG~~Iaf~~~-~~~~~~i~~~~~ 378 (447)
-+.|||||++|+-.+- +++..-+.+++.
T Consensus 224 RlSWSPDG~~las~nA~n~~~~~~~IieR 252 (942)
T KOG0973 224 RLSWSPDGHHLASPNAVNGGKSTIAIIER 252 (942)
T ss_pred ECCCCCCCCEECCHHHCCCCCCEEEEEEC
T ss_conf 34648986741143330688662678833
No 49
>pfam08662 eIF2A Eukaryotic translation initiation factor eIF2A. This is a family of eukaryotic translation initiation factors.
Probab=99.09 E-value=4.3e-08 Score=71.24 Aligned_cols=157 Identities=18% Similarity=0.271 Sum_probs=81.9
Q ss_pred EECCCCCEEEEEEC---------CCCCEEEEEEECCCCCCCCCC-CCCCCCCCEEEECCCCEEEEEECCCCCC-CEEEEE
Q ss_conf 55158955677413---------787303899840477411002-5776432025521674789972377653-315764
Q gi|254780548|r 264 RFSSNGKRALISVQ---------KDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKE-QLYVMQ 332 (447)
Q Consensus 264 ~wSPDG~~la~~~s---------~~g~~~I~~~d~~~~~~~~lT-~~~~~d~~p~~spDG~~I~f~Sdr~G~~-qiy~~~ 332 (447)
.|+|.|+.|++..+ .-|+.+||.++..+.....|. ...+.-..-+|+|.|++.+-.... .| .+-..+
T Consensus 12 ~W~~~G~~llv~~~t~~dkt~ksyyg~~~l~~l~~~~~~~~~v~l~~~gpv~d~~W~P~g~~F~vi~G~--~p~~~~ly~ 89 (194)
T pfam08662 12 KWNKNGTYLLVLVSTDVDKTNKSYYGEFNLYLIGETGGPDEVVELDKEGPIHDFAWSPNGKEFAVIYGY--MPAKITFFD 89 (194)
T ss_pred EECCCCCEEEEEEEEEECCCCCEEECCEEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECC--CCCEEEEEC
T ss_conf 977868999999986354789738143589999379980579981688847999987699889999837--997479994
Q ss_pred ECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECC--CCCCCCEECCCCCEEEEEEEE
Q ss_conf 025674111220353000046877688899997149915799998899967996627--875543788789989999950
Q gi|254780548|r 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKK 410 (447)
Q Consensus 333 ~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~--~~~e~P~wSPDG~~i~f~~~~ 410 (447)
..+... .+++. .....-.|||.|+.|+.....+-.-+|..+|.+.. +++... ...-.-.||||||+++.++..
T Consensus 90 ~~~~~i--~~f~~-~~~N~i~wsP~G~~~~lagfgnl~G~l~f~d~~~~--k~i~~~~~~~~t~~~WsPdGr~~~tatt~ 164 (194)
T pfam08662 90 LKGNVI--HSLGE-QPRNTIFWSPFGRLVLLAGFGNLAGQIEFWDVKNK--KKIATAEASNATDCEWSPDGRYFLTATTS 164 (194)
T ss_pred CCCEEE--EEECC-CCCCEEEECCCCCEEEEEECCCCCCEEEEEECCCC--EEEEECCCCCEEEEEECCCCCEEEEEEEC
T ss_conf 761699--98689-87325999999999999877899823999999996--89867154977789998999999999914
Q ss_pred C---CCCCEEEEEEECCCCCEE
Q ss_conf 8---987337999988997147
Q gi|254780548|r 411 D---GDTGSKLYSIDLNGRNET 429 (447)
Q Consensus 411 ~---g~~~~~l~~~~~~G~~~~ 429 (447)
. -+++..||.. .|+...
T Consensus 165 pR~~vDNg~kIw~~--~G~ll~ 184 (194)
T pfam08662 165 PRLRVDNGFKIWHY--SGKLVY 184 (194)
T ss_pred CCEEECCCEEEEEE--CCCEEE
T ss_conf 76686088899975--690910
No 50
>KOG0291 consensus
Probab=99.08 E-value=3.7e-07 Score=64.94 Aligned_cols=35 Identities=20% Similarity=0.215 Sum_probs=12.9
Q ss_pred EEEEEECCCCCCCCCC-CCCCCCCCEEEECCCCEEE
Q ss_conf 3899840477411002-5776432025521674789
Q gi|254780548|r 283 DIYSVDLQSNATERLT-NTLFINISASYSPDSSQIV 317 (447)
Q Consensus 283 ~I~~~d~~~~~~~~lT-~~~~~d~~p~~spDG~~I~ 317 (447)
+||+.++++|++.-+. .|.+.-..-+|+|+|+.|+
T Consensus 459 ~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~La 494 (893)
T KOG0291 459 EIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLA 494 (893)
T ss_pred EEEEEEEECCEEEEHHCCCCCCCEEEEECCCCCEEE
T ss_conf 899998005714301327777610257756668677
No 51
>KOG0291 consensus
Probab=99.07 E-value=8.9e-07 Score=62.44 Aligned_cols=81 Identities=16% Similarity=0.262 Sum_probs=39.0
Q ss_pred CCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCC
Q ss_conf 76443037711797179974379852444551589556774137873038998404774110025776432025521674
Q gi|254780548|r 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314 (447)
Q Consensus 235 ~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~ 314 (447)
+..+||++++.||+....+..+.|..+.-+|+|+|..| ++.+.|..-.||-+=-..+++..|- ....-+.-+|+|||+
T Consensus 456 d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~L-aS~SWDkTVRiW~if~s~~~vEtl~-i~sdvl~vsfrPdG~ 533 (893)
T KOG0291 456 DSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLL-ASGSWDKTVRIWDIFSSSGTVETLE-IRSDVLAVSFRPDGK 533 (893)
T ss_pred CEEEEEEEEEECCEEEEHHCCCCCCCEEEEECCCCCEE-EECCCCCEEEEEEEECCCCEEEEEE-ECCCEEEEEECCCCC
T ss_conf 61789999800571430132777761025775666867-7513554278888632676035676-022113788747997
Q ss_pred EEE
Q ss_conf 789
Q gi|254780548|r 315 QIV 317 (447)
Q Consensus 315 ~I~ 317 (447)
.|+
T Consensus 534 ela 536 (893)
T KOG0291 534 ELA 536 (893)
T ss_pred EEE
T ss_conf 688
No 52
>KOG0318 consensus
Probab=99.05 E-value=2.5e-07 Score=66.17 Aligned_cols=131 Identities=19% Similarity=0.346 Sum_probs=59.5
Q ss_pred HHHHHCCCCEEEEEEEEECCCCEEEEEEEEECCCCCC-EECCCCCCCCHHHH---H--HHHHHHHHHH-HHHHCCCCCCC
Q ss_conf 8874156218999997404662257899984155542-00002323377788---9--9999998999-99750445555
Q gi|254780548|r 101 QDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSPASW---R--KIAHTISDDI-YQSITGEKGDF 173 (447)
Q Consensus 101 ~~W~~~gad~lv~G~i~~~~~~~~~v~~~L~dv~~~~-~i~~~~~~~~~~~~---R--~~ah~~ad~i-~~~ltG~~G~f 173 (447)
-+|..=+-..++.|. |.+++ ..+.+||..+-- .+.|.+-..+.-++ | |++ .-+|+- +.-.-|.+=-|
T Consensus 109 i~Wd~ds~RI~avGE----Grerf-g~~F~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~-T~sdDn~v~ffeGPPFKF 182 (603)
T KOG0318 109 ISWDFDSKRIAAVGE----GRERF-GHVFLWDSGNSVGEITGHSRRINSVDFKPSRPFRIA-TGSDDNTVAFFEGPPFKF 182 (603)
T ss_pred CEECCCCCEEEEEEC----CCCCE-EEEEEECCCCCCCEECCCCEEEEEEECCCCCCEEEE-ECCCCCEEEEEECCCEEE
T ss_conf 200788868999815----73004-489996279843302055316763332678853778-526787699861898245
Q ss_pred ------CCCEEEEEECCCCCCCC------EEEEEECCCCCEEEEE---E---ECCCCCEEEEEECCCCCEEEEEEECCCC
Q ss_conf ------44178875136764421------0012311455402688---6---2176402345576899848998503467
Q gi|254780548|r 174 ------NSRILFVSESVVSGIIK------NSLCVMDRDGANIRYL---T---PSRDQILFEPRFSPNQQKVAYATYDDED 235 (447)
Q Consensus 174 ------~triafv~~~~~~~~~~------~~l~i~d~DG~n~~~l---~---~~~~~~~~sP~wSpDG~~Iay~s~~~~~ 235 (447)
.+|.++-.+-...+++. .++++ |||..-.++ - .+.++ +++-+||||+++++-+|. ++
T Consensus 183 k~s~r~HskFV~~VRysPDG~~Fat~gsDgki~i--yDGktge~vg~l~~~~aHkGs-IfalsWsPDs~~~~T~Sa--Dk 257 (603)
T KOG0318 183 KSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYI--YDGKTGEKVGELEDSDAHKGS-IFALSWSPDSTQFLTVSA--DK 257 (603)
T ss_pred EECCCCCCCCEEEEEECCCCCEEEEECCCCCEEE--ECCCCCCEEEEECCCCCCCCC-EEEEEECCCCCEEEEECC--CC
T ss_conf 5043210102324898899875998527961999--758876689881578775552-799998898756898528--85
Q ss_pred CCCCCEE
Q ss_conf 6443037
Q gi|254780548|r 236 ILRVYLM 242 (447)
Q Consensus 236 ~~~i~~~ 242 (447)
..+||-.
T Consensus 258 t~KIWdV 264 (603)
T KOG0318 258 TIKIWDV 264 (603)
T ss_pred EEEEEEE
T ss_conf 1898871
No 53
>KOG0263 consensus
Probab=99.02 E-value=1.2e-07 Score=68.36 Aligned_cols=209 Identities=16% Similarity=0.277 Sum_probs=128.4
Q ss_pred EEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCE---EEEEECCCCC
Q ss_conf 2311455402688621764023455768998489985034676443037711797179974379852---4445515895
Q gi|254780548|r 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI---LAPRFSSNGK 270 (447)
Q Consensus 194 ~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~---~~p~wSPDG~ 270 (447)
-+.|-+.......+.++...+++-+||||-+-+. .+ ......++|..+..+ . +..++|.+ ....|+|-|-
T Consensus 434 ~~~D~~~~~~~~~L~GH~GPVyg~sFsPd~rfLl-Sc-SED~svRLWsl~t~s--~---~V~y~GH~~PVwdV~F~P~Gy 506 (707)
T KOG0263 434 DMLDDDSSGTSRTLYGHSGPVYGCSFSPDRRFLL-SC-SEDSSVRLWSLDTWS--C---LVIYKGHLAPVWDVQFAPRGY 506 (707)
T ss_pred HHCCCCCCCEEEEEECCCCCEEEEEECCCCCEEE-EE-CCCCCEEEEECCCCE--E---EEEECCCCCCEEEEEECCCCE
T ss_conf 3026567760687534788644355467545247-50-577625723235532--6---899537876424688778834
Q ss_pred EEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCC-EEEECCCCEEEEE-ECCCCCCCEEEEEECCCCCCEEEEECCCC
Q ss_conf 567741378730389984047741100257764320-2552167478997-23776533157640256741112203530
Q gi|254780548|r 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEAS 348 (447)
Q Consensus 271 ~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~-p~~spDG~~I~f~-Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~ 348 (447)
..| +.+.|+...+|..|- ....|+-.+.-.|+. -.|.|+..+++-- |||. +-..|+..|...||-.+....
T Consensus 507 YFa-tas~D~tArLWs~d~--~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~t----VRlWDv~~G~~VRiF~GH~~~ 579 (707)
T KOG0263 507 YFA-TASHDQTARLWSTDH--NKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRT----VRLWDVSTGNSVRIFTGHKGP 579 (707)
T ss_pred EEE-ECCCCCEEEEEECCC--CCCHHHHCCCCCCCCEEEECCCCCCCCCCCCCCE----EEEEECCCCCEEEEECCCCCC
T ss_conf 788-437884155442256--7725430144467662887796351025788732----898873778579976278886
Q ss_pred EEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCE-EEE-ECCCCCCCCEECCCCCEEEEEEEECCCCCEEEEEEE
Q ss_conf 00046877688899997149915799998899967-996-627875543788789989999950898733799998
Q gi|254780548|r 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422 (447)
Q Consensus 349 ~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~-~~l-t~~~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~ 422 (447)
....++||+|.++|- ...++ .|-++|+.++.. .++ .+.+...+-+||+||..++-. +++..-.+|-+.
T Consensus 580 V~al~~Sp~Gr~LaS-g~ed~--~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasg---g~DnsV~lWD~~ 649 (707)
T KOG0263 580 VTALAFSPCGRYLAS-GDEDG--LIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASG---GADNSVRLWDLT 649 (707)
T ss_pred EEEEEECCCCCEEEE-CCCCC--CEEEEECCCCCHHHHHHCCCCCEEEEEEECCCCEEEEC---CCCCEEEEEEEE
T ss_conf 689997578756741-46578--48999768973157765046734589995368879973---799758999710
No 54
>pfam02897 Peptidase_S9_N Prolyl oligopeptidase, N-terminal beta-propeller domain. This unusual 7-stranded beta-propeller domain protects the catalytic triad of prolyl oligopeptidase (see pfam00326), excluding larger peptides and proteins from proteolysis in the cytosol.
Probab=98.99 E-value=3.2e-06 Score=58.71 Aligned_cols=214 Identities=17% Similarity=0.255 Sum_probs=120.7
Q ss_pred EEECCCCCEEEEEE-ECCCCCCCCCEEEECCCCCEEEEECCCCCEE-EEEECCCCCEEEEEECCCC-------CEEEEEE
Q ss_conf 55768998489985-0346764430377117971799743798524-4455158955677413787-------3038998
Q gi|254780548|r 217 PRFSPNQQKVAYAT-YDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-APRFSSNGKRALISVQKDE-------AMDIYSV 287 (447)
Q Consensus 217 P~wSpDG~~Iay~s-~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~-~p~wSPDG~~la~~~s~~g-------~~~I~~~ 287 (447)
-+.||||+++||.- ..+.....+++.|+.+|+..... .++..+ ..+|++||+.++|+.-..+ ...||..
T Consensus 131 ~~~Spd~~~la~s~~~~G~e~~~l~v~Dl~tg~~l~d~--i~~~~~~~i~W~~d~~~f~Y~~~~~~~~~~~~~~~~v~~h 208 (412)
T pfam02897 131 YAFSPDGRLLAYSLSLSGSDWYTIRFRDVETGEPLPDV--LEGVKFSGIVWAPDNKGFFYSRYDEPQRGSTNLNQKVWRH 208 (412)
T ss_pred EEECCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCC--CCCEECCCEEEECCCCEEEEEECCCCCCCCCCCCCEEEEE
T ss_conf 88899999899997089985137999998889984542--1340036679968998999996278655446787779999
Q ss_pred ECCCCCCCC-CC----CCCCCCCCEEEECCCCEEEEEECCCCC-CCEEEEEECCCC--CCEEEEECCCCEEEEEECCCCC
Q ss_conf 404774110-02----577643202552167478997237765-331576402567--4111220353000046877688
Q gi|254780548|r 288 DLQSNATER-LT----NTLFINISASYSPDSSQIVFESDREGK-EQLYVMQSNGSD--QKRISQDKEASYFDPVWSPQGD 359 (447)
Q Consensus 288 d~~~~~~~~-lT----~~~~~d~~p~~spDG~~I~f~Sdr~G~-~qiy~~~~~g~~--~~rlT~~~~~~~~~p~wSPdG~ 359 (447)
.+.+....- +- +....-.+..-+.||+.++..+..+-. ..+|.+++..+. .+.+.....+... .....|+
T Consensus 209 ~lGt~~~~d~lv~~e~~~~~~~~~~~~s~d~~yl~i~~~~~~~~~e~~~~~~~~~~~~~~~v~~~~~~~~~--~v~~~~~ 286 (412)
T pfam02897 209 RLGTPQSQDVLVFEEPDEPFWYLGAERSDDGKYLFISSASGTDVNELYVLDLTKESLPLRKVVPRFDGVYY--YVEHEGD 286 (412)
T ss_pred ECCCCCCCCEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCCCEE--EEECCCC
T ss_conf 89999756789998278982788678669997899997036776389997557877671686646668367--5413698
Q ss_pred EE-EEEECCCCCEEEEEEECCCCC----EEEEECCCCCCC-CEECCCCCEEEEEEEECCCCCEEEEEEECCCC-CEEECC
Q ss_conf 89-999714991579999889996----799662787554-37887899899999508987337999988997-147336
Q gi|254780548|r 360 LI-AFTKFSGEKFAIGVMKKDGSQ----ERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLIN 432 (447)
Q Consensus 360 ~I-af~~~~~~~~~i~~~~~~g~~----~~~lt~~~~~e~-P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~-~~~~~~ 432 (447)
.+ +.+.....++.|+.+++.... ...+-....+.. -.++.-+.+|+-...+++. .+|+++++++. ....+.
T Consensus 287 ~~yi~tn~~ap~~~L~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~lvl~~~~~~~--~~l~i~~~~~~~~~~~~~ 364 (412)
T pfam02897 287 TFYFLTNDGAPNFRLVRVDLNDPSPADWKDVIVEHREDVLLEEITVFGNYLVLSYRRDAL--SRLQVFDLGGGGVLFEEF 364 (412)
T ss_pred EEEEEECCCCCCCEEEEEECCCCCCCCCCEEECCCCCCEEEEEEEEECCEEEEEEEECCE--EEEEEEECCCCCEEEECC
T ss_conf 899950675789779996567755003540450578972788899989999999993887--289999799995760127
Q ss_pred CCCC
Q ss_conf 7887
Q gi|254780548|r 433 TPAY 436 (447)
Q Consensus 433 ~~g~ 436 (447)
.++.
T Consensus 365 ~p~~ 368 (412)
T pfam02897 365 LPGV 368 (412)
T ss_pred CCCC
T ss_conf 8773
No 55
>KOG0279 consensus
Probab=98.98 E-value=7.2e-07 Score=63.03 Aligned_cols=214 Identities=15% Similarity=0.190 Sum_probs=128.9
Q ss_pred EEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECC-CCCEEEEEECCCC
Q ss_conf 001231145540268862176402345576899848998503467644303771179717997437-9852444551589
Q gi|254780548|r 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF-RSMILAPRFSSNG 269 (447)
Q Consensus 191 ~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~-~~~~~~p~wSPDG 269 (447)
+.|.+-|..+...++...++...+++-++|||.++|.=-| ..+ .|.++++.++...+..... .+-.....|||.-
T Consensus 85 ~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGS--rDk--Tiklwntlg~ck~t~~~~~~~~WVscvrfsP~~ 160 (315)
T KOG0279 85 GTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGS--RDK--TIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNE 160 (315)
T ss_pred CEEEEEEECCCCEEEEEEECCCCEEEEEECCCCCEEECCC--CCC--EEEEEEECCCEEEEECCCCCCCCEEEEEECCCC
T ss_conf 5488878057917899980577568998548874133378--763--035646103279998047776608999985899
Q ss_pred -CEEEEEECCCCCEEEEEEECCCCCCCC-CCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCC
Q ss_conf -556774137873038998404774110-025776432025521674789972377653315764025674111220353
Q gi|254780548|r 270 -KRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347 (447)
Q Consensus 270 -~~la~~~s~~g~~~I~~~d~~~~~~~~-lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~ 347 (447)
.-++.+.+.|+.-.+| |+++-+++. ...+.++-+.-++||||...+. -.++| +++..|++.++- .-+.++..
T Consensus 161 ~~p~Ivs~s~DktvKvW--nl~~~~l~~~~~gh~~~v~t~~vSpDGslcas-Ggkdg--~~~LwdL~~~k~-lysl~a~~ 234 (315)
T KOG0279 161 SNPIIVSASWDKTVKVW--NLRNCQLRTTFIGHSGYVNTVTVSPDGSLCAS-GGKDG--EAMLWDLNEGKN-LYSLEAFD 234 (315)
T ss_pred CCCEEEECCCCCEEEEE--CCCCCCHHHCCCCCCCCEEEEEECCCCCEEEC-CCCCC--EEEEEECCCCCE-EEECCCCC
T ss_conf 97479973477438997--26775412104465551778998889877740-79884--699998267860-58516777
Q ss_pred CEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCE-EEEEC----------CCCCCCCEECCCCCEEEEEEEECCCCCE
Q ss_conf 000046877688899997149915799998899967-99662----------7875543788789989999950898733
Q gi|254780548|r 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVE----------DSNLQAPTWSPSGRSLIFSRKKDGDTGS 416 (447)
Q Consensus 348 ~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~-~~lt~----------~~~~e~P~wSPDG~~i~f~~~~~g~~~~ 416 (447)
...+-.+||+--+|+-. .+.. |-+.+++++.. --|.- +..+-+-.||+||+++ |.-..++ ..
T Consensus 235 ~v~sl~fspnrywL~~a--t~~s--IkIwdl~~~~~v~~l~~d~~g~s~k~~~~~clslaws~dG~tL-f~g~td~--~i 307 (315)
T KOG0279 235 IVNSLCFSPNRYWLCAA--TATS--IKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTL-FAGYTDN--VI 307 (315)
T ss_pred EEEEEEECCCCEEEEEC--CCCC--EEEEECCCHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEE-EEECCCC--CE
T ss_conf 37668855982057651--5771--5999636512012003022245434688479998972899579-8560689--68
Q ss_pred EEEEE
Q ss_conf 79999
Q gi|254780548|r 417 KLYSI 421 (447)
Q Consensus 417 ~l~~~ 421 (447)
.+|.+
T Consensus 308 rv~qv 312 (315)
T KOG0279 308 RVWQV 312 (315)
T ss_pred EEEEE
T ss_conf 99986
No 56
>KOG2139 consensus
Probab=98.98 E-value=3.5e-07 Score=65.16 Aligned_cols=157 Identities=14% Similarity=0.200 Sum_probs=97.2
Q ss_pred EEEEEEECCCC-CEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCC
Q ss_conf 02688621764-02345576899848998503467644303771179717997437985244455158955677413787
Q gi|254780548|r 202 NIRYLTPSRDQ-ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280 (447)
Q Consensus 202 n~~~l~~~~~~-~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g 280 (447)
.+-++.++.+. .+-+-+|.+||..++=.||.. ..|.+.|..+|....+.-...|..+--.|||||.++ |+.+.|+
T Consensus 185 ~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gs---ssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~l-faAt~da 260 (445)
T KOG2139 185 HHLQVLQDPGHNPVTSMQWNEDGTILVTASFGS---SSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVL-FAATCDA 260 (445)
T ss_pred CCHHHEECCCCCEEEEEEECCCCCEEEECCCCC---CEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEE-EEECCCC
T ss_conf 445530479986113778757788786236686---128997578787512334588861257886999889-9961561
Q ss_pred CEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCC--------CCEEEE---------
Q ss_conf 303899840477411002577643202552167478997237765331576402567--------411122---------
Q gi|254780548|r 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD--------QKRISQ--------- 343 (447)
Q Consensus 281 ~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~--------~~rlT~--------- 343 (447)
.-.+|.-+-.-..++.++... .-..+.|+|+|+.|.|+. .|.|-||....++.. .++++.
T Consensus 261 vfrlw~e~q~wt~erw~lgsg-rvqtacWspcGsfLLf~~--sgsp~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti 337 (445)
T KOG2139 261 VFRLWQENQSWTKERWILGSG-RVQTACWSPCGSFLLFAC--SGSPRLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTI 337 (445)
T ss_pred EEEEEHHCCCCEECCEECCCC-CEEEEEECCCCCEEEEEE--CCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCHHHHH
T ss_conf 265101236400032003687-250016668788799997--38854899860688854457566303555404156543
Q ss_pred -EC----CCCEEEEEECCCCCEEEEEE
Q ss_conf -03----53000046877688899997
Q gi|254780548|r 344 -DK----EASYFDPVWSPQGDLIAFTK 365 (447)
Q Consensus 344 -~~----~~~~~~p~wSPdG~~Iaf~~ 365 (447)
.+ -+.....+|-|-|.++|.+-
T Consensus 338 ~ag~~l~cgeaq~lawDpsGeyLav~f 364 (445)
T KOG2139 338 CAGQRLCCGEAQCLAWDPSGEYLAVIF 364 (445)
T ss_pred HCCCCCCCCCCCEEEECCCCCEEEEEE
T ss_conf 237440067620445778788799997
No 57
>KOG2139 consensus
Probab=98.97 E-value=4.5e-08 Score=71.10 Aligned_cols=197 Identities=13% Similarity=0.121 Sum_probs=103.7
Q ss_pred EEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECC--C-------CCEEEEECCCCCE--EEEEECCCCC
Q ss_conf 026886217640234557689984899850346764430377117--9-------7179974379852--4445515895
Q gi|254780548|r 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI--D-------RAPKRIGNFRSMI--LAPRFSSNGK 270 (447)
Q Consensus 202 n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~--g-------~~~~~~~~~~~~~--~~p~wSPDG~ 270 (447)
-+..|+...-..+-.-+|-|.+.+..-+.-+. ..=||-.+-.. + .....+...+|.+ -+-.|.+||.
T Consensus 131 ~pt~Lks~sQrnvtclawRPlsaselavgCr~--gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt 208 (445)
T KOG2139 131 CPTKLKSVSQRNVTCLAWRPLSASELAVGCRA--GICIWSDSRTLNANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGT 208 (445)
T ss_pred CCCEECCHHHCCEEEEEECCCCCCEEEEEECC--EEEEEECCCCCCCCCCCCCCCCCCHHHEECCCCCEEEEEEECCCCC
T ss_conf 77110362016505788526776546353025--0599974764333564334565445530479986113778757788
Q ss_pred EEEEEECCCCCEEEEEEECCCCCCCCCC-CCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCE
Q ss_conf 5677413787303899840477411002-577643202552167478997237765331576402567411122035300
Q gi|254780548|r 271 RALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349 (447)
Q Consensus 271 ~la~~~s~~g~~~I~~~d~~~~~~~~lT-~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~ 349 (447)
.++-++ -|...|-+-|.+++...+|- .+.+--+--.|||||.++.-++ -.+...+|--+..=...+.++..| ..
T Consensus 209 ~l~tAS--~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt-~davfrlw~e~q~wt~erw~lgsg--rv 283 (445)
T KOG2139 209 ILVTAS--FGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAAT-CDAVFRLWQENQSWTKERWILGSG--RV 283 (445)
T ss_pred EEEECC--CCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEC-CCCEEEEEHHCCCCEECCEECCCC--CE
T ss_conf 786236--6861289975787875123345888612578869998899961-561265101236400032003687--25
Q ss_pred EEEEECCCCCEEEEEECCCCCEEEEEEECCCC--------------------CEEEEEC----CCCCCCCEECCCCCEEE
Q ss_conf 00468776888999971499157999988999--------------------6799662----78755437887899899
Q gi|254780548|r 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--------------------QERLLVE----DSNLQAPTWSPSGRSLI 405 (447)
Q Consensus 350 ~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~--------------------~~~~lt~----~~~~e~P~wSPDG~~i~ 405 (447)
-+..|||+|..|.|+..... .||.+..++. +....|. ++..+.-.|-|-|.+++
T Consensus 284 qtacWspcGsfLLf~~sgsp--~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLa 361 (445)
T KOG2139 284 QTACWSPCGSFLLFACSGSP--RLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLA 361 (445)
T ss_pred EEEEECCCCCEEEEEECCCC--EEEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCCCCCEEEECCCCCEEE
T ss_conf 00166687887999973885--4899860688854457566303555404156543237440067620445778788799
Q ss_pred EE
Q ss_conf 99
Q gi|254780548|r 406 FS 407 (447)
Q Consensus 406 f~ 407 (447)
-.
T Consensus 362 v~ 363 (445)
T KOG2139 362 VI 363 (445)
T ss_pred EE
T ss_conf 99
No 58
>pfam08450 SGL SMP-30/Gluconolaconase/LRE-like region. This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30), gluconolactonase and luciferin-regenerating enzyme (LRE). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 and LRE.
Probab=98.96 E-value=2.2e-06 Score=59.79 Aligned_cols=200 Identities=17% Similarity=0.274 Sum_probs=106.5
Q ss_pred EEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCC
Q ss_conf 45576899848998503467644303771179717997437985244455158955677413787303899840477411
Q gi|254780548|r 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295 (447)
Q Consensus 216 sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~ 295 (447)
.|.|.+.++.+.|+-..+ .+||.++..++. ..+...++....-.+.+||+-++. ..+ .+++++.+++..+
T Consensus 4 GP~w~~~~g~l~f~Di~~---~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~li~~--~~~---~i~~~~~~~~~~~ 73 (246)
T pfam08450 4 GPVWDEEEGALYWVDILG---KRIHRLDPATGK--ETVFDLPGPVGAIALRDDGRLIVA--LKR---GLALLDLDTGELT 73 (246)
T ss_pred CCEEECCCCEEEEEECCC---CEEEEEECCCCE--EEEEECCCCEEEEEECCCCCEEEE--ECC---CEEEEECCCCCEE
T ss_conf 754989999999998999---999999899996--999989997179998789919999--189---7799977999689
Q ss_pred CCCCCCCC---C---CCEEEECCCCEEEEEE-CCC---C--CCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEE
Q ss_conf 00257764---3---2025521674789972-377---6--533157640256741112203530000468776888999
Q gi|254780548|r 296 RLTNTLFI---N---ISASYSPDSSQIVFES-DRE---G--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363 (447)
Q Consensus 296 ~lT~~~~~---d---~~p~~spDG~~I~f~S-dr~---G--~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf 363 (447)
.|.....- . -...+.|||. |+|+. +.. + ...||.++.+| +++++..+. ..-...+|||||+.+.+
T Consensus 74 ~l~~~~~~~~~~~~~ND~~vd~~G~-l~ftd~~~~~~~~~~~g~vy~~~~~g-~~~~~~~~~-~~pNGi~~s~d~~~lyv 150 (246)
T pfam08450 74 TLADLEPDEWPLNRFNDGKVDPDGR-FWFGTMGFDIAPGGEPGALYRLDPDG-KVERVLDGV-TISNGLAWSPDGKTLYF 150 (246)
T ss_pred EEEECCCCCCCCCCCCCEEECCCCC-EEEECCCCCCCCCCCCCEEEEEECCC-CEEEECCCC-CCCCCEEECCCCCEEEE
T ss_conf 9983468987658985789978999-99734455666788877899994999-999845544-55574389789998999
Q ss_pred EECCCCCEEEEEEEC--CCCC---EEEEECCCC-C---CCCEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEECCCC
Q ss_conf 971499157999988--9996---799662787-5---543788789989999950898733799998899714733678
Q gi|254780548|r 364 TKFSGEKFAIGVMKK--DGSQ---ERLLVEDSN-L---QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434 (447)
Q Consensus 364 ~~~~~~~~~i~~~~~--~g~~---~~~lt~~~~-~---e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~~~~~~ 434 (447)
+-...+ .|+.+++ +++. .+.+.+-.. . +.-++..+|. +|.+..++ ..+.+.+.+|+....+..|
T Consensus 151 ~ds~~~--~i~~~~~~~~~g~~~~~~~f~~~~~~~g~pDGm~vD~~Gn--l~va~~g~---g~V~v~~p~G~~~~~I~~P 223 (246)
T pfam08450 151 ADSPTR--RIWAFDYDADGGLISNRRVFADFKDGDGEPDGMAVDAEGN--LWVARWGG---GKVVRFDPDGKLLGEIELP 223 (246)
T ss_pred EECCCC--EEEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEECCCCC--EEEEEECC---CEEEEECCCCCEEEEEECC
T ss_conf 718998--7999980375687678689999488785767504817999--99999379---9999997999799999899
Q ss_pred C
Q ss_conf 8
Q gi|254780548|r 435 A 435 (447)
Q Consensus 435 g 435 (447)
+
T Consensus 224 ~ 224 (246)
T pfam08450 224 A 224 (246)
T ss_pred C
T ss_conf 9
No 59
>KOG0315 consensus
Probab=98.94 E-value=1.3e-06 Score=61.42 Aligned_cols=264 Identities=16% Similarity=0.180 Sum_probs=142.5
Q ss_pred EEEEEEEECCCCCCEECCCCCCCC-HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCE
Q ss_conf 578999841555420000232337-7788999999989999975044555544178875136764421001231145540
Q gi|254780548|r 124 LRVEFRLWDVKDRKQIIGKKFFSS-PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202 (447)
Q Consensus 124 ~~v~~~L~dv~~~~~i~~~~~~~~-~~~~R~~ah~~ad~i~~~ltG~~G~f~triafv~~~~~~~~~~~~l~i~d~DG~n 202 (447)
+.-.+|+|...+|+-...-++.-. .+.+ .||-.++.. |- .+.-+ |.+-|..-.|
T Consensus 18 YDhTIRfWqa~tG~C~rTiqh~dsqVNrL-------------eiTpdk~~L----Aa------a~~qh--vRlyD~~S~n 72 (311)
T KOG0315 18 YDHTIRFWQALTGICSRTIQHPDSQVNRL-------------EITPDKKDL----AA------AGNQH--VRLYDLNSNN 72 (311)
T ss_pred CCCEEEEEEHHCCEEEEEEECCCCCEEEE-------------EECCCCCHH----HH------CCCCE--EEEEECCCCC
T ss_conf 76145532041680888883683332069-------------976871245----43------24870--6999746899
Q ss_pred EEEE--EECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCC
Q ss_conf 2688--62176402345576899848998503467644303771179717997437985244455158955677413787
Q gi|254780548|r 203 IRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280 (447)
Q Consensus 203 ~~~l--~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g 280 (447)
+.++ ..+....+.+-.|--||++. |++-+++ . +-+.|++.-.- +++-.++...-...-.|+-..| ++..++|
T Consensus 73 p~Pv~t~e~h~kNVtaVgF~~dgrWM-yTgseDg-t--~kIWdlR~~~~-qR~~~~~spVn~vvlhpnQteL-is~dqsg 146 (311)
T KOG0315 73 PNPVATFEGHTKNVTAVGFQCDGRWM-YTGSEDG-T--VKIWDLRSLSC-QRNYQHNSPVNTVVLHPNQTEL-ISGDQSG 146 (311)
T ss_pred CCCEEEEECCCCCEEEEEEEECCEEE-EECCCCC-E--EEEEECCCCCC-CCCCCCCCCCCEEEECCCCCEE-EEECCCC
T ss_conf 99536876367866899972357698-8548883-4--89986247021-1001578974358746986148-8605878
Q ss_pred CEEEEEEECCCCC-CCCCCCCCC-CCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCC----CCEEEE-EC-CCCEEEE
Q ss_conf 3038998404774-110025776-43202552167478997237765331576402567----411122-03-5300004
Q gi|254780548|r 281 AMDIYSVDLQSNA-TERLTNTLF-INISASYSPDSSQIVFESDREGKEQLYVMQSNGSD----QKRISQ-DK-EASYFDP 352 (447)
Q Consensus 281 ~~~I~~~d~~~~~-~~~lT~~~~-~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~----~~rlT~-~~-~~~~~~p 352 (447)
+..+| |+.... ..+|+.... .-.+.+-.|||+.++-.-+++ +.|+.++-+.. .+.++. .. ......-
T Consensus 147 ~irvW--Dl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG---~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C 221 (311)
T KOG0315 147 NIRVW--DLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKG---NCYVWRLLNHQTASELEPVHKFQAHNGHILRC 221 (311)
T ss_pred CEEEE--ECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCC---CEEEEECCCCCCCCCCEEHHHEECCCCEEEEE
T ss_conf 78998--71677312203798785024689868987899870787---48999736877543413711040246627889
Q ss_pred EECCCCCEEEEEECCCCCEEEEEEECCCC--CEEEEECC-CCCCCCEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEE
Q ss_conf 68776888999971499157999988999--67996627-8755437887899899999508987337999988997147
Q gi|254780548|r 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGS--QERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429 (447)
Q Consensus 353 ~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~--~~~~lt~~-~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~ 429 (447)
.+|||++.||-++.+. .+++.+.++- -+++|+.+ +..=.-.||.||++|+-.+.. ...+||.+.. |+..+
T Consensus 222 ~lSPd~k~lat~ssdk---tv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd---~~~rlW~~~~-~k~v~ 294 (311)
T KOG0315 222 LLSPDVKYLATCSSDK---TVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSD---HTARLWDLSA-GKEVR 294 (311)
T ss_pred EECCCCCEEEEECCCC---EEEEEECCCCEEEEEEEECCCCEEEEEEECCCCCEEEECCCC---CCEEECCCCC-CCEEE
T ss_conf 9889972788605885---699986177253678950477137742252585189962788---8222136556-85542
Q ss_pred E
Q ss_conf 3
Q gi|254780548|r 430 L 430 (447)
Q Consensus 430 ~ 430 (447)
+
T Consensus 295 q 295 (311)
T KOG0315 295 Q 295 (311)
T ss_pred E
T ss_conf 2
No 60
>KOG0305 consensus
Probab=98.93 E-value=1.3e-06 Score=61.39 Aligned_cols=219 Identities=12% Similarity=0.164 Sum_probs=97.1
Q ss_pred EEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEEC-CCCCEEEE--------
Q ss_conf 123114554026886217640234557689984899850346764430377117971799743-79852444--------
Q gi|254780548|r 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN-FRSMILAP-------- 263 (447)
Q Consensus 193 l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~-~~~~~~~p-------- 263 (447)
+|+-+..-.....|....+..+.+-.|+|||+.||-- ..+ ..++++|....+..+.+.. +.+...+-
T Consensus 199 vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG-~~~---g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~~~~ls 274 (484)
T KOG0305 199 VYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVG-TSD---GTVQIWDVKEQKKTRTLRGSHASRVGSLAWNSSVLS 274 (484)
T ss_pred EEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEE-ECC---CEEEEEEHHHCCCCCCCCCCCCCEEEEEECCCCEEE
T ss_conf 7887067886578665488855788987899879896-069---759997535524663146776751689862674578
Q ss_pred ---------------------------------EECCCCCEEEEEECCCCCEEEEEEEC-CCCCCCCCCCCCCCCCCEEE
Q ss_conf ---------------------------------55158955677413787303899840-47741100257764320255
Q gi|254780548|r 264 ---------------------------------RFSSNGKRALISVQKDEAMDIYSVDL-QSNATERLTNTLFINISASY 309 (447)
Q Consensus 264 ---------------------------------~wSPDG~~la~~~s~~g~~~I~~~d~-~~~~~~~lT~~~~~d~~p~~ 309 (447)
.|++||+++| +...|+...|| |. ......+++.+.+..-.-+|
T Consensus 275 sGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lA-SGgnDN~~~Iw--d~~~~~p~~~~~~H~aAVKA~aw 351 (484)
T KOG0305 275 SGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLA-SGGNDNVVFIW--DGLSPEPKFTFTEHTAAVKALAW 351 (484)
T ss_pred EECCCCCEEEEEEECCHHHHHHHHCCCCEEEEEEECCCCCEEC-CCCCCCCEEEC--CCCCCCCCEEEECCCEEEEEEEE
T ss_conf 7137776799887340665556523131156658878788434-67886514861--68886676888213200667764
Q ss_pred ECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCC-CCEEEEEEECCCCCEEEEE-
Q ss_conf 21674789972377653315764025674111220353000046877688899997149-9157999988999679966-
Q gi|254780548|r 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLV- 387 (447)
Q Consensus 310 spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~-~~~~i~~~~~~g~~~~~lt- 387 (447)
+|--+.|.-+-......+|...|..++..-+-...+ ...-+..|||..+.|+.++... ....||.+..- .....++
T Consensus 352 cP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtg-sQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~-~~~~~l~g 429 (484)
T KOG0305 352 CPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTG-SQVCSLIWSKKYKELLSTHGYSENQITLWKYPSM-KLVAELLG 429 (484)
T ss_pred CCCCCCCEEECCCCCCCEEEEEECCCCCEECCCCCC-CCEEEEEECCCCCEEEEECCCCCCCEEEEECCCC-CEEEEECC
T ss_conf 787668067748876627999875788275443368-8565579857788788730778883899965664-41100027
Q ss_pred CCCCCCCCEECCCCCEEEEEEEECCCCCEEEEEEEC
Q ss_conf 278755437887899899999508987337999988
Q gi|254780548|r 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423 (447)
Q Consensus 388 ~~~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~ 423 (447)
+....-+-+|||||..|+-. .++.+..+|.+--
T Consensus 430 H~~RVl~la~SPdg~~i~t~---a~DETlrfw~~f~ 462 (484)
T KOG0305 430 HTSRVLYLALSPDGETIVTG---AADETLRFWNLFD 462 (484)
T ss_pred CCCEEEEEEECCCCCEEEEE---CCCCCEEECCCCC
T ss_conf 76516998888898779996---0667577333368
No 61
>KOG0279 consensus
Probab=98.93 E-value=6.3e-07 Score=63.44 Aligned_cols=196 Identities=13% Similarity=0.105 Sum_probs=121.7
Q ss_pred EEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCC
Q ss_conf 02688621764023455768998489985034676443037711797179974379852444551589556774137873
Q gi|254780548|r 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281 (447)
Q Consensus 202 n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~ 281 (447)
+++...++++..+.--..|+||+.-.=.|+ ...+.+.|+.+|+..+++..+.....+.++|||.++|+ +.++|..
T Consensus 54 ~~~r~~~GHsH~v~dv~~s~dg~~alS~sw----D~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qiv-SGSrDkT 128 (315)
T KOG0279 54 VPVRRLTGHSHFVSDVVLSSDGNFALSASW----DGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIV-SGSRDKT 128 (315)
T ss_pred CEEEEEECCCEEECCEEECCCCCEEEECCC----CCEEEEEEECCCCEEEEEEECCCCEEEEEECCCCCEEE-CCCCCCE
T ss_conf 356632055337514677368746886154----65488878057917899980577568998548874133-3787630
Q ss_pred EEEEEEECCCCCCCCCCCC--CCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCC
Q ss_conf 0389984047741100257--76432025521674789972377653315764025674111220353000046877688
Q gi|254780548|r 282 MDIYSVDLQSNATERLTNT--LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359 (447)
Q Consensus 282 ~~I~~~d~~~~~~~~lT~~--~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~ 359 (447)
..+| |.-|...-.++.. ........|+|.-..-+++|.- -.--+-+.|+++-+.+.--.+..+.......||||.
T Consensus 129 iklw--ntlg~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s-~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGs 205 (315)
T KOG0279 129 IKLW--NTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSAS-WDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGS 205 (315)
T ss_pred EEEE--EECCCEEEEECCCCCCCCEEEEEECCCCCCCEEEECC-CCCEEEEECCCCCCHHHCCCCCCCCEEEEEECCCCC
T ss_conf 3564--6103279998047776608999985899974799734-774389972677541210446555177899888987
Q ss_pred EEEEEECCCCCEEEEEEECCCCCE-EEEECCCCCCCCEECCCCCEEEEEE
Q ss_conf 899997149915799998899967-9966278755437887899899999
Q gi|254780548|r 360 LIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSR 408 (447)
Q Consensus 360 ~Iaf~~~~~~~~~i~~~~~~g~~~-~~lt~~~~~e~P~wSPDG~~i~f~~ 408 (447)
..++ .+..-.+++.|++.++. .-+...-...+-.|||+--+|.-++
T Consensus 206 lcas---Ggkdg~~~LwdL~~~k~lysl~a~~~v~sl~fspnrywL~~at 252 (315)
T KOG0279 206 LCAS---GGKDGEAMLWDLNEGKNLYSLEAFDIVNSLCFSPNRYWLCAAT 252 (315)
T ss_pred EEEC---CCCCCEEEEEECCCCCEEEECCCCCEEEEEEECCCCEEEEECC
T ss_conf 7740---7988469999826786058516777376688559820576515
No 62
>KOG1274 consensus
Probab=98.92 E-value=5.6e-07 Score=63.75 Aligned_cols=178 Identities=20% Similarity=0.304 Sum_probs=82.0
Q ss_pred EEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCC-
Q ss_conf 5576899848998503467644303771179717997437985244455158955677413787303899840477411-
Q gi|254780548|r 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295 (447)
Q Consensus 217 P~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~- 295 (447)
-+++-||+.||.-| ....|-+.++......+.+..+++.+..-.++|.|+-||.+ +-+|+-.|| +++.+.+.
T Consensus 102 ~~v~g~g~~iaags----dD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvs-s~dG~v~iw--~~~~~~~~~ 174 (933)
T KOG1274 102 LAVSGSGKMIAAGS----DDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVS-SCDGKVQIW--DLQDGILSK 174 (933)
T ss_pred EEEECCCCEEEEEC----CCEEEEEEECCCCCHHEEECCCCCCEEEEEECCCCCEEEEE-ECCCEEEEE--ECCCCHHHH
T ss_conf 99925884788505----75058987424643005642567752466676888789999-528639999--855622655
Q ss_pred CCCCC--------CCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCE-EEEE-CCCCEEEEEECCCCCEEEEEE
Q ss_conf 00257--------7643202552167478997237765331576402567411-1220-353000046877688899997
Q gi|254780548|r 296 RLTNT--------LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQD-KEASYFDPVWSPQGDLIAFTK 365 (447)
Q Consensus 296 ~lT~~--------~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~r-lT~~-~~~~~~~p~wSPdG~~Iaf~~ 365 (447)
.||.- ..+-..|+|+|||.++++..-++ -+-+++.+|.+..- |... ....+..-.|||.|++||-..
T Consensus 175 tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~---~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~ 251 (933)
T KOG1274 175 TLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDN---TVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAAST 251 (933)
T ss_pred HCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCC---EEEEECCCCCEEHEEECCCCCCCCEEEEEECCCCCEEEEEC
T ss_conf 414677555544332232354658897087530577---28998168851010023654556247888768875786403
Q ss_pred CCCCCEEEEEEECCCCCEEEEECCCCCCCCEECCCCCEEEEEEE
Q ss_conf 14991579999889996799662787554378878998999995
Q gi|254780548|r 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409 (447)
Q Consensus 366 ~~~~~~~i~~~~~~g~~~~~lt~~~~~e~P~wSPDG~~i~f~~~ 409 (447)
.++ +|.+.|.++- ++..-. ...-.-.|-|++..|-|...
T Consensus 252 ~~g---~I~vWnv~t~-~~~~~~-~~Vc~~aw~p~~n~it~~~~ 290 (933)
T KOG1274 252 LDG---QILVWNVDTH-ERHEFK-RAVCCEAWKPNANAITLITA 290 (933)
T ss_pred CCC---CEEEEECCCC-HHCCCC-CEEEEEECCCCCCEEEEEEE
T ss_conf 578---3899865310-000221-01588722788980689961
No 63
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171.
Probab=98.90 E-value=6e-08 Score=70.28 Aligned_cols=126 Identities=18% Similarity=0.389 Sum_probs=73.4
Q ss_pred HHCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEE-ECC-CCCCCCCEE
Q ss_conf 750445555441788751367644210012311455402688621764023455768998489985-034-676443037
Q gi|254780548|r 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-YDD-EDILRVYLM 242 (447)
Q Consensus 165 ~ltG~~G~f~triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s-~~~-~~~~~i~~~ 242 (447)
.+||-+ -|.+|+|| .+.-.-.|.-.|+++.-++.+=-....-++.|--||||+++||-+ .|+ .+..+||+-
T Consensus 325 ~~~gtk-ky~~KLaF------RND~TgnL~yIDy~~~~~~~~EI~D~~~vyHPDISPDG~~VAFCT~~EG~~GkS~vYVR 397 (982)
T TIGR02171 325 ELTGTK-KYKAKLAF------RNDVTGNLAYIDYAKGASKVVEIEDTIKVYHPDISPDGKKVAFCTGIEGVDGKSEVYVR 397 (982)
T ss_pred HHHCCE-EEEEEEEE------ECCCCCCEEEEEECCCCCEEEEEECCCCEECCCCCCCCCEEEEECCCCCCCCCCEEEEE
T ss_conf 530770-36777787------04764332688705883369983037412027407986874576341144787438984
Q ss_pred EECCCCCE-EEEECCCCCEEEEEE--CCCCCE-EEEEECCCCCEE--------EEEEECCC---CCCCCCCC
Q ss_conf 71179717-997437985244455--158955-677413787303--------89984047---74110025
Q gi|254780548|r 243 DTRIDRAP-KRIGNFRSMILAPRF--SSNGKR-ALISVQKDEAMD--------IYSVDLQS---NATERLTN 299 (447)
Q Consensus 243 ~~~~g~~~-~~~~~~~~~~~~p~w--SPDG~~-la~~~s~~g~~~--------I~~~d~~~---~~~~~lT~ 299 (447)
+|.+.+.- ..| +-+. .--|+| .|.|.. |+|+.+...|.| =|++.-+. |++++|-+
T Consensus 398 ~Ln~~G~~LVKL-~VEn-AAIPRWrV~EnGDTvIVYV~dA~nNKDd~~F~~~STW~VpFa~GKFG~P~KLfD 467 (982)
T TIGR02171 398 DLNASGSGLVKL-DVEN-AAIPRWRVLENGDTVIVYVSDASNNKDDAEFAAESTWQVPFANGKFGKPKKLFD 467 (982)
T ss_pred CCCCCCCCCEEE-CCCC-CCCCCEEECCCCCEEEEEECCCCCCCHHHHHHHCCCEEEECCCCCCCCHHHHCC
T ss_conf 455578981220-6457-437840567998879999701667861899983488077507888786123205
No 64
>KOG1446 consensus
Probab=98.90 E-value=7e-06 Score=56.44 Aligned_cols=253 Identities=15% Similarity=0.250 Sum_probs=133.8
Q ss_pred EEEEECCCCCCEEC---CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEE-EECCCCCE
Q ss_conf 99984155542000---023233777889999999899999750445555441788751367644210012-31145540
Q gi|254780548|r 127 EFRLWDVKDRKQII---GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC-VMDRDGAN 202 (447)
Q Consensus 127 ~~~L~dv~~~~~i~---~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~f~triafv~~~~~~~~~~~~l~-i~d~DG~n 202 (447)
.++|||..+++++- .|+|=.... |. .| -.+.+.+-+. +.+ +.|. +.=.|-.-
T Consensus 37 sl~LYd~~~g~~~~ti~skkyG~~~~--~F-th----------------~~~~~i~sSt--k~d---~tIryLsl~dNky 92 (311)
T KOG1446 37 SLRLYDSLSGKQVKTINSKKYGVDLA--CF-TH----------------HSNTVIHSST--KED---DTIRYLSLHDNKY 92 (311)
T ss_pred EEEEEECCCCCEEEEEECCCCCCCEE--EE-EC----------------CCCEEEECCC--CCC---CCEEEEEEECCCE
T ss_conf 08989747883645760564455379--99-55----------------8866897467--778---8068887205816
Q ss_pred EEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCE
Q ss_conf 26886217640234557689984899850346764430377117971799743798524445515895567741378730
Q gi|254780548|r 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282 (447)
Q Consensus 203 ~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~ 282 (447)
.|..- ++...+.+-+.||-+.. |+|-... ..|.++|+++.+-.-.+ ...+. -.++|.|.|- +|+...+++
T Consensus 93 lRYF~-GH~~~V~sL~~sP~~d~--FlS~S~D--~tvrLWDlR~~~cqg~l-~~~~~-pi~AfDp~GL--ifA~~~~~~- 162 (311)
T KOG1446 93 LRYFP-GHKKRVNSLSVSPKDDT--FLSSSLD--KTVRLWDLRVKKCQGLL-NLSGR-PIAAFDPEGL--IFALANGSE- 162 (311)
T ss_pred EEECC-CCCCEEEEEEECCCCCE--EEECCCC--CEEEEEEECCCCCCEEE-ECCCC-CCEEECCCCC--EEEEECCCC-
T ss_conf 99737-87742777770678872--7850357--70786670277772477-16999-6035888776--899945997-
Q ss_pred EEEEEECCC---CCCC--CCCCCC-CCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEE----EE
Q ss_conf 389984047---7411--002577-6432025521674789972377653315764025674111220353000----04
Q gi|254780548|r 283 DIYSVDLQS---NATE--RLTNTL-FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF----DP 352 (447)
Q Consensus 283 ~I~~~d~~~---~~~~--~lT~~~-~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~----~p 352 (447)
.|-++|+.. |..+ .++... ..=+.-.|||||+.|.-+ ++.+ ++|++|+=.|.... |+.+.-+.. +.
T Consensus 163 ~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLls-T~~s--~~~~lDAf~G~~~~-tfs~~~~~~~~~~~a 238 (311)
T KOG1446 163 LIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLS-TNAS--FIYLLDAFDGTVKS-TFSGYPNAGNLPLSA 238 (311)
T ss_pred EEEEEEECCCCCCCCEEECCCCCCCCCEEEEEECCCCCEEEEE-ECCC--CEEEEECCCCCEEE-EEEECCCCCCCCEEE
T ss_conf 4899873004789852572688876422443875998789998-0897--28999714870745-576246788864117
Q ss_pred EECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCC---CCCCCEECCCCCEEEEEEEECCCCCEEEEEEECCC
Q ss_conf 68776888999971499157999988999679966278---75543788789989999950898733799998899
Q gi|254780548|r 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS---NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425 (447)
Q Consensus 353 ~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~~---~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G 425 (447)
.++|||+.|. +...+|. |++++++++....-+.+. ...-+.|.|- +.+|++.. ....+|..+.++
T Consensus 239 ~ftPds~Fvl-~gs~dg~--i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~--~~mf~sa~---s~l~fw~p~~~~ 306 (311)
T KOG1446 239 TFTPDSKFVL-SGSDDGT--IHVWNLETGKKVAVLRGPNGGPVSCVRFNPR--YAMFVSAS---SNLVFWLPDEDA 306 (311)
T ss_pred EECCCCCEEE-EECCCCC--EEEEECCCCCEEEEECCCCCCCCCCCCCCCC--EEEEEECC---CEEEEEECCCCC
T ss_conf 9878974899-8658980--8999767895766751888887403134876--03553057---358999405445
No 65
>KOG1274 consensus
Probab=98.90 E-value=1.6e-06 Score=60.79 Aligned_cols=158 Identities=13% Similarity=0.217 Sum_probs=68.2
Q ss_pred EEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECC--------CCCEEEEE
Q ss_conf 1231145540268862176402345576899848998503467644303771179717997437--------98524445
Q gi|254780548|r 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF--------RSMILAPR 264 (447)
Q Consensus 193 l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~--------~~~~~~p~ 264 (447)
|-+.+.|-..+...+++.+..+..-.+.|.|.-+|-++ -++ .++++++..+.....++.. .....-|+
T Consensus 120 vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss-~dG---~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~a 195 (933)
T KOG1274 120 VKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSS-CDG---KVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLA 195 (933)
T ss_pred EEEEECCCCCHHEEECCCCCCEEEEEECCCCCEEEEEE-CCC---EEEEEECCCCHHHHHCCCCCCCCCCCCCCEEEEEE
T ss_conf 89874246430056425677524666768887899995-286---39999855622655414677555544332232354
Q ss_pred ECCCCCEEEEEECCCCCEEEEEEECCCCCCC-CCC-CC-CCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEE
Q ss_conf 5158955677413787303899840477411-002-57-76432025521674789972377653315764025674111
Q gi|254780548|r 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLT-NT-LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341 (447)
Q Consensus 265 wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~-~lT-~~-~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rl 341 (447)
|+|||.++|+....+ .+-+++.++.... .|- +. .+.-..-+|||.|++|+ .|+-.| ||-+.|.++-+. +
T Consensus 196 W~Pk~g~la~~~~d~---~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiA-As~~~g--~I~vWnv~t~~~-~- 267 (933)
T KOG1274 196 WHPKGGTLAVPPVDN---TVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIA-ASTLDG--QILVWNVDTHER-H- 267 (933)
T ss_pred ECCCCCEEEEECCCC---EEEEECCCCCEEHEEECCCCCCCCEEEEEECCCCCEEE-EECCCC--CEEEEECCCCHH-C-
T ss_conf 658897087530577---28998168851010023654556247888768875786-403578--389986531000-0-
Q ss_pred EEECCCCEEEEEECCCCCEEEEE
Q ss_conf 22035300004687768889999
Q gi|254780548|r 342 SQDKEASYFDPVWSPQGDLIAFT 364 (447)
Q Consensus 342 T~~~~~~~~~p~wSPdG~~Iaf~ 364 (447)
......-.-+|-|++..|-++
T Consensus 268 --~~~~~Vc~~aw~p~~n~it~~ 288 (933)
T KOG1274 268 --EFKRAVCCEAWKPNANAITLI 288 (933)
T ss_pred --CCCCEEEEEECCCCCCEEEEE
T ss_conf --221015887227889806899
No 66
>PRK10115 protease 2; Provisional
Probab=98.87 E-value=4.4e-06 Score=57.81 Aligned_cols=262 Identities=11% Similarity=0.110 Sum_probs=128.1
Q ss_pred CCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCC--CCCCCCEEEECCCCC-E
Q ss_conf 4417887513676442100123114554026886217640234557689984899850346--764430377117971-7
Q gi|254780548|r 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE--DILRVYLMDTRIDRA-P 250 (447)
Q Consensus 174 ~triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~--~~~~i~~~~~~~g~~-~ 250 (447)
.+.+||.... ++...+.|.++|..... .|-..-.....+.+|++|++.+.|+..... ...+||...+.+... -
T Consensus 138 g~~lAys~d~--~Gse~~~i~V~dl~Tg~--~l~d~i~~~~~~i~W~~D~~~fyY~~~~~~~~rp~kv~~H~lGT~~~eD 213 (686)
T PRK10115 138 NTIMALAEDF--LSRRQYGLRFRNLETGN--WYPELLDNVEPSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGTPASQD 213 (686)
T ss_pred CCEEEEEEEC--CCCEEEEEEEEECCCCC--CCCEEECCCCCEEEEECCCCEEEEEECCCCCCCHHHEEEEECCCCCCCC
T ss_conf 9778799826--98669999999888886--5763303153207993799899999557677784367986168995448
Q ss_pred EEEECCCC--CEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCC--CCC-CCCCCCCCEEEECCCCEEEEEEC----
Q ss_conf 99743798--5244455158955677413787303899840477411--002-57764320255216747899723----
Q gi|254780548|r 251 KRIGNFRS--MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLT-NTLFINISASYSPDSSQIVFESD---- 321 (447)
Q Consensus 251 ~~~~~~~~--~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~--~lT-~~~~~d~~p~~spDG~~I~f~Sd---- 321 (447)
+++-..+. ...+..-|.||+.|++..+....+++|.++.+..... .+. ...+. +-.....|..+++.+|
T Consensus 214 ~LI~ee~d~~~~v~~~~s~d~~yl~I~~~~~~tse~~ll~~~~~~~~p~~~~~r~~~~--~y~v~~~~~~~yi~TN~~a~ 291 (686)
T PRK10115 214 ELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDH--EYSLDHYQHRFYLRSNRHGK 291 (686)
T ss_pred EEEEEECCCCEEEEEEECCCCCEEEEEEECCCCCCEEEEECCCCCCCCEEEEECCCCC--EEEEECCCCEEEEEECCCCC
T ss_conf 7999807886589877358886189997348777469997668877854874436797--89875048689998378887
Q ss_pred ------------------------------------------CCCCCCEEEEEECCCCCCEEEEECCCCEEEEEE--CCC
Q ss_conf ------------------------------------------776533157640256741112203530000468--776
Q gi|254780548|r 322 ------------------------------------------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVW--SPQ 357 (447)
Q Consensus 322 ------------------------------------------r~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~w--SPd 357 (447)
+.|-++|.+++..+.+...|.+........... .++
T Consensus 292 nfkl~~~~~~~~~~W~~vi~~~~~~~l~~~~~~~d~lv~~~r~~gl~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 371 (686)
T PRK10115 292 NFGLYRTRVRDEQQWEELIPPRENIMLEGFTLFTDWLVVEERQRGLTSLRQINRKTREVIGIAFDDPAYVTWIAYNPEPE 371 (686)
T ss_pred CCEEEEECCCCHHHCEEECCCCCCCEEEEEEEECCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCC
T ss_conf 84489931689544710037888717847999646499999718831899985899746534158886798976555788
Q ss_pred CCEEE--EEECCCCCEEEEEEECCCCCEEEEECCCCCCCCEECCCCCEE--EEEEEECCCCCEE--EEEEE--CCCCCEE
Q ss_conf 88899--997149915799998899967996627875543788789989--9999508987337--99998--8997147
Q gi|254780548|r 358 GDLIA--FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL--IFSRKKDGDTGSK--LYSID--LNGRNET 429 (447)
Q Consensus 358 G~~Ia--f~~~~~~~~~i~~~~~~g~~~~~lt~~~~~e~P~wSPDG~~i--~f~~~~~g~~~~~--l~~~~--~~G~~~~ 429 (447)
.+.+- |++... ...+|.+|+++++.+.+.... -|.|-|+.-.. +|...++|...+- +|.-+ .+|.++.
T Consensus 372 s~~~~~~ysS~~t-P~tiy~yD~~t~~~~~~~~~~---v~gfd~~~Y~~~rv~~~SkDGt~VP~siv~rk~~~~dg~~P~ 447 (686)
T PRK10115 372 TSRLRYGYSSMTT-PDTLFELDMDTGERRVLKQTE---VPGFDAANYRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPL 447 (686)
T ss_pred CCEEEEEEECCCC-CCCEEEEECCCCCEEEEEECC---CCCCCCCCEEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCE
T ss_conf 8859999825889-981289874899465455224---688565541899999988999783179998068876789877
Q ss_pred ECCCCC---CCCCCCCCCC
Q ss_conf 336788---7367531655
Q gi|254780548|r 430 LINTPA---YASDPQWVGF 445 (447)
Q Consensus 430 ~~~~~g---~~~~P~WsP~ 445 (447)
++..-| -..+|.|||-
T Consensus 448 lLyGYG~ygis~~p~Fs~~ 466 (686)
T PRK10115 448 LVYGYGSYGASIDADFSFS 466 (686)
T ss_pred EEEEECCCCCCCCCCCCHH
T ss_conf 9999764666327862665
No 67
>pfam06433 Me-amine-dh_H Methylamine dehydrogenase heavy chain (MADH). Methylamine dehydrogenase (EC:1.4.99.3) a periplasmic quinoprotein found in several methyltrophic bacteria. Induced when grown on methylamine as a carbon source MADH catalyses the oxidative deamination of amines to there corresponding aldehydes. MADH is a hetero- tetramer, comprised of two heavy chains (H) and two light chains (L). The H-chain forms a beta-propeller like structure.
Probab=98.87 E-value=9.1e-06 Score=55.66 Aligned_cols=207 Identities=12% Similarity=0.196 Sum_probs=107.5
Q ss_pred EECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCC
Q ss_conf 57689984899850346764430377117971799743798524445515895567741378730389984047741100
Q gi|254780548|r 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297 (447)
Q Consensus 218 ~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~l 297 (447)
..|+||+.+++--+ .....|-++|+...+-.. ..+.||-.. --|-|+.=.+..-.||...-..+|.+|....+-
T Consensus 101 ~ls~d~k~l~v~N~--TPa~SVsVVDl~~~~~v~-ei~tPGC~~---iyP~~~~~F~~~CgDG~l~~v~ld~~G~~~~~~ 174 (342)
T pfam06433 101 SLTPDNKTLLFYQF--SPSPAVGVVDLEGKAFVR-MMDVPDCYH---IFPTANQTFFMHCRDGSLAQVGYDDKGNTKMKP 174 (342)
T ss_pred EECCCCCEEEEECC--CCCCEEEEEECCCCCEEE-EECCCCEEE---EEECCCCCEEEECCCCCEEEEEECCCCCEEEEC
T ss_conf 23679868999916--887657899876660567-606898789---964689872788379850799837998500302
Q ss_pred CCCCCCC-----CCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEE-EECCCC-EEEEEECCCCCE-EEEEE----
Q ss_conf 2577643-----20255216747899723776533157640256741112-203530-000468776888-99997----
Q gi|254780548|r 298 TNTLFIN-----ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEAS-YFDPVWSPQGDL-IAFTK---- 365 (447)
Q Consensus 298 T~~~~~d-----~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT-~~~~~~-~~~p~wSPdG~~-Iaf~~---- 365 (447)
+.-...+ ..|.++.++-+++|.|= .| +||.+++.+..++-+- ++.... .....|-|-|-. ++|..
T Consensus 175 ~~~F~~~~dplf~~pa~~~~~g~~vf~sy-~G--~V~~~~~s~~~~~~~~~w~~~~~~e~a~~WRPGG~Q~~A~h~~~~~ 251 (342)
T pfam06433 175 TEVFHGEDEYLINHPAYSNKSGRLVWPTY-TG--KIFQADLSSKGAKFLKPIEAFTEAEKADGWRPGGWQQVAYHRARDR 251 (342)
T ss_pred CCCCCCCCCCCCCCCCEECCCCEEEEEEE-CC--EEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCE
T ss_conf 45436777532436536588877999961-76--6999762777513747713678610025847662151677557880
Q ss_pred ----CC-C-------CCEEEEEEECCCCC-EEEEECCCCCCCCEECCCCCEEEEEEEECCCCCEEEEEEEC-CCCCEEEC
Q ss_conf ----14-9-------91579999889996-79966278755437887899899999508987337999988-99714733
Q gi|254780548|r 366 ----FS-G-------EKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLI 431 (447)
Q Consensus 366 ----~~-~-------~~~~i~~~~~~g~~-~~~lt~~~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~-~G~~~~~~ 431 (447)
.+ + +.-+|+++|+.+++ ..++.-+....+-..|.|.+-++|+...++. .|++.|. +|+..+-+
T Consensus 252 lyvlmh~g~~~tHkdpgteVWv~D~~t~krv~ri~L~~~~~si~Vsqd~~P~Lya~s~~~~---~l~v~Da~tgk~~rsi 328 (342)
T pfam06433 252 IYLLADQRAKWTHKTASRFVFVVDATTGKRLRKIELGHEIDSINVSQDAKPLLYALSAGAK---TLFIFDAVTGKELSSV 328 (342)
T ss_pred EEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEEEECCCCCCEEEEECCCCC---EEEEEECCCCCEEEEH
T ss_conf 9999737987641389628999988877299985188804479986799845999728996---0899867788636550
Q ss_pred CCCCC
Q ss_conf 67887
Q gi|254780548|r 432 NTPAY 436 (447)
Q Consensus 432 ~~~g~ 436 (447)
..-|.
T Consensus 329 ~~lG~ 333 (342)
T pfam06433 329 DQLGR 333 (342)
T ss_pred HHCCC
T ss_conf 10477
No 68
>KOG2055 consensus
Probab=98.84 E-value=1.6e-07 Score=67.50 Aligned_cols=196 Identities=12% Similarity=0.127 Sum_probs=107.1
Q ss_pred EEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCE--E--EEEECCCCCEEEEEECCCCCEEEEEEEC
Q ss_conf 23455768998489985034676443037711797179974379852--4--4455158955677413787303899840
Q gi|254780548|r 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--L--APRFSSNGKRALISVQKDEAMDIYSVDL 289 (447)
Q Consensus 214 ~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~--~--~p~wSPDG~~la~~~s~~g~~~I~~~d~ 289 (447)
+.+.+|+|+|+..++++-+ ..-.|.+|+.+++.. .+...-|+. + .-..||||+.||+. +.+..|+++..
T Consensus 260 i~~a~f~p~G~~~i~~s~r---rky~ysyDle~ak~~-k~~~~~g~e~~~~e~FeVShd~~fia~~---G~~G~I~lLha 332 (514)
T KOG2055 260 IQKAEFAPNGHSVIFTSGR---RKYLYSYDLETAKVT-KLKPPYGVEEKSMERFEVSHDSNFIAIA---GNNGHIHLLHA 332 (514)
T ss_pred CCEEEECCCCCEEEEECCC---CEEEEEEECCCCCCC-CCCCCCCCCCCHHHEEEECCCCCEEEEC---CCCCEEEEEHH
T ss_conf 0104664899468986055---137898510001111-0347877533110026743778769981---45764772314
Q ss_pred CCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCE-EEEECCCCEEEEEECCCCCEEEEEECCC
Q ss_conf 477411002577643202552167478997237765331576402567411-1220353000046877688899997149
Q gi|254780548|r 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSG 368 (447)
Q Consensus 290 ~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~r-lT~~~~~~~~~p~wSPdG~~Iaf~~~~~ 368 (447)
.+++.--=-.-.|.-.+-.||.||+.|+ .|.-.| |+|+.|+......+ -+.+|...-.+-..|++|.++| +..+.
T Consensus 333 kT~eli~s~KieG~v~~~~fsSdsk~l~-~~~~~G--eV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA-~GS~~ 408 (514)
T KOG2055 333 KTKELITSFKIEGVVSDFTFSSDSKELL-ASGGTG--EVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLA-TGSDS 408 (514)
T ss_pred HHHHHHHEEEECCEEEEEEEECCCCEEE-EECCCC--EEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEE-ECCCC
T ss_conf 4443441134552876679805883899-986886--4999966886057887645854404552057876488-51676
Q ss_pred CCEEEEEEEC--CCCCEEEEECC----CCCCCCEECCCCCEEEEEEEECCCCCEEEEEE
Q ss_conf 9157999988--99967996627----87554378878998999995089873379999
Q gi|254780548|r 369 EKFAIGVMKK--DGSQERLLVED----SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421 (447)
Q Consensus 369 ~~~~i~~~~~--~g~~~~~lt~~----~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~ 421 (447)
|.-+||-.+- .++..+.++.- ....+-.|+||++-++-.+... +...+|.-+
T Consensus 409 GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~-knalrLVHv 466 (514)
T KOG2055 409 GIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVK-KNALRLVHV 466 (514)
T ss_pred CEEEEECCCHHHCCCCCCCHHHHHHHHEEEEEEEECCCHHHHHHHHHCC-CCCEEEEEC
T ss_conf 6488714630101479973356653430001222376124346544536-561478851
No 69
>KOG0273 consensus
Probab=98.81 E-value=7.7e-07 Score=62.84 Aligned_cols=75 Identities=13% Similarity=0.238 Sum_probs=49.6
Q ss_pred EEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCC
Q ss_conf 23455768998489985034676443037711797179974379852444551589556774137873038998404774
Q gi|254780548|r 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293 (447)
Q Consensus 214 ~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~ 293 (447)
+-+-.|+.||.-||+-+|. + ..+|| +. .|.....+..++|..++-.|+-+|..|+ +...|+..-|| |..+|+
T Consensus 238 VT~L~Wn~~G~~LatG~~~-G-~~riw--~~-~G~l~~tl~~HkgPI~slKWnk~G~yil-S~~vD~ttilw--d~~~g~ 309 (524)
T KOG0273 238 VTSLDWNNDGTLLATGSED-G-EARIW--NK-DGNLISTLGQHKGPIFSLKWNKKGTYIL-SGGVDGTTILW--DAHTGT 309 (524)
T ss_pred CCEEEECCCCCEEEEEECC-C-EEEEE--EC-CCHHHHHHHCCCCCEEEEEECCCCCEEE-ECCCCCCEEEE--ECCCCE
T ss_conf 6168735898768886048-6-79999--25-8546645441578647999748887788-42677618998--636766
Q ss_pred CCC
Q ss_conf 110
Q gi|254780548|r 294 TER 296 (447)
Q Consensus 294 ~~~ 296 (447)
..|
T Consensus 310 ~~q 312 (524)
T KOG0273 310 VKQ 312 (524)
T ss_pred EEE
T ss_conf 999
No 70
>PRK10115 protease 2; Provisional
Probab=98.80 E-value=1.5e-05 Score=54.25 Aligned_cols=116 Identities=6% Similarity=0.039 Sum_probs=56.4
Q ss_pred EEEECCCCCEEEEEEECC-CCCCCCCEEEECCCCCEE-EEECCCCCEEEEEECCCCCEEEEEECCCC---CEEEEEEECC
Q ss_conf 455768998489985034-676443037711797179-97437985244455158955677413787---3038998404
Q gi|254780548|r 216 EPRFSPNQQKVAYATYDD-EDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDE---AMDIYSVDLQ 290 (447)
Q Consensus 216 sP~wSpDG~~Iay~s~~~-~~~~~i~~~~~~~g~~~~-~~~~~~~~~~~p~wSPDG~~la~~~s~~g---~~~I~~~d~~ 290 (447)
.-+.||||+.+||..-.. .....|++.|+.+|+... .+. ...++.+|++|++.+.|+..... ..+||...+.
T Consensus 131 ~~~~SpDg~~lAys~d~~Gse~~~i~V~dl~Tg~~l~d~i~---~~~~~i~W~~D~~~fyY~~~~~~~~rp~kv~~H~lG 207 (686)
T PRK10115 131 GMAITPDNTIMALAEDFLSRRQYGLRFRNLETGNWYPELLD---NVEPSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIG 207 (686)
T ss_pred EEEECCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCEEEC---CCCCEEEEECCCCEEEEEECCCCCCCHHHEEEEECC
T ss_conf 38988999778799826986699999998888865763303---153207993799899999557677784367986168
Q ss_pred CCCCC-CCCCC---CCCCCCEEEECCCCEEEEEECCCCCCCEEEEEEC
Q ss_conf 77411-00257---7643202552167478997237765331576402
Q gi|254780548|r 291 SNATE-RLTNT---LFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334 (447)
Q Consensus 291 ~~~~~-~lT~~---~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~ 334 (447)
+.+.. .|-.. ...-++..-|.||+.|+..+..+...++|.++.+
T Consensus 208 T~~~eD~LI~ee~d~~~~v~~~~s~d~~yl~I~~~~~~tse~~ll~~~ 255 (686)
T PRK10115 208 TPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAE 255 (686)
T ss_pred CCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCCCEEEEECC
T ss_conf 995448799980788658987735888618999734877746999766
No 71
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.80 E-value=2.2e-06 Score=59.76 Aligned_cols=265 Identities=18% Similarity=0.211 Sum_probs=143.9
Q ss_pred EEEEECCCCCCEECCCCCCCCHH-HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEE
Q ss_conf 99984155542000023233777-88999999989999975044555544178875136764421001231145540268
Q gi|254780548|r 127 EFRLWDVKDRKQIIGKKFFSSPA-SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205 (447)
Q Consensus 127 ~~~L~dv~~~~~i~~~~~~~~~~-~~R~~ah~~ad~i~~~ltG~~G~f~triafv~~~~~~~~~~~~l~i~d~DG~n~~~ 205 (447)
+..+||..+|..|.+..+...+. .|..+--...|....++-|. +|++-+. +.|.-+
T Consensus 109 ~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~~----------------------sl~i~e~-t~n~~~ 165 (561)
T COG5354 109 NVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVVGS----------------------SLYIHEI-TDNIEE 165 (561)
T ss_pred CEEEEECCCCEEEEECCCCCCCCCCCCEEEEEECCHHHHHHCCC----------------------EEEEEEC-CCCCCC
T ss_conf 50588525751685045567753366125653133444400067----------------------1799965-786453
Q ss_pred ----EEECCCCCEEEEEECCCC--CEEEEEEECCC-CCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEEC-
Q ss_conf ----862176402345576899--84899850346-7644303771179717997437985244455158955677413-
Q gi|254780548|r 206 ----LTPSRDQILFEPRFSPNQ--QKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ- 277 (447)
Q Consensus 206 ----l~~~~~~~~~sP~wSpDG--~~Iay~s~~~~-~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s- 277 (447)
.++ ...+ ..-.|||-| ..|||-+-+.. ....+-++.+..+......+=++-....-.|.+-|+.|++-..
T Consensus 166 ~p~~~lr-~~gi-~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t 243 (561)
T COG5354 166 HPFKNLR-PVGI-LDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMT 243 (561)
T ss_pred CCHHHCC-CCCE-EEEEECCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCEEEEECCCCEEEEEEEE
T ss_conf 7411235-3311-4678657778745799754347997479999736897666655576135289982378669999987
Q ss_pred -------CCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCC-EEEEEECCCCCCEEEEECCCCE
Q ss_conf -------78730389984047741100257764320255216747899723776533-1576402567411122035300
Q gi|254780548|r 278 -------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASY 349 (447)
Q Consensus 278 -------~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~q-iy~~~~~g~~~~rlT~~~~~~~ 349 (447)
.-|.++||++++.....+-.-.-.+...+-+|+|++++.+-.+. -.|+ +-..++.|. .+-.-.++.-
T Consensus 244 ~~ksnKsyfgesnLyl~~~~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g--~~pa~~s~~~lr~N-l~~~~Pe~~r-- 318 (561)
T COG5354 244 HTKSNKSYFGESNLYLLRITERSIPVEKDLKDPVHDFTWEPLSSRFAVISG--YMPASVSVFDLRGN-LRFYFPEQKR-- 318 (561)
T ss_pred EEECCCCEECCCEEEEEEECCCCCCEECCCCCCCEEEEECCCCCCEEEEEC--CCCCCEEECCCCCC-EEEECCCCCC--
T ss_conf 540366233243479985114653202156665114554456884468852--56310332145654-6895587665--
Q ss_pred EEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEE-CCCCCCCCEECCCCCEEEEE--EEE-CCCCCEEEEEE
Q ss_conf 00468776888999971499157999988999679966-27875543788789989999--950-89873379999
Q gi|254780548|r 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFS--RKK-DGDTGSKLYSI 421 (447)
Q Consensus 350 ~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt-~~~~~e~P~wSPDG~~i~f~--~~~-~g~~~~~l~~~ 421 (447)
..+.+||.+++|++....+-.-+|-++++.|.....-+ .+.+...-.|||||+++.-. +.+ .-+....||-+
T Consensus 319 NT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v 394 (561)
T COG5354 319 NTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNGLNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDV 394 (561)
T ss_pred CCCCCCCCCCEEEEECCCCCCCCEEEECCCCCEEEEEEEECCCCEEEECCCCCEEEEECCCCCCCCCCCCEEEEEE
T ss_conf 6401267644899953786535358862677658999861377347402698617983178832256762478982
No 72
>KOG0273 consensus
Probab=98.76 E-value=5.2e-06 Score=57.32 Aligned_cols=34 Identities=15% Similarity=0.320 Sum_probs=16.7
Q ss_pred EEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEE
Q ss_conf 12311455402688621764023455768998489
Q gi|254780548|r 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227 (447)
Q Consensus 193 l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Ia 227 (447)
+.|-+.||.-...|-.++++ +++-.|+.+|..|+
T Consensus 259 ~riw~~~G~l~~tl~~HkgP-I~slKWnk~G~yil 292 (524)
T KOG0273 259 ARIWNKDGNLISTLGQHKGP-IFSLKWNKKGTYIL 292 (524)
T ss_pred EEEEECCCHHHHHHHCCCCC-EEEEEECCCCCEEE
T ss_conf 99992585466454415786-47999748887788
No 73
>pfam08662 eIF2A Eukaryotic translation initiation factor eIF2A. This is a family of eukaryotic translation initiation factors.
Probab=98.76 E-value=8.7e-07 Score=62.48 Aligned_cols=139 Identities=18% Similarity=0.237 Sum_probs=56.7
Q ss_pred EECCCCCEEEEEEE-CCCC-------CCCCCEEEECCCCCEEEEE-CCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEE
Q ss_conf 57689984899850-3467-------6443037711797179974-3798524445515895567741378730389984
Q gi|254780548|r 218 RFSPNQQKVAYATY-DDED-------ILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288 (447)
Q Consensus 218 ~wSpDG~~Iay~s~-~~~~-------~~~i~~~~~~~g~~~~~~~-~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d 288 (447)
.|+|.|..++...- +..+ ..++|.+... +.....+. ...|.....+|+|+|++.++.... ....+-.++
T Consensus 12 ~W~~~G~~llv~~~t~~dkt~ksyyg~~~l~~l~~~-~~~~~~v~l~~~gpv~d~~W~P~g~~F~vi~G~-~p~~~~ly~ 89 (194)
T pfam08662 12 KWNKNGTYLLVLVSTDVDKTNKSYYGEFNLYLIGET-GGPDEVVELDKEGPIHDFAWSPNGKEFAVIYGY-MPAKITFFD 89 (194)
T ss_pred EECCCCCEEEEEEEEEECCCCCEEECCEEEEEEECC-CCEEEEEEECCCCCEEEEEECCCCCEEEEEECC-CCCEEEEEC
T ss_conf 977868999999986354789738143589999379-980579981688847999987699889999837-997479994
Q ss_pred CCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEC--CCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEE
Q ss_conf 047741100257764320255216747899723--7765331576402567411122035300004687768889999
Q gi|254780548|r 289 LQSNATERLTNTLFINISASYSPDSSQIVFESD--REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364 (447)
Q Consensus 289 ~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sd--r~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~ 364 (447)
+.+..+..+-..+.. .-.|||.|+.|+...- -.| +|-..|.+ +.+.|..........-.|||||+.++..
T Consensus 90 ~~~~~i~~f~~~~~N--~i~wsP~G~~~~lagfgnl~G--~l~f~d~~--~~k~i~~~~~~~~t~~~WsPdGr~~~ta 161 (194)
T pfam08662 90 LKGNVIHSLGEQPRN--TIFWSPFGRLVLLAGFGNLAG--QIEFWDVK--NKKKIATAEASNATDCEWSPDGRYFLTA 161 (194)
T ss_pred CCCEEEEEECCCCCC--EEEECCCCCEEEEEECCCCCC--EEEEEECC--CCEEEEECCCCCEEEEEECCCCCEEEEE
T ss_conf 761699986898732--599999999999987789982--39999999--9689867154977789998999999999
No 74
>KOG1407 consensus
Probab=98.72 E-value=6.8e-06 Score=56.54 Aligned_cols=246 Identities=13% Similarity=0.169 Sum_probs=126.5
Q ss_pred EEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCC-CCEEEEEE
Q ss_conf 98415554200002323377788999999989999975044555544178875136764421001231145-54026886
Q gi|254780548|r 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-GANIRYLT 207 (447)
Q Consensus 129 ~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~f~triafv~~~~~~~~~~~~l~i~d~D-G~n~~~l~ 207 (447)
.+|++...+.+.+..|.+...+.-+ + .--.+-. - .|.+.++++ .|.+-|.- |.-..++-
T Consensus 45 ~v~n~e~~r~~~~~~~~gh~~svdq--------l---~w~~~~~---d-~~atas~dk-----~ir~wd~r~~k~~~~i~ 104 (313)
T KOG1407 45 SVWNLERDRFRKELVYRGHTDSVDQ--------L---CWDPKHP---D-LFATASGDK-----TIRIWDIRSGKCTARIE 104 (313)
T ss_pred EEEEECCHHHHHHHCCCCCCCCHHH--------H---EECCCCC---C-CEEEECCCC-----EEEEEEECCCCEEEEEE
T ss_conf 9998323022223056677755444--------2---0189997---6-057841895-----29999811485788863
Q ss_pred ECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEE
Q ss_conf 21764023455768998489985034676443037711797179974379852444551589556774137873038998
Q gi|254780548|r 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287 (447)
Q Consensus 208 ~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~ 287 (447)
...+.+ .-.|||||+.+++... + -.|-..|.++-+. ..-..++-..-.-.|+-+ +.+.|.-+..|..+|..+
T Consensus 105 ~~~eni--~i~wsp~g~~~~~~~k---d-D~it~id~r~~~~-~~~~~~~~e~ne~~w~~~-nd~Fflt~GlG~v~ILsy 176 (313)
T KOG1407 105 TKGENI--NITWSPDGEYIAVGNK---D-DRITFIDARTYKI-VNEEQFKFEVNEISWNNS-NDLFFLTNGLGCVEILSY 176 (313)
T ss_pred CCCCCE--EEEECCCCCEEEEECC---C-CCEEEEEECCCCE-EEHHCCCCEEEEEEECCC-CCEEEEECCCCEEEEEEC
T ss_conf 367506--9998699987998547---6-6079997001423-001015303024564178-877999448865899733
Q ss_pred ECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCC-CCEEEEECCCCEEEEEECCCCCEEEEEEC
Q ss_conf 40477411002577643202552167478997237765331576402567-41112203530000468776888999971
Q gi|254780548|r 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFTKF 366 (447)
Q Consensus 288 d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~-~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~ 366 (447)
. +=+.+.-|+.|++.=.--.|+|||++++--|- ..++-..|++--- +|-++ .-++......+|-||++||-.+.
T Consensus 177 p-sLkpv~si~AH~snCicI~f~p~GryfA~GsA---DAlvSLWD~~ELiC~R~is-RldwpVRTlSFS~dg~~lASaSE 251 (313)
T KOG1407 177 P-SLKPVQSIKAHPSNCICIEFDPDGRYFATGSA---DALVSLWDVDELICERCIS-RLDWPVRTLSFSHDGRMLASASE 251 (313)
T ss_pred C-CCCCCCCCCCCCCCEEEEEECCCCCEEEECCC---CCEEECCCHHHHHHHEEEC-CCCCCEEEEEECCCCCEEECCCC
T ss_conf 6-55611201257765399997799866741454---3036505726754332310-13673478875238532302576
Q ss_pred CCCCEEEEEEECCCCC-EEEEECCCCCCCCEECCCCCEEEEEEEE
Q ss_conf 4991579999889996-7996627875543788789989999950
Q gi|254780548|r 367 SGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKK 410 (447)
Q Consensus 367 ~~~~~~i~~~~~~g~~-~~~lt~~~~~e~P~wSPDG~~i~f~~~~ 410 (447)
+- -|-+-+..+|. .-.+-..+.--...|-|.---++|+-..
T Consensus 252 Dh---~IDIA~vetGd~~~eI~~~~~t~tVAWHPk~~LLAyA~dd 293 (313)
T KOG1407 252 DH---FIDIAEVETGDRVWEIPCEGPTFTVAWHPKRPLLAYACDD 293 (313)
T ss_pred CC---EEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEECC
T ss_conf 50---6886744568857873226874257766887355687437
No 75
>KOG1446 consensus
Probab=98.70 E-value=3e-05 Score=52.22 Aligned_cols=238 Identities=13% Similarity=0.185 Sum_probs=127.8
Q ss_pred EEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCE
Q ss_conf 01231145540268862176402345576899848998503467644303771179717997437985244455158955
Q gi|254780548|r 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271 (447)
Q Consensus 192 ~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~ 271 (447)
+||=+ .+|.-.+.+. +..+-+-.-+|......+.|.|-. ....|...++.+++-.+--..++....+-.-||-+.
T Consensus 39 ~LYd~-~~g~~~~ti~-skkyG~~~~~Fth~~~~~i~sStk--~d~tIryLsl~dNkylRYF~GH~~~V~sL~~sP~~d- 113 (311)
T KOG1446 39 RLYDS-LSGKQVKTIN-SKKYGVDLACFTHHSNTVIHSSTK--EDDTIRYLSLHDNKYLRYFPGHKKRVNSLSVSPKDD- 113 (311)
T ss_pred EEEEC-CCCCEEEEEE-CCCCCCCEEEEECCCCEEEECCCC--CCCCEEEEEEECCCEEEECCCCCCEEEEEEECCCCC-
T ss_conf 98974-7883645760-564455379995588668974677--788068887205816997378774277777067887-
Q ss_pred EEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCE---EEEECCCC
Q ss_conf 677413787303899840477411002577643202552167478997237765331576402567411---12203530
Q gi|254780548|r 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR---ISQDKEAS 348 (447)
Q Consensus 272 la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~r---lT~~~~~~ 348 (447)
...+.+.|....+|- +...+-+-+....+. .-++|.|.|--.|-.++. ..-+||-+..-++.+-+ ++.+....
T Consensus 114 ~FlS~S~D~tvrLWD--lR~~~cqg~l~~~~~-pi~AfDp~GLifA~~~~~-~~IkLyD~Rs~dkgPF~tf~i~~~~~~e 189 (311)
T KOG1446 114 TFLSSSLDKTVRLWD--LRVKKCQGLLNLSGR-PIAAFDPEGLIFALANGS-ELIKLYDLRSFDKGPFTTFSITDNDEAE 189 (311)
T ss_pred EEEECCCCCEEEEEE--ECCCCCCEEEECCCC-CCEEECCCCCEEEEECCC-CEEEEEEECCCCCCCCEEECCCCCCCCC
T ss_conf 278503577078667--027777247716999-603588877689994599-7489987300478985257268887642
Q ss_pred EEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCC-----CCCEECCCCCEEEEEEEECCCCCEEEEEEEC
Q ss_conf 00046877688899997149915799998899967996627875-----5437887899899999508987337999988
Q gi|254780548|r 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-----QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423 (447)
Q Consensus 349 ~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~~~~-----e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~ 423 (447)
+....+||||+.|..+...+ .++++|.=.|....--++..+ -+.+|+|||++|+= ...+|+ ..+|.+.
T Consensus 190 w~~l~FS~dGK~iLlsT~~s---~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~-gs~dg~--i~vw~~~- 262 (311)
T KOG1446 190 WTDLEFSPDGKSILLSTNAS---FIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLS-GSDDGT--IHVWNLE- 262 (311)
T ss_pred EEEEEECCCCCEEEEEECCC---CEEEEECCCCCEEEEEEECCCCCCCCEEEEECCCCCEEEE-ECCCCC--EEEEECC-
T ss_conf 24438759987899980897---2899971487074557624678886411798789748998-658980--8999767-
Q ss_pred CCCCEEECCC--CCCCCCCCCCCC
Q ss_conf 9971473367--887367531655
Q gi|254780548|r 424 NGRNETLINT--PAYASDPQWVGF 445 (447)
Q Consensus 424 ~G~~~~~~~~--~g~~~~P~WsP~ 445 (447)
+|.....+.. .+.++-+.|.|-
T Consensus 263 tg~~v~~~~~~~~~~~~~~~fnP~ 286 (311)
T KOG1446 263 TGKKVAVLRGPNGGPVSCVRFNPR 286 (311)
T ss_pred CCCEEEEECCCCCCCCCCCCCCCC
T ss_conf 895766751888887403134876
No 76
>KOG0772 consensus
Probab=98.68 E-value=1.1e-06 Score=61.73 Aligned_cols=183 Identities=15% Similarity=0.135 Sum_probs=95.4
Q ss_pred EEEEECCCCCEEEEEEECCCCC------------EEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCC
Q ss_conf 0123114554026886217640------------2345576899848998503467644303771179717997437985
Q gi|254780548|r 192 SLCVMDRDGANIRYLTPSRDQI------------LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259 (447)
Q Consensus 192 ~l~i~d~DG~n~~~l~~~~~~~------------~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~ 259 (447)
+.-+.|.||...-...++.-+| +..-+|.|+.+...-++ ......+||-.+- +.+..+++ ..+..
T Consensus 237 qakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~-s~DgtlRiWdv~~-~k~q~qVi-k~k~~ 313 (641)
T KOG0772 237 QAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTC-SYDGTLRIWDVNN-TKSQLQVI-KTKPA 313 (641)
T ss_pred CEEEECCCCCEEEEEECCCHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEE-CCCCCEEEEECCC-CHHHEEEE-EECCC
T ss_conf 226773677535654053344454331577145663133366762426873-2777278873477-53012677-65367
Q ss_pred ------EEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCC---CCCCCCC-CCEEEECCCCEEEEEECCCCCCCEE
Q ss_conf ------24445515895567741378730389984047741100---2577643-2025521674789972377653315
Q gi|254780548|r 260 ------ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL---TNTLFIN-ISASYSPDSSQIVFESDREGKEQLY 329 (447)
Q Consensus 260 ------~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~l---T~~~~~d-~~p~~spDG~~I~f~Sdr~G~~qiy 329 (447)
..+-+|+|||+.||- .-.||..+||...--+....-. ...++-+ ++-+||+||+.++- |++.--+-
T Consensus 314 ~g~Rv~~tsC~~nrdg~~iAa-gc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlS---Rg~D~tLK 389 (641)
T KOG0772 314 GGKRVPVTSCAWNRDGKLIAA-GCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLS---RGFDDTLK 389 (641)
T ss_pred CCCCCCCEEEECCCCCCHHHH-CCCCCCEEEEECCCCCCCCCEEEEECCCCCCCEEEEEECCCCCHHHH---CCCCCCEE
T ss_conf 886357404402788652211-00477166653587431650686302378786127996466530332---36887324
Q ss_pred EEEECCCCCCEEEEECC---CCEEEEEECCCCCEEEEEEC--CC--CCEEEEEEECCCCC
Q ss_conf 76402567411122035---30000468776888999971--49--91579999889996
Q gi|254780548|r 330 VMQSNGSDQKRISQDKE---ASYFDPVWSPQGDLIAFTKF--SG--EKFAIGVMKKDGSQ 382 (447)
Q Consensus 330 ~~~~~g~~~~rlT~~~~---~~~~~p~wSPdG~~Iaf~~~--~~--~~~~i~~~~~~g~~ 382 (447)
+.++.--+.-..++.+- +...+-.||||.+.| ++.. .+ ..-.++.++..+=+
T Consensus 390 vWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli-~TGtS~~~~~~~g~L~f~d~~t~d 448 (641)
T KOG0772 390 VWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLI-LTGTSAPNGMTAGTLFFFDRMTLD 448 (641)
T ss_pred EEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEE-EECCCCCCCCCCCEEEEEECCCEE
T ss_conf 64232435322343178765778750217874279-834545688777547997414113
No 77
>KOG4497 consensus
Probab=98.62 E-value=9.3e-07 Score=62.28 Aligned_cols=105 Identities=13% Similarity=0.205 Sum_probs=52.5
Q ss_pred EEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEE
Q ss_conf 86217640234557689984899850346764430377117971799743798524445515895567741378730389
Q gi|254780548|r 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285 (447)
Q Consensus 206 l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~ 285 (447)
+-.+..++ .+-+|||||++|.-+|- - ..+|-+..+.+... -.+...+...-.-+|.|||+..+...-+|- .|-+
T Consensus 87 Ideg~agl-s~~~WSPdgrhiL~tse-F--~lriTVWSL~t~~~-~~~~~pK~~~kg~~f~~dg~f~ai~sRrDC-kdyv 160 (447)
T KOG4497 87 IDEGQAGL-SSISWSPDGRHILLTSE-F--DLRITVWSLNTQKG-YLLPHPKTNVKGYAFHPDGQFCAILSRRDC-KDYV 160 (447)
T ss_pred ECCCCCCC-EEEEECCCCCEEEEEEC-C--EEEEEEEEECCCEE-EEECCCCCCCEEEEECCCCCEEEEEECCCH-HHHH
T ss_conf 22688762-14667798654764201-2--05789998126606-771465557316898788745643210257-8788
Q ss_pred EEECCCCCCCCCCCCCCCC----CCEEEECCCCEEEE
Q ss_conf 9840477411002577643----20255216747899
Q gi|254780548|r 286 SVDLQSNATERLTNTLFIN----ISASYSPDSSQIVF 318 (447)
Q Consensus 286 ~~d~~~~~~~~lT~~~~~d----~~p~~spDG~~I~f 318 (447)
++...+.-+|..+...| +.-.|||||..|+-
T Consensus 161 --~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laV 195 (447)
T KOG4497 161 --QISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAV 195 (447)
T ss_pred --HHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEE
T ss_conf --87766789998752788623457348899968998
No 78
>KOG0286 consensus
Probab=98.62 E-value=5.2e-05 Score=50.61 Aligned_cols=203 Identities=20% Similarity=0.250 Sum_probs=108.7
Q ss_pred EEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEEC--CC--CCEEEEECCCCCEEEEEECCC
Q ss_conf 12311455402688621764023455768998489985034676443037711--79--717997437985244455158
Q gi|254780548|r 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR--ID--RAPKRIGNFRSMILAPRFSSN 268 (447)
Q Consensus 193 l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~--~g--~~~~~~~~~~~~~~~p~wSPD 268 (447)
|-|-|.--.|......-+...+++-++||.|+.||---. .+...||-...+ .| ...+.+..+.+..+.-.|-+|
T Consensus 79 lIVWDs~TtnK~hai~l~s~WVMtCA~sPSg~~VAcGGL--dN~Csiy~ls~~d~~~~~~v~r~l~gHtgylScC~f~dD 156 (343)
T KOG0286 79 LIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGL--DNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDD 156 (343)
T ss_pred EEEEECCCCCCEEEEECCCEEEEEEEECCCCCEEEECCC--CCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEECCC
T ss_conf 999975666402687347606899988898876882376--760489865664545521000220676514678887378
Q ss_pred CCEEEEEECCCCCEEEEEEECCCCCCCCCCC-CCCCCCCEEEEC-CCCEEEEEECC-CCCCCEEEEEECCCCCCEEEEEC
Q ss_conf 9556774137873038998404774110025-776432025521-67478997237-76533157640256741112203
Q gi|254780548|r 269 GKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSP-DSSQIVFESDR-EGKEQLYVMQSNGSDQKRISQDK 345 (447)
Q Consensus 269 G~~la~~~s~~g~~~I~~~d~~~~~~~~lT~-~~~~d~~p~~sp-DG~~I~f~Sdr-~G~~qiy~~~~~g~~~~rlT~~~ 345 (447)
+ +|+ +.+-|...-+| |+++|+..+.-. |.+.-.+-+.+| |++. |+|.- ... -++.|+..+...+ ||.+
T Consensus 157 ~-~il-T~SGD~TCalW--Die~g~~~~~f~GH~gDV~sl~l~p~~~nt--FiSg~cD~~--A~lWD~R~~~~~q-tF~g 227 (343)
T KOG0286 157 N-HIL-TGSGDMTCALW--DIETGQQTQVFHGHTGDVMSLSLSPSDGNT--FVSGGCDKS--AKLWDVRSGQCVQ-TFEG 227 (343)
T ss_pred C-CEE-ECCCCCEEEEE--ECCCCEEEEEECCCCCCEEEEECCCCCCCE--EEECCCCCC--EEEEECCCCCEEE-EECC
T ss_conf 7-369-54788369988--743263888743875437999527888873--696444541--3455326765267-6226
Q ss_pred -CCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECC-CC---CCCCEECCCCCEEEEEEEE
Q ss_conf -53000046877688899997149915799998899967996627-87---5543788789989999950
Q gi|254780548|r 346 -EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SN---LQAPTWSPSGRSLIFSRKK 410 (447)
Q Consensus 346 -~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~-~~---~e~P~wSPDG~~i~f~~~~ 410 (447)
+....+..+-|+|..++ +..+++.-++| |+....+-...+. .. ..+..||--|| ++|+...
T Consensus 228 hesDINsv~ffP~G~afa-tGSdD~tcRly--DlRaD~~~a~ys~~~~~~gvtSv~FS~SGR-lLfagy~ 293 (343)
T KOG0286 228 HESDINSVRFFPSGDAFA-TGSDDATCRLY--DLRADQELAVYSHDSIICGITSVAFSKSGR-LLFAGYD 293 (343)
T ss_pred CCCCCCEEEECCCCCCEE-ECCCCCEEEEE--EECCCCEEEEECCCCCCCCCEEEEECCCCC-EEEEEEC
T ss_conf 645540279726887046-33777306887--702782785542676557801687715661-8994204
No 79
>KOG2314 consensus
Probab=98.62 E-value=1.9e-05 Score=53.52 Aligned_cols=95 Identities=12% Similarity=0.145 Sum_probs=40.4
Q ss_pred EECCCCCEEEEEEECCCCCCCCCEEEECC-----CCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCC--EEEEEEECC
Q ss_conf 57689984899850346764430377117-----97179974379852444551589556774137873--038998404
Q gi|254780548|r 218 RFSPNQQKVAYATYDDEDILRVYLMDTRI-----DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQ 290 (447)
Q Consensus 218 ~wSpDG~~Iay~s~~~~~~~~i~~~~~~~-----g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~--~~I~~~d~~ 290 (447)
+||.|++.+|-+. .+. |-+++..+ ++.. ..+|+- .-+|||-+.-|||-.....+ ...-+|.+.
T Consensus 312 rWS~DdKy~Arm~---~~s--isIyEtpsf~lld~Ksl----ki~gIr-~FswsP~~~llAYwtpe~~~~parvtL~evP 381 (698)
T KOG2314 312 RWSHDDKYFARMT---GNS--ISIYETPSFMLLDKKSL----KISGIR-DFSWSPTSNLLAYWTPETNNIPARVTLMEVP 381 (698)
T ss_pred EECCCCCEEEEEC---CCE--EEEEECCCEEEECCCCC----CCCCCC-CCCCCCCCCEEEEECCCCCCCCCEEEEEECC
T ss_conf 8415871367750---665--79971475234036654----775434-7531787656899754456876157877557
Q ss_pred CCCCCCCCC-CCCCCCCEEEECCCCEEEEEECC
Q ss_conf 774110025-77643202552167478997237
Q gi|254780548|r 291 SNATERLTN-TLFINISASYSPDSSQIVFESDR 322 (447)
Q Consensus 291 ~~~~~~lT~-~~~~d~~p~~spDG~~I~f~Sdr 322 (447)
++..-|--+ ..-.|..-.|-..|++++|--||
T Consensus 382 s~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR 414 (698)
T KOG2314 382 SKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDR 414 (698)
T ss_pred CCCEEEECCCEEEECCEEEECCCCCEEEEEEEE
T ss_conf 555553025145302178740278589999874
No 80
>KOG0272 consensus
Probab=98.62 E-value=2.1e-06 Score=59.96 Aligned_cols=212 Identities=14% Similarity=0.162 Sum_probs=115.5
Q ss_pred EEEEEECCCCCEEEEEEECCCCCEEEEEECCC--CCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCC
Q ss_conf 00123114554026886217640234557689--9848998503467644303771179717997437985244455158
Q gi|254780548|r 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPN--QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268 (447)
Q Consensus 191 ~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpD--G~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPD 268 (447)
-++|-++ ++ |..+..+++..-+..-.|+|. +..+|=-++ .+...+|-++.. .....++.+..-....+|.|+
T Consensus 199 ~kvW~~~-~~-~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~--Dgtvklw~~~~e--~~l~~l~gH~~RVs~VafHPs 272 (459)
T KOG0272 199 VKVWSVP-QC-NLLQTLRGHTSRVGAAVFHPVDSDLNLATASA--DGTVKLWKLSQE--TPLQDLEGHLARVSRVAFHPS 272 (459)
T ss_pred EEEEECC-CC-CEEEEEECCCCCEEEEEECCCCCCCCEEEECC--CCCEEEECCCCC--CCHHHHHCCHHHHEEEEECCC
T ss_conf 3676248-86-42689825524132479712777661566416--775643216787--416654133342101366688
Q ss_pred CCEEEEEECCCCCEEEEEEECCCCCCCCCCCC-CCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCC
Q ss_conf 95567741378730389984047741100257-76432025521674789972377653315764025674111220353
Q gi|254780548|r 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347 (447)
Q Consensus 269 G~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~-~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~ 347 (447)
|+.|+ +.+.|-...|| |+.++..--+-.+ ..--.+-+|.|||.-++ +..-.--..|| |+.+|.-.-.-.+...
T Consensus 273 G~~L~-TasfD~tWRlW--D~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~-tGGlD~~~RvW--DlRtgr~im~L~gH~k 346 (459)
T KOG0272 273 GKFLG-TASFDSTWRLW--DLETKSELLLQEGHSKGVFSIAFQPDGSLAA-TGGLDSLGRVW--DLRTGRCIMFLAGHIK 346 (459)
T ss_pred CCEEE-ECCCCCCHHHC--CCCCCHHHHHHCCCCCCCCEEEECCCCCEEE-CCCCCCHHHEE--ECCCCCEEEEECCCCC
T ss_conf 76442-11355313030--0122236676425556531368637885565-26763101002--2156857998613564
Q ss_pred CEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEE-EE-ECCCCCCCCEECC-CCCEEEEEEEECCCCCEEEEE
Q ss_conf 0000468776888999971499157999988999679-96-6278755437887-899899999508987337999
Q gi|254780548|r 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LL-VEDSNLQAPTWSP-SGRSLIFSRKKDGDTGSKLYS 420 (447)
Q Consensus 348 ~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~-~l-t~~~~~e~P~wSP-DG~~i~f~~~~~g~~~~~l~~ 420 (447)
...+.+|||+|-.||-.+.++ ..+ +.|+...... ++ .+....-...++| -|++++-. ..++ ..+||.
T Consensus 347 ~I~~V~fsPNGy~lATgs~Dn-t~k--VWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~Ta-syD~--t~kiWs 416 (459)
T KOG0272 347 EILSVAFSPNGYHLATGSSDN-TCK--VWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTA-SYDN--TVKIWS 416 (459)
T ss_pred CEEEEEECCCCEEEEECCCCC-CEE--EEEECCCCCCEECCCCCCHHHHEEECCCCCEEEEEC-CCCC--CEEEEC
T ss_conf 025676778845874047887-078--866012540004233003043157644677389972-4676--046632
No 81
>KOG0263 consensus
Probab=98.59 E-value=4e-06 Score=58.03 Aligned_cols=150 Identities=15% Similarity=0.208 Sum_probs=65.6
Q ss_pred CCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEC-CCCCC
Q ss_conf 71799743798524445515895567741378730389984047741100257764320255216747899723-77653
Q gi|254780548|r 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-REGKE 326 (447)
Q Consensus 248 ~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sd-r~G~~ 326 (447)
...+.+..+.|....-+||||-+.| .+++.|+...||.++..+-.+.-= .+.+..-...|+|-| .+|.|- -.+..
T Consensus 442 ~~~~~L~GH~GPVyg~sFsPd~rfL-lScSED~svRLWsl~t~s~~V~y~-GH~~PVwdV~F~P~G--yYFatas~D~tA 517 (707)
T KOG0263 442 GTSRTLYGHSGPVYGCSFSPDRRFL-LSCSEDSSVRLWSLDTWSCLVIYK-GHLAPVWDVQFAPRG--YYFATASHDQTA 517 (707)
T ss_pred CEEEEEECCCCCEEEEEECCCCCEE-EEECCCCCEEEEECCCCEEEEEEC-CCCCCEEEEEECCCC--EEEEECCCCCEE
T ss_conf 6068753478864435546754524-750577625723235532689953-787642468877883--478843788415
Q ss_pred CEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECC--CCCCCCEECCCCCEE
Q ss_conf 315764025674111220353000046877688899997149915799998899967996627--875543788789989
Q gi|254780548|r 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSL 404 (447)
Q Consensus 327 qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~--~~~e~P~wSPDG~~i 404 (447)
.+|..+- ..+-|+-.+......--.+.|+..+++ +. .....+-+.|..+|...++-.| +..++-.+||+|+++
T Consensus 518 rLWs~d~--~~PlRifaghlsDV~cv~FHPNs~Y~a-TG--SsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~L 592 (707)
T KOG0263 518 RLWSTDH--NKPLRIFAGHLSDVDCVSFHPNSNYVA-TG--SSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYL 592 (707)
T ss_pred EEEECCC--CCCHHHHCCCCCCCCEEEECCCCCCCC-CC--CCCCEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEE
T ss_conf 5442256--772543014446766288779635102-57--887328988737785799762788866899975787567
Q ss_pred EE
Q ss_conf 99
Q gi|254780548|r 405 IF 406 (447)
Q Consensus 405 ~f 406 (447)
+=
T Consensus 593 aS 594 (707)
T KOG0263 593 AS 594 (707)
T ss_pred EE
T ss_conf 41
No 82
>KOG2315 consensus
Probab=98.58 E-value=2.6e-05 Score=52.66 Aligned_cols=220 Identities=15% Similarity=0.217 Sum_probs=114.0
Q ss_pred EEECCCCC--EEEEEEECCCCC-CCCCEEEECCCCCEEEEEC---CCCCEEEEEECCCCCEEEEEEC---------CCCC
Q ss_conf 55768998--489985034676-4430377117971799743---7985244455158955677413---------7873
Q gi|254780548|r 217 PRFSPNQQ--KVAYATYDDEDI-LRVYLMDTRIDRAPKRIGN---FRSMILAPRFSSNGKRALISVQ---------KDEA 281 (447)
Q Consensus 217 P~wSpDG~--~Iay~s~~~~~~-~~i~~~~~~~g~~~~~~~~---~~~~~~~p~wSPDG~~la~~~s---------~~g~ 281 (447)
-..||.+. .||.-.-+.++. ..+-++...-+.....++. |+..--.-.|.+-|..|++..+ .-|+
T Consensus 171 f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGE 250 (566)
T KOG2315 171 LSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGE 250 (566)
T ss_pred EEECCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCHHHHCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCCC
T ss_conf 88657899866899725778987479985066344564011101001433688742688569999998564778651033
Q ss_pred EEEEEEECCCCCC-CCCC-CCCCCCCCEEEECCCCEEEEEECCCCCC-CEEEEEECCCCCCEEEEECCCCEEEEEECCCC
Q ss_conf 0389984047741-1002-5776432025521674789972377653-31576402567411122035300004687768
Q gi|254780548|r 282 MDIYSVDLQSNAT-ERLT-NTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358 (447)
Q Consensus 282 ~~I~~~d~~~~~~-~~lT-~~~~~d~~p~~spDG~~I~f~Sdr~G~~-qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG 358 (447)
..||.++.+|-.. .+|+ .++- -...|+|+|+..+-+- |=.| -+=+.|++|.-+--+ -+|.. ...-|+|.|
T Consensus 251 q~Lyll~t~g~s~~V~L~k~GPV--hdv~W~~s~~EF~Vvy--GfMPAkvtifnlr~~~v~df-~egpR--N~~~fnp~g 323 (566)
T KOG2315 251 QTLYLLATQGESVSVPLLKEGPV--HDVTWSPSGREFAVVY--GFMPAKVTIFNLRGKPVFDF-PEGPR--NTAFFNPHG 323 (566)
T ss_pred CEEEEEEECCCEEEEECCCCCCC--EEEEECCCCCEEEEEE--ECCCCEEEEECCCCCEEEEC-CCCCC--CCEEECCCC
T ss_conf 06899971484689866777872--4789889898788997--03652278975888776767-98875--435777888
Q ss_pred CEEEEEECCCCCEEEEEEECCCCCEEEEEC-CCCCC-CCEECCCCCEEEEEEEEC---CCCCEEEEEEECCCCCEEECCC
Q ss_conf 889999714991579999889996799662-78755-437887899899999508---9873379999889971473367
Q gi|254780548|r 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQ-APTWSPSGRSLIFSRKKD---GDTGSKLYSIDLNGRNETLINT 433 (447)
Q Consensus 359 ~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~-~~~~e-~P~wSPDG~~i~f~~~~~---g~~~~~l~~~~~~G~~~~~~~~ 433 (447)
..|++....+-.-++-+.|... .++++. ...+- .-.|||||++++-+++.. -+++..||-++ |+....-..
T Consensus 324 ~ii~lAGFGNL~G~mEvwDv~n--~K~i~~~~a~~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt--G~~l~~~~f 399 (566)
T KOG2315 324 NIILLAGFGNLPGDMEVWDVPN--RKLIAKFKAANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT--GSLLHEKMF 399 (566)
T ss_pred CEEEEEECCCCCCCEEEEECCC--HHHCCCCCCCCCEEEEECCCCCEEEEEECCCCEEECCCEEEEEEC--CCEEEHHHH
T ss_conf 8899952588877468885146--322003334773388886998679997136527860876899840--845126561
Q ss_pred CCCCCCCCCCCCCC
Q ss_conf 88736753165579
Q gi|254780548|r 434 PAYASDPQWVGFMD 447 (447)
Q Consensus 434 ~g~~~~P~WsP~~~ 447 (447)
+.+..+-.|-|+.|
T Consensus 400 ~sEL~qv~W~P~~~ 413 (566)
T KOG2315 400 KSELLQVEWRPFND 413 (566)
T ss_pred HHHHHHEEEEECCC
T ss_conf 57685252243587
No 83
>KOG2055 consensus
Probab=98.57 E-value=4.4e-05 Score=51.09 Aligned_cols=184 Identities=17% Similarity=0.262 Sum_probs=110.9
Q ss_pred CCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCC-CEEEEEECCCCCEEEEEECCCCCEEEEEEE
Q ss_conf 7640234557689984899850346764430377117971799743798-524445515895567741378730389984
Q gi|254780548|r 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRALISVQKDEAMDIYSVD 288 (447)
Q Consensus 210 ~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~-~~~~p~wSPDG~~la~~~s~~g~~~I~~~d 288 (447)
...| .+-.|.|.- .++-+. .-++..+||-+|-.++...+.+ .+.. ......|+|+|+..+|++++. .-+|.+|
T Consensus 213 ~~~I-~sv~FHp~~-plllva-G~d~~lrifqvDGk~N~~lqS~-~l~~fPi~~a~f~p~G~~~i~~s~rr--ky~ysyD 286 (514)
T KOG2055 213 HGGI-TSVQFHPTA-PLLLVA-GLDGTLRIFQVDGKVNPKLQSI-HLEKFPIQKAEFAPNGHSVIFTSGRR--KYLYSYD 286 (514)
T ss_pred CCCC-EEEEECCCC-CEEEEE-CCCCCEEEEEECCCCCHHHEEE-EECCCCCCEEEECCCCCEEEEECCCC--EEEEEEE
T ss_conf 6881-489843898-369981-4787178999657357100345-52158401046648994689860551--3789851
Q ss_pred CCCCCCCCCCCCCCCCCCE-----EEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEE
Q ss_conf 0477411002577643202-----55216747899723776533157640256741112203530000468776888999
Q gi|254780548|r 289 LQSNATERLTNTLFINISA-----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363 (447)
Q Consensus 289 ~~~~~~~~lT~~~~~d~~p-----~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf 363 (447)
+.++++.+|-.-.+.+ ++ .-||||+.|++.- +.| .|+++.+.+++.- -++.-.+...+..||-||+.|.-
T Consensus 287 le~ak~~k~~~~~g~e-~~~~e~FeVShd~~fia~~G-~~G--~I~lLhakT~eli-~s~KieG~v~~~~fsSdsk~l~~ 361 (514)
T KOG2055 287 LETAKVTKLKPPYGVE-EKSMERFEVSHDSNFIAIAG-NNG--HIHLLHAKTKELI-TSFKIEGVVSDFTFSSDSKELLA 361 (514)
T ss_pred CCCCCCCCCCCCCCCC-CCHHHEEEECCCCCEEEECC-CCC--EEEEEHHHHHHHH-HEEEECCEEEEEEEECCCCEEEE
T ss_conf 0001111034787753-31100267437787699814-576--4772314444344-11345528766798058838999
Q ss_pred EECCCCCEEEEEEECCCCC-EEEEECCCCC--CCCEECCCCCEEEEE
Q ss_conf 9714991579999889996-7996627875--543788789989999
Q gi|254780548|r 364 TKFSGEKFAIGVMKKDGSQ-ERLLVEDSNL--QAPTWSPSGRSLIFS 407 (447)
Q Consensus 364 ~~~~~~~~~i~~~~~~g~~-~~~lt~~~~~--e~P~wSPDG~~i~f~ 407 (447)
+...+ ++|+.|+.... .++.++.+.. .+-.-|+||++++--
T Consensus 362 ~~~~G---eV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~G 405 (514)
T KOG2055 362 SGGTG---EVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATG 405 (514)
T ss_pred ECCCC---EEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEC
T ss_conf 86886---499996688605788764585440455205787648851
No 84
>pfam04762 IKI3 IKI3 family. Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation. This region contains WD40 like repeats.
Probab=98.57 E-value=7e-05 Score=49.76 Aligned_cols=84 Identities=14% Similarity=0.204 Sum_probs=41.9
Q ss_pred CEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCE-EEEECC--CCCEEEEEEC
Q ss_conf 1001231145540268862176402345576899848998503467644303771179717-997437--9852444551
Q gi|254780548|r 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNF--RSMILAPRFS 266 (447)
Q Consensus 190 ~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~-~~~~~~--~~~~~~p~wS 266 (447)
++.|.+-+.+|. .......-+.+-.+-+|-|.|+.||=+- +..+..+|-.+.-. |-+. +-...+ ......-.|+
T Consensus 232 rR~iRV~~ReG~-L~s~SE~v~gLe~~LsWrPsGnLIAs~Q-r~~~r~dVvFFERN-GLRHgeF~L~~~~~~~v~~L~Wn 308 (918)
T pfam04762 232 RRVIRVYSREGA-LDSVSEPVDGLEGALSWRPSGNLIASIQ-RLPDRLDVVFFERN-GLRHGEFTLRLPEDEKVISLEWN 308 (918)
T ss_pred EEEEEEECCCCE-EEECCCCCCCCCCCCCCCCCCCEEEEEE-ECCCCEEEEEEECC-CCCCCCEECCCCCCCEEEEEEEC
T ss_conf 049999898863-7852466677567653887787899987-54998169999128-85545145689988635774888
Q ss_pred CCCCEEEEEE
Q ss_conf 5895567741
Q gi|254780548|r 267 SNGKRALISV 276 (447)
Q Consensus 267 PDG~~la~~~ 276 (447)
+|+.-||+..
T Consensus 309 ~dS~iLAv~~ 318 (918)
T pfam04762 309 SDSEVLAVSL 318 (918)
T ss_pred CCCCEEEEEE
T ss_conf 9987789999
No 85
>pfam08450 SGL SMP-30/Gluconolaconase/LRE-like region. This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30), gluconolactonase and luciferin-regenerating enzyme (LRE). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 and LRE.
Probab=98.54 E-value=2.1e-05 Score=53.20 Aligned_cols=212 Identities=13% Similarity=0.151 Sum_probs=108.7
Q ss_pred CCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEE
Q ss_conf 41788751367644210012311455402688621764023455768998489985034676443037711797179974
Q gi|254780548|r 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254 (447)
Q Consensus 175 triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~ 254 (447)
.++.||- . ...+|+..+.++...+. ...... ...-.+.++|+-|+- + . ..+++.+..+++...+..
T Consensus 12 g~l~f~D-i-----~~~~i~~~~~~~~~~~~-~~~~~~-~~~~~~~~~g~li~~-~---~--~~i~~~~~~~~~~~~l~~ 77 (246)
T pfam08450 12 GALYWVD-I-----LGKRIHRLDPATGKETV-FDLPGP-VGAIALRDDGRLIVA-L---K--RGLALLDLDTGELTTLAD 77 (246)
T ss_pred CEEEEEE-C-----CCCEEEEEECCCCEEEE-EECCCC-EEEEEECCCCCEEEE-E---C--CCEEEEECCCCCEEEEEE
T ss_conf 9999998-9-----99999999899996999-989997-179998789919999-1---8--977999779996899983
Q ss_pred CCCCC---E--EEEEECCCCCEEEEEEC-CCC-----CEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCC
Q ss_conf 37985---2--44455158955677413-787-----3038998404774110025776432025521674789972377
Q gi|254780548|r 255 NFRSM---I--LAPRFSSNGKRALISVQ-KDE-----AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323 (447)
Q Consensus 255 ~~~~~---~--~~p~wSPDG~~la~~~s-~~g-----~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~ 323 (447)
...+. + -...+.|||. +.|+-. .+. ...||.++.++ +++++..+..+-....|||||+.++++ | +
T Consensus 78 ~~~~~~~~~~~ND~~vd~~G~-l~ftd~~~~~~~~~~~g~vy~~~~~g-~~~~~~~~~~~pNGi~~s~d~~~lyv~-d-s 153 (246)
T pfam08450 78 LEPDEWPLNRFNDGKVDPDGR-FWFGTMGFDIAPGGEPGALYRLDPDG-KVERVLDGVTISNGLAWSPDGKTLYFA-D-S 153 (246)
T ss_pred CCCCCCCCCCCCCEEECCCCC-EEEECCCCCCCCCCCCCEEEEEECCC-CEEEECCCCCCCCCEEECCCCCEEEEE-E-C
T ss_conf 468987658985789978999-99734455666788877899994999-999845544555743897899989997-1-8
Q ss_pred CCCCEEEEEE--CCCC--CCEEEEECCCCEE---EEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEC-CCCCCCC
Q ss_conf 6533157640--2567--4111220353000---04687768889999714991579999889996799662-7875543
Q gi|254780548|r 324 GKEQLYVMQS--NGSD--QKRISQDKEASYF---DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAP 395 (447)
Q Consensus 324 G~~qiy~~~~--~g~~--~~rlT~~~~~~~~---~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~-~~~~e~P 395 (447)
+...||++++ +++. .+++-........ ......+|.. |+..-+ ...|.+++++|.....+.- ....-+.
T Consensus 154 ~~~~i~~~~~~~~~g~~~~~~~f~~~~~~~g~pDGm~vD~~Gnl--~va~~g-~g~V~v~~p~G~~~~~I~~P~~~~tn~ 230 (246)
T pfam08450 154 PTRRIWAFDYDADGGLISNRRVFADFKDGDGEPDGMAVDAEGNL--WVARWG-GGKVVRFDPDGKLLGEIELPAKRPTSC 230 (246)
T ss_pred CCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCE--EEEEEC-CCEEEEECCCCCEEEEEECCCCCEEEE
T ss_conf 99879999803756876786899994887857675048179999--999937-999999979997999998999967898
Q ss_pred EEC-CCCCEEEEE
Q ss_conf 788-789989999
Q gi|254780548|r 396 TWS-PSGRSLIFS 407 (447)
Q Consensus 396 ~wS-PDG~~i~f~ 407 (447)
.|- ||++.|.-+
T Consensus 231 ~FGG~d~~~LfIT 243 (246)
T pfam08450 231 AFGGPDLRTLYVT 243 (246)
T ss_pred EECCCCCCEEEEE
T ss_conf 9827999999999
No 86
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=98.54 E-value=8.3e-05 Score=49.25 Aligned_cols=168 Identities=15% Similarity=0.168 Sum_probs=78.1
Q ss_pred CCEEEECCCCCEEEEEC-CCCCEE----EEEECCCCCEEEEEEC-----CCC---CEEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 30377117971799743-798524----4455158955677413-----787---3038998404774110025776432
Q gi|254780548|r 239 VYLMDTRIDRAPKRIGN-FRSMIL----APRFSSNGKRALISVQ-----KDE---AMDIYSVDLQSNATERLTNTLFINI 305 (447)
Q Consensus 239 i~~~~~~~g~~~~~~~~-~~~~~~----~p~wSPDG~~la~~~s-----~~g---~~~I~~~d~~~~~~~~lT~~~~~d~ 305 (447)
+++++..++...+.++. .++... .....|||.--+=++. ... ...||.++..++..+.+.++..+--
T Consensus 87 ~~~~~~~~~~~~t~~~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~N 166 (307)
T COG3386 87 VRLLDPDTGGKITLLAEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPN 166 (307)
T ss_pred CEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCEECCC
T ss_conf 66861147850589604667887678765118588999994997666677666775179998799978997048702157
Q ss_pred CEEEECCCCEEEEEECCCCCCCEEEEEECC---CCCC-EEEEECCCCEEEEEECCCCCEE-----EEEECCCCCEEEEEE
Q ss_conf 025521674789972377653315764025---6741-1122035300004687768889-----999714991579999
Q gi|254780548|r 306 SASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQK-RISQDKEASYFDPVWSPQGDLI-----AFTKFSGEKFAIGVM 376 (447)
Q Consensus 306 ~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g---~~~~-rlT~~~~~~~~~p~wSPdG~~I-----af~~~~~~~~~i~~~ 376 (447)
..+|||||+.++|+-. ....||+++.+- .... +.-..... . .=.|||-.+ +++....+...|.++
T Consensus 167 Gla~SpDg~tly~aDT--~~~~i~r~~~d~~~g~~~~~~~~~~~~~---~-~G~PDG~~vDadG~lw~~a~~~g~~v~~~ 240 (307)
T COG3386 167 GLAFSPDGKTLYVADT--PANRIHRYDLDPATGPIGGRRGFVDFDE---E-PGLPDGMAVDADGNLWVAAVWGGGRVVRF 240 (307)
T ss_pred CEEECCCCCEEEEECC--CCCEEEEEECCCCCCCCCCCCEEEECCC---C-CCCCCEEEEECCCCEEEECCCCCCEEEEE
T ss_conf 1379988997999738--8986999605755576578412797568---8-88997147817999899512688428999
Q ss_pred ECCCCCEEEEECC-CCCCCCEE-CCCCCEEEEEEEECC
Q ss_conf 8899967996627-87554378-878998999995089
Q gi|254780548|r 377 KKDGSQERLLVED-SNLQAPTW-SPSGRSLIFSRKKDG 412 (447)
Q Consensus 377 ~~~g~~~~~lt~~-~~~e~P~w-SPDG~~i~f~~~~~g 412 (447)
+++|.....+.-- .....|.| .||++.+.-++.+.+
T Consensus 241 ~pdG~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs~~~~ 278 (307)
T COG3386 241 NPDGKLLGEIKLPVKRPTNPAFGGPDLNTLYITSARSG 278 (307)
T ss_pred CCCCCEEEEEECCCCCCCCCEEECCCCCEEEEEECCCC
T ss_conf 99985846997898878715672787697999827768
No 87
>COG5616 Predicted integral membrane protein [Function unknown]
Probab=98.53 E-value=1.1e-06 Score=61.79 Aligned_cols=118 Identities=20% Similarity=0.292 Sum_probs=83.7
Q ss_pred EEEEECCCCCCCC------HHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCCCCCCCHH-HHHHCCCCEEEEEEEEECC
Q ss_conf 0046305677530------35789999998620175145508655034667611145778-8741562189999974046
Q gi|254780548|r 48 VSIAFTKFVSIDE------LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ-DWNSLGAQVLVTGRVIKEG 120 (447)
Q Consensus 48 i~IAv~~f~~~~~------~~~~i~~ii~~DL~~SG~F~~i~~~~~~~~~~~~~~~~~f~-~W~~~gad~lv~G~i~~~~ 120 (447)
-+|||.||.+.+. .+.-+++-|-.||.+.-.|.+|..++.-..... .++.+ .=+.+|+.||+.|++...+
T Consensus 25 psiAVlPF~nls~dp~q~~faDGlTEdiIt~Lsr~~~l~VIArnssft~kgk---a~dv~~v~~~Lgv~YvleGsvRr~g 101 (152)
T COG5616 25 PSIAVLPFVNLSGDPEQEYFADGLTEDIITDLSRFRELFVIARNSSFTYKGK---AVDVREVGEELGVRYVLEGSVRRAG 101 (152)
T ss_pred CCEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCEEECCCC---CCCHHHHHHHHCCCEEEEEEEEECC
T ss_conf 8479964035788876756505530889987665168569975650431688---8787898887388689960576328
Q ss_pred CCEEEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 6225789998415554200002323377788999999989999975044
Q gi|254780548|r 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169 (447)
Q Consensus 121 ~~~~~v~~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~ 169 (447)
++++|..+|.|..+|..|++.+|--...++=.+-..+...|+..|.|.
T Consensus 102 -~RvRvtaqLvda~~G~~LWAeryDr~l~diFa~QDevt~~iv~ai~~~ 149 (152)
T COG5616 102 -GRVRVTAQLVDASSGGHLWAERYDRDLDDIFALQDEVTERIVSAIAGP 149 (152)
T ss_pred -CEEEEEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf -879999999734688461577708457889998899999999874243
No 88
>KOG0275 consensus
Probab=98.51 E-value=2.8e-06 Score=59.08 Aligned_cols=56 Identities=21% Similarity=0.348 Sum_probs=35.0
Q ss_pred EEEEEECCCCCEEEEECCCCC----CCCEECCCCCEEEEEEEECCCCCEEEEEEEC-CCCCEEECC
Q ss_conf 799998899967996627875----5437887899899999508987337999988-997147336
Q gi|254780548|r 372 AIGVMKKDGSQERLLVEDSNL----QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN 432 (447)
Q Consensus 372 ~i~~~~~~g~~~~~lt~~~~~----e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~-~G~~~~~~~ 432 (447)
.+|+|+..|.-.|-.++|... -....||-|.+|+-. -.++ .+|-... .|+-++.++
T Consensus 416 tv~imn~qGQvVrsfsSGkREgGdFi~~~lSpkGewiYci-gED~----vlYCF~~~sG~LE~tl~ 476 (508)
T KOG0275 416 TVYIMNMQGQVVRSFSSGKREGGDFINAILSPKGEWIYCI-GEDG----VLYCFSVLSGKLERTLP 476 (508)
T ss_pred EEEEEECCCEEEEEECCCCCCCCCEEEEEECCCCCEEEEE-CCCC----EEEEEEEECCCEEEEEE
T ss_conf 4999963452776203677568855788844887489997-3685----79999961475026653
No 89
>KOG0315 consensus
Probab=98.50 E-value=0.00011 Score=48.48 Aligned_cols=212 Identities=16% Similarity=0.202 Sum_probs=124.2
Q ss_pred EEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCC---EEEEEECC
Q ss_conf 001231145540268862176402345576899848998503467644303771179717997437985---24445515
Q gi|254780548|r 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSS 267 (447)
Q Consensus 191 ~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~---~~~p~wSP 267 (447)
-++|-+- -|.--+.+- ..++-+..-..+||++.||-. + .+.|-++|+.++.. ..+..+.+. ..+..|.-
T Consensus 22 IRfWqa~-tG~C~rTiq-h~dsqVNrLeiTpdk~~LAaa----~-~qhvRlyD~~S~np-~Pv~t~e~h~kNVtaVgF~~ 93 (311)
T KOG0315 22 IRFWQAL-TGICSRTIQ-HPDSQVNRLEITPDKKDLAAA----G-NQHVRLYDLNSNNP-NPVATFEGHTKNVTAVGFQC 93 (311)
T ss_pred EEEEEHH-CCEEEEEEE-CCCCCEEEEEECCCCCHHHHC----C-CCEEEEEECCCCCC-CCEEEEECCCCCEEEEEEEE
T ss_conf 5532041-680888883-683332069976871245432----4-87069997468999-95368763678668999723
Q ss_pred CCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCC-CCCEEEEECC
Q ss_conf 895567741378730389984047741100257764320255216747899723776533157640256-7411122035
Q gi|254780548|r 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKRISQDKE 346 (447)
Q Consensus 268 DG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~-~~~rlT~~~~ 346 (447)
||+++ |+.+.||...||-+. .-..+|+-.+++...+....|+- .-.|++|++|+ |.+.|+... -.+.|..+..
T Consensus 94 dgrWM-yTgseDgt~kIWdlR--~~~~qR~~~~~spVn~vvlhpnQ-teLis~dqsg~--irvWDl~~~~c~~~liPe~~ 167 (311)
T KOG0315 94 DGRWM-YTGSEDGTVKIWDLR--SLSCQRNYQHNSPVNTVVLHPNQ-TELISGDQSGN--IRVWDLGENSCTHELIPEDD 167 (311)
T ss_pred CCEEE-EECCCCCEEEEEECC--CCCCCCCCCCCCCCCEEEECCCC-CEEEEECCCCC--EEEEECCCCCCCCCCCCCCC
T ss_conf 57698-854888348998624--70211001578974358746986-14886058787--89987167731220379878
Q ss_pred CCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCC----EEEEEC----CCCCCCCEECCCCCEEEEEEEECCCCCEEE
Q ss_conf 300004687768889999714991579999889996----799662----787554378878998999995089873379
Q gi|254780548|r 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ----ERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418 (447)
Q Consensus 347 ~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~----~~~lt~----~~~~e~P~wSPDG~~i~f~~~~~g~~~~~l 418 (447)
....+....|||++++-....| +.|+.++-+.. ...++. .++.-.=.+|||+|+|+-.+. ...-.+
T Consensus 168 ~~i~sl~v~~dgsml~a~nnkG---~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ss---dktv~i 241 (311)
T KOG0315 168 TSIQSLTVMPDGSMLAAANNKG---NCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSS---DKTVKI 241 (311)
T ss_pred CCEEEEEECCCCCEEEEECCCC---CEEEEECCCCCCCCCCEEHHHEECCCCEEEEEEECCCCCEEEEECC---CCEEEE
T ss_conf 5024689868987899870787---4899973687754341371104024662788998899727886058---856999
Q ss_pred EEEE
Q ss_conf 9998
Q gi|254780548|r 419 YSID 422 (447)
Q Consensus 419 ~~~~ 422 (447)
|..+
T Consensus 242 wn~~ 245 (311)
T KOG0315 242 WNTD 245 (311)
T ss_pred EECC
T ss_conf 8617
No 90
>pfam10647 Gmad1 Lipoprotein LpqB beta-propeller domain. The Gmad1 domain is found associated with the GerMN family, pfam10646, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=98.49 E-value=6.9e-05 Score=49.78 Aligned_cols=204 Identities=17% Similarity=0.212 Sum_probs=112.4
Q ss_pred CEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCC
Q ss_conf 02345576899848998503467644303771179717997437985244455158955677413787303899840477
Q gi|254780548|r 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292 (447)
Q Consensus 213 ~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~ 292 (447)
.+.+++-|+||+.+|+++- .+...+|+.... .....+...+. -..|+|.++| ++ ++...+.. ..-++....+
T Consensus 25 ~~~s~AvS~d~~~~AaV~~--~~~~~L~vg~~g--~~~~~~~~g~~-lt~PSwd~~g-~v-Wtv~~~~~-~~r~~~~~~g 96 (254)
T pfam10647 25 TVVSAAVSRDGQLVAAVAT--DDGSTLYVGPLG--GPATVVLTGRS-LTRPSWDLDG-WV-WTVGDGDT-VARLLRSATG 96 (254)
T ss_pred CCCEEEECCCCCEEEEEEC--CCCCEEEECCCC--CCCEEEECCCC-CCCCEECCCC-CE-EEEECCCC-EEEEEECCCC
T ss_conf 6312588888876999935--998689972689--87457772786-4687086999-88-99956997-0478987899
Q ss_pred CCCCC-CCCCCC----CCCEEEECCCCEEEEEECCCCCCCEEEEEE---CCCCCCEEEEEC------CCCEEEEEECCCC
Q ss_conf 41100-257764----320255216747899723776533157640---256741112203------5300004687768
Q gi|254780548|r 293 ATERL-TNTLFI----NISASYSPDSSQIVFESDREGKEQLYVMQS---NGSDQKRISQDK------EASYFDPVWSPQG 358 (447)
Q Consensus 293 ~~~~l-T~~~~~----d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~---~g~~~~rlT~~~------~~~~~~p~wSPdG 358 (447)
...+. .+.++. -++-.-|+||-+++.+..++|..|||+--+ ..+.+++++..- .....+..|..++
T Consensus 97 ~~~~~~Vd~~~l~~~~I~~lrvSrDG~R~A~vv~~~~~~~v~va~V~R~~~G~~~~l~~p~~~~~~~~~~v~~~~W~~~~ 176 (254)
T pfam10647 97 TTVPVEVDAPALSAGRITELRVSRDGTRAAVVVERGGGGQVYVAGVERDGGGLPRALTAPLRLAPGLGEPATSLAWRSDD 176 (254)
T ss_pred CEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCCCEEEEEEEEECCCCCEEEEECEEEECCCCCCCEEEEEECCCC
T ss_conf 61678963443489706899967888689999996899779999998479995467401058326778740165865899
Q ss_pred CEEEEEECCCCCEEEEEEECCCCCEEEEECCCCCCCCEE-CCCCCEEEEEEEECCCCCEEEEEEECCCCCEEEC
Q ss_conf 889999714991579999889996799662787554378-8789989999950898733799998899714733
Q gi|254780548|r 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431 (447)
Q Consensus 359 ~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~~~~e~P~w-SPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~~~ 431 (447)
..++..+..++.-. +.+..||+....+... +.-.|.- ..+....+|.++.++ ++....+|..=+.+
T Consensus 177 ~LvV~~~~~~~~v~-~~v~~DGs~~~~lps~-~~~~~v~av~~~~~~~~~t~~~g-----v~~l~~~g~~W~~v 243 (254)
T pfam10647 177 SLVVLGRAPGGPVQ-YEVSVDGSPSTQLPSG-NLGAPVIAVAASPSTVYVTDDGA-----LLQLSRSGQGWREV 243 (254)
T ss_pred EEEEEECCCCCCEE-EEEECCCCCCCCCCCC-CCCCCEEEECCCCCEEEEECCCC-----EEEECCCCCCCEEC
T ss_conf 89998358999267-8995278667667877-76566688517984389984896-----69948999975697
No 91
>KOG2314 consensus
Probab=98.47 E-value=3.9e-05 Score=51.42 Aligned_cols=189 Identities=17% Similarity=0.290 Sum_probs=88.4
Q ss_pred EECCCCCEEEEEEECCCCC-CCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCC---------CCEEEEEE
Q ss_conf 5768998489985034676-4430377117971799743798524445515895567741378---------73038998
Q gi|254780548|r 218 RFSPNQQKVAYATYDDEDI-LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD---------EAMDIYSV 287 (447)
Q Consensus 218 ~wSpDG~~Iay~s~~~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~---------g~~~I~~~ 287 (447)
.|||-++-|||=+-+..+. .++-+..+.++++.+..--+.-.+-.--|--.|+.|+|-..+. .|-+|+.+
T Consensus 353 swsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfri 432 (698)
T KOG2314 353 SWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRI 432 (698)
T ss_pred CCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEECCCEEEECCEEEECCCCCEEEEEEEEECCCCCCCEEEEEEEEEE
T ss_conf 31787656899754456876157877557555553025145302178740278589999874035555535766899996
Q ss_pred ECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECC--CCCCCEEEEEECCCCCCEEE-EECCCCEEEEEECCCCCEEEEE
Q ss_conf 40477411002577643202552167478997237--76533157640256741112-2035300004687768889999
Q gi|254780548|r 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDR--EGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFT 364 (447)
Q Consensus 288 d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr--~G~~qiy~~~~~g~~~~rlT-~~~~~~~~~p~wSPdG~~Iaf~ 364 (447)
+-..-.+..+- -...-..=.|-|.|++.+-.|.. .-+++.|.+...++.++.+. ++. ....+..|||.|++++..
T Consensus 433 reKdIpve~ve-lke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk-~~~N~vfwsPkG~fvvva 510 (698)
T KOG2314 433 REKDIPVEVVE-LKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDK-KFANTVFWSPKGRFVVVA 510 (698)
T ss_pred ECCCCCCEEEE-CCHHEEEEEECCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHCC-CCCCEEEECCCCCEEEEE
T ss_conf 04578725664-2001256202368974899974356664248876247886256623021-003347884888679999
Q ss_pred ECCCCCEEEEEEECCCCCEEEEECC--CCCCCCEECCCCCEEEEEE
Q ss_conf 7149915799998899967996627--8755437887899899999
Q gi|254780548|r 365 KFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSR 408 (447)
Q Consensus 365 ~~~~~~~~i~~~~~~g~~~~~lt~~--~~~e~P~wSPDG~~i~f~~ 408 (447)
...+.+.+++-+|.+-...++...- .....-.|-|-||+++-.+
T Consensus 511 ~l~s~~g~l~F~D~~~a~~k~~~~~eh~~at~veWDPtGRYvvT~s 556 (698)
T KOG2314 511 ALVSRRGDLEFYDTDYADLKDTASPEHFAATEVEWDPTGRYVVTSS 556 (698)
T ss_pred EECCCCCCEEEEECCHHHHHHCCCCCCCCCCCCEECCCCCEEEEEE
T ss_conf 7304566259985651663121674322234426889877899754
No 92
>KOG2096 consensus
Probab=98.47 E-value=1.6e-05 Score=54.02 Aligned_cols=162 Identities=19% Similarity=0.258 Sum_probs=91.4
Q ss_pred CCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEE----CCC--CCCCC---CCCCCCCCCCE
Q ss_conf 4430377117971799743798524445515895567741378730389984----047--74110---02577643202
Q gi|254780548|r 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD----LQS--NATER---LTNTLFINISA 307 (447)
Q Consensus 237 ~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d----~~~--~~~~~---lT~~~~~d~~p 307 (447)
..|-++++. |+....+......+...+.||||+.||.+. =.+|+.+.. -+| .++.| |-.+.+..+..
T Consensus 209 t~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~g---FTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~ 284 (420)
T KOG2096 209 TKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVSG---FTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAA 284 (420)
T ss_pred CCEEEEECC-CCEEEEECCCCCCCCCEEECCCCCEEEEEC---CCCCCEEEEEEECCCCCHHHHHHHHEECCCHHHEEEE
T ss_conf 858999567-753202033223464313579984798732---7887368987765676065323132014624540223
Q ss_pred EEECCCCEEEEEECCCCCCCEEEEEEC---CCCCCEEEEE------CCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEC
Q ss_conf 552167478997237765331576402---5674111220------3530000468776888999971499157999988
Q gi|254780548|r 308 SYSPDSSQIVFESDREGKEQLYVMQSN---GSDQKRISQD------KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378 (447)
Q Consensus 308 ~~spDG~~I~f~Sdr~G~~qiy~~~~~---g~~~~rlT~~------~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~ 378 (447)
+|||+.++++-+| +.|...||-.|+. +-.++-|-.+ ...+-.....||.|+.+|.+... .|-++..
T Consensus 285 aFsn~S~r~vtvS-kDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs----~l~~~~s 359 (420)
T KOG2096 285 AFSNSSTRAVTVS-KDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGS----DLKVFAS 359 (420)
T ss_pred EECCCCCEEEEEE-CCCCEEEEECCCEEECCCCCHHHHCCCCCHHHCCCCCEEEEECCCCCEEEEECCC----CEEEEEC
T ss_conf 2179861458970-4882798523213733799457642774032147984478867887677754288----0589973
Q ss_pred CCCCE-EEEEC--CCCCCCCEECCCCCEEEEE
Q ss_conf 99967-99662--7875543788789989999
Q gi|254780548|r 379 DGSQE-RLLVE--DSNLQAPTWSPSGRSLIFS 407 (447)
Q Consensus 379 ~g~~~-~~lt~--~~~~e~P~wSPDG~~i~f~ 407 (447)
+.++. .-+.. +....+-+|+|||++|+-.
T Consensus 360 e~g~~~~~~e~~h~~~Is~is~~~~g~~~atc 391 (420)
T KOG2096 360 EDGKDYPELEDIHSTTISSISYSSDGKYIATC 391 (420)
T ss_pred CCCCCCHHHHHHHCCCEEEEEECCCCCEEEEE
T ss_conf 66764256877613734257864888677652
No 93
>KOG2096 consensus
Probab=98.46 E-value=7.8e-06 Score=56.13 Aligned_cols=134 Identities=24% Similarity=0.295 Sum_probs=67.1
Q ss_pred CCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEE----CC--CCCCEE
Q ss_conf 895567741378730389984047741100257764320255216747899723776533157640----25--674111
Q gi|254780548|r 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS----NG--SDQKRI 341 (447)
Q Consensus 268 DG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~----~g--~~~~rl 341 (447)
|+.+.+.+.+.+. +|.+.++.|..+.-+-.+...+...+.||||+.|+- + +=.|.+.+... +| .++.|+
T Consensus 197 ~~~k~imsas~dt--~i~lw~lkGq~L~~idtnq~~n~~aavSP~GRFia~-~--gFTpDVkVwE~~f~kdG~fqev~rv 271 (420)
T KOG2096 197 GNAKYIMSASLDT--KICLWDLKGQLLQSIDTNQSSNYDAAVSPDGRFIAV-S--GFTPDVKVWEPIFTKDGTFQEVKRV 271 (420)
T ss_pred CCCEEEEEECCCC--CEEEEECCCCEEEEECCCCCCCCCEEECCCCCEEEE-E--CCCCCCEEEEEEECCCCCHHHHHHH
T ss_conf 8836999813898--589995677532020332234643135799847987-3--2788736898776567606532313
Q ss_pred E-E-ECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECC---CCCEEEEECCC--CCC---CC---EECCCCCEEEEE
Q ss_conf 2-2-035300004687768889999714991579999889---99679966278--755---43---788789989999
Q gi|254780548|r 342 S-Q-DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD---GSQERLLVEDS--NLQ---AP---TWSPSGRSLIFS 407 (447)
Q Consensus 342 T-~-~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~---g~~~~~lt~~~--~~e---~P---~wSPDG~~i~f~ 407 (447)
- . +........++||+.++++-.+.++ .+.|+-.|.. +.....|-.+. ... .| +.||+|+.++-+
T Consensus 272 f~LkGH~saV~~~aFsn~S~r~vtvSkDG-~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s 349 (420)
T KOG2096 272 FSLKGHQSAVLAAAFSNSSTRAVTVSKDG-KWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVS 349 (420)
T ss_pred HEECCCHHHEEEEEECCCCCEEEEEECCC-CEEEEECCCEEECCCCCHHHHCCCCCHHHCCCCCEEEEECCCCCEEEEE
T ss_conf 20146245402232179861458970488-2798523213733799457642774032147984478867887677754
No 94
>KOG1407 consensus
Probab=98.46 E-value=0.00013 Score=47.92 Aligned_cols=214 Identities=14% Similarity=0.157 Sum_probs=118.3
Q ss_pred EEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCC
Q ss_conf 34557689984899850346764430377117971799743798524445515895567741378730389984047741
Q gi|254780548|r 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294 (447)
Q Consensus 215 ~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~ 294 (447)
---.|.|-..-+.++.+. ++ .|-+.|.++++-...+ ...+.|.--.|||||+++++....| .|-.+|..+.+.
T Consensus 68 dql~w~~~~~d~~atas~-dk--~ir~wd~r~~k~~~~i-~~~~eni~i~wsp~g~~~~~~~kdD---~it~id~r~~~~ 140 (313)
T KOG1407 68 DQLCWDPKHPDLFATASG-DK--TIRIWDIRSGKCTARI-ETKGENINITWSPDGEYIAVGNKDD---RITFIDARTYKI 140 (313)
T ss_pred HHHEECCCCCCCEEEECC-CC--EEEEEEECCCCEEEEE-ECCCCCEEEEECCCCCEEEEECCCC---CEEEEEECCCCE
T ss_conf 442018999760578418-95--2999981148578886-3367506999869998799854766---079997001423
Q ss_pred CCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEE
Q ss_conf 10025776432025521674789972377653315764025674111220353000046877688899997149915799
Q gi|254780548|r 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374 (447)
Q Consensus 295 ~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~ 374 (447)
..--..+--..+-+|.-++. +.|.-+-.|.-+|-... .=..+.-|.. ...+-.--.++|+|+++|.-+-+ ..+-
T Consensus 141 ~~~~~~~~e~ne~~w~~~nd-~Fflt~GlG~v~ILsyp-sLkpv~si~A-H~snCicI~f~p~GryfA~GsAD---AlvS 214 (313)
T KOG1407 141 VNEEQFKFEVNEISWNNSND-LFFLTNGLGCVEILSYP-SLKPVQSIKA-HPSNCICIEFDPDGRYFATGSAD---ALVS 214 (313)
T ss_pred EEHHCCCCEEEEEEECCCCC-EEEEECCCCEEEEEECC-CCCCCCCCCC-CCCCEEEEEECCCCCEEEECCCC---CEEE
T ss_conf 00101530302456417887-79994488658997336-5561120125-77653999977998667414543---0365
Q ss_pred EEECCCC-CEEEEEC-CCCCCCCEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 9988999-6799662-787554378878998999995089873379999889971473367887367531655
Q gi|254780548|r 375 VMKKDGS-QERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445 (447)
Q Consensus 375 ~~~~~g~-~~~~lt~-~~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~~~~~~g~~~~P~WsP~ 445 (447)
+.|++-- =+|.++. +.....-+||-||++|+-.++. ....|.-+ -+|.+...++..+.-..-+|.|-
T Consensus 215 LWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSED---h~IDIA~v-etGd~~~eI~~~~~t~tVAWHPk 283 (313)
T KOG1407 215 LWDVDELICERCISRLDWPVRTLSFSHDGRMLASASED---HFIDIAEV-ETGDRVWEIPCEGPTFTVAWHPK 283 (313)
T ss_pred CCCHHHHHHHEEECCCCCCEEEEEECCCCCEEECCCCC---CEEEEEEC-CCCCEEEEEECCCCCEEEEECCC
T ss_conf 05726754332310136734788752385323025765---06886744-56885787322687425776688
No 95
>KOG0293 consensus
Probab=98.45 E-value=3.3e-06 Score=58.62 Aligned_cols=171 Identities=11% Similarity=0.095 Sum_probs=101.3
Q ss_pred EEEEEECCCCCE--EEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECC-CCCEEEEEECC
Q ss_conf 001231145540--268862176402345576899848998503467644303771179717997437-98524445515
Q gi|254780548|r 191 NSLCVMDRDGAN--IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF-RSMILAPRFSS 267 (447)
Q Consensus 191 ~~l~i~d~DG~n--~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~-~~~~~~p~wSP 267 (447)
.-||..++|+.- .+++.....+ +..-.||||.+.++--.++ ..+++.|..+|.......+. .-.+.+-+|-|
T Consensus 248 aiiw~v~~d~~~kl~~tlvgh~~~-V~yi~wSPDdryLlaCg~~----e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~p 322 (519)
T KOG0293 248 AIIWIVVYDVHFKLKKTLVGHSQP-VSYIMWSPDDRYLLACGFD----EVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCP 322 (519)
T ss_pred EEEEEEECCCCEEEEEEEECCCCC-EEEEEECCCCCEEEECCCH----HHEEECCCCCCHHHHHCCCCCCCCCCEEEECC
T ss_conf 799999437612565544024573-5899987987727735815----72352457754031123567678742368736
Q ss_pred CCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCC----CCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEE
Q ss_conf 8955677413787303899840477411002577643----202552167478997237765331576402567411122
Q gi|254780548|r 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN----ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343 (447)
Q Consensus 268 DG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d----~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~ 343 (447)
||.+++.- +.| ..|+..+++|..... ..+.. ..-+.++||++++-+- -.+.|..++......+.+-.
T Consensus 323 Dg~~~V~G-s~d--r~i~~wdlDgn~~~~---W~gvr~~~v~dlait~Dgk~vl~v~---~d~~i~l~~~e~~~dr~lis 393 (519)
T KOG0293 323 DGFRFVTG-SPD--RTIIMWDLDGNILGN---WEGVRDPKVHDLAITYDGKYVLLVT---VDKKIRLYNREARVDRGLIS 393 (519)
T ss_pred CCCEEEEC-CCC--CCEEEECCCCCHHHC---CCCCCCCEEEEEEECCCCCEEEEEE---CCCCEEEECHHHHHHHCCCC
T ss_conf 87436844-898--747996478424313---3543355268889747995899996---16525431345643430012
Q ss_pred ECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECC
Q ss_conf 035300004687768889999714991579999889
Q gi|254780548|r 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379 (447)
Q Consensus 344 ~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~ 379 (447)
+.. ...+...|-||+.+. ++..... |.+.|++
T Consensus 394 e~~-~its~~iS~d~k~~L-vnL~~qe--i~LWDl~ 425 (519)
T KOG0293 394 EEQ-PITSFSISKDGKLAL-VNLQDQE--IHLWDLE 425 (519)
T ss_pred CCC-CEEEEEECCCCCEEE-EECCCCE--EEEEECC
T ss_conf 358-636899748970899-9825670--6775231
No 96
>KOG0305 consensus
Probab=98.44 E-value=1.7e-05 Score=53.90 Aligned_cols=213 Identities=15% Similarity=0.205 Sum_probs=107.4
Q ss_pred EECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCC-CCC
Q ss_conf 576899848998503467644303771179717997437-985244455158955677413787303899840477-411
Q gi|254780548|r 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF-RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATE 295 (447)
Q Consensus 218 ~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~-~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~-~~~ 295 (447)
.||.. +.+| ++. ...+|+.+..++.. ..+.++ .....+..|+|||+.||+- ..+|..+|| |.... ..+
T Consensus 184 dWss~-n~la-Val----g~~vylW~~~s~~v-~~l~~~~~~~vtSv~ws~~G~~LavG-~~~g~v~iw--D~~~~k~~~ 253 (484)
T KOG0305 184 DWSSA-NVLA-VAL----GQSVYLWSASSGSV-TELCSFGEELVTSVKWSPDGSHLAVG-TSDGTVQIW--DVKEQKKTR 253 (484)
T ss_pred HCCCC-CEEE-EEE----CCEEEEEECCCCCE-EEEEECCCCCEEEEEECCCCCEEEEE-ECCCEEEEE--EHHHCCCCC
T ss_conf 30347-7389-984----23678870678865-78665488855788987899879896-069759997--535524663
Q ss_pred CCCC-CCC-----------------------------------------CCCCEEEECCCCEEEEEECCCCC-CCEEEEE
Q ss_conf 0025-776-----------------------------------------43202552167478997237765-3315764
Q gi|254780548|r 296 RLTN-TLF-----------------------------------------INISASYSPDSSQIVFESDREGK-EQLYVMQ 332 (447)
Q Consensus 296 ~lT~-~~~-----------------------------------------~d~~p~~spDG~~I~f~Sdr~G~-~qiy~~~ 332 (447)
.+.. +.+ -...-.|++||++++ | +|+ ..+++.|
T Consensus 254 ~~~~~h~~rvg~laW~~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lA--S--GgnDN~~~Iwd 329 (484)
T KOG0305 254 TLRGSHASRVGSLAWNSSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLA--S--GGNDNVVFIWD 329 (484)
T ss_pred CCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCHHHHHHHHCCCCEEEEEEECCCCCEEC--C--CCCCCCEEECC
T ss_conf 1467767516898626745787137776799887340665556523131156658878788434--6--78865148616
Q ss_pred ECCCCCC-EEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEE-EEECCCCCCCCEECCCCCEEEEEEEE
Q ss_conf 0256741-112203530000468776888999971499157999988999679-96627875543788789989999950
Q gi|254780548|r 333 SNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKK 410 (447)
Q Consensus 333 ~~g~~~~-rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~-~lt~~~~~e~P~wSPDG~~i~f~~~~ 410 (447)
....++. +++ +....+-..+|+|=-.-|+-+........|...|..++... .+..+...-+-.|||..+.|+.+.-.
T Consensus 330 ~~~~~p~~~~~-~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~ 408 (484)
T KOG0305 330 GLSPEPKFTFT-EHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGY 408 (484)
T ss_pred CCCCCCCEEEE-CCCEEEEEEEECCCCCCCEEECCCCCCCEEEEEECCCCCEECCCCCCCCEEEEEECCCCCEEEEECCC
T ss_conf 88866768882-13200667764787668067748876627999875788275443368856557985778878873077
Q ss_pred CCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 898733799998899714733678873675316557
Q gi|254780548|r 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446 (447)
Q Consensus 411 ~g~~~~~l~~~~~~G~~~~~~~~~g~~~~P~WsP~~ 446 (447)
. ...-.||.+..--....+..+...+..-+|||.-
T Consensus 409 s-~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg 443 (484)
T KOG0305 409 S-ENQITLWKYPSMKLVAELLGHTSRVLYLALSPDG 443 (484)
T ss_pred C-CCCEEEEECCCCCEEEEECCCCCEEEEEEECCCC
T ss_conf 8-8838999656644110002776516998888898
No 97
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.44 E-value=3.9e-05 Score=51.43 Aligned_cols=138 Identities=12% Similarity=0.183 Sum_probs=63.5
Q ss_pred EEEECCCCCEEEEEE---ECCCCC----CCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEE-CCCCCEEEEEE
Q ss_conf 455768998489985---034676----4430377117971799743798524445515895567741-37873038998
Q gi|254780548|r 216 EPRFSPNQQKVAYAT---YDDEDI----LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-QKDEAMDIYSV 287 (447)
Q Consensus 216 sP~wSpDG~~Iay~s---~~~~~~----~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~-s~~g~~~I~~~ 287 (447)
.-.|-+.|+.+.+.. +..++. ..+|++++. +...+......+....-.|+|++++.+... .... -+-..
T Consensus 227 qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~-e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa--~~s~~ 303 (561)
T COG5354 227 QLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRIT-ERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPA--SVSVF 303 (561)
T ss_pred EEEEECCCCEEEEEEEEEEECCCCEECCCEEEEEEEC-CCCCCEECCCCCCCEEEEECCCCCCEEEEECCCCC--CEEEC
T ss_conf 8998237866999998754036623324347998511-46532021566651145544568844688525631--03321
Q ss_pred ECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEE--CCCCCCCEEEEEECCCCCCEE-EEECCCCEEEEEECCCCCEEE
Q ss_conf 404774110025776432025521674789972--377653315764025674111-220353000046877688899
Q gi|254780548|r 288 DLQSNATERLTNTLFINISASYSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIA 362 (447)
Q Consensus 288 d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~S--dr~G~~qiy~~~~~g~~~~rl-T~~~~~~~~~p~wSPdG~~Ia 362 (447)
|+.+.-.--+.... .-.+.|||.+++|+|.- +-.|+ |-+++..|.-. .+ ++.+. +..--.|||||+.+.
T Consensus 304 ~lr~Nl~~~~Pe~~--rNT~~fsp~~r~il~agF~nl~gn--i~i~~~~~rf~-~~~~~~~~-n~s~~~wspd~qF~~ 375 (561)
T COG5354 304 DLRGNLRFYFPEQK--RNTIFFSPHERYILFAGFDNLQGN--IEIFDPAGRFK-VAGAFNGL-NTSYCDWSPDGQFYD 375 (561)
T ss_pred CCCCCEEEECCCCC--CCCCCCCCCCCEEEEECCCCCCCC--EEEECCCCCEE-EEEEEECC-CCEEEECCCCCEEEE
T ss_conf 45654689558766--564012676448999537865353--58862677658-99986137-734740269861798
No 98
>KOG0265 consensus
Probab=98.42 E-value=0.00013 Score=48.01 Aligned_cols=248 Identities=14% Similarity=0.164 Sum_probs=134.8
Q ss_pred HHHHHCCCCCCCCCCEEEEE-----ECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCC
Q ss_conf 99975044555544178875-----1367644210012311455402688621764023455768998489985034676
Q gi|254780548|r 162 IYQSITGEKGDFNSRILFVS-----ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236 (447)
Q Consensus 162 i~~~ltG~~G~f~triafv~-----~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~ 236 (447)
-.+.|-|.+|.-.+ +.|-- .+++.+.. -=||-.+-|=.|.-.+. +...-++--.|.+||+.|.-.+ ..
T Consensus 39 p~m~l~gh~geI~~-~~F~P~gs~~aSgG~Dr~-I~LWnv~gdceN~~~lk-gHsgAVM~l~~~~d~s~i~S~g----tD 111 (338)
T KOG0265 39 PIMLLPGHKGEIYT-IKFHPDGSCFASGGSDRA-IVLWNVYGDCENFWVLK-GHSGAVMELHGMRDGSHILSCG----TD 111 (338)
T ss_pred HHHHCCCCCCEEEE-EEECCCCCEEEECCCCCE-EEEEECCCCCCCEEEEC-CCCCEEEEEEECCCCCEEEEEC----CC
T ss_conf 24323798646899-998899976852577506-99996156511102323-6641267625636898899834----89
Q ss_pred CCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEE
Q ss_conf 44303771179717997437985244455158955677413787303899840477411002577643202552167478
Q gi|254780548|r 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316 (447)
Q Consensus 237 ~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I 316 (447)
..++.+|.++|+..+....+.+...+-.-+--|-.++.+.+.|+...|| |...+..-++-..+.--++-.|.-+++++
T Consensus 112 ktv~~wD~~tG~~~rk~k~h~~~vNs~~p~r~g~~lv~SgsdD~t~kl~--D~R~k~~~~t~~~kyqltAv~f~d~s~qv 189 (338)
T KOG0265 112 KTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLW--DIRKKEAIKTFENKYQLTAVGFKDTSDQV 189 (338)
T ss_pred CEEEEEECCCCEEEEHHCCCCCEEEECCCCCCCCEEEEECCCCCEEEEE--EECCCCHHHCCCCCEEEEEEEECCCCCCE
T ss_conf 6589876212500102015546255138302697678852888608998--60111101055664068999863565303
Q ss_pred EEEECCCCC-CCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEE--EEECCCC--
Q ss_conf 997237765-33157640256741112203530000468776888999971499157999988999679--9662787--
Q gi|254780548|r 317 VFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSN-- 391 (447)
Q Consensus 317 ~f~Sdr~G~-~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~--~lt~~~~-- 391 (447)
. . +|- .+|-+.++.-.+..-++.+..........||+|..+.--+++. ...++-+.+--...| .+..+..
T Consensus 190 ~-s---ggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~-tvrvwdvrp~~p~~R~v~if~g~~hn 264 (338)
T KOG0265 190 I-S---GGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDN-TVRVWDVRPFAPSQRCVKIFQGHIHN 264 (338)
T ss_pred E-E---CCCCCCEEEECCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCC-EEEEEEECCCCCCCCEEEEEECCHHH
T ss_conf 6-5---13457505512566860588306667414677646888343200045-47888701367777158986231022
Q ss_pred CC----CCEECCCCCEEEEEEEECCCCCEEEEEEECCCCCE
Q ss_conf 55----43788789989999950898733799998899714
Q gi|254780548|r 392 LQ----APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428 (447)
Q Consensus 392 ~e----~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~ 428 (447)
-| .-+||||++.|.+-+.. ..+|+-|..++..
T Consensus 265 feknlL~cswsp~~~~i~ags~d-----r~vyvwd~~~r~~ 300 (338)
T KOG0265 265 FEKNLLKCSWSPNGTKITAGSAD-----RFVYVWDTTSRRI 300 (338)
T ss_pred HHHHCCEEECCCCCCCCCCCCCC-----CEEEEEECCCCCE
T ss_conf 32110165036898722001133-----1189964366327
No 99
>KOG2394 consensus
Probab=98.42 E-value=4e-05 Score=51.35 Aligned_cols=51 Identities=24% Similarity=0.336 Sum_probs=28.8
Q ss_pred EECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCC-CCCCCEEEECCCCEEE
Q ss_conf 55158955677413787303899840477411002577-6432025521674789
Q gi|254780548|r 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIV 317 (447)
Q Consensus 264 ~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~-~~d~~p~~spDG~~I~ 317 (447)
.|||||+.||.+ ++||...||-++ +-++.-+..+. +--.-.+|||||+.|+
T Consensus 297 ~FS~DG~~LA~V-SqDGfLRvF~fd--t~eLlg~mkSYFGGLLCvcWSPDGKyIv 348 (636)
T KOG2394 297 AFSPDGKYLATV-SQDGFLRIFDFD--TQELLGVMKSYFGGLLCVCWSPDGKYIV 348 (636)
T ss_pred EECCCCCEEEEE-ECCCEEEEEECC--HHHHHHHHHHHCCCEEEEEECCCCCEEE
T ss_conf 676888668997-147668986333--7988777886506237999768863787
No 100
>KOG0275 consensus
Probab=98.41 E-value=1.5e-05 Score=54.27 Aligned_cols=239 Identities=19% Similarity=0.304 Sum_probs=121.3
Q ss_pred CCCCEEEEEEEEECCCCEEEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE----
Q ss_conf 5621899999740466225789998415554200002323377788999999989999975044555544178875----
Q gi|254780548|r 106 LGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS---- 181 (447)
Q Consensus 106 ~gad~lv~G~i~~~~~~~~~v~~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~f~triafv~---- 181 (447)
...+|||.|++ +|.+ ++||-.+||.--..+|....+- +. .|+-+.. |-|-.
T Consensus 223 PDgqyLvsgSv----DGFi----EVWny~~GKlrKDLkYQAqd~f---MM---md~aVlc-----------i~FSRDsEM 277 (508)
T KOG0275 223 PDGQYLVSGSV----DGFI----EVWNYTTGKLRKDLKYQAQDNF---MM---MDDAVLC-----------ISFSRDSEM 277 (508)
T ss_pred CCCCEEEECCC----CCEE----EEEHHCCCHHHHHHHHHHHCCE---EE---CCCCEEE-----------EEECCCHHH
T ss_conf 98756863155----5425----5301225313323232101030---20---2462589-----------861464777
Q ss_pred -ECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCE
Q ss_conf -1367644210012311455402688621764023455768998489985034676443037711797179974379852
Q gi|254780548|r 182 -ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260 (447)
Q Consensus 182 -~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~ 260 (447)
.++ .....-.+|-.. .|.-.|..-+....-+-.-+||.|+..|.-.||+ .-+-+..+.+|+. +..++|..
T Consensus 278 lAsG-sqDGkIKvWri~-tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD----~tvRiHGlKSGK~---LKEfrGHs 348 (508)
T KOG0275 278 LASG-SQDGKIKVWRIE-TGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFD----QTVRIHGLKSGKC---LKEFRGHS 348 (508)
T ss_pred HHCC-CCCCCEEEEEEE-CCHHHHHHHHHHCCCEEEEEECCCCCHHHCCCCC----CEEEEECCCCCHH---HHHHCCCC
T ss_conf 6255-767837999986-1438887666532670589972576234215666----1589723444206---88744863
Q ss_pred ---EEEEECCCCCEEEEEECCCCCEEEEEEECCCCCC----CCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEE
Q ss_conf ---4445515895567741378730389984047741----100257764320255216747899723776533157640
Q gi|254780548|r 261 ---LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT----ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333 (447)
Q Consensus 261 ---~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~----~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~ 333 (447)
-...|++||.+|. +.+.||...+|- ..+++. +.+.....++ +...-|..-.-.-+.+|+. .+|+|++
T Consensus 349 Syvn~a~ft~dG~~ii-saSsDgtvkvW~--~KtteC~~Tfk~~~~d~~vn-sv~~~PKnpeh~iVCNrsn--tv~imn~ 422 (508)
T KOG0275 349 SYVNEATFTDDGHHII-SASSDGTVKVWH--GKTTECLSTFKPLGTDYPVN-SVILLPKNPEHFIVCNRSN--TVYIMNM 422 (508)
T ss_pred CCCCCEEECCCCCEEE-EECCCCCEEEEC--CCCHHHHHHCCCCCCCCCCE-EEEECCCCCCEEEEECCCC--EEEEEEC
T ss_conf 2002137748997588-843886279864--86422564056788765420-4797589986289972787--4999963
Q ss_pred CCCCCCEEEEEC--CCCEEEEEECCCCCEEEEEECCCCCEEEEEEEC-CCCCEEEEE
Q ss_conf 256741112203--530000468776888999971499157999988-999679966
Q gi|254780548|r 334 NGSDQKRISQDK--EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLV 387 (447)
Q Consensus 334 ~g~~~~rlT~~~--~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~-~g~~~~~lt 387 (447)
.|--+|-.+.+. .+.+.....||.|+|| |+-..++. +|-... .|+-++.|+
T Consensus 423 qGQvVrsfsSGkREgGdFi~~~lSpkGewi-YcigED~v--lYCF~~~sG~LE~tl~ 476 (508)
T KOG0275 423 QGQVVRSFSSGKREGGDFINAILSPKGEWI-YCIGEDGV--LYCFSVLSGKLERTLP 476 (508)
T ss_pred CCEEEEEECCCCCCCCCEEEEEECCCCCEE-EEECCCCE--EEEEEEECCCEEEEEE
T ss_conf 452776203677568855788844887489-99736857--9999961475026653
No 101
>pfam02239 Cytochrom_D1 Cytochrome D1 heme domain. Cytochrome cd1 (nitrite reductase) catalyses the conversion of nitrite to nitric oxide in the nitrogen cycle. This family represents the d1 heme binding domain of cytochrome cd1, in which His/Tyr side chains ligate the d1 heme iron of the active site in the oxidized state.
Probab=98.39 E-value=0.00019 Score=46.79 Aligned_cols=194 Identities=13% Similarity=0.136 Sum_probs=98.1
Q ss_pred CCCCCEEEEEEECCCCCCCCCEEEECCCCCE--EEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCC
Q ss_conf 6899848998503467644303771179717--99743798524445515895567741378730389984047741100
Q gi|254780548|r 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAP--KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297 (447)
Q Consensus 220 SpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~--~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~l 297 (447)
||-....++.- ++..+||+.|....... +.+ .....-...-|.|+|+.++.++.... .|-++|...++...+
T Consensus 136 s~~~~~fvv~l---kdtgeIw~Vdy~d~~~~~~~~i-~~~~~lhD~~~d~~~Ryfl~aa~~~n--ki~vvd~~~~k~v~l 209 (369)
T pfam02239 136 SPGRPEFVVNL---KDTGEIWLVDYSDGKNLKTTFI-GAAKFLHDGGFDPDGRYFLAAANASD--KIAVWDTKRGKLVAL 209 (369)
T ss_pred CCCCCEEEEEE---EECCEEEEEECCCCCCCCCEEE-CCCCCCCCCCCCCCCCEEEEECCCCC--CEEEEECCCCEEEEE
T ss_conf 58998699997---3289799997876887401586-65445646664798879987425887--065895588808997
Q ss_pred ------------CCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECC-CCCCEEEEECCCCEEEEEECCCCCEEEEE
Q ss_conf ------------25776432025521674789972377653315764025-67411122035300004687768889999
Q gi|254780548|r 298 ------------TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFT 364 (447)
Q Consensus 298 ------------T~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g-~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~ 364 (447)
.+-+.....|.|+-+|.....++.- |...+-+.+... ..+++|...|.+ . ...-+|+++++..-
T Consensus 210 ~d~gk~~~p~~~~n~pH~~~G~vW~~~~~g~~~ip~i-g~~~v~v~d~~~WkvVk~I~~~G~g-~-FvkthP~s~~lwvD 286 (369)
T pfam02239 210 LDTGKTPHPGPGANMPHLEGGPVWTTSHLGDFVTPLI-GTDPVLVHDLQNWKQVKEIDVAGGG-L-FVKTHPDSRYLWVD 286 (369)
T ss_pred ECCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEC-CCCCCCCCCCCCCEEEEEEECCCCC-E-EEECCCCCCCEEEE
T ss_conf 3368654888748996888763078568784444314-6797776775344697898158984-7-98769899638986
Q ss_pred E-CCCCCEEEEEEECCCCCE-EEEEC--CCCCCCCEECCCCCEEEEEEEECCCCCEEEEEEECCC
Q ss_conf 7-149915799998899967-99662--7875543788789989999950898733799998899
Q gi|254780548|r 365 K-FSGEKFAIGVMKKDGSQE-RLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425 (447)
Q Consensus 365 ~-~~~~~~~i~~~~~~g~~~-~~lt~--~~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G 425 (447)
. .....-.|+++|..+-+. +.++. +...-+|.|++||+.++++. .+++. .|.++|..-
T Consensus 287 ~~~~p~~~~v~viD~~tl~vv~~l~~~~gk~v~H~Ef~~~G~evwvSv-w~~~~--aivVyD~~T 348 (369)
T pfam02239 287 TFLNPDNDSVAVIDSETLEIILPLAPWPGLVVVHMEFNKRGDEVWLSV-WDGKG--ALVVYDDKT 348 (369)
T ss_pred CCCCCCCCEEEEEECCCCCEEECCCCCCCCCEECCEECCCCCEEEEEE-ECCCC--EEEEEECCC
T ss_conf 677999887999988875277703304898388541999999999998-67999--699998988
No 102
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=98.39 E-value=0.0002 Score=46.70 Aligned_cols=162 Identities=11% Similarity=0.184 Sum_probs=83.1
Q ss_pred EEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCC-CEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCC
Q ss_conf 4557689984899850346764430377117971799743798-524445515895567741378730389984047741
Q gi|254780548|r 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294 (447)
Q Consensus 216 sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~-~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~ 294 (447)
.-+++|||+.+ |++-.......+++.|..++...+.+ +.| .-..-+++|||++++.+- .+...|.++|.++...
T Consensus 120 ~~~~~~~~~~v-YV~n~~~~~~~vsvid~~t~~~~~~~--~vG~~P~~~a~~p~g~~vyv~~--~~~~~v~vi~~~~~~v 194 (381)
T COG3391 120 GLAVDPDGKYV-YVANAGNGNNTVSVIDAATNKVTATI--PVGNTPTGVAVDPDGNKVYVTN--SDDNTVSVIDTSGNSV 194 (381)
T ss_pred EEEECCCCCEE-EEEECCCCCCEEEEEECCCCEEEEEE--CCCCCCCCEEECCCCCEEEEEE--CCCCEEEEEECCCCEE
T ss_conf 07976889869-99824778845999837886488884--5888875369889998899972--7998799970777513
Q ss_pred CCCCCC---CCCCCC---EEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCC-CEEEEEECCCCCEEEEEECC
Q ss_conf 100257---764320---25521674789972377653315764025674111220353-00004687768889999714
Q gi|254780548|r 295 ERLTNT---LFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFTKFS 367 (447)
Q Consensus 295 ~~lT~~---~~~d~~---p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~-~~~~p~wSPdG~~Iaf~~~~ 367 (447)
.+ ... ...... ..++|||++++-.-+.+....+.+++...+.+......... ....-..+|+|+.+......
T Consensus 195 ~~-~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~ 273 (381)
T COG3391 195 VR-GSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQ 273 (381)
T ss_pred EC-CCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCEEEEEECCCCEEEEEEECCCCCCCCCEEECCCCCEEEEEECC
T ss_conf 22-67663345678875049888998899995267773389774677417997401466676650668998789998568
Q ss_pred CCCEEEEEEECCCCCEEE
Q ss_conf 991579999889996799
Q gi|254780548|r 368 GEKFAIGVMKKDGSQERL 385 (447)
Q Consensus 368 ~~~~~i~~~~~~g~~~~~ 385 (447)
.+ .++++|..+.....
T Consensus 274 ~~--~V~vid~~~~~v~~ 289 (381)
T COG3391 274 GG--TVSVIDGATDRVVK 289 (381)
T ss_pred CC--EEEEEECCCCEEEE
T ss_conf 98--48886388845887
No 103
>KOG1273 consensus
Probab=98.38 E-value=1.9e-05 Score=53.58 Aligned_cols=235 Identities=17% Similarity=0.191 Sum_probs=114.4
Q ss_pred EEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCE
Q ss_conf 01231145540268862176402345576899848998503467644303771179717997437985244455158955
Q gi|254780548|r 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271 (447)
Q Consensus 192 ~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~ 271 (447)
++.|-|.|-.++-.+...+-..+.+-+||+||+++.-.|. ...|-+.|+..|.-.+.+ .|+.......|.|-.+.
T Consensus 46 ~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~----D~si~lwDl~~gs~l~ri-rf~spv~~~q~hp~k~n 120 (405)
T KOG1273 46 RVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSR----DWSIKLWDLLKGSPLKRI-RFDSPVWGAQWHPRKRN 120 (405)
T ss_pred CEEEEECCCCCHHHHHHCCCCCEEEEEECCCCCEEEEECC----CCEEEEEECCCCCCEEEE-ECCCCCCEEEECCCCCC
T ss_conf 2899971132366664303332367776477877553047----763688862689820588-83684010141345577
Q ss_pred EEEEECCCCCEEEEEEECCCCCCCCCCCCCC--CCCCEE---EECCCCEEEEEECCCCCCCEEEEEECCCCC---CEEEE
Q ss_conf 6774137873038998404774110025776--432025---521674789972377653315764025674---11122
Q gi|254780548|r 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLF--INISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQ---KRISQ 343 (447)
Q Consensus 272 la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~--~d~~p~---~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~---~rlT~ 343 (447)
.+++.--+..+ ++++...+..+-|..+.. .+.+++ |.+-|+.|+ +-+-.|. |-++++++-+. -|+|.
T Consensus 121 ~~va~~~~~sp--~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIi-tGtsKGk--llv~~a~t~e~vas~rits 195 (405)
T KOG1273 121 KCVATIMEESP--VVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYII-TGTSKGK--LLVYDAETLECVASFRITS 195 (405)
T ss_pred EEEEEEECCCC--EEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEE-EECCCCE--EEEEECCHHEEEEEEEECH
T ss_conf 37999705785--79992697125555799655444555563058887899-7457534--9999541141031235200
Q ss_pred ECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECC-----C--CCEEEEE--CCCCCC----CCEECCCCCEEEEEEEE
Q ss_conf 035300004687768889999714991579999889-----9--9679966--278755----43788789989999950
Q gi|254780548|r 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-----G--SQERLLV--EDSNLQ----APTWSPSGRSLIFSRKK 410 (447)
Q Consensus 344 ~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~-----g--~~~~~lt--~~~~~e----~P~wSPDG~~i~f~~~~ 410 (447)
..+.-+-.+|-.|+.+++...+. . |.+++.. | ++....- .+-.+. .-.||-||.+|+-.+.+
T Consensus 196 --~~~IK~I~~s~~g~~liiNtsDR-v--IR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s~~ 270 (405)
T KOG1273 196 --VQAIKQIIVSRKGRFLIINTSDR-V--IRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGSAR 270 (405)
T ss_pred --HEEEEEEEEECCCCEEEEECCCC-E--EEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCEEEECCCC
T ss_conf --20030799702575899834771-5--999733553044756775756899998756434110455885589810333
Q ss_pred CCCCCEEEEEEEC-CCCCEEECC-CCCC-CCCCCCCCC
Q ss_conf 8987337999988-997147336-7887-367531655
Q gi|254780548|r 411 DGDTGSKLYSIDL-NGRNETLIN-TPAY-ASDPQWVGF 445 (447)
Q Consensus 411 ~g~~~~~l~~~~~-~G~~~~~~~-~~g~-~~~P~WsP~ 445 (447)
.-.||.=.. .|.-.+.+. +.|+ ..+-+|.|+
T Consensus 271 ----aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~ 304 (405)
T KOG1273 271 ----AHALYIWEKSIGSLVKILHGTKGEELLDVNWHPV 304 (405)
T ss_pred ----CEEEEEEECCCCCEEEEECCCCHHHEEECCCCCC
T ss_conf ----1068999637762245542776001010354400
No 104
>pfam07433 DUF1513 Protein of unknown function (DUF1513). This family consists of several bacterial proteins of around 360 residues in length. The function of this family is unknown.
Probab=98.30 E-value=0.00032 Score=45.34 Aligned_cols=198 Identities=20% Similarity=0.237 Sum_probs=105.5
Q ss_pred CEEEEEECCCCCCCCEEEEEECC-CCCEEEEEEECCCC-CEEEEEECCCCCEEEEEEE---CCCCCCCCCEEEECCCCCE
Q ss_conf 17887513676442100123114-55402688621764-0234557689984899850---3467644303771179717
Q gi|254780548|r 176 RILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQ-ILFEPRFSPNQQKVAYATY---DDEDILRVYLMDTRIDRAP 250 (447)
Q Consensus 176 riafv~~~~~~~~~~~~l~i~d~-DG~n~~~l~~~~~~-~~~sP~wSpDG~~Iay~s~---~~~~~~~i~~~~~~~g~~~ 250 (447)
+.+++.++-+ .-+++.|. +|.-++.++...+- ....-.|||||+.+ |++- +.+. ..|-++|... .-
T Consensus 18 ~avafARRPG-----~~~~v~D~~~g~~~~~l~a~~~RHFyGHg~fs~DG~~L-ytTEnd~~~g~-G~IGV~d~~~--~~ 88 (304)
T pfam07433 18 RAVAFARRPG-----TFALVFDPRTGQELQTLASPPGRHFYGHGVFSPDGRLL-YTTENDYETGR-GVIGVYDAAD--GY 88 (304)
T ss_pred EEEEEEECCC-----CEEEEEECCCCCEEEEECCCCCCEEECCEEECCCCCEE-EECCCCCCCCC-EEEEEEECCC--CC
T ss_conf 3999997997-----68999985899564788289997771566074998989-96155667885-7999999546--94
Q ss_pred EEEECCCCCEEEE---EECCCCCEEEEEEC----C--CC---------CEEEEEEECCCCCC-CC--CCC--C-CCCCCC
Q ss_conf 9974379852444---55158955677413----7--87---------30389984047741-10--025--7-764320
Q gi|254780548|r 251 KRIGNFRSMILAP---RFSSNGKRALISVQ----K--DE---------AMDIYSVDLQSNAT-ER--LTN--T-LFINIS 306 (447)
Q Consensus 251 ~~~~~~~~~~~~p---~wSPDG~~la~~~s----~--~g---------~~~I~~~d~~~~~~-~~--lT~--~-~~~d~~ 306 (447)
+++..++..-..| .|.|||+.|++.-- . .| .+.|-.+|..+|++ .| |.. + .+| ..
T Consensus 89 ~ri~Ef~s~GiGPHel~l~pdg~tLvVANGGI~Thpd~gR~kLNL~tM~psL~~ld~~sG~ll~q~~L~~~~~~lSi-RH 167 (304)
T pfam07433 89 KRIGEFSTGGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDRRTGALLEQVELPPDLHQLSI-RH 167 (304)
T ss_pred EEEEEECCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCEEEECCCCCCEEEEEECCHHHHHCCE-EE
T ss_conf 89868648998840189949999899981882378877861047201586169980789868888866956711526-77
Q ss_pred EEEECCCCEEEEEECCCC----CCCEEEEEECCCCCCEEEE------E-CCCCEEEEEECCCCCEEEEEECCCCCEEEEE
Q ss_conf 255216747899723776----5331576402567411122------0-3530000468776888999971499157999
Q gi|254780548|r 307 ASYSPDSSQIVFESDREG----KEQLYVMQSNGSDQKRISQ------D-KEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375 (447)
Q Consensus 307 p~~spDG~~I~f~Sdr~G----~~qiy~~~~~g~~~~rlT~------~-~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~ 375 (447)
-++.+||. ++|---.-| .+-|--+-..|+..+.+.. . ..| ..+.++++||..|+.++-.++.+.+
T Consensus 168 La~~~~G~-V~~g~Q~qG~~~~~~PLla~~~~g~~~~~~~~~~~~~~~l~gY-~GSIA~~~~g~~ia~TsPrGg~~~~-- 243 (304)
T pfam07433 168 LAVDGDGT-VWFGQQYEGEPGDAPPLVALHRRGQALQLLPAPEEQWRRLNGY-IGSVAADRDGRLVAVTSPRGGRVAI-- 243 (304)
T ss_pred EEECCCCC-EEEEEEECCCCCCCCCEEEEECCCCCCEECCCCHHHHHHHCCE-EEEEEECCCCCEEEEECCCCCEEEE--
T ss_conf 89879995-9999860489766788799983999654757997798863891-7999986899999997898887999--
Q ss_pred EECCCCCEEEEE
Q ss_conf 988999679966
Q gi|254780548|r 376 MKKDGSQERLLV 387 (447)
Q Consensus 376 ~~~~g~~~~~lt 387 (447)
+|.+++......
T Consensus 244 ~d~~tg~~~~~~ 255 (304)
T pfam07433 244 WDAATGRLLGLV 255 (304)
T ss_pred EECCCCCEEECC
T ss_conf 989986734031
No 105
>pfam07676 PD40 WD40-like Beta Propeller Repeat. This family appears to be related to the pfam00400 repeat This This repeat corresponds to the RIVW repeat identified in cell surface proteins [Adindla et al. Comparative and Functional Genomics 2004; 5:2-16].
Probab=98.26 E-value=5.2e-07 Score=63.99 Aligned_cols=37 Identities=43% Similarity=0.618 Sum_probs=31.1
Q ss_pred CCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEE
Q ss_conf 1100257764320255216747899723776533157
Q gi|254780548|r 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330 (447)
Q Consensus 294 ~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~ 330 (447)
+++||+..+.+..|+|||||++|+|+|+|.|..+||+
T Consensus 1 ~~~lt~~~~~~~~P~~SpDG~~i~f~s~r~g~~~iyv 37 (37)
T pfam07676 1 LKRLTNTPGNEGEPSWSPDGKRLAFTSDRGGSPDIYV 37 (37)
T ss_pred CEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEC
T ss_conf 9511379985577309789999999956899833329
No 106
>KOG2315 consensus
Probab=98.24 E-value=0.00042 Score=44.56 Aligned_cols=153 Identities=14% Similarity=0.131 Sum_probs=85.9
Q ss_pred EEECCCCCEEEEEE--ECCC------CCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEE
Q ss_conf 55768998489985--0346------764430377117971799743798524445515895567741378730389984
Q gi|254780548|r 217 PRFSPNQQKVAYAT--YDDE------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288 (447)
Q Consensus 217 P~wSpDG~~Iay~s--~~~~------~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d 288 (447)
-.|.+-|..|.-+. .-++ +...+|++++. |....+-..-.|-..+..|||+|+..+++... --.-+-++|
T Consensus 223 m~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~-g~s~~V~L~k~GPVhdv~W~~s~~EF~VvyGf-MPAkvtifn 300 (566)
T KOG2315 223 MKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQ-GESVSVPLLKEGPVHDVTWSPSGREFAVVYGF-MPAKVTIFN 300 (566)
T ss_pred EEECCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEEC-CCEEEEECCCCCCCEEEEECCCCCEEEEEEEC-CCCEEEEEC
T ss_conf 8742688569999998564778651033068999714-84689866777872478988989878899703-652278975
Q ss_pred CCCCCCCCCCCCCCCCCCEEEECCCCEEEEEE--CCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEE-
Q ss_conf 04774110025776432025521674789972--377653315764025674111220353000046877688899997-
Q gi|254780548|r 289 LQSNATERLTNTLFINISASYSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK- 365 (447)
Q Consensus 289 ~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~S--dr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~- 365 (447)
+.+..+--+-.++-+ ..-|+|.|+.|++.- +-.|. +=+.|+.. .+.|+.....+..--.|||||++|+-..
T Consensus 301 lr~~~v~df~egpRN--~~~fnp~g~ii~lAGFGNL~G~--mEvwDv~n--~K~i~~~~a~~tt~~eW~PdGe~flTATT 374 (566)
T KOG2315 301 LRGKPVFDFPEGPRN--TAFFNPHGNIILLAGFGNLPGD--MEVWDVPN--RKLIAKFKAANTTVFEWSPDGEYFLTATT 374 (566)
T ss_pred CCCCEEEECCCCCCC--CEEECCCCCEEEEEECCCCCCC--EEEEECCC--HHHCCCCCCCCCEEEEECCCCCEEEEEEC
T ss_conf 888776767988754--3577788888999525888774--68885146--32200333477338888699867999713
Q ss_pred ----CCCCCEEEEEEE
Q ss_conf ----149915799998
Q gi|254780548|r 366 ----FSGEKFAIGVMK 377 (447)
Q Consensus 366 ----~~~~~~~i~~~~ 377 (447)
+.+.++.||.+.
T Consensus 375 aPRlrvdNg~Kiwhyt 390 (566)
T KOG2315 375 APRLRVDNGIKIWHYT 390 (566)
T ss_pred CCCEEECCCEEEEEEC
T ss_conf 6527860876899840
No 107
>KOG0284 consensus
Probab=98.24 E-value=1.1e-05 Score=55.02 Aligned_cols=171 Identities=16% Similarity=0.209 Sum_probs=97.1
Q ss_pred EEEEECCCCCCCCEEEEEECC-CCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECC
Q ss_conf 887513676442100123114-5540268862176402345576899848998503467644303771179717997437
Q gi|254780548|r 178 LFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256 (447)
Q Consensus 178 afv~~~~~~~~~~~~l~i~d~-DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~ 256 (447)
.|++-+... .-+|| |. -+.+.++| .+.+..+-+-.|.|--.-|| |..+.+ -|-+.|.++|+....+..+
T Consensus 194 kF~t~SdDg---~ikiW--df~~~kee~vL-~GHgwdVksvdWHP~kgLia--sgskDn--lVKlWDprSg~cl~tlh~H 263 (464)
T KOG0284 194 KFLTCSDDG---TIKIW--DFRMPKEERVL-RGHGWDVKSVDWHPTKGLIA--SGSKDN--LVKLWDPRSGSCLATLHGH 263 (464)
T ss_pred EEEEECCCC---EEEEE--ECCCCCHHHEE-CCCCCCCCEECCCCCCCEEE--ECCCCC--EEEEECCCCCCHHHHHHHC
T ss_conf 168852798---18998--43678623300-15887761122577542367--735785--3676658872035565403
Q ss_pred CCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCC-CCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECC
Q ss_conf 98524445515895567741378730389984047-74110025776432025521674789972377653315764025
Q gi|254780548|r 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335 (447)
Q Consensus 257 ~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~-~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g 335 (447)
+....+..|+|+|.+|+ +.++|-...+| |+.+ +++...-.+.-..++..|+|=-..|. ++. +..-+|+-..+..
T Consensus 264 KntVl~~~f~~n~N~Ll-t~skD~~~kv~--DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lf-tsg-g~Dgsvvh~~v~~ 338 (464)
T KOG0284 264 KNTVLAVKFNPNGNWLL-TGSKDQSCKVF--DIRTMKELFTYRGHKKDVTSLTWHPLNESLF-TSG-GSDGSVVHWVVGL 338 (464)
T ss_pred CCEEEEEEECCCCCEEE-ECCCCCEEEEE--EHHHHHHHHHHHCCHHHHEEECCCCCCCCCE-EEC-CCCCCEEEEECCC
T ss_conf 33179999768988557-71577437888--5167688877643311310201110463202-313-5777568996366
Q ss_pred CCCC-EEEEECCCCEEEEEECCCCCEEEE
Q ss_conf 6741-112203530000468776888999
Q gi|254780548|r 336 SDQK-RISQDKEASYFDPVWSPQGDLIAF 363 (447)
Q Consensus 336 ~~~~-rlT~~~~~~~~~p~wSPdG~~Iaf 363 (447)
.++. .+-...+....+.+|.|-|.-++-
T Consensus 339 ~~p~~~i~~AHd~~iwsl~~hPlGhil~t 367 (464)
T KOG0284 339 EEPLGEIPPAHDGEIWSLAYHPLGHILAT 367 (464)
T ss_pred CCCCCCCCCCCCCCEEEEECCCCCEEEEE
T ss_conf 65356788643463554302654306762
No 108
>pfam11684 DUF3280 Protein of unknown function (DUF2380). This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=98.24 E-value=1.4e-05 Score=54.43 Aligned_cols=112 Identities=21% Similarity=0.303 Sum_probs=78.5
Q ss_pred CEEEEECCCCCCC--------CHH------HHHHHHHHHHHHCCCCEEECCHHHCCCCCCCCCCC-----CCHHHHHHCC
Q ss_conf 2004630567753--------035------78999999862017514550865503466761114-----5778874156
Q gi|254780548|r 47 PVSIAFTKFVSID--------ELG------GKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSI-----PRFQDWNSLG 107 (447)
Q Consensus 47 pi~IAv~~f~~~~--------~~~------~~i~~ii~~DL~~SG~F~~i~~~~~~~~~~~~~~~-----~~f~~W~~~g 107 (447)
|.++||++|+=.+ ..+ ..+++.++.+|..+|.|++++.+............ -...--+.+|
T Consensus 1 p~kvAvf~fel~D~s~e~~~~~~~ae~~RL~~~~~~lr~~l~~sGry~~vd~ap~a~~~~~~~~l~~C~gC~~~~Ar~lG 80 (140)
T pfam11684 1 PPKVAVFDFELIDTSLEGALGPTAAEQARLAAVTDALREDLAESGRYRLVDLAPVAAEIAKIANLAKCGGCDARIARKLG 80 (140)
T ss_pred CCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHCC
T ss_conf 98379953687438877788989899999999999999999864984763660666666303895426666789999739
Q ss_pred CCEEEEEEEEECCCCEEEEEEEEECCCCCCEECCCCCC--CC-HHHHHHHHHHH
Q ss_conf 21899999740466225789998415554200002323--37-77889999999
Q gi|254780548|r 108 AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFF--SS-PASWRKIAHTI 158 (447)
Q Consensus 108 ad~lv~G~i~~~~~~~~~v~~~L~dv~~~~~i~~~~~~--~~-~~~~R~~ah~~ 158 (447)
|++.++|.+++..+--+.+++++.|+.+|+++.+++.. ++ ..+|++-.+.+
T Consensus 81 Ad~~i~G~VqKvSnlil~~~~~v~d~~tg~~v~~~~vdiRgntD~sW~Rg~~~l 134 (140)
T pfam11684 81 ADYALTGEVQKVSNLILNLNVYVRDVESGRLVRGGSVDIRGNTDESWERGMRYL 134 (140)
T ss_pred CCEEEEEEEEECCCEEEEEEEEEEECCCCCEEECCEEEEECCCHHHHHHHHHHH
T ss_conf 988999999705635799999999867897786001065258607899888998
No 109
>KOG0296 consensus
Probab=98.24 E-value=0.00043 Score=44.48 Aligned_cols=99 Identities=14% Similarity=0.201 Sum_probs=54.2
Q ss_pred EEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCC
Q ss_conf 00123114554026886217640234557689984899850346764430377117971799743798524445515895
Q gi|254780548|r 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270 (447)
Q Consensus 191 ~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~ 270 (447)
-.||-++. |.-...+...-+.+.. -+|.|-+.-+++=+ ....+|++.+..+...+....+........|.||||
T Consensus 130 v~v~~~st-g~~~~~~~~e~~dieW-l~WHp~a~illAG~----~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGK 203 (399)
T KOG0296 130 VLVFKVST-GGEQWKLDQEVEDIEW-LKWHPRAHILLAGS----TDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGK 203 (399)
T ss_pred EEEEECCC-CCEEEEEECCCCCEEE-EEECCCCCEEEEEC----CCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCC
T ss_conf 89998146-8468884053473489-97435652798646----888389998898532457338999840251537874
Q ss_pred EEEEEECCCCCEEEEEEECCCCCC-CCCC
Q ss_conf 567741378730389984047741-1002
Q gi|254780548|r 271 RALISVQKDEAMDIYSVDLQSNAT-ERLT 298 (447)
Q Consensus 271 ~la~~~s~~g~~~I~~~d~~~~~~-~~lT 298 (447)
+++. ...+|..-+| |+.++++ .+++
T Consensus 204 r~~t-gy~dgti~~W--n~ktg~p~~~~~ 229 (399)
T KOG0296 204 RILT-GYDDGTIIVW--NPKTGQPLHKIT 229 (399)
T ss_pred EEEE-EECCCEEEEE--ECCCCCEEEEEC
T ss_conf 5899-9538649997--167796459852
No 110
>KOG0282 consensus
Probab=98.23 E-value=6.2e-05 Score=50.10 Aligned_cols=236 Identities=15% Similarity=0.197 Sum_probs=117.8
Q ss_pred EEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEE
Q ss_conf 12311455402688621764023455768998489985034676443037711797179974379852444551589556
Q gi|254780548|r 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272 (447)
Q Consensus 193 l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~l 272 (447)
||=.=-||.-.|....++. .+..-+||++|.++.=.||+. -|.+.|++||+....... .-......|.||+..+
T Consensus 241 lW~vy~~~~~lrtf~gH~k-~Vrd~~~s~~g~~fLS~sfD~----~lKlwDtETG~~~~~f~~-~~~~~cvkf~pd~~n~ 314 (503)
T KOG0282 241 LWNVYDDRRCLRTFKGHRK-PVRDASFNNCGTSFLSASFDR----FLKLWDTETGQVLSRFHL-DKVPTCVKFHPDNQNI 314 (503)
T ss_pred EEEEECCCCEEHHHHCCHH-HHHHHHCCCCCCEEEEEECCE----EEEEECCCCCEEEEEEEC-CCCCEEEECCCCCCCE
T ss_conf 9998507630102321114-666530165688465410110----344200345458888756-9875034027899857
Q ss_pred EEEECCCCCEEEEEEECCCCCCCCC-CCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEE
Q ss_conf 7741378730389984047741100-257764320255216747899723776533157640256741112203530000
Q gi|254780548|r 273 LISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351 (447)
Q Consensus 273 a~~~s~~g~~~I~~~d~~~~~~~~l-T~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~ 351 (447)
+++...++ .|-..|..++++.|= -.+-+--..-+|-|+|++.+-+||.. +--||..... -..+.+........-.
T Consensus 315 fl~G~sd~--ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdk-s~riWe~~~~-v~ik~i~~~~~hsmP~ 390 (503)
T KOG0282 315 FLVGGSDK--KIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDK-SVRIWENRIP-VPIKNIADPEMHTMPC 390 (503)
T ss_pred EEEECCCC--CEEEEECCCHHHHHHHHHHHHHEEEEEECCCCCEEEEECCCC-CEEEEECCCC-CCCHHHCCHHHCCCCC
T ss_conf 98715787--179986353488999886442001158723884376612676-2899875788-6301100311203750
Q ss_pred EEECCCCCEEEEEECCCCCEEEEEEECCCC---CEEEEECCCCCC----CCEECCCCCEEEEEEEECCCCCEEEEEEECC
Q ss_conf 468776888999971499157999988999---679966278755----4378878998999995089873379999889
Q gi|254780548|r 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQ----APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424 (447)
Q Consensus 352 p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~---~~~~lt~~~~~e----~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~ 424 (447)
-..+|.|++++-.+..+ .|++..+.-. ..+..-++.... .-.|||||++|++ .+.+| .++.-|-.
T Consensus 391 ~~~~P~~~~~~aQs~dN---~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~S-GdsdG----~v~~wdwk 462 (503)
T KOG0282 391 LTLHPNGKWFAAQSMDN---YIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCS-GDSDG----KVNFWDWK 462 (503)
T ss_pred EECCCCCCEEHHHCCCC---EEEEEECCCCCCCCHHHHHCCEECCCCEEEEEECCCCCEEEE-ECCCC----CEEEEECH
T ss_conf 44079987620003676---589986155343487666334122673156777699875886-16886----28996160
Q ss_pred C-CCEEECCCC-CCCCCCCCCCCC
Q ss_conf 9-714733678-873675316557
Q gi|254780548|r 425 G-RNETLINTP-AYASDPQWVGFM 446 (447)
Q Consensus 425 G-~~~~~~~~~-g~~~~P~WsP~~ 446 (447)
- +....+... +-+..-.|.|-+
T Consensus 463 t~kl~~~lkah~~~ci~v~wHP~e 486 (503)
T KOG0282 463 TTKLVSKLKAHDQPCIGVDWHPVE 486 (503)
T ss_pred HHHHHHCCCCCCCCEEEEEECCCC
T ss_conf 665654045688665877723787
No 111
>KOG0771 consensus
Probab=98.22 E-value=0.00018 Score=47.01 Aligned_cols=211 Identities=18% Similarity=0.171 Sum_probs=97.4
Q ss_pred EEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCC
Q ss_conf 55768998489985034676443037711797179974379852444551589556774137873038998404774110
Q gi|254780548|r 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296 (447)
Q Consensus 217 P~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~ 296 (447)
-++++||.++|-. ...+..+||-+ ..-....-...+.+..-.-.|||||+.|++... + ...+|..+. +-.+.+
T Consensus 150 vaf~~~gs~latg--g~dg~lRv~~~--Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~-d-~~~VW~~~~-g~~~a~ 222 (398)
T KOG0771 150 VAFNGDGSKLATG--GTDGTLRVWEW--PSMLTILEEIAHHAEVKDLDFSPDGKFLASIGA-D-SARVWSVNT-GAALAR 222 (398)
T ss_pred EEECCCCCEEEEC--CCCCEEEEEEC--CCCHHHHHHHHHCCCCCCCEECCCCCEEEEECC-C-CEEEEEECC-CCHHHH
T ss_conf 9985789776431--45526999856--760145545764183103110788738999548-8-258998056-860211
Q ss_pred CCCCCCCC--CCEEEECCC---CEEEEEE-CCCCCCCEEEEEECCC----CCCEEEEECCCCEEEEEECCCCCEEEEEEC
Q ss_conf 02577643--202552167---4789972-3776533157640256----741112203530000468776888999971
Q gi|254780548|r 297 LTNTLFIN--ISASYSPDS---SQIVFES-DREGKEQLYVMQSNGS----DQKRISQDKEASYFDPVWSPQGDLIAFTKF 366 (447)
Q Consensus 297 lT~~~~~d--~~p~~spDG---~~I~f~S-dr~G~~qiy~~~~~g~----~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~ 366 (447)
+|...... ..-.|+-|+ ...+|++ .++|.-..+...+-.+ ..++.+.. .....+.+.|+||+.+|.-..
T Consensus 223 ~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~-~~siSsl~VS~dGkf~AlGT~ 301 (398)
T KOG0771 223 KTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKR-FKSISSLAVSDDGKFLALGTM 301 (398)
T ss_pred CCCCCCCHHHHHCEECCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCHHHHHHC-CCCCEEEEECCCCCEEEEECC
T ss_conf 4876643043311101248775489998617888446887545326642201123312-575036887588847998606
Q ss_pred CCCCEEEEEEECCCCCEEEEE---CCCCCCCCEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEECCCCCCCCCCCC
Q ss_conf 499157999988999679966---2787554378878998999995089873379999889971473367887367531
Q gi|254780548|r 367 SGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442 (447)
Q Consensus 367 ~~~~~~i~~~~~~g~~~~~lt---~~~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~~~~~~g~~~~P~W 442 (447)
++. +.+++...=+.-++- +.+..-.-.||||-++.+=.+ ......+..+.+|-+.. +-..+..-..|+|
T Consensus 302 dGs---Vai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svS---s~~~~~v~~l~vd~~~~-~~~~~~~~~~~~~ 373 (398)
T KOG0771 302 DGS---VAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVS---SDNEAAVTKLAVDKTMQ-LHRLPKRRKIPAW 373 (398)
T ss_pred CCC---EEEEEECEEEEEEEEHHHHEEEEEEEEECCCCCCCCCCC---CCCCEEEEEEEECCCCC-CCCCCCCHHHHHH
T ss_conf 785---899990000556751324020566689867757543235---57702589996034221-3456631054699
No 112
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171.
Probab=98.22 E-value=1.6e-05 Score=54.09 Aligned_cols=178 Identities=20% Similarity=0.327 Sum_probs=97.0
Q ss_pred EEEEEECCCCCEEEEEEC---CCCCEEEEEEECCC--CCCCCCC-CCCCCCCCEEE--ECCCC-EEEEEECCCCCC----
Q ss_conf 244455158955677413---78730389984047--7411002-57764320255--21674-789972377653----
Q gi|254780548|r 260 ILAPRFSSNGKRALISVQ---KDEAMDIYSVDLQS--NATERLT-NTLFINISASY--SPDSS-QIVFESDREGKE---- 326 (447)
Q Consensus 260 ~~~p~wSPDG~~la~~~s---~~g~~~I~~~d~~~--~~~~~lT-~~~~~d~~p~~--spDG~-~I~f~Sdr~G~~---- 326 (447)
.+=|..||||+++||+-. ..|.+.||+.||+. +.+.+|- ...+| |.| .+.|+ -|+|++|-+-+-
T Consensus 367 vyHPDISPDG~~VAFCT~~EG~~GkS~vYVR~Ln~~G~~LVKL~VEnAAI---PRWrV~EnGDTvIVYV~dA~nNKDd~~ 443 (982)
T TIGR02171 367 VYHPDISPDGKKVAFCTGIEGVDGKSEVYVRDLNASGSGLVKLDVENAAI---PRWRVLENGDTVIVYVSDASNNKDDAE 443 (982)
T ss_pred EECCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCEEECCCCCCC---CCEEECCCCCEEEEEECCCCCCCHHHH
T ss_conf 20274079868745763411447874389844555789812206457437---840567998879999701667861899
Q ss_pred ----CEEEEEECC---CCCCEEEEECCCC------------------------------EEEEEECC-------------
Q ss_conf ----315764025---6741112203530------------------------------00046877-------------
Q gi|254780548|r 327 ----QLYVMQSNG---SDQKRISQDKEAS------------------------------YFDPVWSP------------- 356 (447)
Q Consensus 327 ----qiy~~~~~g---~~~~rlT~~~~~~------------------------------~~~p~wSP------------- 356 (447)
=-|.+.... |++++| ++|.|+ ..+-+|=-
T Consensus 444 F~~~STW~VpFa~GKFG~P~KL-fDGAYHGGVs~~~~lAVsGarLLRa~v~~~G~~~~~~~D~vWYNdGdegEQACNaSL 522 (982)
T TIGR02171 444 FAAESTWQVPFANGKFGKPKKL-FDGAYHGGVSEDKRLAVSGARLLRARVAKEGKVVAKGKDDVWYNDGDEGEQACNASL 522 (982)
T ss_pred HHHCCCEEEECCCCCCCCHHHH-CCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHCCCH
T ss_conf 9834880775078887861232-053413650147622320356668887017871135413788615887210200013
Q ss_pred --CCC-EEEEEECCC---CCE---------EEEEEECCCCCEEEEEC--CCCCCCCEECC-------CCCEEEEEEEECC
Q ss_conf --688-899997149---915---------79999889996799662--78755437887-------8998999995089
Q gi|254780548|r 357 --QGD-LIAFTKFSG---EKF---------AIGVMKKDGSQERLLVE--DSNLQAPTWSP-------SGRSLIFSRKKDG 412 (447)
Q Consensus 357 --dG~-~Iaf~~~~~---~~~---------~i~~~~~~g~~~~~lt~--~~~~e~P~wSP-------DG~~i~f~~~~~g 412 (447)
||. +=+|.-..| ..| +|-|+|-.|.-++-+.. +..-.+--|-- +.-.|+=.++.+|
T Consensus 523 akDGs~RTLFLDFGG~TG~~Fvg~kYgvHERlLVaDS~GkLV~~vaaP~GytFDHtEWV~GmlnGe~~N~aVAtLtn~nG 602 (982)
T TIGR02171 523 AKDGSKRTLFLDFGGSTGRAFVGQKYGVHERLLVADSKGKLVRAVAAPAGYTFDHTEWVLGMLNGERSNLAVATLTNVNG 602 (982)
T ss_pred HCCCCCCEEEEECCCCCCHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCHHHEEEEECCCCCCEEEEEEECCCC
T ss_conf 20776732688568861045404775102244563147761332267888884411320212147885479996626866
Q ss_pred CCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 8733799998899714733678873675316557
Q gi|254780548|r 413 DTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446 (447)
Q Consensus 413 ~~~~~l~~~~~~G~~~~~~~~~g~~~~P~WsP~~ 446 (447)
. ..+|.+|++.-+....|-..+|. |.|-|
T Consensus 603 a-H~KiALiNl~~~~v~eLVEGdEL----WHPcL 631 (982)
T TIGR02171 603 A-HKKIALINLSDSKVTELVEGDEL----WHPCL 631 (982)
T ss_pred C-CCEEEEEECCCCCEEEEECCCCC----CCCCE
T ss_conf 6-43488998378847998616877----78711
No 113
>KOG0645 consensus
Probab=98.19 E-value=0.00054 Score=43.82 Aligned_cols=153 Identities=14% Similarity=0.232 Sum_probs=69.4
Q ss_pred CEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEEC---CCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEC
Q ss_conf 0234557689984899850346764430377117971799743---7985244455158955677413787303899840
Q gi|254780548|r 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN---FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289 (447)
Q Consensus 213 ~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~---~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~ 289 (447)
-+.+-+|||.|+-+|-.||.. ..-||-.. ++.-+.++. +....-+.+||++|..|| +.++|..--||.++
T Consensus 63 sVRsvAwsp~g~~La~aSFD~--t~~Iw~k~---~~efecv~~lEGHEnEVK~Vaws~sG~~LA-TCSRDKSVWiWe~d- 135 (312)
T KOG0645 63 SVRSVAWSPHGRYLASASFDA--TVVIWKKE---DGEFECVATLEGHENEVKCVAWSASGNYLA-TCSRDKSVWIWEID- 135 (312)
T ss_pred EEEEEEECCCCCEEEEEECCC--EEEEEECC---CCCEEEEEEEECCCCCEEEEEECCCCCEEE-EEECCCEEEEEEEC-
T ss_conf 032456357775789841250--58986237---885267765304655146899848998787-84089749999954-
Q ss_pred CCCCCC---CCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCC-EEEEECCC-CEEEEEECCCCCEEEEE
Q ss_conf 477411---00257764320255216747899723776533157640256741-11220353-00004687768889999
Q gi|254780548|r 290 QSNATE---RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEA-SYFDPVWSPQGDLIAFT 364 (447)
Q Consensus 290 ~~~~~~---~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~-rlT~~~~~-~~~~p~wSPdG~~Iaf~ 364 (447)
++.+.. -|+.|.--.-...|.|-- -+.|+......-.+|.-.. +..-. .-|.++.. ....-.|.|.|.+++-+
T Consensus 136 eddEfec~aVL~~HtqDVK~V~WHPt~-dlL~S~SYDnTIk~~~~~~-dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~ 213 (312)
T KOG0645 136 EDDEFECIAVLQEHTQDVKHVIWHPTE-DLLFSCSYDNTIKVYRDED-DDDWECVQTLDGHENTVWSLAFDNIGSRLVSC 213 (312)
T ss_pred CCCCEEEEEEECCCCCCCCEEEECCCC-CEEEEECCCCEEEEEEECC-CCCEEEEEEECCCCCEEEEEEECCCCCEEEEE
T ss_conf 788577775504335323479985871-0168821687379975038-98716788855855308999844787667886
Q ss_pred ECCCCCEEEEE
Q ss_conf 71499157999
Q gi|254780548|r 365 KFSGEKFAIGV 375 (447)
Q Consensus 365 ~~~~~~~~i~~ 375 (447)
+.++ .-.|+.
T Consensus 214 sdD~-tv~Iw~ 223 (312)
T KOG0645 214 SDDG-TVSIWR 223 (312)
T ss_pred CCCC-CEEEEE
T ss_conf 4885-067644
No 114
>KOG1273 consensus
Probab=98.18 E-value=0.00055 Score=43.75 Aligned_cols=193 Identities=13% Similarity=0.181 Sum_probs=90.7
Q ss_pred EEEEC-CCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEEC-CC-CCEEEEE---EC
Q ss_conf 12311-4554026886217640234557689984899850346764430377117971799743-79-8524445---51
Q gi|254780548|r 193 LCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN-FR-SMILAPR---FS 266 (447)
Q Consensus 193 l~i~d-~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~-~~-~~~~~p~---wS 266 (447)
+-+-| .+|.-.+++- .. +.+....|.|--+..+.++.-+.. -++.+...+ ..+.+.. .+ ..+.+++ |.
T Consensus 89 i~lwDl~~gs~l~rir-f~-spv~~~q~hp~k~n~~va~~~~~s---p~vi~~s~~-~h~~Lp~d~d~dln~sas~~~fd 162 (405)
T KOG1273 89 IKLWDLLKGSPLKRIR-FD-SPVWGAQWHPRKRNKCVATIMEES---PVVIDFSDP-KHSVLPKDDDGDLNSSASHGVFD 162 (405)
T ss_pred EEEEECCCCCCEEEEE-CC-CCCCEEEECCCCCCEEEEEEECCC---CEEEEECCC-CEEECCCCCCCCCCCCCCCCCCC
T ss_conf 6888626898205888-36-840101413455773799970578---579992697-12555579965544455556305
Q ss_pred CCCCEEEEEECCCCCEEEEEEECCCCCCC---CCCCCCCCCCCEEEECCCCEEEE-EECCCCCCCEEEEE-E----CCCC
Q ss_conf 58955677413787303899840477411---00257764320255216747899-72377653315764-0----2567
Q gi|254780548|r 267 SNGKRALISVQKDEAMDIYSVDLQSNATE---RLTNTLFINISASYSPDSSQIVF-ESDREGKEQLYVMQ-S----NGSD 337 (447)
Q Consensus 267 PDG~~la~~~s~~g~~~I~~~d~~~~~~~---~lT~~~~~d~~p~~spDG~~I~f-~Sdr~G~~qiy~~~-~----~g~~ 337 (447)
+-|+.|.. .+..| .|.+++.++-+.. |+|...+|- +-.++-.|+.+++ +|||--+ .|... + .+++
T Consensus 163 r~g~yIit-GtsKG--kllv~~a~t~e~vas~rits~~~IK-~I~~s~~g~~liiNtsDRvIR--~ye~~di~~~~r~~e 236 (405)
T KOG1273 163 RRGKYIIT-GTSKG--KLLVYDAETLECVASFRITSVQAIK-QIIVSRKGRFLIINTSDRVIR--TYEISDIDDEGRDGE 236 (405)
T ss_pred CCCCEEEE-ECCCC--EEEEEECCHHEEEEEEEECHHEEEE-EEEEECCCCEEEEECCCCEEE--EEEHHHHCCCCCCCC
T ss_conf 88878997-45753--4999954114103123520020030-799702575899834771599--973355304475677
Q ss_pred CCEE------EEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCCC---CCEECCCC
Q ss_conf 4111------2203530000468776888999971499157999988999679966278755---43788789
Q gi|254780548|r 338 QKRI------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ---APTWSPSG 401 (447)
Q Consensus 338 ~~rl------T~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~~~~e---~P~wSPDG 401 (447)
++.. .....++ .--+|-||.+|.-.+ .....||+.....|....+-+|...| ...|-|=-
T Consensus 237 ~e~~~K~qDvVNk~~Wk--~ccfs~dgeYv~a~s--~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~r 305 (405)
T KOG1273 237 VEPEHKLQDVVNKLQWK--KCCFSGDGEYVCAGS--ARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVR 305 (405)
T ss_pred CCHHHHHHHHHHHHHHH--HEEECCCCCEEEECC--CCCEEEEEEECCCCCEEEEECCCCHHHEEECCCCCCE
T ss_conf 57568999987564341--104558855898103--3310689996377622455427760010103544000
No 115
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain; InterPro: IPR013476 Methylamine dehydrogenase is a periplasmic enzyme found in Gram-negative methylotrophs . It is induced when grown on methylamine as a growth substrate and catalyses the oxidative deamination of primary amines to their corresponding aldehydes. ; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0042597 periplasmic space.
Probab=98.17 E-value=0.00058 Score=43.58 Aligned_cols=224 Identities=17% Similarity=0.262 Sum_probs=115.9
Q ss_pred EECCCCCE-EEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEE
Q ss_conf 31145540-26886217640234557689984899850346764430377117971799743798524445515895567
Q gi|254780548|r 195 VMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273 (447)
Q Consensus 195 i~d~DG~n-~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la 273 (447)
++|.|==+ ||.|+-.-+ ...+.|||+|.+.|--|. ..+.|=++||... .-.++-+-|.-. ..-|-.+.-.
T Consensus 97 ~ADI~~P~~PRFL~G~~~---~~~~L~~d~K~lLF~QFs--P~PaVG~VDL~~K-~F~~~~~vPDCY---~IFP~~n~~F 167 (360)
T TIGR02658 97 IADIDLPEGPRFLVGVYP---RMASLSPDNKTLLFYQFS--PSPAVGLVDLEGK-AFVKMLDVPDCY---HIFPTANDTF 167 (360)
T ss_pred EEEEECCCCCEEEEECCC---HHEECCCCCCEEEEEECC--CCCCEEEEECCCC-CEEEEECCCCCC---EEECCCCCCE
T ss_conf 544567888735674121---010135577568898338--8882046884776-401221388864---1306778960
Q ss_pred EEECCCCCEEEEEEECCCCCC-CCCCC--CCC---CCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEE----
Q ss_conf 741378730389984047741-10025--776---43202552167478997237765331576402567411122----
Q gi|254780548|r 274 ISVQKDEAMDIYSVDLQSNAT-ERLTN--TLF---INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ---- 343 (447)
Q Consensus 274 ~~~s~~g~~~I~~~d~~~~~~-~~lT~--~~~---~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~---- 343 (447)
|---+||...=+.++.+|... .+-|. |.. .=..|.||+...+|++-. ..|+ ||-+++....++=|..
T Consensus 168 fMHCRDGSL~~~~~~~~G~~~p~k~T~~FH~E~eyL~~~P~YS~~~grLvWPT-Y~Gk--IfQ~~Ls~~~a~Fl~~~E~f 244 (360)
T TIGR02658 168 FMHCRDGSLLKVGYDSKGNSKPIKPTKVFHKEDEYLINNPAYSNKSGRLVWPT-YEGK--IFQIDLSSKDAKFLKAIEAF 244 (360)
T ss_pred EEEECCCCEEEEEECCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCEECCC-CCCE--EEEEEECCCCCCCCCHHHHH
T ss_conf 68801554033555578871665321553075622443763307888266441-0675--89998446875101044553
Q ss_pred -ECCCCEEEEEECCCC-CEEEEEECCCCCE----------------EEEEEECCCCC-EEEEECCCCCCCCEECCCCCEE
Q ss_conf -035300004687768-8899997149915----------------79999889996-7996627875543788789989
Q gi|254780548|r 344 -DKEASYFDPVWSPQG-DLIAFTKFSGEKF----------------AIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSL 404 (447)
Q Consensus 344 -~~~~~~~~p~wSPdG-~~Iaf~~~~~~~~----------------~i~~~~~~g~~-~~~lt~~~~~e~P~wSPDG~~i 404 (447)
+.. ..-.|.|-| +.|||.+..+.-| -++++|..+|+ .+.+.=++..++-..|-|-+=.
T Consensus 245 T~~E---k~~~WrPGGWQ~vAyH~~~~~iylL~DQR~~w~H~~~SR~~fV~Da~tGkRl~~iel~HEIdsi~VsQD~kP~ 321 (360)
T TIGR02658 245 TDAE---KKDGWRPGGWQQVAYHKARDEIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELKHEIDSIAVSQDAKPL 321 (360)
T ss_pred HHHH---HHCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCEEECEEEECCCCCCC
T ss_conf 3367---7556877873225677214738998612000334565128999967877311002111123205641078884
Q ss_pred EEEEEECCCCCEEEEEEEC-CCCCEEECCCCCC
Q ss_conf 9999508987337999988-9971473367887
Q gi|254780548|r 405 IFSRKKDGDTGSKLYSIDL-NGRNETLINTPAY 436 (447)
Q Consensus 405 ~f~~~~~g~~~~~l~~~~~-~G~~~~~~~~~g~ 436 (447)
+|+-..+.+ .||..|. +|+...-+..-|.
T Consensus 322 LYA~S~~~K---tLf~fda~~Gk~~~~v~~LG~ 351 (360)
T TIGR02658 322 LYALSTEDK---TLFIFDAVTGKELSSVDELGR 351 (360)
T ss_pred EEEEECCCC---EEEEECCCCCCHHHHHHHHCC
T ss_conf 578524873---688863757712343775178
No 116
>KOG1524 consensus
Probab=98.17 E-value=9.4e-05 Score=48.89 Aligned_cols=18 Identities=22% Similarity=0.370 Sum_probs=8.5
Q ss_pred CCEEEEEECCCCCEEEEE
Q ss_conf 852444551589556774
Q gi|254780548|r 258 SMILAPRFSSNGKRALIS 275 (447)
Q Consensus 258 ~~~~~p~wSPDG~~la~~ 275 (447)
|..+.-+|||||.+++..
T Consensus 257 GSifnlsWS~DGTQ~a~g 274 (737)
T KOG1524 257 GSIFNLSWSADGTQATCG 274 (737)
T ss_pred CCEEEEEECCCCCEEECC
T ss_conf 515898876887556203
No 117
>KOG0650 consensus
Probab=98.16 E-value=0.0006 Score=43.49 Aligned_cols=140 Identities=10% Similarity=0.162 Sum_probs=70.4
Q ss_pred EEEECCCCCEEEEEECCCCCEEEEEEECCCCCCC-CCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCC-CC
Q ss_conf 4455158955677413787303899840477411-002577643202552167478997237765331576402567-41
Q gi|254780548|r 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QK 339 (447)
Q Consensus 262 ~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~-~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~-~~ 339 (447)
...|+-+|..|+.++..+++..+++.+|..+..+ .+-...+.-....|.|---+ .|++.+. .+-++|+.-.+ ++
T Consensus 526 ~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~-lfVaTq~---~vRiYdL~kqelvK 601 (733)
T KOG0650 526 QVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPY-LFVATQR---SVRIYDLSKQELVK 601 (733)
T ss_pred EEEEECCCCEEEEECCCCCCCEEEEEECCCCCCCCCHHHCCCCEEEEEECCCCCE-EEEEECC---CEEEEEHHHHHHHH
T ss_conf 0256147866899636787635998710000022855333884468886488736-9997425---06887236789999
Q ss_pred EEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECC--CCCEEEEE-------CC-CCCCCC---EECCCCCEEEE
Q ss_conf 1122035300004687768889999714991579999889--99679966-------27-875543---78878998999
Q gi|254780548|r 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--GSQERLLV-------ED-SNLQAP---TWSPSGRSLIF 406 (447)
Q Consensus 340 rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~--g~~~~~lt-------~~-~~~e~P---~wSPDG~~i~f 406 (447)
.|- .+....+..+.+|.|+.|+..+.++ .+..+|++ ++..+.|- +- .+-..| +-|+||..+||
T Consensus 602 kL~-tg~kwiS~msihp~GDnli~gs~d~---k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vf 677 (733)
T KOG0650 602 KLL-TGSKWISSMSIHPNGDNLILGSYDK---KMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVF 677 (733)
T ss_pred HHH-CCCEEEEEEEECCCCCEEEEECCCC---EEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEE
T ss_conf 884-5774644444448987078843777---069997566765667765215553320013666415664489738999
Q ss_pred EEE
Q ss_conf 995
Q gi|254780548|r 407 SRK 409 (447)
Q Consensus 407 ~~~ 409 (447)
...
T Consensus 678 hg~ 680 (733)
T KOG0650 678 HGM 680 (733)
T ss_pred EEE
T ss_conf 400
No 118
>KOG2048 consensus
Probab=98.15 E-value=0.0002 Score=46.64 Aligned_cols=119 Identities=14% Similarity=0.181 Sum_probs=53.1
Q ss_pred EEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCC---EEEEEECCCCCEEEEEECCCCCEEEEEEECCC
Q ss_conf 345576899848998503467644303771179717997437985---24445515895567741378730389984047
Q gi|254780548|r 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291 (447)
Q Consensus 215 ~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~---~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~ 291 (447)
..-+-||||+.|||.+-. ...||-.........+.+.+.+-. ...-.|+-|+.++++++-.. .++.++++++
T Consensus 386 s~~aiSPdg~~Ia~st~~---~~~iy~L~~~~~vk~~~v~~~~~~~~~a~~i~ftid~~k~~~~s~~~--~~le~~el~~ 460 (691)
T KOG2048 386 SCAAISPDGNLIAISTVS---RTKIYRLQPDPNVKVINVDDVPLALLDASAISFTIDKNKLFLVSKNI--FSLEEFELET 460 (691)
T ss_pred EEECCCCCCCEEEEEECC---CEEEEEECCCCCEEEEEECCCHHHHCCCEEEEEEECCCEEEEEECCC--CEEEEEEECC
T ss_conf 023027887779976200---04799723676434787033523303410168984276699974465--2158987037
Q ss_pred CCCCCCC---CC---CCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEE
Q ss_conf 7411002---57---764320255216747899723776533157640256741112
Q gi|254780548|r 292 NATERLT---NT---LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342 (447)
Q Consensus 292 ~~~~~lT---~~---~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT 342 (447)
...+.+- .. ++| ..-.-||||++|+-.+.++ |||++++++.+.+.|-
T Consensus 461 ps~kel~~~~~~~~~~~I-~~l~~SsdG~yiaa~~t~g---~I~v~nl~~~~~~~l~ 513 (691)
T KOG2048 461 PSFKELKSIQSQAKCPSI-SRLVVSSDGNYIAAISTRG---QIFVYNLETLESHLLK 513 (691)
T ss_pred CCHHHHHCCCCCCCCCCC-EEEEECCCCCEEEEEECCC---EEEEEECCCCEEECCH
T ss_conf 651212113656678854-0678858898799975255---0899984565243020
No 119
>pfam04762 IKI3 IKI3 family. Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation. This region contains WD40 like repeats.
Probab=98.15 E-value=0.00064 Score=43.31 Aligned_cols=15 Identities=7% Similarity=0.257 Sum_probs=8.7
Q ss_pred EEEEEECCCCCEEEE
Q ss_conf 234557689984899
Q gi|254780548|r 214 LFEPRFSPNQQKVAY 228 (447)
Q Consensus 214 ~~sP~wSpDG~~Iay 228 (447)
+..-.|+.|+.-+|.
T Consensus 302 v~~L~Wn~dS~iLAv 316 (918)
T pfam04762 302 VISLEWNSDSEVLAV 316 (918)
T ss_pred EEEEEECCCCCEEEE
T ss_conf 577488899877899
No 120
>KOG0296 consensus
Probab=98.14 E-value=0.00029 Score=45.65 Aligned_cols=113 Identities=12% Similarity=0.135 Sum_probs=50.5
Q ss_pred CCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEE-CCCCCEEEEEECCCCCEEEEEEC
Q ss_conf 55402688621764023455768998489985034676443037711797179974-37985244455158955677413
Q gi|254780548|r 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKRALISVQ 277 (447)
Q Consensus 199 DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~-~~~~~~~~p~wSPDG~~la~~~s 277 (447)
+|.-+-.++.+.+++ ..-.||.||..||- .+-..+|.+....+|.....+. ...++. --.|+|-+.-| ++.+
T Consensus 95 ~ge~~~eltgHKDSV-t~~~FshdgtlLAT----GdmsG~v~v~~~stg~~~~~~~~e~~die-Wl~WHp~a~il-lAG~ 167 (399)
T KOG0296 95 TGEFAGELTGHKDSV-TCCSFSHDGTLLAT----GDMSGKVLVFKVSTGGEQWKLDQEVEDIE-WLKWHPRAHIL-LAGS 167 (399)
T ss_pred CCCCEEEECCCCCCE-EEEEECCCCEEEEE----CCCCCCEEEEECCCCCEEEEEECCCCCEE-EEEECCCCCEE-EEEC
T ss_conf 876026704778706-89887157518985----67776389998146846888405347348-99743565279-8646
Q ss_pred CCCCEEEEEEECCCCCCCCCCCC-CCCCCCEEEECCCCEEEEEE
Q ss_conf 78730389984047741100257-76432025521674789972
Q gi|254780548|r 278 KDEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFES 320 (447)
Q Consensus 278 ~~g~~~I~~~d~~~~~~~~lT~~-~~~d~~p~~spDG~~I~f~S 320 (447)
.+|. +|...+..+..-++-.+ ...-+...|.|||++|+-..
T Consensus 168 ~DGs--vWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy 209 (399)
T KOG0296 168 TDGS--VWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGY 209 (399)
T ss_pred CCCC--EEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 8883--89998898532457338999840251537874589995
No 121
>KOG2110 consensus
Probab=98.11 E-value=0.00078 Score=42.75 Aligned_cols=106 Identities=19% Similarity=0.181 Sum_probs=42.2
Q ss_pred CCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCC-CCCCCCC
Q ss_conf 998489985034676443037711797179974379852444551589556774137873038998404774-1100257
Q gi|254780548|r 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNT 300 (447)
Q Consensus 222 DG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~-~~~lT~~ 300 (447)
++..+||-+- ....+|+++|+.+-+....+..+++...+-+|||||..||-++.++- =|-++....|+ +.+.-.+
T Consensus 140 ~n~ylAyp~s--~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGT--VIRVf~v~~G~kl~eFRRG 215 (391)
T KOG2110 140 ANCYLAYPGS--TTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGT--VIRVFSVPEGQKLYEFRRG 215 (391)
T ss_pred CCCEEEECCC--CCCCEEEEEECCCCEEEEEEEECCCCEEEEEECCCCCEEEEECCCCE--EEEEEECCCCCEEEEEECC
T ss_conf 7726984488--98860899974455052589835884469998899868987145966--9999985785376675077
Q ss_pred --CCCCCCEEEECCCCEEEEEECCCCCCCEEEEE
Q ss_conf --76432025521674789972377653315764
Q gi|254780548|r 301 --LFINISASYSPDSSQIVFESDREGKEQLYVMQ 332 (447)
Q Consensus 301 --~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~ 332 (447)
+..-.+-+||||++.|+-+|+ .+.-+||+++
T Consensus 216 ~~~~~IySL~Fs~ds~~L~~sS~-TeTVHiFKL~ 248 (391)
T KOG2110 216 TYPVSIYSLSFSPDSQFLAASSN-TETVHIFKLE 248 (391)
T ss_pred CEEEEEEEEEECCCCCEEEEECC-CCEEEEEEEC
T ss_conf 34567999997798775898448-9748999831
No 122
>KOG1524 consensus
Probab=98.10 E-value=8.8e-05 Score=49.06 Aligned_cols=134 Identities=15% Similarity=0.263 Sum_probs=68.6
Q ss_pred EEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEE
Q ss_conf 88621764023455768998489985034676443037711797179974379852444551589556774137873038
Q gi|254780548|r 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284 (447)
Q Consensus 205 ~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I 284 (447)
.+.+.. ..+...+|.||...|+|.. + .++++..+.....+-+-..++|...+.+|+|-..-|+ +..+|=.-.|
T Consensus 140 tl~Q~~-~~v~c~~W~p~S~~vl~c~---g--~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~-sgGED~kfKv 212 (737)
T KOG1524 140 TVVQNE-ESIRCARWAPNSNSIVFCQ---G--GHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIA-SGGEDFRFKI 212 (737)
T ss_pred HHHHCC-CEEEEEEECCCCCCEEEEC---C--CEEEEEECCCCCCEEEEECCCCEEEEEECCCCCCCEE-ECCCCEEEEE
T ss_conf 886347-4268998779987269964---8--8288840466662357762586799960476343011-1687505876
Q ss_pred EEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEE
Q ss_conf 9984047741100257764320255216747899723776533157640256741112203530000468776888999
Q gi|254780548|r 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363 (447)
Q Consensus 285 ~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf 363 (447)
| |..|..+-.-..+...-++.+|.||-...+.. . +.-|+.....++...-+|||||..++-
T Consensus 213 W--D~~G~~Lf~S~~~ey~ITSva~npd~~~~v~S------~----------nt~R~~~p~~GSifnlsWS~DGTQ~a~ 273 (737)
T KOG1524 213 W--DAQGANLFTSAAEEYAITSVAFNPEKDYLLWS------Y----------NTARFSSPRVGSIFNLSWSADGTQATC 273 (737)
T ss_pred E--CCCCCCCCCCCHHCCCEEEEEECCCCCEEEEE------E----------EEEEECCCCCCCEEEEEECCCCCEEEC
T ss_conf 3--24686112577000640146506630056410------0----------125643787651589887688755620
No 123
>KOG1523 consensus
Probab=98.10 E-value=0.00013 Score=47.99 Aligned_cols=27 Identities=11% Similarity=0.399 Sum_probs=13.1
Q ss_pred EEECCCCEEEEEECCCCCCCEEEEEECCCC
Q ss_conf 552167478997237765331576402567
Q gi|254780548|r 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSD 337 (447)
Q Consensus 308 ~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~ 337 (447)
.|||+|.+|+|++.-+ -++..|..+..
T Consensus 213 ~fs~sG~~lawv~Hds---~v~~~da~~p~ 239 (361)
T KOG1523 213 LFSPSGNRLAWVGHDS---TVSFVDAAGPS 239 (361)
T ss_pred EECCCCCEEEEECCCC---CEEEEECCCCC
T ss_conf 7678777756752787---15775157970
No 124
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=98.09 E-value=0.00054 Score=43.78 Aligned_cols=155 Identities=14% Similarity=0.184 Sum_probs=82.8
Q ss_pred CCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEE-EECCCCCEEEEEECCCCCEEEEEEE
Q ss_conf 764023455768998489985034676443037711797179974379852444-5515895567741378730389984
Q gi|254780548|r 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEAMDIYSVD 288 (447)
Q Consensus 210 ~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p-~wSPDG~~la~~~s~~g~~~I~~~d 288 (447)
...+..+|.|-|+++.+.|+--. ..+|+.++..+|+. +.. ..++...+. ....+| .|+ ++..+ ++.++
T Consensus 23 ~~~~gEgP~w~~~~~~L~w~DI~---~~~i~r~~~~~g~~-~~~-~~p~~~~~~~~~d~~g-~Lv-~~~~g----~~~~~ 91 (307)
T COG3386 23 GATLGEGPVWDPDRGALLWVDIL---GGRIHRLDPETGKK-RVF-PSPGGFSSGALIDAGG-RLI-ACEHG----VRLLD 91 (307)
T ss_pred CCCCCCCCCCCCCCCEEEEEECC---CCEEEEECCCCCCE-EEE-ECCCCCCCCEEECCCC-EEE-EEECC----CEEEC
T ss_conf 35010176573898869999778---98699927654856-887-5898732110455897-299-98068----66861
Q ss_pred CCCCCC-CCCCCCCC--CCC---CEEEECCCCEEEEEE-C-----CCC-CC--CEEEEEECCCCCCEEEEECCCCEEEEE
Q ss_conf 047741-10025776--432---025521674789972-3-----776-53--315764025674111220353000046
Q gi|254780548|r 289 LQSNAT-ERLTNTLF--INI---SASYSPDSSQIVFES-D-----REG-KE--QLYVMQSNGSDQKRISQDKEASYFDPV 353 (447)
Q Consensus 289 ~~~~~~-~~lT~~~~--~d~---~p~~spDG~~I~f~S-d-----r~G-~~--qiy~~~~~g~~~~rlT~~~~~~~~~p~ 353 (447)
.+.+.. +.++.... .+. .....|||+ |+|.. . ... .+ -||+++.+|+..+.+.... ...+..+
T Consensus 92 ~~~~~~~t~~~~~~~~~~~~r~ND~~v~pdG~-~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~-~~~NGla 169 (307)
T COG3386 92 PDTGGKITLLAEPEDGLPLNRPNDGVVDPDGR-IWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDL-TIPNGLA 169 (307)
T ss_pred CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC-EEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCE-ECCCCEE
T ss_conf 14785058960466788767876511858899-999499766667766677517999879997899704870-2157137
Q ss_pred ECCCCCEEEEEECCCCCEEEEEEECC
Q ss_conf 87768889999714991579999889
Q gi|254780548|r 354 WSPQGDLIAFTKFSGEKFAIGVMKKD 379 (447)
Q Consensus 354 wSPdG~~Iaf~~~~~~~~~i~~~~~~ 379 (447)
|||||+.+.++-.... .|+.++.+
T Consensus 170 ~SpDg~tly~aDT~~~--~i~r~~~d 193 (307)
T COG3386 170 FSPDGKTLYVADTPAN--RIHRYDLD 193 (307)
T ss_pred ECCCCCEEEEECCCCC--EEEEEECC
T ss_conf 9988997999738898--69996057
No 125
>KOG0283 consensus
Probab=98.07 E-value=0.00018 Score=46.99 Aligned_cols=130 Identities=15% Similarity=0.235 Sum_probs=57.4
Q ss_pred CCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEE-----------EEECCC---CCCEEE
Q ss_conf 378730389984047741100257764320255216747899723776533157-----------640256---741112
Q gi|254780548|r 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV-----------MQSNGS---DQKRIS 342 (447)
Q Consensus 277 s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~-----------~~~~g~---~~~rlT 342 (447)
+-||...||- +...++.--++-..+-|+.+|+|||+..+-- .-.|.=.+|. ++...+ .-+|||
T Consensus 429 SLD~KvRiWs--I~d~~Vv~W~Dl~~lITAvcy~PdGk~avIG-t~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rIT 505 (712)
T KOG0283 429 SLDGKVRLWS--ISDKKVVDWNDLRDLITAVCYSPDGKGAVIG-TFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRIT 505 (712)
T ss_pred CCCCCEEEEE--CCCCEEEEEHHHHHHHEEEEECCCCCEEEEE-EECCEEEEEECCCCEEEEEEEEEECCCCCCCCCEEE
T ss_conf 5554168860--5867367603323021268954589768999-843479999856985887656760477544686146
Q ss_pred EECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCC----CCCEECCCCCEEEEEEEECCCCCEEE
Q ss_conf 20353000046877688899997149915799998899967996627875----54378878998999995089873379
Q gi|254780548|r 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL----QAPTWSPSGRSLIFSRKKDGDTGSKL 418 (447)
Q Consensus 343 ~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~~~~----e~P~wSPDG~~i~f~~~~~g~~~~~l 418 (447)
+.+ ..|. .|| .+..++.+. .|-++|.........-.|..+ -..+|+.||++|+.+++. ..-.+
T Consensus 506 -G~Q---~~p~-~~~--~vLVTSnDS---rIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seD---s~VYi 572 (712)
T KOG0283 506 -GLQ---FFPG-DPD--EVLVTSNDS---RIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASED---SWVYI 572 (712)
T ss_pred -EEE---ECCC-CCC--EEEEECCCC---CEEEEECCCHHHHHHHCCCCCCCCCCEEEECCCCCEEEEECCC---CEEEE
T ss_conf -677---5389-987--689961777---3699706531466653143357862146773589879884277---54898
Q ss_pred EEEE
Q ss_conf 9998
Q gi|254780548|r 419 YSID 422 (447)
Q Consensus 419 ~~~~ 422 (447)
|.++
T Consensus 573 W~~~ 576 (712)
T KOG0283 573 WKND 576 (712)
T ss_pred EECC
T ss_conf 7278
No 126
>KOG4497 consensus
Probab=98.04 E-value=4.2e-05 Score=51.24 Aligned_cols=44 Identities=18% Similarity=0.274 Sum_probs=23.3
Q ss_pred EECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEE
Q ss_conf 5768998489985034676443037711797179974379852444551589556774
Q gi|254780548|r 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275 (447)
Q Consensus 218 ~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~ 275 (447)
.|||||..||. .++--...||.+.-..| .+ ..+|||-|+.|++.
T Consensus 185 eWsPdg~~laV--wd~~Leykv~aYe~~lG--~k----------~v~wsP~~qflavG 228 (447)
T KOG4497 185 EWSPDGNWLAV--WDNVLEYKVYAYERGLG--LK----------FVEWSPCNQFLAVG 228 (447)
T ss_pred EECCCCCEEEE--ECCHHHHEEEEEEECCC--EE----------EEEECCCCCEEEEE
T ss_conf 48899968998--41324441003340353--35----------88745656357753
No 127
>KOG1445 consensus
Probab=98.03 E-value=0.00027 Score=45.77 Aligned_cols=75 Identities=15% Similarity=0.144 Sum_probs=34.3
Q ss_pred CCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCC-C---CEEEECCCC
Q ss_conf 303771179717997437985244455158955677413787303899840477411002577643-2---025521674
Q gi|254780548|r 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-I---SASYSPDSS 314 (447)
Q Consensus 239 i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d-~---~p~~spDG~ 314 (447)
|.++|++++...-.+..+.+..++-+|||||+++|-+ -+||. |.+++..++ .+++-.+++.. + .-.|.-||+
T Consensus 702 i~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtV-cKDg~--~rVy~Prs~-e~pv~Eg~gpvgtRgARi~wacdgr 777 (1012)
T KOG1445 702 IELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATV-CKDGT--LRVYEPRSR-EQPVYEGKGPVGTRGARILWACDGR 777 (1012)
T ss_pred EEEEEHHHHHHHHEECCCCCCEEEEEECCCCCCEEEE-ECCCE--EEEECCCCC-CCCCCCCCCCCCCCCEEEEEEECCC
T ss_conf 3430022024452012676754678877887601024-22755--898678778-7753247987667532589995695
Q ss_pred EEE
Q ss_conf 789
Q gi|254780548|r 315 QIV 317 (447)
Q Consensus 315 ~I~ 317 (447)
.|+
T Consensus 778 ~vi 780 (1012)
T KOG1445 778 IVI 780 (1012)
T ss_pred EEE
T ss_conf 899
No 128
>KOG0306 consensus
Probab=98.02 E-value=0.0011 Score=41.66 Aligned_cols=160 Identities=16% Similarity=0.195 Sum_probs=79.2
Q ss_pred EEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCE
Q ss_conf 01231145540268862176402345576899848998503467644303771179717997437985244455158955
Q gi|254780548|r 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271 (447)
Q Consensus 192 ~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~ 271 (447)
.||-.|. +.-.|.++.+ + +..-.|-|.++.|+ +.++ ..++-++|+++..-.+.+..++|...+-+-+||++.
T Consensus 397 kiWn~~t-~kciRTi~~~--y-~l~~~Fvpgd~~Iv-~G~k---~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g 468 (888)
T KOG0306 397 KIWNRDT-LKCIRTITCG--Y-ILASKFVPGDRYIV-LGTK---NGELQVFDLASASLVETIRAHDGAIWSISLSPDNKG 468 (888)
T ss_pred EEEECCC-CCEEEEECCC--C-EEEEEECCCCCEEE-EECC---CCCEEEEEEEHHHHHHHHHCCCCCEEEEEECCCCCC
T ss_conf 9997567-6035774366--0-77787337980699-9603---771689983013445422304553455552688886
Q ss_pred EEEEECCCCCEEEEEEE---CCCCCCCC-CC--CCCC----CC-CCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCE
Q ss_conf 67741378730389984---04774110-02--5776----43-202552167478997237765331576402567411
Q gi|254780548|r 272 ALISVQKDEAMDIYSVD---LQSNATER-LT--NTLF----IN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340 (447)
Q Consensus 272 la~~~s~~g~~~I~~~d---~~~~~~~~-lT--~~~~----~d-~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~r 340 (447)
.+ +.+.|..-.+|..- -..|..++ |. ..+- .| ...++||||+.++- |=-...-.||-+|. -+--
T Consensus 469 ~v-T~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaV-sLLdnTVkVyflDt--lKFf- 543 (888)
T KOG0306 469 FV-TGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAV-SLLDNTVKVYFLDT--LKFF- 543 (888)
T ss_pred EE-EECCCCEEEEEEEEEEECCCCCCCEEEEECCCEEEECCCCEEEEEECCCCCEEEE-EECCCEEEEEEECC--EEEE-
T ss_conf 08-7328737999767999426764210454011207843662789997699848988-73267579999625--1446-
Q ss_pred EE-EECCCCEEEEEECCCCCEEEEE
Q ss_conf 12-2035300004687768889999
Q gi|254780548|r 341 IS-QDKEASYFDPVWSPQGDLIAFT 364 (447)
Q Consensus 341 lT-~~~~~~~~~p~wSPdG~~Iaf~ 364 (447)
|+ ++..-.......|||++.|+-.
T Consensus 544 lsLYGHkLPV~smDIS~DSklivTg 568 (888)
T KOG0306 544 LSLYGHKLPVLSMDISPDSKLIVTG 568 (888)
T ss_pred EEECCCCCCEEEEECCCCCCEEEEC
T ss_conf 5431565643688506886737861
No 129
>KOG0278 consensus
Probab=98.01 E-value=0.00051 Score=43.99 Aligned_cols=194 Identities=17% Similarity=0.241 Sum_probs=108.3
Q ss_pred CCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCC-CEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEC
Q ss_conf 64023455768998489985034676443037711797-17997437985244455158955677413787303899840
Q gi|254780548|r 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR-APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289 (447)
Q Consensus 211 ~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~-~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~ 289 (447)
..|+-+-+||.|.+.|+--. ..+..+|| ++..-+ .++-+..+++..-..-|--..+.|+ +++.++.-.+| |.
T Consensus 100 khivk~~af~~ds~~lltgg--~ekllrvf--dln~p~App~E~~ghtg~Ir~v~wc~eD~~iL-SSadd~tVRLW--D~ 172 (334)
T KOG0278 100 KHIVKAVAFSQDSNYLLTGG--QEKLLRVF--DLNRPKAPPKEISGHTGGIRTVLWCHEDKCIL-SSADDKTVRLW--DH 172 (334)
T ss_pred HHEEEEEEECCCCHHHHCCC--HHHHHHHH--HCCCCCCCHHHHCCCCCCCEEEEEECCCCEEE-EECCCCCEEEE--EE
T ss_conf 32034543135622332064--57665556--32588899066558987604689871586687-60378836878--72
Q ss_pred CCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCC
Q ss_conf 47741100257764320255216747899723776533157640256741112203530000468776888999971499
Q gi|254780548|r 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369 (447)
Q Consensus 290 ~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~ 369 (447)
.+++..+-.+.+...++...|+||+.|. +++-++ |--.+++.=+.-+ .+.-.++..+...+|+-.. |+ -.+.
T Consensus 173 rTgt~v~sL~~~s~VtSlEvs~dG~ilT-ia~gss---V~Fwdaksf~~lK-s~k~P~nV~SASL~P~k~~--fV-aGge 244 (334)
T KOG0278 173 RTGTEVQSLEFNSPVTSLEVSQDGRILT-IAYGSS---VKFWDAKSFGLLK-SYKMPCNVESASLHPKKEF--FV-AGGE 244 (334)
T ss_pred CCCCEEEEEECCCCCCEEEECCCCCEEE-EECCCE---EEEECCCCCCHHH-HCCCCCCCCCCCCCCCCCE--EE-ECCC
T ss_conf 1683787776489986146625897899-952863---6875342232010-1357643002322688743--88-6586
Q ss_pred CEEEEEEECCCCCEEEEE-CCC--CCCCCEECCCCCEEEEEE-EECCCCCEEEEEEEC
Q ss_conf 157999988999679966-278--755437887899899999-508987337999988
Q gi|254780548|r 370 KFAIGVMKKDGSQERLLV-EDS--NLQAPTWSPSGRSLIFSR-KKDGDTGSKLYSIDL 423 (447)
Q Consensus 370 ~~~i~~~~~~g~~~~~lt-~~~--~~e~P~wSPDG~~i~f~~-~~~g~~~~~l~~~~~ 423 (447)
.+.+|.+|-++++++-+. .+. .....+|||||. +|++ .++| ...||.+..
T Consensus 245 d~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE--~yAsGSEDG--TirlWQt~~ 298 (334)
T KOG0278 245 DFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGE--LYASGSEDG--TIRLWQTTP 298 (334)
T ss_pred CEEEEEEECCCCCEEEECCCCCCCCEEEEEECCCCC--EEECCCCCC--EEEEEEECC
T ss_conf 147998733576512001368878447898789982--574037885--189998248
No 130
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=98.01 E-value=0.0012 Score=41.52 Aligned_cols=196 Identities=14% Similarity=0.164 Sum_probs=112.3
Q ss_pred EECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCC
Q ss_conf 57689984899850346764430377117971799743798524445515895567741378730389984047741100
Q gi|254780548|r 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297 (447)
Q Consensus 218 ~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~l 297 (447)
..+|+|+++ |+.-.+ ...|.+.|+.+......+.- ...-..-+++|||+.+.++-...++..++++|..++.+.+-
T Consensus 80 ~v~~~~~~v-yv~~~~--~~~v~vid~~~~~~~~~~~v-G~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~ 155 (381)
T COG3391 80 AVNPAGNKV-YVTTGD--SNTVSVIDTATNTVLGSIPV-GLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTAT 155 (381)
T ss_pred EECCCCCEE-EEECCC--CCCEEEECCCCCEEEEEECC-CCCCCEEEECCCCCEEEEEECCCCCCEEEEEECCCCEEEEE
T ss_conf 626899648-997278--88189973776406634225-88875079768898699982477884599983788648888
Q ss_pred CCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEE------ECCCCEEEEEECCCCCEEEEEECCCCCE
Q ss_conf 2577643202552167478997237765331576402567411122------0353000046877688899997149915
Q gi|254780548|r 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ------DKEASYFDPVWSPQGDLIAFTKFSGEKF 371 (447)
Q Consensus 298 T~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~------~~~~~~~~p~wSPdG~~Iaf~~~~~~~~ 371 (447)
.........-.++|||++++ +.+ .+..-|..++.++....+ .. .+.+. ....++|||+++.........-
T Consensus 156 ~~vG~~P~~~a~~p~g~~vy-v~~-~~~~~v~vi~~~~~~v~~-~~~~~~~~~~~~P-~~i~v~~~g~~~yV~~~~~~~~ 231 (381)
T COG3391 156 IPVGNTPTGVAVDPDGNKVY-VTN-SDDNTVSVIDTSGNSVVR-GSVGSLVGVGTGP-AGIAVDPDGNRVYVANDGSGSN 231 (381)
T ss_pred ECCCCCCCCEEECCCCCEEE-EEE-CCCCEEEEEECCCCEEEC-CCCCCCCCCCCCC-CEEEECCCCCEEEEEECCCCCC
T ss_conf 45888875369889998899-972-799879997077751322-6766334567887-5049888998899995267773
Q ss_pred EEEEEECCCCCEEEE--ECCCC-CCCCEECCCCCEEEEEEEECCCCCEEEEEEECCC
Q ss_conf 799998899967996--62787-5543788789989999950898733799998899
Q gi|254780548|r 372 AIGVMKKDGSQERLL--VEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425 (447)
Q Consensus 372 ~i~~~~~~g~~~~~l--t~~~~-~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G 425 (447)
.+.++|..++..... ..+.. -..-..+|+|+.+ |.....+ ..++++|...
T Consensus 232 ~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~-yv~~~~~---~~V~vid~~~ 284 (381)
T COG3391 232 NVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAA-YVANSQG---GTVSVIDGAT 284 (381)
T ss_pred EEEEEECCCCEEEEEEECCCCCCCCCEEECCCCCEE-EEEECCC---CEEEEEECCC
T ss_conf 389774677417997401466676650668998789-9985689---8488863888
No 131
>COG1462 CsgG Uncharacterized protein involved in formation of curli polymers [Cell envelope biogenesis, outer membrane]
Probab=98.00 E-value=1.4e-05 Score=54.39 Aligned_cols=57 Identities=19% Similarity=0.430 Sum_probs=43.1
Q ss_pred CHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCCCCC--CCHHHHHHCCCCEEEEEEEEE
Q ss_conf 03578999999862017514550865503466761114--577887415621899999740
Q gi|254780548|r 60 ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSI--PRFQDWNSLGAQVLVTGRVIK 118 (447)
Q Consensus 60 ~~~~~i~~ii~~DL~~SG~F~~i~~~~~~~~~~~~~~~--~~f~~W~~~gad~lv~G~i~~ 118 (447)
.++..++.++.+.|..||.|++++++.+.+...+.... .+. . +..|+||+|+|.|+.
T Consensus 69 ~lg~g~s~~LvTaL~~TG~F~VleRe~l~~l~~E~~i~g~~~~-~-~l~GAdy~V~G~IT~ 127 (252)
T COG1462 69 ALGQGASDMLVTALKKTGRFNVLERENLEELLNEAEISGAAQK-Q-QLKGADYVVTGSITQ 127 (252)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCC-C-CCCCCCEEEECCEEE
T ss_conf 3120589999999976498378753449999888886066643-4-246775899743003
No 132
>PRK13615 lipoprotein LpqB; Provisional
Probab=97.99 E-value=0.0011 Score=41.78 Aligned_cols=18 Identities=11% Similarity=0.156 Sum_probs=10.3
Q ss_pred HHHHHHHHHHCCCCCCCC
Q ss_conf 998999997504455554
Q gi|254780548|r 157 TISDDIYQSITGEKGDFN 174 (447)
Q Consensus 157 ~~ad~i~~~ltG~~G~f~ 174 (447)
+++-++...|...+++-.
T Consensus 233 ~m~aQl~~TL~~lp~v~~ 250 (532)
T PRK13615 233 RMKLQLRQSLSNIPSVLD 250 (532)
T ss_pred HHHHHHHHHHHCCCCCCE
T ss_conf 999999999862887622
No 133
>KOG0310 consensus
Probab=97.99 E-value=0.0013 Score=41.27 Aligned_cols=140 Identities=11% Similarity=0.177 Sum_probs=69.9
Q ss_pred EEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCC
Q ss_conf 23455768998489985034676443037711797179974379852444551589556774137873038998404774
Q gi|254780548|r 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293 (447)
Q Consensus 214 ~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~ 293 (447)
+..-.|+|+++.++ ++-.++...++| |+.++....-+..+....-+.+|+|-..+++++.+.||.-.+|-....+..
T Consensus 113 v~~~~f~~~d~t~l-~s~sDd~v~k~~--d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~ 189 (487)
T KOG0310 113 VHVTKFSPQDNTML-VSGSDDKVVKYW--DLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSR 189 (487)
T ss_pred EEEEEECCCCCEEE-EECCCCCEEEEE--ECCCCEEEEEECCCCCEEEEECCCCCCCEEEEECCCCCEEEEEEECCCCCE
T ss_conf 15788526687389-961799669999--737718999842771105751024477718995377852898870357753
Q ss_pred CCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEE--ECCCCEEEEEECCCCCEEE
Q ss_conf 11002577643202552167478997237765331576402567411122--0353000046877688899
Q gi|254780548|r 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIA 362 (447)
Q Consensus 294 ~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~--~~~~~~~~p~wSPdG~~Ia 362 (447)
...|-.+..++ +-.+-|.|..|+- .|.+++-++|+-+|... ++. +..-..-.....-|+..+.
T Consensus 190 v~elnhg~pVe-~vl~lpsgs~ias----AgGn~vkVWDl~~G~ql-l~~~~~H~KtVTcL~l~s~~~rLl 254 (487)
T KOG0310 190 VVELNHGCPVE-SVLALPSGSLIAS----AGGNSVKVWDLTTGGQL-LTSMFNHNKTVTCLRLASDSTRLL 254 (487)
T ss_pred EEEECCCCCEE-EEEECCCCCEEEE----CCCCEEEEEEECCCCEE-HHHHHCCCCEEEEEEEECCCCEEE
T ss_conf 68824999500-4897289887997----58983799995278630-144552464479999606875676
No 134
>PRK12370 invasion protein regulator; Provisional
Probab=97.98 E-value=0.0001 Score=48.60 Aligned_cols=120 Identities=13% Similarity=0.172 Sum_probs=78.6
Q ss_pred CEEEEECCCCCCCCH-HHHHHHHHHHHHHC-CCCEEECCHHHCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEEECCCCEE
Q ss_conf 200463056775303-57899999986201-7514550865503466761114577887415621899999740466225
Q gi|254780548|r 47 PVSIAFTKFVSIDEL-GGKVSEVVSKDLQR-SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124 (447)
Q Consensus 47 pi~IAv~~f~~~~~~-~~~i~~ii~~DL~~-SG~F~~i~~~~~~~~~~~~~~~~~f~~W~~~gad~lv~G~i~~~~~~~~ 124 (447)
.-.|||.||.-.+.. ++.+..-|-..|.+ +.+|-++-++++-........+ ..--+.+|++|++.|++...|+ ++
T Consensus 121 ~~siAVLPFr~~~~~~~d~l~~~II~aLSr~rwl~viar~sSft~~~r~~~Di--~~v~reLgv~Y~L~G~V~~~g~-~v 197 (553)
T PRK12370 121 THTLAILPFQMQDQVQSESLHYSIVKGLSQYAPFGLSVLPVTITKNCRSVKDI--LELMDQLRPDYYISGQMIPDGN-DN 197 (553)
T ss_pred CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHCCCCCCHH--HHHHHHHCCCEEEEEEEEECCC-EE
T ss_conf 86178805522466441222789999875502001577132122037663319--9999984887697546896287-58
Q ss_pred EEEEEEECCCCCCEECCCCCCCCHHHH-HHHHHHHHHHHHHHHCCC
Q ss_conf 789998415554200002323377788-999999989999975044
Q gi|254780548|r 125 RVEFRLWDVKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGE 169 (447)
Q Consensus 125 ~v~~~L~dv~~~~~i~~~~~~~~~~~~-R~~ah~~ad~i~~~ltG~ 169 (447)
.+..+|.|+.++..+++.++.....+. ..+.-+++..+..++.+.
T Consensus 198 rIt~eLiDa~~~~llw~er~d~~~~~~~~~L~~~I~~aL~~~IP~~ 243 (553)
T PRK12370 198 IVQIEIVRVKGYHLLHQESIKLIEHQPASLLQNKIANLLLRCIPGL 243 (553)
T ss_pred EEEEEEEECCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHHHHCCHH
T ss_conf 9999997168874442111125766679999999999998754406
No 135
>KOG1009 consensus
Probab=97.97 E-value=0.00068 Score=43.13 Aligned_cols=71 Identities=11% Similarity=0.185 Sum_probs=49.0
Q ss_pred CEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEE
Q ss_conf 0234557689984899850346764430377117971799743798524445515895567741378730389984
Q gi|254780548|r 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288 (447)
Q Consensus 213 ~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d 288 (447)
.++--+||||+.-++.-+.. + .++++|+..|.....+..+.......+|.|-++.++- .+.+-+++.+..+
T Consensus 125 diydL~Ws~d~~~l~s~s~d--n--s~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s-~s~dr~~~~~~~~ 195 (434)
T KOG1009 125 DIYDLAWSPDSNFLVSGSVD--N--SVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVAS-KSSDRHPEGFSAK 195 (434)
T ss_pred CHHHHHCCCCCCEEEEEECC--C--EEEEEEECCCEEEEECCCCCCCCCEEECCHHHHHHHH-HCCCCCCCEEEEE
T ss_conf 22223106777514661034--3--2799984045167602566542140432644545644-2237665156531
No 136
>KOG0645 consensus
Probab=97.96 E-value=0.0014 Score=40.93 Aligned_cols=197 Identities=15% Similarity=0.214 Sum_probs=103.1
Q ss_pred EEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEE---CCCCCEEEEEECCCCCEEEEEECCCCC
Q ss_conf 88621764023455768998489985034676443037711797179974---379852444551589556774137873
Q gi|254780548|r 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALISVQKDEA 281 (447)
Q Consensus 205 ~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~---~~~~~~~~p~wSPDG~~la~~~s~~g~ 281 (447)
..+.+++.-+-+-+||++|..+|--|. + ..+|+.....+.+...++ .+..-.--..|+|- .-|+|+.+.|..
T Consensus 99 ~~lEGHEnEVK~Vaws~sG~~LATCSR--D--KSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt-~dlL~S~SYDnT 173 (312)
T KOG0645 99 ATLEGHENEVKCVAWSASGNYLATCSR--D--KSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPT-EDLLFSCSYDNT 173 (312)
T ss_pred EEEECCCCCEEEEEECCCCCEEEEEEC--C--CEEEEEEECCCCCEEEEEEECCCCCCCCEEEECCC-CCEEEEECCCCE
T ss_conf 653046551468998489987878408--9--74999995478857777550433532347998587-101688216873
Q ss_pred EEEEEEECCCC--CCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEE--EEECCCCCCEEEEECCCCEEEEEECCC
Q ss_conf 03899840477--41100257764320255216747899723776533157--640256741112203530000468776
Q gi|254780548|r 282 MDIYSVDLQSN--ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQKRISQDKEASYFDPVWSPQ 357 (447)
Q Consensus 282 ~~I~~~d~~~~--~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~--~~~~g~~~~rlT~~~~~~~~~p~wSPd 357 (447)
..+|.-..+.. -...|..+..-.-+-.|.|+|.+++-.||. +.--||+ .++.+-.. ...+...|- +
T Consensus 174 Ik~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD-~tv~Iw~~~~~~~~~~s--------r~~Y~v~W~-~ 243 (312)
T KOG0645 174 IKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDD-GTVSIWRLYTDLSGMHS--------RALYDVPWD-N 243 (312)
T ss_pred EEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEECCC-CCEEEEEECCCCCHHCC--------CCEEEEEEC-C
T ss_conf 7997503898716788855855308999844787667886488-50676440338541016--------625752422-5
Q ss_pred CCEEEEEECCCCCEEEEEEE--CCCCCEEEEEC--CCC-C--CCCEECCCCCEEEEEEEECCCCCEEEEE
Q ss_conf 88899997149915799998--89996799662--787-5--5437887899899999508987337999
Q gi|254780548|r 358 GDLIAFTKFSGEKFAIGVMK--KDGSQERLLVE--DSN-L--QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420 (447)
Q Consensus 358 G~~Iaf~~~~~~~~~i~~~~--~~g~~~~~lt~--~~~-~--e~P~wSPDG~~i~f~~~~~g~~~~~l~~ 420 (447)
..|| +.-.++...+|.-. +++....++.. +.+ + .+..|.|.++-++.+...+|. -.+|.
T Consensus 244 -~~Ia-S~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~--v~~W~ 309 (312)
T KOG0645 244 -GVIA-SGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGI--VNFWE 309 (312)
T ss_pred -CCEE-ECCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCEEECCCCCE--EEEEE
T ss_conf -6057-516887799987348887741888776652244402117976888872666278854--88889
No 137
>KOG0643 consensus
Probab=97.93 E-value=0.0017 Score=40.53 Aligned_cols=143 Identities=15% Similarity=0.143 Sum_probs=59.5
Q ss_pred CEEEEEECCCCCEEEEEEECC-CCCCCCCEEEECCC-------CCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEE
Q ss_conf 023455768998489985034-67644303771179-------7179974379852444551589556774137873038
Q gi|254780548|r 213 ILFEPRFSPNQQKVAYATYDD-EDILRVYLMDTRID-------RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284 (447)
Q Consensus 213 ~~~sP~wSpDG~~Iay~s~~~-~~~~~i~~~~~~~g-------~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I 284 (447)
.+..-.|+++|+.+++++-+. +....|.+++++.. +....+.......-..-|+|-|+.|+ +.-.+|...+
T Consensus 95 ~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~seep~~kI~~~~skit~a~Wg~l~~~ii-~Ghe~G~is~ 173 (327)
T KOG0643 95 PVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETII-AGHEDGSISI 173 (327)
T ss_pred EEEEEEECCCCCEEEEEEHHHCCCCEEEEEEECCCCHHHCCCCCCEEEECCCCCCEEEEEECCCCCEEE-EECCCCCEEE
T ss_conf 157877526996899985343586227999982577323024685699557766400555145677799-8168885878
Q ss_pred EEEECCCCCCC-CC-CCC-CCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEE
Q ss_conf 99840477411-00-257-7643202552167478997237765331576402567411122035300004687768889
Q gi|254780548|r 285 YSVDLQSNATE-RL-TNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361 (447)
Q Consensus 285 ~~~d~~~~~~~-~l-T~~-~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~I 361 (447)
| |+.+|... +- ..+ ..| ..-.+|||....+ ++.+.- +-..+|..+-++.+ |+...-.....++||--+.+
T Consensus 174 ~--Da~~g~~~v~s~~~h~~~I-nd~q~s~d~T~Fi-T~s~Dt--takl~D~~tl~v~K-ty~te~PvN~aaisP~~d~V 246 (327)
T KOG0643 174 Y--DARTGKELVDSDEEHSSKI-NDLQFSRDRTYFI-TGSKDT--TAKLVDVRTLEVLK-TYTTERPVNTAAISPLLDHV 246 (327)
T ss_pred E--ECCCCCEEEECHHHHHCCC-CCCCCCCCCCEEE-ECCCCC--CCEEEECCCEEEEE-EEEECCCCCCCCCCCCCCEE
T ss_conf 8--7136807631111220222-3220067753688-515676--31356301114677-76403542200025664248
Q ss_pred EE
Q ss_conf 99
Q gi|254780548|r 362 AF 363 (447)
Q Consensus 362 af 363 (447)
+.
T Consensus 247 il 248 (327)
T KOG0643 247 IL 248 (327)
T ss_pred EE
T ss_conf 96
No 138
>pfam02239 Cytochrom_D1 Cytochrome D1 heme domain. Cytochrome cd1 (nitrite reductase) catalyses the conversion of nitrite to nitric oxide in the nitrogen cycle. This family represents the d1 heme binding domain of cytochrome cd1, in which His/Tyr side chains ligate the d1 heme iron of the active site in the oxidized state.
Probab=97.92 E-value=0.0017 Score=40.46 Aligned_cols=201 Identities=14% Similarity=0.217 Sum_probs=103.0
Q ss_pred EEEEEECCC-CCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEE-----------EECCCC
Q ss_conf 001231145-54026886217640234557689984899850346764430377117971799-----------743798
Q gi|254780548|r 191 NSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-----------IGNFRS 258 (447)
Q Consensus 191 ~~l~i~d~D-G~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~-----------~~~~~~ 258 (447)
-+||+.|+. ..|.+.-+...+..+.---|.|+++.+.-.++ ..+ .|-+.|...++.... +.+++-
T Consensus 150 geIw~Vdy~d~~~~~~~~i~~~~~lhD~~~d~~~Ryfl~aa~-~~n--ki~vvd~~~~k~v~l~d~gk~~~p~~~~n~pH 226 (369)
T pfam02239 150 GEIWLVDYSDGKNLKTTFIGAAKFLHDGGFDPDGRYFLAAAN-ASD--KIAVWDTKRGKLVALLDTGKTPHPGPGANMPH 226 (369)
T ss_pred CEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEECC-CCC--CEEEEECCCCEEEEEECCCCCCCCCCCCCCCC
T ss_conf 979999787688740158665445646664798879987425-887--06589558880899733686548887489968
Q ss_pred CEEEEEECCCCCEEEEEECCCCCEEEEEEECCC-CCCCCCCCCCCCCCCEEEECCCCEEEEE--ECCCCCCCEEEEEECC
Q ss_conf 524445515895567741378730389984047-7411002577643202552167478997--2377653315764025
Q gi|254780548|r 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFE--SDREGKEQLYVMQSNG 335 (447)
Q Consensus 259 ~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~-~~~~~lT~~~~~d~~p~~spDG~~I~f~--Sdr~G~~qiy~~~~~g 335 (447)
..+.|.|+-+|.....+..-+ ...+-+.+... +.+++|.. .+.-.-..-+||++++.-- ++. ...+|.++|..+
T Consensus 227 ~~~G~vW~~~~~g~~~ip~ig-~~~v~v~d~~~WkvVk~I~~-~G~g~FvkthP~s~~lwvD~~~~p-~~~~v~viD~~t 303 (369)
T pfam02239 227 LEGGPVWTTSHLGDFVTPLIG-TDPVLVHDLQNWKQVKEIDV-AGGGLFVKTHPDSRYLWVDTFLNP-DNDSVAVIDSET 303 (369)
T ss_pred CCCCCEEEECCCCCEEEEECC-CCCCCCCCCCCCEEEEEEEC-CCCCEEEECCCCCCCEEEECCCCC-CCCEEEEEECCC
T ss_conf 887630785687844443146-79777677534469789815-898479876989963898667799-988799998887
Q ss_pred CC-CCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCE-EEEECCCCCCCCEECCCCCEEEE
Q ss_conf 67-4111220353000046877688899997149915799998899967-99662787554378878998999
Q gi|254780548|r 336 SD-QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIF 406 (447)
Q Consensus 336 ~~-~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~-~~lt~~~~~e~P~wSPDG~~i~f 406 (447)
.+ ++.|..........+.|++||+.+.++..++.+ .|.++|..+-++ ..+ |.-+|-|++-+|
T Consensus 304 l~vv~~l~~~~gk~v~H~Ef~~~G~evwvSvw~~~~-aivVyD~~Tlk~~~~i--------~~~tPsGkfNv~ 367 (369)
T pfam02239 304 LEIILPLAPWPGLVVVHMEFNKRGDEVWLSVWDGKG-ALVVYDDKTLKLKKVI--------PLNTPSGKFNVY 367 (369)
T ss_pred CCEEECCCCCCCCCEECCEECCCCCEEEEEEECCCC-EEEEEECCCCEEEEEE--------ECCCCCEEEECC
T ss_conf 527770330489838854199999999999867999-6999989884699999--------826998775224
No 139
>pfam10647 Gmad1 Lipoprotein LpqB beta-propeller domain. The Gmad1 domain is found associated with the GerMN family, pfam10646, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=97.90 E-value=0.0018 Score=40.28 Aligned_cols=194 Identities=18% Similarity=0.237 Sum_probs=100.9
Q ss_pred CCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEE
Q ss_conf 44178875136764421001231145540268862176402345576899848998503467644303771179717997
Q gi|254780548|r 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253 (447)
Q Consensus 174 ~triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~ 253 (447)
..++|+|.... ...||+-...+ ..++++.+. . +..|+|.++| .+ ++.-......++.. ...|.....-
T Consensus 35 ~~~~AaV~~~~-----~~~L~vg~~g~-~~~~~~~g~-~-lt~PSwd~~g-~v-Wtv~~~~~~~r~~~--~~~g~~~~~~ 102 (254)
T pfam10647 35 GQLVAAVATDD-----GSTLYVGPLGG-PATVVLTGR-S-LTRPSWDLDG-WV-WTVGDGDTVARLLR--SATGTTVPVE 102 (254)
T ss_pred CCEEEEEECCC-----CCEEEECCCCC-CCEEEECCC-C-CCCCEECCCC-CE-EEEECCCCEEEEEE--CCCCCEEEEE
T ss_conf 87699993599-----86899726898-745777278-6-4687086999-88-99956997047898--7899616789
Q ss_pred ECCCC----CEEEEEECCCCCEEEEEECCCCCEEEEEEECC---CCCCCCCCCCC-------CCCCCEEEECCCCEEEEE
Q ss_conf 43798----52444551589556774137873038998404---77411002577-------643202552167478997
Q gi|254780548|r 254 GNFRS----MILAPRFSSNGKRALISVQKDEAMDIYSVDLQ---SNATERLTNTL-------FINISASYSPDSSQIVFE 319 (447)
Q Consensus 254 ~~~~~----~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~---~~~~~~lT~~~-------~~d~~p~~spDG~~I~f~ 319 (447)
.+.++ ...+-+.|+||.++|+....++..+||+--+. .+..+.+|.-. ..-++-+|..+++-++-.
T Consensus 103 Vd~~~l~~~~I~~lrvSrDG~R~A~vv~~~~~~~v~va~V~R~~~G~~~~l~~p~~~~~~~~~~v~~~~W~~~~~LvV~~ 182 (254)
T pfam10647 103 VDAPALSAGRITELRVSRDGTRAAVVVERGGGGQVYVAGVERDGGGLPRALTAPLRLAPGLGEPATSLAWRSDDSLVVLG 182 (254)
T ss_pred EECCCCCCCEEEEEEECCCCCEEEEEEEECCCCEEEEEEEEECCCCCEEEEECEEEECCCCCCCEEEEEECCCCEEEEEE
T ss_conf 63443489706899967888689999996899779999998479995467401058326778740165865899899983
Q ss_pred ECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEEC-CCCCEEEEEECCCCCEEEEEEECCCCCEEEE
Q ss_conf 237765331576402567411122035300004687-7688899997149915799998899967996
Q gi|254780548|r 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386 (447)
Q Consensus 320 Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wS-PdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~l 386 (447)
+ ..|.+..|.+..+|+....+.. .+...|.-+ ......+|....++.+++ ...+...+..
T Consensus 183 ~-~~~~~v~~~v~~DGs~~~~lps---~~~~~~v~av~~~~~~~~~t~~~gv~~l---~~~g~~W~~v 243 (254)
T pfam10647 183 R-APGGPVQYEVSVDGSPSTQLPS---GNLGAPVIAVAASPSTVYVTDDGALLQL---SRSGQGWREV 243 (254)
T ss_pred C-CCCCCEEEEEECCCCCCCCCCC---CCCCCCEEEECCCCCEEEEECCCCEEEE---CCCCCCCEEC
T ss_conf 5-8999267899527866766787---7765666885179843899848966994---8999975697
No 140
>KOG0306 consensus
Probab=97.88 E-value=0.002 Score=40.04 Aligned_cols=143 Identities=21% Similarity=0.216 Sum_probs=57.8
Q ss_pred EEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCC
Q ss_conf 23455768998489985034676443037711797179974379852444551589556774137873038998404774
Q gi|254780548|r 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293 (447)
Q Consensus 214 ~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~ 293 (447)
+.+-++|.|..-++ |- .++ .+-+++..+.+..+.++. +...+..|-|.++.|+ +..+.|..++| |+.+..
T Consensus 376 VRsl~vS~d~~~~~--Sg-a~~--SikiWn~~t~kciRTi~~--~y~l~~~Fvpgd~~Iv-~G~k~Gel~vf--dlaS~~ 445 (888)
T KOG0306 376 VRSLCVSSDSILLA--SG-AGE--SIKIWNRDTLKCIRTITC--GYILASKFVPGDRYIV-LGTKNGELQVF--DLASAS 445 (888)
T ss_pred EEEEEEECCCEEEE--EC-CCC--CEEEEECCCCCEEEEECC--CCEEEEEECCCCCEEE-EECCCCCEEEE--EEEHHH
T ss_conf 04789605751355--16-898--389997567603577436--6077787337980699-96037716899--830134
Q ss_pred CCCCC-CCCCCCCCEEEECCCCEEEEEE-CCCCCC--CEEEEEECCCCCCEEE------EECCCCEEEEEECCCCCEEEE
Q ss_conf 11002-5776432025521674789972-377653--3157640256741112------203530000468776888999
Q gi|254780548|r 294 TERLT-NTLFINISASYSPDSSQIVFES-DREGKE--QLYVMQSNGSDQKRIS------QDKEASYFDPVWSPQGDLIAF 363 (447)
Q Consensus 294 ~~~lT-~~~~~d~~p~~spDG~~I~f~S-dr~G~~--qiy~~~~~g~~~~rlT------~~~~~~~~~p~wSPdG~~Iaf 363 (447)
.-..+ .|.+.--+-+-+||++..+-.| |..-.- --++.+..|...+.|. .+-.........||||+.+|.
T Consensus 446 l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaV 525 (888)
T KOG0306 446 LVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAV 525 (888)
T ss_pred HHHHHHCCCCCEEEEEECCCCCCEEEECCCCEEEEEEEEEEECCCCCCCEEEEECCCEEEECCCCEEEEEECCCCCEEEE
T ss_conf 45422304553455552688886087328737999767999426764210454011207843662789997699848988
Q ss_pred EEC
Q ss_conf 971
Q gi|254780548|r 364 TKF 366 (447)
Q Consensus 364 ~~~ 366 (447)
.-.
T Consensus 526 sLL 528 (888)
T KOG0306 526 SLL 528 (888)
T ss_pred EEC
T ss_conf 732
No 141
>KOG2048 consensus
Probab=97.87 E-value=0.0014 Score=40.97 Aligned_cols=153 Identities=20% Similarity=0.269 Sum_probs=82.9
Q ss_pred CEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCC--CCCCCCC--CC-CCEEEECCCCEEEEEECCCCCCCEEEEEE
Q ss_conf 5244455158955677413787303899840477411--0025776--43-20255216747899723776533157640
Q gi|254780548|r 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLF--IN-ISASYSPDSSQIVFESDREGKEQLYVMQS 333 (447)
Q Consensus 259 ~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~--~lT~~~~--~d-~~p~~spDG~~I~f~Sdr~G~~qiy~~~~ 333 (447)
.....+-||||++|+++.-. ...||.+..+. .++ ++-+.+. .+ ..-.|+-|+.+++++|.- .-++....+
T Consensus 384 nIs~~aiSPdg~~Ia~st~~--~~~iy~L~~~~-~vk~~~v~~~~~~~~~a~~i~ftid~~k~~~~s~~--~~~le~~el 458 (691)
T KOG2048 384 NISCAAISPDGNLIAISTVS--RTKIYRLQPDP-NVKVINVDDVPLALLDASAISFTIDKNKLFLVSKN--IFSLEEFEL 458 (691)
T ss_pred CEEEECCCCCCCEEEEEECC--CEEEEEECCCC-CEEEEEECCCHHHHCCCEEEEEEECCCEEEEEECC--CCEEEEEEE
T ss_conf 02023027887779976200--04799723676-43478703352330341016898427669997446--521589870
Q ss_pred CCCCCCEEE---EE-CCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCC--CCCCEECCC-CCEEEE
Q ss_conf 256741112---20-35300004687768889999714991579999889996799662787--554378878-998999
Q gi|254780548|r 334 NGSDQKRIS---QD-KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPS-GRSLIF 406 (447)
Q Consensus 334 ~g~~~~rlT---~~-~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~~~--~e~P~wSPD-G~~i~f 406 (447)
++...+.+- .. ........+-||||++||..+..+ +|+++++.+.+.+.|-.-.. .....++|. -..|+-
T Consensus 459 ~~ps~kel~~~~~~~~~~~I~~l~~SsdG~yiaa~~t~g---~I~v~nl~~~~~~~l~~rln~~vTa~~~~~~~~~~lvv 535 (691)
T KOG2048 459 ETPSFKELKSIQSQAKCPSISRLVVSSDGNYIAAISTRG---QIFVYNLETLESHLLKVRLNIDVTAAAFSPFVRNRLVV 535 (691)
T ss_pred CCCCHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEECCC---EEEEEECCCCEEECCHHCCCCCEEEEECCCCCCCCEEE
T ss_conf 376512121136566788540678858898799975255---08999845652430200058612343216655673799
Q ss_pred EEEECCCCCEEEEEEECC
Q ss_conf 995089873379999889
Q gi|254780548|r 407 SRKKDGDTGSKLYSIDLN 424 (447)
Q Consensus 407 ~~~~~g~~~~~l~~~~~~ 424 (447)
++ . ..++|..|+.
T Consensus 536 at-s----~nQv~efdi~ 548 (691)
T KOG2048 536 AT-S----NNQVFEFDIE 548 (691)
T ss_pred EE-C----CCEEEEEECC
T ss_conf 80-6----9817997435
No 142
>KOG0286 consensus
Probab=97.87 E-value=0.0021 Score=39.84 Aligned_cols=80 Identities=15% Similarity=0.178 Sum_probs=33.8
Q ss_pred CCEEEECCCCCEEEEECCCCCEEEEEECC-CCCEEEEEECCCCCEEEEEEECCCCCCCCC-CCCCCCCCCEEEECCCCEE
Q ss_conf 30377117971799743798524445515-895567741378730389984047741100-2577643202552167478
Q gi|254780548|r 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQI 316 (447)
Q Consensus 239 i~~~~~~~g~~~~~~~~~~~~~~~p~wSP-DG~~la~~~s~~g~~~I~~~d~~~~~~~~l-T~~~~~d~~p~~spDG~~I 316 (447)
.-+.|+++|+.......+.|-..+-+.+| |++.. .+.+-|....|| |+..+...|- .-+.+.-.+..|.|+|..+
T Consensus 168 CalWDie~g~~~~~f~GH~gDV~sl~l~p~~~ntF-iSg~cD~~A~lW--D~R~~~~~qtF~ghesDINsv~ffP~G~af 244 (343)
T KOG0286 168 CALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTF-VSGGCDKSAKLW--DVRSGQCVQTFEGHESDINSVRFFPSGDAF 244 (343)
T ss_pred EEEEECCCCEEEEEECCCCCCEEEEECCCCCCCEE-EECCCCCCEEEE--ECCCCCEEEEECCCCCCCCEEEECCCCCCE
T ss_conf 99887432638887438754379995278888736-964445413455--326765267622664554027972688704
Q ss_pred EEEEC
Q ss_conf 99723
Q gi|254780548|r 317 VFESD 321 (447)
Q Consensus 317 ~f~Sd 321 (447)
+--||
T Consensus 245 atGSd 249 (343)
T KOG0286 245 ATGSD 249 (343)
T ss_pred EECCC
T ss_conf 63377
No 143
>KOG0284 consensus
Probab=97.84 E-value=0.00018 Score=46.98 Aligned_cols=152 Identities=15% Similarity=0.243 Sum_probs=76.3
Q ss_pred EEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCC-
Q ss_conf 4557689984899850346764430377117971799743798524445515895567741378730389984047741-
Q gi|254780548|r 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT- 294 (447)
Q Consensus 216 sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~- 294 (447)
--+|||.-.+ |++..+++..+| .|..-....++|..+.-..-+..|+|- +.|+++.++|.--.+| |..+|..
T Consensus 185 dlafSpnDsk--F~t~SdDg~iki--Wdf~~~kee~vL~GHgwdVksvdWHP~-kgLiasgskDnlVKlW--DprSg~cl 257 (464)
T KOG0284 185 DLAFSPNDSK--FLTCSDDGTIKI--WDFRMPKEERVLRGHGWDVKSVDWHPT-KGLIASGSKDNLVKLW--DPRSGSCL 257 (464)
T ss_pred EECCCCCCCE--EEEECCCCEEEE--EECCCCCHHHEECCCCCCCCEECCCCC-CCEEEECCCCCEEEEE--CCCCCCHH
T ss_conf 0003788761--688527981899--843678623300158877611225775-4236773578536766--58872035
Q ss_pred CCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEE
Q ss_conf 10025776432025521674789972377653315764025674111220353000046877688899997149915799
Q gi|254780548|r 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374 (447)
Q Consensus 295 ~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~ 374 (447)
-.|-.+.....+..|+|+|.+++-.| |.-. +-+.|...-+.-+...+....+.+..|+|--..|.-+.-.+|....+
T Consensus 258 ~tlh~HKntVl~~~f~~n~N~Llt~s-kD~~--~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~ 334 (464)
T KOG0284 258 ATLHGHKNTVLAVKFNPNGNWLLTGS-KDQS--CKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHW 334 (464)
T ss_pred HHHHHCCCEEEEEEECCCCCEEEECC-CCCE--EEEEEHHHHHHHHHHHCCHHHHEEECCCCCCCCCEEECCCCCCEEEE
T ss_conf 56540333179999768988557715-7743--78885167688877643311310201110463202313577756899
Q ss_pred EEE
Q ss_conf 998
Q gi|254780548|r 375 VMK 377 (447)
Q Consensus 375 ~~~ 377 (447)
++.
T Consensus 335 ~v~ 337 (464)
T KOG0284 335 VVG 337 (464)
T ss_pred ECC
T ss_conf 636
No 144
>KOG0771 consensus
Probab=97.83 E-value=0.00091 Score=42.29 Aligned_cols=139 Identities=21% Similarity=0.263 Sum_probs=70.2
Q ss_pred EEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCC--CEEEEEECCCC---CEEEEEE-CCCCCEEEEEEEC
Q ss_conf 4557689984899850346764430377117971799743798--52444551589---5567741-3787303899840
Q gi|254780548|r 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS--MILAPRFSSNG---KRALISV-QKDEAMDIYSVDL 289 (447)
Q Consensus 216 sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~--~~~~p~wSPDG---~~la~~~-s~~g~~~I~~~d~ 289 (447)
--.|||||+.|||++- +..+|| ++.+|......+++.. +-..-+|+-|+ .-.+++. ...+....+...+
T Consensus 191 DL~FS~dgk~lasig~---d~~~VW--~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~ 265 (398)
T KOG0771 191 DLDFSPDGKFLASIGA---DSARVW--SVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISL 265 (398)
T ss_pred CCEECCCCCEEEEECC---CCEEEE--EECCCCHHHHCCCCCCCHHHHHCEECCCCCCCEEEEEEECCCCCCEEEEEEEE
T ss_conf 3110788738999548---825899--80568602114876643043311101248775489998617888446887545
Q ss_pred CCC----CCCCCCCCC-CCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECC---CCEEEEEECCCCCEE
Q ss_conf 477----411002577-643202552167478997237765331576402567411122035---300004687768889
Q gi|254780548|r 290 QSN----ATERLTNTL-FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE---ASYFDPVWSPQGDLI 361 (447)
Q Consensus 290 ~~~----~~~~lT~~~-~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~---~~~~~p~wSPdG~~I 361 (447)
-.+ ..++.+... +| ++-.-|+||+.++--+. .|.--|| ++. ..+++-+-.. .......++||-+..
T Consensus 266 w~~~~~l~~~~~~~~~~si-Ssl~VS~dGkf~AlGT~-dGsVai~--~~~--~lq~~~~vk~aH~~~VT~ltF~Pdsr~~ 339 (398)
T KOG0771 266 WSGSNFLRLRKKIKRFKSI-SSLAVSDDGKFLALGTM-DGSVAIY--DAK--SLQRLQYVKEAHLGFVTGLTFSPDSRYL 339 (398)
T ss_pred ECCCCCCCHHHHHHCCCCC-EEEEECCCCCEEEEECC-CCCEEEE--EEC--EEEEEEEEHHHHEEEEEEEEECCCCCCC
T ss_conf 3266422011233125750-36887588847998606-7858999--900--0055675132402056668986775754
Q ss_pred EEEE
Q ss_conf 9997
Q gi|254780548|r 362 AFTK 365 (447)
Q Consensus 362 af~~ 365 (447)
+=++
T Consensus 340 ~svS 343 (398)
T KOG0771 340 ASVS 343 (398)
T ss_pred CCCC
T ss_conf 3235
No 145
>KOG2110 consensus
Probab=97.78 E-value=0.00082 Score=42.59 Aligned_cols=187 Identities=12% Similarity=0.124 Sum_probs=88.2
Q ss_pred CCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEE--ECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEE
Q ss_conf 4417887513676442100123114554026886--21764023455768998489985034676443037711797179
Q gi|254780548|r 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251 (447)
Q Consensus 174 ~triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~--~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~ 251 (447)
..-+||=..+. ..++.+.|. -|.++++ .-++..+..-+|||||..||=.| +++ .-|-++.+..|++
T Consensus 141 n~ylAyp~s~t-----~GdV~l~d~--~nl~~v~~I~aH~~~lAalafs~~G~llATAS-eKG--TVIRVf~v~~G~k-- 208 (391)
T KOG2110 141 NCYLAYPGSTT-----SGDVVLFDT--INLQPVNTINAHKGPLAALAFSPDGTLLATAS-EKG--TVIRVFSVPEGQK-- 208 (391)
T ss_pred CCEEEECCCCC-----CCEEEEEEC--CCCEEEEEEEECCCCEEEEEECCCCCEEEEEC-CCC--EEEEEEECCCCCE--
T ss_conf 72698448898-----860899974--45505258983588446999889986898714-596--6999998578537--
Q ss_pred EEECCCC-----CEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCE--EEEEECCCC
Q ss_conf 9743798-----524445515895567741378730389984047741100257764320255216747--899723776
Q gi|254780548|r 252 RIGNFRS-----MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ--IVFESDREG 324 (447)
Q Consensus 252 ~~~~~~~-----~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~--I~f~Sdr~G 324 (447)
+..|.. ...+-+||||++.|+.+ +..+.-+||.++... ..+.- .+. .|.|-... .+++| . =
T Consensus 209 -l~eFRRG~~~~~IySL~Fs~ds~~L~~s-S~TeTVHiFKL~~~~--~~~~~-~p~-----~~~~~~~~~sk~~~s-y-l 276 (391)
T KOG2110 209 -LYEFRRGTYPVSIYSLSFSPDSQFLAAS-SNTETVHIFKLEKVS--NNPPE-SPT-----AGTSWFGKVSKAATS-Y-L 276 (391)
T ss_pred -EEEEECCCEEEEEEEEEECCCCCEEEEE-CCCCEEEEEEECCCC--CCCCC-CCC-----CCCCCCCHHHHHHHH-H-C
T ss_conf -6675077345679999977987758984-489748999831454--58988-888-----787522032444654-1-5
Q ss_pred CCCEEEE-EECC-CCCCEEEEECCCCEEEEEECC--CCCEEEEEECCCCCEEEEEEECC-CCCEEEEE
Q ss_conf 5331576-4025-674111220353000046877--68889999714991579999889-99679966
Q gi|254780548|r 325 KEQLYVM-QSNG-SDQKRISQDKEASYFDPVWSP--QGDLIAFTKFSGEKFAIGVMKKD-GSQERLLV 387 (447)
Q Consensus 325 ~~qiy~~-~~~g-~~~~rlT~~~~~~~~~p~wSP--dG~~Iaf~~~~~~~~~i~~~~~~-g~~~~~lt 387 (447)
-.||-.+ +.+- =...+|...+..+ .-.+++ +...+ ++...+|.+..|.+++. ||+-.++-
T Consensus 277 ps~V~~~~~~~R~FAt~~l~~s~~~~--~~~l~~~~~~~~v-~vas~dG~~y~y~l~~~~gGec~lik 341 (391)
T KOG2110 277 PSQVSSVLDQSRKFATAKLPESGRKN--ICSLSSIQKIPRV-LVASYDGHLYSYRLPPKEGGECALIK 341 (391)
T ss_pred CHHHHHHHHHHHHEEEEECCCCCCCC--EEEEECCCCCCEE-EEEECCCEEEEEECCCCCCCEEEEEE
T ss_conf 04456665020121388746887434--4885126888779-99974875899972788896048887
No 146
>KOG2394 consensus
Probab=97.78 E-value=0.00033 Score=45.20 Aligned_cols=66 Identities=21% Similarity=0.359 Sum_probs=29.7
Q ss_pred EEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEE
Q ss_conf 55768998489985034676443037711797179974379852444551589556774137873038998
Q gi|254780548|r 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287 (447)
Q Consensus 217 P~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~ 287 (447)
-+|||||+.+|-||. +..-+||-++. -+..-..-++=|.-....||||||.|+. -.+|.--.+|.+
T Consensus 296 f~FS~DG~~LA~VSq--DGfLRvF~fdt--~eLlg~mkSYFGGLLCvcWSPDGKyIvt-GGEDDLVtVwSf 361 (636)
T KOG2394 296 FAFSPDGKYLATVSQ--DGFLRIFDFDT--QELLGVMKSYFGGLLCVCWSPDGKYIVT-GGEDDLVTVWSF 361 (636)
T ss_pred EEECCCCCEEEEEEC--CCEEEEEECCH--HHHHHHHHHHCCCEEEEEECCCCCEEEE-CCCCCEEEEEEE
T ss_conf 467688866899714--76689863337--9887778865062379997688637873-477654899872
No 147
>KOG0639 consensus
Probab=97.76 E-value=0.0013 Score=41.31 Aligned_cols=177 Identities=11% Similarity=0.189 Sum_probs=93.6
Q ss_pred CEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCC--CEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECC
Q ss_conf 023455768998489985034676443037711797--179974379852444551589556774137873038998404
Q gi|254780548|r 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR--APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290 (447)
Q Consensus 213 ~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~--~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~ 290 (447)
.+.+-..+|||+.+.. ++....+-++|+++-. ....++...-...+-+.|||. +++|+.-.+|+.-|| |+.
T Consensus 467 yiRSckL~pdgrtLiv----GGeastlsiWDLAapTprikaeltssapaCyALa~spDa-kvcFsccsdGnI~vw--DLh 539 (705)
T KOG0639 467 YIRSCKLLPDGRTLIV----GGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDA-KVCFSCCSDGNIAVW--DLH 539 (705)
T ss_pred CEEEEEECCCCCEEEE----CCCCCEEEEEECCCCCCCHHHHCCCCCHHHHHHHCCCCC-CEEEEECCCCCEEEE--ECC
T ss_conf 0014675588864785----352110454312589852121167754224553248763-201232067868898--714
Q ss_pred CCC-CCCCCCCCCCCCCEEEECCCCEEEEEECCCCCC-CEEEEEECCC-CCCEEEEECCCCEEEEEECCCCCEEEEEECC
Q ss_conf 774-110025776432025521674789972377653-3157640256-7411122035300004687768889999714
Q gi|254780548|r 291 SNA-TERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367 (447)
Q Consensus 291 ~~~-~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~-qiy~~~~~g~-~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~ 367 (447)
... ++++-.+..--..-..|+||.+|- + +|-- -+--.|+..+ +..+ .+......+...+|.|+|++. .+.
T Consensus 540 nq~~VrqfqGhtDGascIdis~dGtklW-T---GGlDntvRcWDlregrqlqq--hdF~SQIfSLg~cP~~dWlav-GMe 612 (705)
T KOG0639 540 NQTLVRQFQGHTDGASCIDISKDGTKLW-T---GGLDNTVRCWDLREGRQLQQ--HDFSSQIFSLGYCPTGDWLAV-GME 612 (705)
T ss_pred CCEEEECCCCCCCCCEEEEECCCCCEEE-C---CCCCCCEEEHHHHHHHHHHH--HHHHHHHEECCCCCCCCCEEE-ECC
T ss_conf 6324421568888862588558874000-3---78754121011453212554--004666222666898662245-214
Q ss_pred CCCEEEEEEECCCCCEEEEECCC-CCCCCEECCCCCEEE
Q ss_conf 99157999988999679966278-755437887899899
Q gi|254780548|r 368 GEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLI 405 (447)
Q Consensus 368 ~~~~~i~~~~~~g~~~~~lt~~~-~~e~P~wSPDG~~i~ 405 (447)
++ ++.++...+.+.-+|+-.- -.-+-.|++=|++.+
T Consensus 613 ns--~vevlh~skp~kyqlhlheScVLSlKFa~cGkwfv 649 (705)
T KOG0639 613 NS--NVEVLHTSKPEKYQLHLHESCVLSLKFAYCGKWFV 649 (705)
T ss_pred CC--CEEEEECCCCCCEEECCCCCEEEEEEECCCCCEEE
T ss_conf 67--47987517861123112331799987425676664
No 148
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.76 E-value=0.0031 Score=38.69 Aligned_cols=161 Identities=16% Similarity=0.198 Sum_probs=89.6
Q ss_pred EEEEEECCCCCEEEEEECC-CCC----EEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEE-
Q ss_conf 2444551589556774137-873----0389984047741100257764320255216747899723776533157640-
Q gi|254780548|r 260 ILAPRFSSNGKRALISVQK-DEA----MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS- 333 (447)
Q Consensus 260 ~~~p~wSPDG~~la~~~s~-~g~----~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~- 333 (447)
..+.+.|+||+.+|-+... .+. ..|++=.+ ++.......... =+.|+|.+||+.+--+-| |. ++-++-.
T Consensus 351 ~~saavS~d~~~~AaV~~~~~~~~~~~~~L~~G~~-gg~~~~~l~~~t-LTrPSW~~~~d~~WtV~D--G~-~vvR~~r~ 425 (590)
T PRK13616 351 QTSAALSRSGNVVAAVVTLGRGAPDPAASLWVGAL-GGEAVQVLEGHS-LTRPSWSLDADALWVVVD--GN-TVVRVIRS 425 (590)
T ss_pred EEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCC-CCCCCEEECCCC-CCCCCCCCCCCEEEEEEC--CC-CEEEEEEC
T ss_conf 35899858888589998437788764127860588-887411104775-467727789966999933--98-24898831
Q ss_pred -CCCCCCEE-------EEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEC----C-CCCC---CCEE
Q ss_conf -25674111-------22035300004687768889999714991579999889996799662----7-8755---4378
Q gi|254780548|r 334 -NGSDQKRI-------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----D-SNLQ---APTW 397 (447)
Q Consensus 334 -~g~~~~rl-------T~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~----~-~~~e---~P~w 397 (447)
.+|++.++ +....+.......|.||-+||++- +|+-.|..+...+.....|++ . ...+ +-+|
T Consensus 426 ~~~G~~~~~~Vd~~~l~~~~~g~Is~lRlS~DGvR~A~iv--dG~v~vg~V~r~~~G~~~l~~~r~~~p~l~~~a~sl~W 503 (590)
T PRK13616 426 PATGQPARIPVDSSAVASRFPGPISELQLSRDGVRAAMII--DGKVYLAVVEQTQPGQYALTYPRELGFGLGETAVSLSW 503 (590)
T ss_pred CCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEE--CCEEEEEEEEECCCCCEEEEEHHHHCCCCCCCEEEEEE
T ss_conf 7888437775011024656898346999778860799998--89899999982699857875415417454684577355
Q ss_pred CCCCCEEEEEEEECCCCCEEEEEEECCCCCEEEC
Q ss_conf 8789989999950898733799998899714733
Q gi|254780548|r 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431 (447)
Q Consensus 398 SPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~~~ 431 (447)
++|++-++ .+ ..+. ..++.+..||+....+
T Consensus 504 ~~~~~LvV-g~-~~~~--~pv~~V~~DGs~~s~~ 533 (590)
T PRK13616 504 RTGDDILV-GR-SDPD--HPVWYVNLDGSNASDL 533 (590)
T ss_pred CCCCEEEE-EE-ECCC--CEEEEEEECCCCCCCC
T ss_conf 58986999-70-1698--7259998078666678
No 149
>KOG1920 consensus
Probab=97.73 E-value=0.0035 Score=38.40 Aligned_cols=12 Identities=17% Similarity=0.282 Sum_probs=6.6
Q ss_pred EEECCCCCEEEE
Q ss_conf 557689984899
Q gi|254780548|r 217 PRFSPNQQKVAY 228 (447)
Q Consensus 217 P~wSpDG~~Iay 228 (447)
-+|-|.|.+||-
T Consensus 247 LsWkPsgs~iA~ 258 (1265)
T KOG1920 247 LSWKPSGSLIAA 258 (1265)
T ss_pred EEECCCCCEEEE
T ss_conf 346577876765
No 150
>KOG0277 consensus
Probab=97.71 E-value=0.0011 Score=41.68 Aligned_cols=238 Identities=13% Similarity=0.185 Sum_probs=130.1
Q ss_pred CCCCCEEEEEECCCCCCCCEEEEEECCC-CCEEEEEE--ECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCC-
Q ss_conf 5544178875136764421001231145-54026886--2176402345576899848998503467644303771179-
Q gi|254780548|r 172 DFNSRILFVSESVVSGIIKNSLCVMDRD-GANIRYLT--PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID- 247 (447)
Q Consensus 172 ~f~triafv~~~~~~~~~~~~l~i~d~D-G~n~~~l~--~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g- 247 (447)
++.+|+|-...+.-.-...-+|+|-|.+ +...+.+- .-.+ -++--+||+.-..++++.- +.+. +-++|+.-.
T Consensus 19 f~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D-~LfdV~Wse~~e~~~~~a~-GDGS--Lrl~d~~~~s 94 (311)
T KOG0277 19 FVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTED-GLFDVAWSENHENQVIAAS-GDGS--LRLFDLTMPS 94 (311)
T ss_pred CCCCHHHEEEHHHCCCCCCCEEEEEECCCCCCEEEEEEEECCC-CEEEEEECCCCCCEEEEEE-CCCE--EEEECCCCCC
T ss_conf 4456221000433042368559999527888727887554166-0267653677733489982-5963--8986068887
Q ss_pred CCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECC-CCEEEEEECCCCCC
Q ss_conf 71799743798524445515895567741378730389984047741100257764320255216-74789972377653
Q gi|254780548|r 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD-SSQIVFESDREGKE 326 (447)
Q Consensus 248 ~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spD-G~~I~f~Sdr~G~~ 326 (447)
........++....+..|++--+++.++++-||...||..+... .++..+.+...-....|||. +.-++.+|. .|.-
T Consensus 95 ~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~-Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sg-d~~l 172 (311)
T KOG0277 95 KPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPN-SVQTFNGHNSCIYQAAFSPHIPNLFASASG-DGTL 172 (311)
T ss_pred CCHHHHHHHHHHEEEECCCCCCCEEEEEECCCCCEEEECCCCCC-CEEEECCCCCEEEEEECCCCCCCEEEECCC-CCEE
T ss_conf 61068886343269855663023268861357706831389875-147623776179988617788884788048-8528
Q ss_pred CEEEEEECCCCCCEEEEECCC-CEEEEEECCCCCEEEEEECCCCCEEEEEEECCC--CCEEEEECCC-CCCCCEECCCCC
Q ss_conf 315764025674111220353-000046877688899997149915799998899--9679966278-755437887899
Q gi|254780548|r 327 QLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG--SQERLLVEDS-NLQAPTWSPSGR 402 (447)
Q Consensus 327 qiy~~~~~g~~~~rlT~~~~~-~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g--~~~~~lt~~~-~~e~P~wSPDG~ 402 (447)
.||-++..|...- | +... ....-.|+.=...++++...++. |+..|+.. .+.-.|...+ -.....|||--.
T Consensus 173 ~lwdvr~~gk~~~-i--~ah~~Eil~cdw~ky~~~vl~Tg~vd~~--vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~ 247 (311)
T KOG0277 173 RLWDVRSPGKFMS-I--EAHNSEILCCDWSKYNHNVLATGGVDNL--VRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHA 247 (311)
T ss_pred EEEEECCCCCEEE-E--EECCCEEEEECCCCCCCCEEEECCCCCE--EEEEEHHHCCCCCEEECCCCEEEEEEECCCCHH
T ss_conf 9877037996367-8--7055406760321368748996377861--899751121665313327706999986286256
Q ss_pred EEEEEEEECCCCCEEEEEEE
Q ss_conf 89999950898733799998
Q gi|254780548|r 403 SLIFSRKKDGDTGSKLYSID 422 (447)
Q Consensus 403 ~i~f~~~~~g~~~~~l~~~~ 422 (447)
.|+-+...+ ....||...
T Consensus 248 ~lLaSasYD--mT~riw~~~ 265 (311)
T KOG0277 248 SLLASASYD--MTVRIWDPE 265 (311)
T ss_pred HHHHHCCCC--CEEEECCCC
T ss_conf 676524665--068851566
No 151
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.69 E-value=0.0039 Score=38.06 Aligned_cols=209 Identities=12% Similarity=0.131 Sum_probs=101.3
Q ss_pred CCCEEEEEECCCCCCCCEEEEEECC-CCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCC-CCCCCCEEEECC-CCCE
Q ss_conf 4417887513676442100123114-554026886217640234557689984899850346-764430377117-9717
Q gi|254780548|r 174 NSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRI-DRAP 250 (447)
Q Consensus 174 ~triafv~~~~~~~~~~~~l~i~d~-DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~-~~~~i~~~~~~~-g~~~ 250 (447)
.+.+||.... .++..+.|.+-|. +|.- +-..-..+..+-+|.+||+.+.|++-... ...++|-..+.+ ....
T Consensus 140 ~~~la~s~D~--~G~e~y~lr~kdL~tg~~---~~d~i~~~~~~~~Wa~d~~tlfYt~~d~~~rp~kv~~h~~gt~~~~d 214 (682)
T COG1770 140 HNLLAYSVDV--LGDEQYTLRFKDLATGEE---LPDEITNTSGSFAWAADGKTLFYTRLDENHRPDKVWRHRLGTPGSSD 214 (682)
T ss_pred CCEEEEEEEC--CCCEEEEEEEEECCCCCC---CCHHHCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEEECCCCCCCC
T ss_conf 8669999814--675189999998665562---31222265552499578977999996788994048988448887762
Q ss_pred EEEECCCC--CEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCC--CCCC-CCCCCCC--------------------
Q ss_conf 99743798--524445515895567741378730389984047741--1002-5776432--------------------
Q gi|254780548|r 251 KRIGNFRS--MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLT-NTLFINI-------------------- 305 (447)
Q Consensus 251 ~~~~~~~~--~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~--~~lT-~~~~~d~-------------------- 305 (447)
+++-.-+. .-.+..=|-..+.|++.......+++++++.+.... +.+. ...+++.
T Consensus 215 ~lvyeE~d~~f~~~v~~s~s~~yi~i~~~~~~tsE~~ll~a~~p~~~p~vv~pr~~g~eY~~eh~~d~f~i~sN~~gknf 294 (682)
T COG1770 215 ELVYEEKDDRFFLSVGRSRSEAYIVISLGSHITSEVRLLDADDPEAEPKVVLPRENGVEYSVEHGGDRFYILSNADGKNF 294 (682)
T ss_pred EEEEECCCCCEEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCCE
T ss_conf 48897179848999754267765999837875046999855789875589987578847755416868999946888743
Q ss_pred ----CEE------EE-----CC----------CCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCC-CEE-EEEECCCC
Q ss_conf ----025------52-----16----------74789972377653315764025674111220353-000-04687768
Q gi|254780548|r 306 ----SAS------YS-----PD----------SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-SYF-DPVWSPQG 358 (447)
Q Consensus 306 ----~p~------~s-----pD----------G~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~-~~~-~p~wSPdG 358 (447)
.|. |- ++ .+.|+..-.+.|.|.|++.+...++.+-|.++... ... ++.--++.
T Consensus 295 ~l~~ap~~~~~~~w~~~I~h~~~~~l~~~~~f~~~lVl~eR~~glp~v~v~~~~~~~~~~i~f~~~ay~~~l~~~~e~~s 374 (682)
T COG1770 295 KLVRAPVSADKSNWRELIPHREDVRLEGVDLFADHLVLLERQEGLPRVVVRDRKTGEERGIAFDDEAYSAGLSGNPEFDS 374 (682)
T ss_pred EEEECCCCCCHHCCEEEECCCCCCEEEEEEEECCEEEEEECCCCCCEEEEEECCCCCEEEEEECCHHHHCCCCCCCCCCC
T ss_conf 79976578883018154046888365446613357999851368745999854788533587164233101357777778
Q ss_pred CEEEE--EECCCCCEEEEEEECCCCCEEEEEC
Q ss_conf 88999--9714991579999889996799662
Q gi|254780548|r 359 DLIAF--TKFSGEKFAIGVMKKDGSQERLLVE 388 (447)
Q Consensus 359 ~~Iaf--~~~~~~~~~i~~~~~~g~~~~~lt~ 388 (447)
+.|-| +++.. .-.++-+|+.+++.++|-.
T Consensus 375 ~~lR~~ysS~tt-P~~~~~~dm~t~er~~Lkq 405 (682)
T COG1770 375 DRLRYSYSSMTT-PATLFDYDMATGERTLLKQ 405 (682)
T ss_pred CCEEEEEECCCC-CCEEEEEECCCCCEEEEEE
T ss_conf 618997512356-6203765616790777875
No 152
>KOG1063 consensus
Probab=97.69 E-value=0.0019 Score=40.09 Aligned_cols=107 Identities=9% Similarity=0.144 Sum_probs=51.6
Q ss_pred ECCCCCEEEEEECCCCCEEEEEEEC-------CCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCC
Q ss_conf 2176402345576899848998503-------467644303771179717997437985244455158955677413787
Q gi|254780548|r 208 PSRDQILFEPRFSPNQQKVAYATYD-------DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280 (447)
Q Consensus 208 ~~~~~~~~sP~wSpDG~~Iay~s~~-------~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g 280 (447)
-+++..+++--|+|+|..|.=.|.+ ......||+-.++-|+.- .+ .+.-.+.-|+|++.-+ .+.++.|
T Consensus 264 ~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~g---g~-a~GF~g~lw~~n~~~i-i~~g~~G 338 (764)
T KOG1063 264 MGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVG---GS-AGGFWGGLWSPNSNVI-IAHGRTG 338 (764)
T ss_pred CCCCCCEEEEEECCCHHHHEECCCCCCEEEEECCCCCCEEEEEEEEECCC---CC-CCCEEEEEECCCCCEE-EEECCCC
T ss_conf 57533057788755021001004676269970277662589999861135---65-5542368983888889-9931567
Q ss_pred CEEEEEEECCCCCCCCC--CC-CCCCCCCEEEECCCCEEEEEE
Q ss_conf 30389984047741100--25-776432025521674789972
Q gi|254780548|r 281 AMDIYSVDLQSNATERL--TN-TLFINISASYSPDSSQIVFES 320 (447)
Q Consensus 281 ~~~I~~~d~~~~~~~~l--T~-~~~~d~~p~~spDG~~I~f~S 320 (447)
.-.+|. +-+.+...++ +. +..-...-.|.|.|+.+.-+|
T Consensus 339 g~hlWk-t~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs 380 (764)
T KOG1063 339 GFHLWK-TKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVS 380 (764)
T ss_pred CEEEEE-CCCCCCEEECCCCCCCCCCCEEEEECCCCCEEEEEC
T ss_conf 379973-167661355354555546602101368887899822
No 153
>KOG0310 consensus
Probab=97.69 E-value=0.004 Score=37.98 Aligned_cols=170 Identities=14% Similarity=0.047 Sum_probs=92.0
Q ss_pred CCCCCCEEEEEECCCCCEEE-EEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEE
Q ss_conf 76442100123114554026-88621764023455768998489985034676443037711797179974379852444
Q gi|254780548|r 185 VSGIIKNSLCVMDRDGANIR-YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263 (447)
Q Consensus 185 ~~~~~~~~l~i~d~DG~n~~-~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p 263 (447)
+++.+..++|.. +++-.+ .|+.+.++ +.+-+|+|-..+|.++ ++-...|-++|+++......-.++.-.....
T Consensus 129 ~sDd~v~k~~d~--s~a~v~~~l~~htDY-VR~g~~~~~~~hivvt---GsYDg~vrl~DtR~~~~~v~elnhg~pVe~v 202 (487)
T KOG0310 129 GSDDKVVKYWDL--STAYVQAELSGHTDY-VRCGDISPANDHIVVT---GSYDGKVRLWDTRSLTSRVVELNHGCPVESV 202 (487)
T ss_pred CCCCCEEEEEEC--CCCEEEEEECCCCCE-EEEECCCCCCCEEEEE---CCCCCEEEEEEECCCCCEEEEECCCCCEEEE
T ss_conf 179966999973--771899984277110-5751024477718995---3778528988703577536882499950048
Q ss_pred EECCCCCEEEEEECCCCCEEEEEEECCC-CCC-CCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEE
Q ss_conf 5515895567741378730389984047-741-10025776432025521674789972377653315764025674111
Q gi|254780548|r 264 RFSSNGKRALISVQKDEAMDIYSVDLQS-NAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341 (447)
Q Consensus 264 ~wSPDG~~la~~~s~~g~~~I~~~d~~~-~~~-~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rl 341 (447)
-+-|.|..||-+ +| +++-+.|+.+ ++. ...-+|.---|+-.+..|+.+++-.| -.|+-.+|. .++.+-+
T Consensus 203 l~lpsgs~iasA---gG-n~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~s-LD~~VKVfd----~t~~Kvv 273 (487)
T KOG0310 203 LALPSGSLIASA---GG-NSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGS-LDRHVKVFD----TTNYKVV 273 (487)
T ss_pred EECCCCCEEEEC---CC-CEEEEEEECCCCEEHHHHHCCCCEEEEEEEECCCCEEEECC-CCCCEEEEE----CCCEEEE
T ss_conf 972898879975---89-83799995278630144552464479999606875676414-566268897----2664899
Q ss_pred -EEECCCCEEEEEECCCCCEEEEEECCCCC
Q ss_conf -22035300004687768889999714991
Q gi|254780548|r 342 -SQDKEASYFDPVWSPQGDLIAFTKFSGEK 370 (447)
Q Consensus 342 -T~~~~~~~~~p~wSPdG~~Iaf~~~~~~~ 370 (447)
++.-.+...+-..|||++.++ ....+|.
T Consensus 274 ~s~~~~~pvLsiavs~dd~t~v-iGmsnGl 302 (487)
T KOG0310 274 HSWKYPGPVLSIAVSPDDQTVV-IGMSNGL 302 (487)
T ss_pred EEEECCCCEEEEEECCCCCEEE-EECCCCE
T ss_conf 9521266403678658983599-9536630
No 154
>pfam07676 PD40 WD40-like Beta Propeller Repeat. This family appears to be related to the pfam00400 repeat This This repeat corresponds to the RIVW repeat identified in cell surface proteins [Adindla et al. Comparative and Functional Genomics 2004; 5:2-16].
Probab=97.67 E-value=2.6e-05 Score=52.62 Aligned_cols=19 Identities=37% Similarity=0.990 Sum_probs=7.5
Q ss_pred CCCEECCCCCEEEEEEEEC
Q ss_conf 5437887899899999508
Q gi|254780548|r 393 QAPTWSPSGRSLIFSRKKD 411 (447)
Q Consensus 393 e~P~wSPDG~~i~f~~~~~ 411 (447)
+.|+|||||+.|+|++.++
T Consensus 12 ~~P~~SpDG~~i~f~s~r~ 30 (37)
T pfam07676 12 GEPSWSPDGKRLAFTSDRG 30 (37)
T ss_pred CCCCCCCCCCEEEEEECCC
T ss_conf 7730978999999995689
No 155
>PRK13614 lipoprotein LpqB; Provisional
Probab=97.67 E-value=0.0043 Score=37.79 Aligned_cols=161 Identities=13% Similarity=0.143 Sum_probs=91.1
Q ss_pred EEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCC----
Q ss_conf 4445515895567741378730389984047741100257764320255216747899723776533157640256----
Q gi|254780548|r 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS---- 336 (447)
Q Consensus 261 ~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~---- 336 (447)
.+|+-|+|++.+++.. .....+|.... ++..+.++.... =+.|+|.++|. +|+.||++...+......+.
T Consensus 346 ~s~a~s~~~~~~A~v~--~~~~~l~~~~~-g~~~~~~~~g~~-Lt~PSwD~~g~--vW~ad~~~~~~~~~~~~~g~~~g~ 419 (573)
T PRK13614 346 ASPAESPVSQTVAFLN--GADTTLYTVSP-GQPARRLTSGST-LTRPSFSPQDW--VWTAGPGASGRIHAYQPTGTAEGA 419 (573)
T ss_pred CCCEECCCCCEEEEEC--CCCCEEEEECC-CCCCEEEECCCC-CCCCCCCCCCC--EEEECCCCCCEEEEECCCCCCCCC
T ss_conf 6522356773599986--88857897248-973047633886-56871869998--798116998507873478765566
Q ss_pred CCCEEEEEC----CCCEEEEEECCCCCEEEEEECCCCCEEEEEE--ECC-CCCEEEEECCC-----CC-CCCEECCCCCE
Q ss_conf 741112203----5300004687768889999714991579999--889-99679966278-----75-54378878998
Q gi|254780548|r 337 DQKRISQDK----EASYFDPVWSPQGDLIAFTKFSGEKFAIGVM--KKD-GSQERLLVEDS-----NL-QAPTWSPSGRS 403 (447)
Q Consensus 337 ~~~rlT~~~----~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~--~~~-g~~~~~lt~~~-----~~-e~P~wSPDG~~ 403 (447)
.....+... .....+...|+||.++|.....+++-.|.+. -.+ .+..+.|+..- .. ..-+|.-+.+-
T Consensus 420 ~~~~v~~~~~wl~g~~I~~lrvSrDG~R~Avv~~~~g~~~l~v~~IvR~~~G~p~~L~~p~~~~~~~~v~~~sW~g~~~L 499 (573)
T PRK13614 420 QAPTVTLTADWLRGRTVKSLRVSREGSRALVISENNGKSSVQVTGIVRNEDGTPRELTAPNTLLADVAVDTGQWVGSSTV 499 (573)
T ss_pred CCCCEEECCCCCCCCEEEEEEECCCCCEEEEEEEECCCEEEEEEEEEECCCCCEEEECCCEECCCCCCCEEEEECCCCEE
T ss_conf 56531304665689777899978886479999974893189999999899995135034410355676101177179889
Q ss_pred EEEEEEECCCCCEEEEEEECCCCCEE
Q ss_conf 99999508987337999988997147
Q gi|254780548|r 404 LIFSRKKDGDTGSKLYSIDLNGRNET 429 (447)
Q Consensus 404 i~f~~~~~g~~~~~l~~~~~~G~~~~ 429 (447)
++-... . ....+.+.++++|....
T Consensus 500 vVl~~~-~-~~~~q~~~v~~~g~~~~ 523 (573)
T PRK13614 500 AVTALS-A-TSNVVPELLSVAAHYPQ 523 (573)
T ss_pred EEEECC-C-CCCEEEEEEECCCCCCC
T ss_conf 999436-8-98134799966787756
No 156
>PRK13614 lipoprotein LpqB; Provisional
Probab=97.63 E-value=0.0048 Score=37.48 Aligned_cols=164 Identities=16% Similarity=0.167 Sum_probs=91.7
Q ss_pred EEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCC-
Q ss_conf 3455768998489985034676443037711797179974379852444551589556774137873038998404774-
Q gi|254780548|r 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA- 293 (447)
Q Consensus 215 ~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~- 293 (447)
.+|+-|+|++.+|+++- ....+|... .|...+.+.... .-..|+|.++| ++ ++...+++..+......+..
T Consensus 346 ~s~a~s~~~~~~A~v~~---~~~~l~~~~--~g~~~~~~~~g~-~Lt~PSwD~~g-~v-W~ad~~~~~~~~~~~~~g~~~ 417 (573)
T PRK13614 346 ASPAESPVSQTVAFLNG---ADTTLYTVS--PGQPARRLTSGS-TLTRPSFSPQD-WV-WTAGPGASGRIHAYQPTGTAE 417 (573)
T ss_pred CCCEECCCCCEEEEECC---CCCEEEEEC--CCCCCEEEECCC-CCCCCCCCCCC-CE-EEECCCCCCEEEEECCCCCCC
T ss_conf 65223567735999868---885789724--897304763388-65687186999-87-981169985078734787655
Q ss_pred ---CCC--CCCC--CC-CCCCEEEECCCCEEEEEECCCCCCCEEEEEE---CCCCCCEEEEEC----CCCEEEEEECCCC
Q ss_conf ---110--0257--76-4320255216747899723776533157640---256741112203----5300004687768
Q gi|254780548|r 294 ---TER--LTNT--LF-INISASYSPDSSQIVFESDREGKEQLYVMQS---NGSDQKRISQDK----EASYFDPVWSPQG 358 (447)
Q Consensus 294 ---~~~--lT~~--~~-~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~---~g~~~~rlT~~~----~~~~~~p~wSPdG 358 (447)
... ++-. .+ .-++-.-|+||-+++.++.++|..+|++..+ ..|.++.|+..- .......+|.-+
T Consensus 418 g~~~~~v~~~~~wl~g~~I~~lrvSrDG~R~Avv~~~~g~~~l~v~~IvR~~~G~p~~L~~p~~~~~~~~v~~~sW~g~- 496 (573)
T PRK13614 418 GAQAPTVTLTADWLRGRTVKSLRVSREGSRALVISENNGKSSVQVTGIVRNEDGTPRELTAPNTLLADVAVDTGQWVGS- 496 (573)
T ss_pred CCCCCCEEECCCCCCCCEEEEEEECCCCCEEEEEEEECCCEEEEEEEEEECCCCCEEEECCCEECCCCCCCEEEEECCC-
T ss_conf 6656531304665689777899978886479999974893189999999899995135034410355676101177179-
Q ss_pred CEEEEEE-CCCCCEEEEEEECCCCCEEEEE
Q ss_conf 8899997-1499157999988999679966
Q gi|254780548|r 359 DLIAFTK-FSGEKFAIGVMKKDGSQERLLV 387 (447)
Q Consensus 359 ~~Iaf~~-~~~~~~~i~~~~~~g~~~~~lt 387 (447)
..|+... ..++..+.+++..+|.....|.
T Consensus 497 ~~LvVl~~~~~~~~q~~~v~~~g~~~~~l~ 526 (573)
T PRK13614 497 STVAVTALSATSNVVPELLSVAAHYPQQLA 526 (573)
T ss_pred CEEEEEECCCCCCEEEEEEECCCCCCCCCC
T ss_conf 889999436898134799966787756678
No 157
>KOG1539 consensus
Probab=97.61 E-value=0.0008 Score=42.67 Aligned_cols=90 Identities=20% Similarity=0.180 Sum_probs=55.3
Q ss_pred CCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEE-EEECCCCCCCCEECCCCCEE
Q ss_conf 33157640256741112203530000468776888999971499157999988999679-96627875543788789989
Q gi|254780548|r 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSL 404 (447)
Q Consensus 326 ~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~-~lt~~~~~e~P~wSPDG~~i 404 (447)
-+|.++|..+-.+.|.-.+......+..+||||+||+-.+.++ .|.++|+-++... -+--+..+-+-++||+|.++
T Consensus 556 f~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~---tIr~wDlpt~~lID~~~vd~~~~sls~SPngD~L 632 (910)
T KOG1539 556 FSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDS---TIRTWDLPTGTLIDGLLVDSPCTSLSFSPNGDFL 632 (910)
T ss_pred EEEEEEECHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCC---CEEEEECCCCCEEEEEECCCCCEEEEECCCCCEE
T ss_conf 0599997044445577654466203468579984899950677---0799842676156268607701055877988779
Q ss_pred EEEEEECCCCCEEEEE
Q ss_conf 9999508987337999
Q gi|254780548|r 405 IFSRKKDGDTGSKLYS 420 (447)
Q Consensus 405 ~f~~~~~g~~~~~l~~ 420 (447)
+-+. .+ ..+-.||.
T Consensus 633 AT~H-vd-~~gIylWs 646 (910)
T KOG1539 633 ATVH-VD-QNGIYLWS 646 (910)
T ss_pred EEEE-EC-CCEEEEEE
T ss_conf 9998-66-84079997
No 158
>KOG1538 consensus
Probab=97.61 E-value=0.00035 Score=45.07 Aligned_cols=21 Identities=19% Similarity=0.264 Sum_probs=9.5
Q ss_pred ECCCCCEEEEEECCCCCEEEE
Q ss_conf 437985244455158955677
Q gi|254780548|r 254 GNFRSMILAPRFSSNGKRALI 274 (447)
Q Consensus 254 ~~~~~~~~~p~wSPDG~~la~ 274 (447)
..++.-..+..-.|+|+.++.
T Consensus 260 g~~D~WIWtV~~~PNsQ~v~~ 280 (1081)
T KOG1538 260 GEQDSWIWTVQAKPNSQYVVV 280 (1081)
T ss_pred CCCCEEEEEEEECCCCCEEEE
T ss_conf 455416999997358826998
No 159
>pfam06433 Me-amine-dh_H Methylamine dehydrogenase heavy chain (MADH). Methylamine dehydrogenase (EC:1.4.99.3) a periplasmic quinoprotein found in several methyltrophic bacteria. Induced when grown on methylamine as a carbon source MADH catalyses the oxidative deamination of amines to there corresponding aldehydes. MADH is a hetero- tetramer, comprised of two heavy chains (H) and two light chains (L). The H-chain forms a beta-propeller like structure.
Probab=97.61 E-value=0.0052 Score=37.22 Aligned_cols=251 Identities=15% Similarity=0.184 Sum_probs=131.6
Q ss_pred CCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEE-E-CC----CCCCCCCEEEECCCC
Q ss_conf 41788751367644210012311455402688621764023455768998489985-0-34----676443037711797
Q gi|254780548|r 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-Y-DD----EDILRVYLMDTRIDR 248 (447)
Q Consensus 175 triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s-~-~~----~~~~~i~~~~~~~g~ 248 (447)
+|=+||..-+.- ....++|+.|.|-....-.+. ....-.+..||||+.++..+ | .. .+.--|-++|..+=.
T Consensus 2 ~~r~yv~~~~~~-~~~s~~yv~Dad~g~~lG~i~--~gf~~~~~~s~d~~~~y~a~T~~sR~~rG~RtDvV~v~D~~TL~ 78 (342)
T pfam06433 2 ARRVYVLDPGHF-AATTQVYTIDGNTGRLLGMTD--GGFLPNPVVASDGSFFAQASTVYSRIARGKRTDYVEVIDPQTHL 78 (342)
T ss_pred CEEEEEECCCHH-CCEEEEEEEECCCCCEEEECC--CCCCCCCEECCCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCC
T ss_conf 604899674141-126789999789885876334--56477617889998699998865134556520699997066576
Q ss_pred CE-E-EEECCCCC-----EEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEC
Q ss_conf 17-9-97437985-----24445515895567741378730389984047741100257764320255216747899723
Q gi|254780548|r 249 AP-K-RIGNFRSM-----ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321 (447)
Q Consensus 249 ~~-~-~~~~~~~~-----~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sd 321 (447)
.. + .|-+.+.. ...-+.|+|||++++- .-.-.+-+=++|++.++..+....++- ..--|-|+.=.+..-
T Consensus 79 p~~EI~iP~~pR~~~~~~~~~~~ls~d~k~l~v~-N~TPa~SVsVVDl~~~~~v~ei~tPGC---~~iyP~~~~~F~~~C 154 (342)
T pfam06433 79 PIADIELPEGPRFLVGTYPWMASLTPDNKTLLFY-QFSPSPAVGVVDLEGKAFVRMMDVPDC---YHIFPTANQTFFMHC 154 (342)
T ss_pred CCEEEECCCCHHHHCCCCCCCEEECCCCCEEEEE-CCCCCCEEEEEECCCCCEEEEECCCCE---EEEEECCCCCEEEEC
T ss_conf 2102788875244225653110236798689999-168876578998766605676068987---899646898727883
Q ss_pred CCCCCCEEEEEECCCCCCEEE--E--ECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEC--CCCC-C-
Q ss_conf 776533157640256741112--2--035300004687768889999714991579999889996799662--7875-5-
Q gi|254780548|r 322 REGKEQLYVMQSNGSDQKRIS--Q--DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNL-Q- 393 (447)
Q Consensus 322 r~G~~qiy~~~~~g~~~~rlT--~--~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~--~~~~-e- 393 (447)
+.|.-|-..++.+|...++-+ | +.+.-...|++++++-+++|.+..+ +||..++.+...+.+.. ...+ |
T Consensus 155 gDG~l~~v~ld~~G~~~~~~~~~F~~~~dplf~~pa~~~~~g~~vf~sy~G---~V~~~~~s~~~~~~~~~w~~~~~~e~ 231 (342)
T pfam06433 155 RDGSLAQVGYDDKGNTKMKPTEVFHGEDEYLINHPAYSNKSGRLVWPTYTG---KIFQADLSSKGAKFLKPIEAFTEAEK 231 (342)
T ss_pred CCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCEECCCCEEEEEEECC---EEEEEECCCCCCEECCCCCCCCCCCC
T ss_conf 798507998379985003024543677753243653658887799996176---69997627775137477136786100
Q ss_pred CCEECCCCCEE-EE--------EEEECC------CCCEEEEEEEC-CCCCEEECCCCC
Q ss_conf 43788789989-99--------995089------87337999988-997147336788
Q gi|254780548|r 394 APTWSPSGRSL-IF--------SRKKDG------DTGSKLYSIDL-NGRNETLINTPA 435 (447)
Q Consensus 394 ~P~wSPDG~~i-~f--------~~~~~g------~~~~~l~~~~~-~G~~~~~~~~~g 435 (447)
...|-|-|-.+ +| .-...| ....++|++|. +++...+++...
T Consensus 232 a~~WRPGG~Q~~A~h~~~~~lyvlmh~g~~~tHkdpgteVWv~D~~t~krv~ri~L~~ 289 (342)
T pfam06433 232 ADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFVFVVDATTGKRLRKIELGH 289 (342)
T ss_pred CCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECCCC
T ss_conf 2584766215167755788099997379876413896289999888772999851888
No 160
>KOG0264 consensus
Probab=97.60 E-value=0.005 Score=37.36 Aligned_cols=157 Identities=13% Similarity=0.201 Sum_probs=69.4
Q ss_pred EEEEEECCCCCEEEEEECCCCCEEEEEEECCC--CCCCCCCC-CCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCC
Q ss_conf 24445515895567741378730389984047--74110025-7764320255216747899723776533157640256
Q gi|254780548|r 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQS--NATERLTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336 (447)
Q Consensus 260 ~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~--~~~~~lT~-~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~ 336 (447)
.-..+|+|--..+.-+...++...|| |+.+ .+...... +.+--...+|.|-+..|.-+..-.+. ++..|+..-
T Consensus 230 VeDV~~h~~h~~lF~sv~dd~~L~iw--D~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~t--V~LwDlRnL 305 (422)
T KOG0264 230 VEDVAWHPLHEDLFGSVGDDGKLMIW--DTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKT--VALWDLRNL 305 (422)
T ss_pred EEHHHCCCCCHHHHEEECCCCEEEEE--ECCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCC--EEEEECHHC
T ss_conf 22000330453141254489758998--75778777863211467734689857877755886267872--797521002
Q ss_pred CCCEEEEECC-CCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCC-----------EEEEECCCCCC---CCEECCCC
Q ss_conf 7411122035-300004687768889999714991579999889996-----------79966278755---43788789
Q gi|254780548|r 337 DQKRISQDKE-ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-----------ERLLVEDSNLQ---APTWSPSG 401 (447)
Q Consensus 337 ~~~rlT~~~~-~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~-----------~~~lt~~~~~e---~P~wSPDG 401 (447)
+....++++. .......|||.-+.|.-++..+++.+++-+.--|.+ +-+.+++|+-. .-+|.|+-
T Consensus 306 ~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~e 385 (422)
T KOG0264 306 NKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNE 385 (422)
T ss_pred CCCCEECCCCCCCEEEEEECCCCCCEEEECCCCCCEEEEECCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCC
T ss_conf 56754535777635898867998745674156885899862413664484463228963058734743552243578998
Q ss_pred CEEEEEEEECCCCCEEEEEEE
Q ss_conf 989999950898733799998
Q gi|254780548|r 402 RSLIFSRKKDGDTGSKLYSID 422 (447)
Q Consensus 402 ~~i~f~~~~~g~~~~~l~~~~ 422 (447)
-+++-+...+ +..++|.|.
T Consensus 386 PW~I~SvaeD--N~LqIW~~s 404 (422)
T KOG0264 386 PWTIASVAED--NILQIWQMA 404 (422)
T ss_pred CEEEEEECCC--CEEEEEECC
T ss_conf 7489884378--658886321
No 161
>KOG1538 consensus
Probab=97.59 E-value=0.0022 Score=39.74 Aligned_cols=10 Identities=30% Similarity=0.654 Sum_probs=4.0
Q ss_pred ECCCCCEEEE
Q ss_conf 5158955677
Q gi|254780548|r 265 FSSNGKRALI 274 (447)
Q Consensus 265 wSPDG~~la~ 274 (447)
+-|+|..++.
T Consensus 230 Yf~NGEy~Li 239 (1081)
T KOG1538 230 YFTNGEYILL 239 (1081)
T ss_pred ECCCCCEEEE
T ss_conf 2279858998
No 162
>KOG2041 consensus
Probab=97.46 E-value=0.0044 Score=37.73 Aligned_cols=12 Identities=17% Similarity=0.290 Sum_probs=6.7
Q ss_pred EEECCCCCEEEE
Q ss_conf 557689984899
Q gi|254780548|r 217 PRFSPNQQKVAY 228 (447)
Q Consensus 217 P~wSpDG~~Iay 228 (447)
..|+|+|.-+|.
T Consensus 264 akWnh~G~vLAv 275 (1189)
T KOG2041 264 AKWNHNGAVLAV 275 (1189)
T ss_pred CEECCCCCEEEE
T ss_conf 365689838997
No 163
>KOG0265 consensus
Probab=97.45 E-value=0.0083 Score=35.86 Aligned_cols=245 Identities=16% Similarity=0.189 Sum_probs=115.5
Q ss_pred EEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEECC-CCCEEE
Q ss_conf 8999841555420000232337778899999998999997504455554417887513676442100123114-554026
Q gi|254780548|r 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIR 204 (447)
Q Consensus 126 v~~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~f~triafv~~~~~~~~~~~~l~i~d~-DG~n~~ 204 (447)
=++.||+|.....=+ +-.-+|+ -++++..|--++..+|-. +.+ |.++.-|. -|...+
T Consensus 69 r~I~LWnv~gdceN~----------~~lkgHs------gAVM~l~~~~d~s~i~S~---gtD---ktv~~wD~~tG~~~r 126 (338)
T KOG0265 69 RAIVLWNVYGDCENF----------WVLKGHS------GAVMELHGMRDGSHILSC---GTD---KTVRGWDAETGKRIR 126 (338)
T ss_pred CEEEEEECCCCCCCE----------EEECCCC------CEEEEEEECCCCCEEEEE---CCC---CEEEEEECCCCEEEE
T ss_conf 069999615651110----------2323664------126762563689889983---489---658987621250010
Q ss_pred EEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEE
Q ss_conf 88621764023455768998489985034676443037711797179974379852444551589556774137873038
Q gi|254780548|r 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284 (447)
Q Consensus 205 ~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I 284 (447)
.. ++....+.+-.-+--|..++- |-... ..+.++|.++....+.. ..+....+..|.-++.++ ++.--|+...+
T Consensus 127 k~-k~h~~~vNs~~p~r~g~~lv~-SgsdD--~t~kl~D~R~k~~~~t~-~~kyqltAv~f~d~s~qv-~sggIdn~ikv 200 (338)
T KOG0265 127 KH-KGHTSFVNSLDPSRRGPQLVC-SGSDD--GTLKLWDIRKKEAIKTF-ENKYQLTAVGFKDTSDQV-ISGGIDNDIKV 200 (338)
T ss_pred HH-CCCCCEEEECCCCCCCCEEEE-ECCCC--CEEEEEEECCCCHHHCC-CCCEEEEEEEECCCCCCE-EECCCCCCEEE
T ss_conf 20-155462551383026976788-52888--60899860111101055-664068999863565303-65134575055
Q ss_pred EEEECCCCCCCC-CCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEEC--CCCCCEEE-EEC-----CCCEEEEEEC
Q ss_conf 998404774110-02577643202552167478997237765331576402--56741112-203-----5300004687
Q gi|254780548|r 285 YSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN--GSDQKRIS-QDK-----EASYFDPVWS 355 (447)
Q Consensus 285 ~~~d~~~~~~~~-lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~--g~~~~rlT-~~~-----~~~~~~p~wS 355 (447)
| |+......- |.-+.-.-+.-+-||+|..+.=.|-.. .+-+.+.. -...|.|. +.+ .-|...-+||
T Consensus 201 W--d~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~---tvrvwdvrp~~p~~R~v~if~g~~hnfeknlL~csws 275 (338)
T KOG0265 201 W--DLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDN---TVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWS 275 (338)
T ss_pred E--CCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCC---EEEEEEECCCCCCCCEEEEEECCHHHHHHHCCEEECC
T ss_conf 1--2566860588306667414677646888343200045---4788870136777715898623102232110165036
Q ss_pred CCCCEEEEEECCCCCEEEEEEECCCCCEEEEECC--CCCCCCEECCCCCEEEE
Q ss_conf 7688899997149915799998899967996627--87554378878998999
Q gi|254780548|r 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIF 406 (447)
Q Consensus 356 PdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~--~~~e~P~wSPDG~~i~f 406 (447)
|+++.|.+-+-+. .+|+.|..+.....--.| +..-.-.|.|.-..|.-
T Consensus 276 p~~~~i~ags~dr---~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~iils 325 (338)
T KOG0265 276 PNGTKITAGSADR---FVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPIILS 325 (338)
T ss_pred CCCCCCCCCCCCC---EEEEEECCCCCEEEECCCCCEEEEEEEECCCCCEEEE
T ss_conf 8987220011331---1899643663279986774205777631378767888
No 164
>KOG1539 consensus
Probab=97.43 E-value=0.0087 Score=35.72 Aligned_cols=16 Identities=31% Similarity=0.590 Sum_probs=7.1
Q ss_pred EEECCCCCEEEEEECC
Q ss_conf 4687768889999714
Q gi|254780548|r 352 PVWSPQGDLIAFTKFS 367 (447)
Q Consensus 352 p~wSPdG~~Iaf~~~~ 367 (447)
..+||.|+.+|-++.+
T Consensus 623 ls~SPngD~LAT~Hvd 638 (910)
T KOG1539 623 LSFSPNGDFLATVHVD 638 (910)
T ss_pred EEECCCCCEEEEEEEC
T ss_conf 5877988779999866
No 165
>pfam07433 DUF1513 Protein of unknown function (DUF1513). This family consists of several bacterial proteins of around 360 residues in length. The function of this family is unknown.
Probab=97.43 E-value=0.0088 Score=35.70 Aligned_cols=191 Identities=13% Similarity=0.119 Sum_probs=109.1
Q ss_pred EEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEE--EEEECCCCCEEEEEEC--CCCCEEEEEEECCCC
Q ss_conf 557689984899850346764430377117971799743798524--4455158955677413--787303899840477
Q gi|254780548|r 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL--APRFSSNGKRALISVQ--KDEAMDIYSVDLQSN 292 (447)
Q Consensus 217 P~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~--~p~wSPDG~~la~~~s--~~g~~~I~~~d~~~~ 292 (447)
.+.+|+....++...+ ...-.+++|..+|+....+...++-.+ =..|||||++|+.+-+ ..|.--|-++|+..
T Consensus 10 ~a~~p~~~~avafARR--PG~~~~v~D~~~g~~~~~l~a~~~RHFyGHg~fs~DG~~LytTEnd~~~g~G~IGV~d~~~- 86 (304)
T pfam07433 10 VAAHPTRPRAVAFARR--PGTFALVFDPRTGQELQTLASPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAAD- 86 (304)
T ss_pred CCCCCCCCEEEEEEEC--CCCEEEEEECCCCCEEEEECCCCCCEEECCEEECCCCCEEEECCCCCCCCCEEEEEEECCC-
T ss_conf 0138999739999979--9768999985899564788289997771566074998989961556678857999999546-
Q ss_pred CCCCCCCCC--CCC-CCEEEECCCCEEEEEEC------CCCC---------CCEEEEEECCC-CCCEEEE---ECCCCEE
Q ss_conf 411002577--643-20255216747899723------7765---------33157640256-7411122---0353000
Q gi|254780548|r 293 ATERLTNTL--FIN-ISASYSPDSSQIVFESD------REGK---------EQLYVMQSNGS-DQKRISQ---DKEASYF 350 (447)
Q Consensus 293 ~~~~lT~~~--~~d-~~p~~spDG~~I~f~Sd------r~G~---------~qiy~~~~~g~-~~~rlT~---~~~~~~~ 350 (447)
..+|+-... +|. -+-.|.|||+.++-.-. ..|+ |.|-.+|..+| -..+.+. ...-+..
T Consensus 87 ~~~ri~Ef~s~GiGPHel~l~pdg~tLvVANGGI~Thpd~gR~kLNL~tM~psL~~ld~~sG~ll~q~~L~~~~~~lSiR 166 (304)
T pfam07433 87 GYKRIGEFSTGGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDRRTGALLEQVELPPDLHQLSIR 166 (304)
T ss_pred CCEEEEEECCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCEEEECCCCCCEEEEEECCHHHHHCCEE
T ss_conf 94898686489988401899499998999818823788778610472015861699807898688888669567115267
Q ss_pred EEEECCCCCEEEEEECCCCC----E-EEEEEECCCCCEEEEECC--------CCCCCCEECCCCCEEEEEEEECC
Q ss_conf 04687768889999714991----5-799998899967996627--------87554378878998999995089
Q gi|254780548|r 351 DPVWSPQGDLIAFTKFSGEK----F-AIGVMKKDGSQERLLVED--------SNLQAPTWSPSGRSLIFSRKKDG 412 (447)
Q Consensus 351 ~p~wSPdG~~Iaf~~~~~~~----~-~i~~~~~~g~~~~~lt~~--------~~~e~P~wSPDG~~i~f~~~~~g 412 (447)
..+|.+||.- +|.-+..+. . =+++. ..|+..+.+... +..-+-.+++||+.|+-++-++|
T Consensus 167 HLa~~~~G~V-~~g~Q~qG~~~~~~PLla~~-~~g~~~~~~~~~~~~~~~l~gY~GSIA~~~~g~~ia~TsPrGg 239 (304)
T pfam07433 167 HLAVDGDGTV-WFGQQYEGEPGDAPPLVALH-RRGQALQLLPAPEEQWRRLNGYIGSVAADRDGRLVAVTSPRGG 239 (304)
T ss_pred EEEECCCCCE-EEEEEECCCCCCCCCEEEEE-CCCCCCEECCCCHHHHHHHCCEEEEEEECCCCCEEEEECCCCC
T ss_conf 7898799959-99986048976678879998-3999654757997798863891799998689999999789888
No 166
>KOG0277 consensus
Probab=97.43 E-value=0.0088 Score=35.70 Aligned_cols=88 Identities=19% Similarity=0.232 Sum_probs=40.9
Q ss_pred EEEEECCCCCEEEEEEECCCCCEEEEEECCCCC-EEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCC
Q ss_conf 012311455402688621764023455768998-4899850346764430377117971799743798524445515895
Q gi|254780548|r 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ-KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270 (447)
Q Consensus 192 ~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~-~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~ 270 (447)
+||.++.- ...+. .++++++++...|||--. -+|++| .....++|- ++..+....+..+.....+-.||-=..
T Consensus 130 KLW~~~r~-~Sv~T-f~gh~~~Iy~a~~sp~~~nlfas~S--gd~~l~lwd--vr~~gk~~~i~ah~~Eil~cdw~ky~~ 203 (311)
T KOG0277 130 KLWDPNRP-NSVQT-FNGHNSCIYQAAFSPHIPNLFASAS--GDGTLRLWD--VRSPGKFMSIEAHNSEILCCDWSKYNH 203 (311)
T ss_pred EEECCCCC-CCEEE-ECCCCCEEEEEECCCCCCCEEEECC--CCCEEEEEE--ECCCCCEEEEEECCCEEEEECCCCCCC
T ss_conf 83138987-51476-2377617998861778888478804--885289877--037996367870554067603213687
Q ss_pred EEEEEECCCCCEEEE
Q ss_conf 567741378730389
Q gi|254780548|r 271 RALISVQKDEAMDIY 285 (447)
Q Consensus 271 ~la~~~s~~g~~~I~ 285 (447)
.++++...|+...+|
T Consensus 204 ~vl~Tg~vd~~vr~w 218 (311)
T KOG0277 204 NVLATGGVDNLVRGW 218 (311)
T ss_pred CEEEECCCCCEEEEE
T ss_conf 489963778618997
No 167
>KOG0282 consensus
Probab=97.39 E-value=0.0022 Score=39.69 Aligned_cols=179 Identities=13% Similarity=0.146 Sum_probs=96.6
Q ss_pred EEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCE---EEEEECCCCCEEEEEECCCCCEEEEEEECC
Q ss_conf 23455768998489985034676443037711797179974379852---444551589556774137873038998404
Q gi|254780548|r 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI---LAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290 (447)
Q Consensus 214 ~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~---~~p~wSPDG~~la~~~s~~g~~~I~~~d~~ 290 (447)
+.+-+|.|--.++. .|- +....|+++++... .+.+..|.|.+ .+..||++|.+++ +.+.|....|| |++
T Consensus 217 vsai~~fp~~~hLl-LS~--gmD~~vklW~vy~~--~~~lrtf~gH~k~Vrd~~~s~~g~~fL-S~sfD~~lKlw--DtE 288 (503)
T KOG0282 217 VSAIQWFPKKGHLL-LSG--GMDGLVKLWNVYDD--RRCLRTFKGHRKPVRDASFNNCGTSFL-SASFDRFLKLW--DTE 288 (503)
T ss_pred CCHHHHCCCEEEEE-EEC--CCCCEEEEEEEECC--CCEEHHHHCCHHHHHHHHCCCCCCEEE-EEECCEEEEEE--CCC
T ss_conf 00545312100689-853--78826999998507--630102321114666530165688465-41011034420--034
Q ss_pred CCCCC-CCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCC
Q ss_conf 77411-00257764320255216747899723776533157640256741112203530000468776888999971499
Q gi|254780548|r 291 SNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369 (447)
Q Consensus 291 ~~~~~-~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~ 369 (447)
+|+.. +.+.+. +-+-..|.||+..+.++-.-.++ |-..|...+++.+--...-+...+-.+-|+|.+.+-++.++
T Consensus 289 TG~~~~~f~~~~-~~~cvkf~pd~~n~fl~G~sd~k--i~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdk- 364 (503)
T KOG0282 289 TGQVLSRFHLDK-VPTCVKFHPDNQNIFLVGGSDKK--IRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDK- 364 (503)
T ss_pred CCEEEEEEECCC-CCEEEECCCCCCCEEEEECCCCC--EEEEECCCHHHHHHHHHHHHHEEEEEECCCCCEEEEECCCC-
T ss_conf 545888875698-75034027899857987157871--79986353488999886442001158723884376612676-
Q ss_pred CEEEEEEECCCCCEEEEECCCCCCCC--EECCCCCEEE
Q ss_conf 15799998899967996627875543--7887899899
Q gi|254780548|r 370 KFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLI 405 (447)
Q Consensus 370 ~~~i~~~~~~g~~~~~lt~~~~~e~P--~wSPDG~~i~ 405 (447)
.+.|+-....- ..+.+......-.| .-.|+|++++
T Consensus 365 s~riWe~~~~v-~ik~i~~~~~hsmP~~~~~P~~~~~~ 401 (503)
T KOG0282 365 SVRIWENRIPV-PIKNIADPEMHTMPCLTLHPNGKWFA 401 (503)
T ss_pred CEEEEECCCCC-CCHHHCCHHHCCCCCEECCCCCCEEH
T ss_conf 28998757886-30110031120375044079987620
No 168
>KOG0288 consensus
Probab=97.39 E-value=0.0035 Score=38.39 Aligned_cols=34 Identities=12% Similarity=-0.029 Sum_probs=14.0
Q ss_pred EEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEE
Q ss_conf 0046877688899997149915799998899967996
Q gi|254780548|r 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386 (447)
Q Consensus 350 ~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~l 386 (447)
.+...|++|..+.-+++++ .+-++|+.+.++++.
T Consensus 345 tSl~ls~~g~~lLsssRDd---tl~viDlRt~eI~~~ 378 (459)
T KOG0288 345 TSLDLSMDGLELLSSSRDD---TLKVIDLRTKEIRQT 378 (459)
T ss_pred EEEEECCCCEEEEEECCCC---CEEEEECCCCCEEEE
T ss_conf 4576536870786422777---423320565407877
No 169
>KOG0288 consensus
Probab=97.37 E-value=0.01 Score=35.25 Aligned_cols=236 Identities=18% Similarity=0.230 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE----CCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCC
Q ss_conf 7889999999899999750445555441788751----367644210012311455402688621764023455768998
Q gi|254780548|r 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE----SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224 (447)
Q Consensus 149 ~~~R~~ah~~ad~i~~~ltG~~G~f~triafv~~----~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~ 224 (447)
..|+..+|+ -+....|-|.-|.+ ++|.|=+. -..+....-+||-.|. +.-..+|+-+.+ -+.+..+.-+-.
T Consensus 200 k~W~v~~~k--~~~~~tLaGs~g~i-t~~d~d~~~~~~iAas~d~~~r~Wnvd~-~r~~~TLsGHtd-kVt~ak~~~~~~ 274 (459)
T KOG0288 200 KLWNVLGEK--SELISTLAGSLGNI-TSIDFDSDNKHVIAASNDKNLRLWNVDS-LRLRHTLSGHTD-KVTAAKFKLSHS 274 (459)
T ss_pred HHHHCCCCH--HHHHHHHHCCCCCC-CEEEECCCCCEEEEECCCCCEEEEECCC-HHHHHHHCCCCC-CEEEEHHHCCCC
T ss_conf 566416641--22222233257775-2233158884697205888435544450-556665316643-012000322431
Q ss_pred EEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCC-EEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCC
Q ss_conf 48998503467644303771179717997437985-24445515895567741378730389984047741100257764
Q gi|254780548|r 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303 (447)
Q Consensus 225 ~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~-~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~ 303 (447)
++ +|-.... .|-..|+..+.-.+-+ +++. ...-.-+ ....++.-.|++ |-..|..+....+--...+-
T Consensus 275 ~v--Vsgs~DR--tiK~WDl~k~~C~kt~--l~~S~cnDI~~~---~~~~~SgH~Dkk--vRfwD~Rs~~~~~sv~~gg~ 343 (459)
T KOG0288 275 RV--VSGSADR--TIKLWDLQKAYCSKTV--LPGSQCNDIVCS---ISDVISGHFDKK--VRFWDIRSADKTRSVPLGGR 343 (459)
T ss_pred CE--EECCCCC--HHHHHHHHHHHEECCC--CCCCCCCCEEEC---CEEEEECCCCCC--EEEEECCCCCEEEEEECCCC
T ss_conf 11--3264411--1566554333201454--555543546740---213640566441--68886257852467516760
Q ss_pred CCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCC-----CEEEEEECCCCCEEEEEECCCCCEEEEEEEC
Q ss_conf 32025521674789972377653315764025674111220353-----0000468776888999971499157999988
Q gi|254780548|r 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378 (447)
Q Consensus 304 d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~-----~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~ 378 (447)
-++...++||..+. ++.|.. .+-++|+.+.+.+.. +...+ +.....+||||.++|--+.++ .+|+.+.
T Consensus 344 vtSl~ls~~g~~lL-sssRDd--tl~viDlRt~eI~~~-~sA~g~k~asDwtrvvfSpd~~YvaAGS~dg---sv~iW~v 416 (459)
T KOG0288 344 VTSLDLSMDGLELL-SSSRDD--TLKVIDLRTKEIRQT-FSAEGFKCASDWTRVVFSPDGSYVAAGSADG---SVYIWSV 416 (459)
T ss_pred EEEEEECCCCEEEE-EECCCC--CEEEEECCCCCEEEE-EECCCCCCCCCCCEEEECCCCCEEEECCCCC---CEEEEEC
T ss_conf 34576536870786-422777--423320565407877-5224434234354158879975253056777---3799970
Q ss_pred CCCCE-EEEECCCCC---CCCEECCCCCEEEEE
Q ss_conf 99967-996627875---543788789989999
Q gi|254780548|r 379 DGSQE-RLLVEDSNL---QAPTWSPSGRSLIFS 407 (447)
Q Consensus 379 ~g~~~-~~lt~~~~~---e~P~wSPDG~~i~f~ 407 (447)
.++.. .+|.....+ -+-+|+|-|+.++=+
T Consensus 417 ~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsa 449 (459)
T KOG0288 417 FTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSA 449 (459)
T ss_pred CCCEEEEEECCCCCCCCEEEEEECCCCCHHHCC
T ss_conf 576377773068887533798876888633141
No 170
>PRK13613 lipoprotein LpqB; Provisional
Probab=97.35 E-value=0.011 Score=35.10 Aligned_cols=162 Identities=18% Similarity=0.242 Sum_probs=87.3
Q ss_pred EEEEECCCCCEEEEEECCCCCEEEEEEECCCCCC--------CCCCCCCCCCCCEEEECCCCEEEEEECCC-CCCCEEEE
Q ss_conf 4445515895567741378730389984047741--------10025776432025521674789972377-65331576
Q gi|254780548|r 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--------ERLTNTLFINISASYSPDSSQIVFESDRE-GKEQLYVM 331 (447)
Q Consensus 261 ~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~--------~~lT~~~~~d~~p~~spDG~~I~f~Sdr~-G~~qiy~~ 331 (447)
.+++-|-|++.++.... +|. .+|+..+..+.. +.++.... =+.|+|..+|. +++.||+ +.+.+...
T Consensus 365 ~s~avs~d~~~~A~v~~-dg~-~l~v~~l~~~~~~~~~~~~~~~~~~g~~-Lt~PSwD~~g~--vWvvd~~~~~~r~l~~ 439 (603)
T PRK13613 365 RAVAVSRDETRAAGISP-DGD-SLYVGSLVSGGSLGDPVVSSTGKTEGDR-LTSPSWDGYGD--LWVADRDPADPRLLLL 439 (603)
T ss_pred CCCEECCCCCEEEEEEC-CCC-EEEEEECCCCCCCCCCCCCCCEECCCCC-CCCCCCCCCCC--EEEEECCCCCCCEEEE
T ss_conf 64233157650378942-786-4788741367755666432200104786-56784758998--7998558987407982
Q ss_pred EECCCCCCEEEEEC-C-CCEEEEEECCCCCEEEEEECCCCCEEEEE--EECCCCC-EEEEE--C----CCCCC---CCEE
Q ss_conf 40256741112203-5-30000468776888999971499157999--9889996-79966--2----78755---4378
Q gi|254780548|r 332 QSNGSDQKRISQDK-E-ASYFDPVWSPQGDLIAFTKFSGEKFAIGV--MKKDGSQ-ERLLV--E----DSNLQ---APTW 397 (447)
Q Consensus 332 ~~~g~~~~rlT~~~-~-~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~--~~~~g~~-~~~lt--~----~~~~e---~P~w 397 (447)
....+.+..+...+ . ........|+||.+||+....+++-+|++ +-.+++. ...++ + +...+ .-+|
T Consensus 440 ~~g~~~~~~v~~p~L~g~~I~~lrvSrDG~R~A~vv~~~g~~~l~v~~V~R~~~g~~~~v~l~~~~~~~~~l~~v~~vsW 519 (603)
T PRK13613 440 LAGDGDPVEVRTPGLDGVRVTELRVSADGVRIALLVEKDGKTSLLIGRVERGGKAVSPTVSVLELRSAAPQLEEVTAMSW 519 (603)
T ss_pred CCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCEECCCCEECCCCCCCEEEEEE
T ss_conf 17887328985777789777899965887379999952896279999998379887761512343404666561566578
Q ss_pred CCCCCEEEEEEEECCCCCEEEEEEECCCCCEE
Q ss_conf 87899899999508987337999988997147
Q gi|254780548|r 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429 (447)
Q Consensus 398 SPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~ 429 (447)
..+++-++-....+| ..++|.+.+||+..-
T Consensus 520 ~~~~~LvVlg~~~~g--~~~v~~V~vDGs~~~ 549 (603)
T PRK13613 520 AGDSRLVVVGREEGG--VQQARYVQVDGSTPS 549 (603)
T ss_pred CCCCEEEEEECCCCC--CCEEEEEECCCCCCC
T ss_conf 279869998435898--530399983685688
No 171
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=97.35 E-value=0.011 Score=35.09 Aligned_cols=254 Identities=15% Similarity=0.189 Sum_probs=131.5
Q ss_pred EEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEECC-CCCEEEE
Q ss_conf 999841555420000232337778899999998999997504455554417887513676442100123114-5540268
Q gi|254780548|r 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRY 205 (447)
Q Consensus 127 ~~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~f~triafv~~~~~~~~~~~~l~i~d~-DG~n~~~ 205 (447)
++.-+|..+|+.++.+.... .++|-.++...+ +||....+ +|+..|. ||+-.-+
T Consensus 76 ~v~Ald~~tG~~~W~~~~~~------------------~i~~g~~v~~~~-v~vgt~~G------~l~Ald~~tG~~~W~ 130 (377)
T TIGR03300 76 TVVALDAETGKRLWRVDLDE------------------RLSGGVGADGGL-VFVGTEKG------EVIALDAEDGKELWR 130 (377)
T ss_pred EEEEEECCCCCEEEEEECCC------------------CEEEEEEEECCE-EEEEECCC------EEEEEECCCCCEEEE
T ss_conf 59999965894887888699------------------815603882999-99990997------599999779959999
Q ss_pred EEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEE-CCCCC----EEEEEECCCCCEEEEEECCCC
Q ss_conf 8621764023455768998489985034676443037711797179974-37985----244455158955677413787
Q gi|254780548|r 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSM----ILAPRFSSNGKRALISVQKDE 280 (447)
Q Consensus 206 l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~-~~~~~----~~~p~wSPDG~~la~~~s~~g 280 (447)
.. -...+..+|... + .++.+.+ .+ .++|-+|..+|+..=... ..+.. ..+|... | ..+++ ...+|
T Consensus 131 ~~-~~~~v~s~P~v~-~-g~V~v~t---~d-g~l~ald~~tG~~~W~~~~~~p~ltlrg~s~p~~~-~-~~v~~-g~~~G 200 (377)
T TIGR03300 131 AK-LSSEVLSPPLVA-N-GLVVVRT---ND-GRLTALDAATGERLWTYSRVTPALTLRGSASPVIA-D-GGVLV-GFAGG 200 (377)
T ss_pred EE-CCCCEECCCEEE-C-CEEEEEE---CC-CEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEE-C-CEEEE-ECCCC
T ss_conf 90-798404587886-9-9999997---89-96999978799789985246875101565553798-9-99999-82699
Q ss_pred CEEEEEEECCCCCCCC---CCCCCC---------CCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCC
Q ss_conf 3038998404774110---025776---------4320255216747899723776533157640256741112203530
Q gi|254780548|r 281 AMDIYSVDLQSNATER---LTNTLF---------INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348 (447)
Q Consensus 281 ~~~I~~~d~~~~~~~~---lT~~~~---------~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~ 348 (447)
.|+.+|+++|.... +....+ ++..|... |..++ +....| +++.+|+.+|+..- +.+ ...
T Consensus 201 --~l~ald~~tG~~~W~~~v~~~~G~telerl~Di~~~P~v~--~~~vy-~~s~~G--~l~a~d~~sG~~~W-~~~-~ss 271 (377)
T TIGR03300 201 --KLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVD--GGQVY-AVSYQG--RVAALDLRSGRVLW-KRD-ASS 271 (377)
T ss_pred --EEEEEECCCCCEEEEEEECCCCCCCCCCCEECCCCCCCCC--CCEEE-EEECCC--EEEEEECCCCCEEE-EEE-CCC
T ss_conf --8999999999399881003566776421100124676213--98899-970488--49998721694730-152-675
Q ss_pred EEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECC---CCCCCCEECCCCCEEEEEEEECCCCCEEEEEEEC-C
Q ss_conf 00046877688899997149915799998899967996627---8755437887899899999508987337999988-9
Q gi|254780548|r 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-N 424 (447)
Q Consensus 349 ~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~---~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~-~ 424 (447)
+..|.. +++.| |....++ .|+-+|..+++..--++. +..-+|... |.+|++ ...+| .|+.+|. +
T Consensus 272 ~~~~~v--~~~~v-yv~~~~g--~l~Ald~~tG~~~W~~~~l~~r~~s~P~~~--g~~v~v-gd~~G----~l~~ld~~t 339 (377)
T TIGR03300 272 YQGPAV--DDNRL-YVTDADG--VVVALDRRSGSELWKNDELKYRQLTAPAVV--GGYLVV-GDFEG----YLHWLSRED 339 (377)
T ss_pred CCCEEE--ECCEE-EEECCCC--CEEEEECCCCCEEECCCCCCCCCCCCCEEE--CCEEEE-ECCCC----EEEEEECCC
T ss_conf 444058--75619-9986898--479999899957801455566554488898--999999-96898----899999888
Q ss_pred CCCEEECCCCCC
Q ss_conf 971473367887
Q gi|254780548|r 425 GRNETLINTPAY 436 (447)
Q Consensus 425 G~~~~~~~~~g~ 436 (447)
|+..-+...++.
T Consensus 340 G~~~~r~~~~g~ 351 (377)
T TIGR03300 340 GSFVARLKTDGS 351 (377)
T ss_pred CCEEEEEECCCC
T ss_conf 979999985899
No 172
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=97.30 E-value=0.012 Score=34.76 Aligned_cols=179 Identities=19% Similarity=0.236 Sum_probs=93.6
Q ss_pred EEEEECCCC--CEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCC
Q ss_conf 012311455--402688621764023455768998489985034676443037711797179974379852444551589
Q gi|254780548|r 192 SLCVMDRDG--ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269 (447)
Q Consensus 192 ~l~i~d~DG--~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG 269 (447)
.+.+.|..+ .....+.... ..+..-.|+|+++.++..+. ....+.++++..+.....+..+........|+|+|
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 210 (466)
T COG2319 135 TVKLWDLSTPGKLIRTLEGHS-ESVTSLAFSPDGKLLASGSS---LDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDG 210 (466)
T ss_pred EEEEEECCCCCEEEEEEECCC-CCEEEEEEECCCCEEEEEEC---CCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCC
T ss_conf 399997688862778984788-71789999349998999627---99859986478884368771789987899986789
Q ss_pred CEEEEEECCCCCEEEEEEECCCCCCCC--CCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCC-CEEEEECC
Q ss_conf 556774137873038998404774110--025776432025521674789972377653315764025674-11122035
Q gi|254780548|r 270 KRALISVQKDEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKE 346 (447)
Q Consensus 270 ~~la~~~s~~g~~~I~~~d~~~~~~~~--lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~-~rlT~~~~ 346 (447)
..++.+.+.++...+| +...+.... +-.+.... ...|+|++..++ +..+.+. +.+.+...... ........
T Consensus 211 ~~~~~~~~~d~~i~~w--d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~d~~--~~~~~~~~~~~~~~~~~~~~ 284 (466)
T COG2319 211 GLLIASGSSDGTIRLW--DLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLA-SGSSDGT--IRLWDLRSSSSLLRTLSGHS 284 (466)
T ss_pred CEEEEEECCCCEEEEE--CCCCCCEEEEEEECCCCCC-EEEECCCCCEEE-EEECCCC--EEEEECCCCCEEEEEECCCC
T ss_conf 8089974589729964--2878838878870556772-589868998899-9828985--99997667870668860688
Q ss_pred CCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCE
Q ss_conf 3000046877688899997149915799998899967
Q gi|254780548|r 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383 (447)
Q Consensus 347 ~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~ 383 (447)
.......|+|++..++....+ +...++ +..+...
T Consensus 285 ~~v~~~~~~~~~~~~~~~~~d-~~~~~~--~~~~~~~ 318 (466)
T COG2319 285 SSVLSVAFSPDGKLLASGSSD-GTVRLW--DLETGKL 318 (466)
T ss_pred CEEEEEEECCCCCEEEEECCC-CCEEEE--ECCCCCC
T ss_conf 508999987888869998699-857987--7677862
No 173
>KOG0269 consensus
Probab=97.28 E-value=0.011 Score=35.04 Aligned_cols=113 Identities=16% Similarity=0.162 Sum_probs=49.5
Q ss_pred EEECCCCCEEEEEEECCCCCCCCCEEEECCCCC-EEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCC
Q ss_conf 557689984899850346764430377117971-7997437985244455158955677413787303899840477411
Q gi|254780548|r 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295 (447)
Q Consensus 217 P~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~-~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~ 295 (447)
-.|||--....+..++++ -+.++|++.-.+ .++++.+.|..+.-.|+|++.+|| +..+|+...||-+. +....
T Consensus 182 V~fsp~~~~~F~s~~dsG---~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lA-TGGRDK~vkiWd~t--~~~~~ 255 (839)
T KOG0269 182 VKFSPGYGNKFASIHDSG---YLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLA-TGGRDKMVKIWDMT--DSRAK 255 (839)
T ss_pred EEECCCCCCEEEEECCCC---EEEEEECCCCHHHHHHHHCCCCCEEEEEECCCCCEEE-ECCCCCCEEEEECC--CCCCC
T ss_conf 241468886678861786---4787644670367877640468658875369876564-34877627988656--88766
Q ss_pred C-CC-CCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECC
Q ss_conf 0-02-5776432025521674789972377653315764025
Q gi|254780548|r 296 R-LT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335 (447)
Q Consensus 296 ~-lT-~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g 335 (447)
+ +| +.-+.-....|-|+-+...-++.-.+...|++.|+.-
T Consensus 256 ~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrR 297 (839)
T KOG0269 256 PKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRR 297 (839)
T ss_pred CEEEEEECCEEEEEEECCCCCCHHHHHHCCCCCEEEEEEECC
T ss_conf 336886032001466256763301010103442379985036
No 174
>PRK13615 lipoprotein LpqB; Provisional
Probab=97.28 E-value=0.013 Score=34.60 Aligned_cols=159 Identities=13% Similarity=0.178 Sum_probs=64.9
Q ss_pred EEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEE
Q ss_conf 44551589556774137873038998404774110025776432025521674789972377653315764025674111
Q gi|254780548|r 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341 (447)
Q Consensus 262 ~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rl 341 (447)
++..|+||+.+++... ++ ++.+-..+.....++.... -+.|+|.++|- +++.+|.+..-+-....+| ..+.+
T Consensus 313 a~~vs~dg~~~a~~~~-~~---~~~~~~~~~~~~~~~~~~~-Lt~PS~D~~G~--vWt~d~~~~~~l~~~~~~g-~~~~v 384 (532)
T PRK13615 313 AATLSADGRQAAVRNA-SG---VWSVGDGDRDAVLLDTRPG-LVAPSLDAQGY--VWSTPASDPRGLVAWGPDG-VGHPV 384 (532)
T ss_pred CCEECCCCCEEEEECC-CC---EEEECCCCCCCEEECCCCC-CCCCCCCCCCC--EEEECCCCCCEEEEECCCC-CEEEE
T ss_conf 6256468756999848-73---0895148743056326887-55762879998--7973279981389987898-60699
Q ss_pred E--EECCCCEEEEEECCCCCEEEEEECCCCCEE--EEEEECCCCCEEEEEC--------CCCCCCCEECCCCCEEEEEEE
Q ss_conf 2--203530000468776888999971499157--9999889996799662--------787554378878998999995
Q gi|254780548|r 342 S--QDKEASYFDPVWSPQGDLIAFTKFSGEKFA--IGVMKKDGSQERLLVE--------DSNLQAPTWSPSGRSLIFSRK 409 (447)
Q Consensus 342 T--~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~--i~~~~~~g~~~~~lt~--------~~~~e~P~wSPDG~~i~f~~~ 409 (447)
. ..+.....+...||||.+||.....++.-. |..+-.+++....|+. ......-+|.-+.+.++-...
T Consensus 385 ~v~~l~~~~V~slrVS~DG~RiAvv~~~~~~~~l~v~~I~Rd~G~p~~l~~~pi~l~a~~~~~~~~sW~g~s~l~Vl~r~ 464 (532)
T PRK13615 385 AVSWTATGRVVSLEVARDGARVLVQLETGAGPQLLVASIVRDGGVPTSLTTTPLELLASPGTPLDATWVDELDVATLTLA 464 (532)
T ss_pred ECCCCCCCEEEEEEECCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEEECCCEEEEEEEC
T ss_conf 64368896699999888875899999849953899999993799887422035650478885335698579779999722
Q ss_pred ECCCCCEEEEEEECCCCCEEE
Q ss_conf 089873379999889971473
Q gi|254780548|r 410 KDGDTGSKLYSIDLNGRNETL 430 (447)
Q Consensus 410 ~~g~~~~~l~~~~~~G~~~~~ 430 (447)
.+|. .+++.+.++|....+
T Consensus 465 ~gg~--~qv~~~~v~G~~~~~ 483 (532)
T PRK13615 465 PDGE--RQVELHQVGGPSKDM 483 (532)
T ss_pred CCCC--EEEEEEECCCCCCCC
T ss_conf 7982--469999679854556
No 175
>KOG2919 consensus
Probab=97.24 E-value=0.014 Score=34.31 Aligned_cols=158 Identities=16% Similarity=0.209 Sum_probs=79.9
Q ss_pred EEEEEECCCCCEEEEEEECCCCCCCCCEEEE-CCCCCEEEEE-------CCCCCEEEEEECCCCCEEEEEECCCCCEEEE
Q ss_conf 2345576899848998503467644303771-1797179974-------3798524445515895567741378730389
Q gi|254780548|r 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDT-RIDRAPKRIG-------NFRSMILAPRFSSNGKRALISVQKDEAMDIY 285 (447)
Q Consensus 214 ~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~-~~g~~~~~~~-------~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~ 285 (447)
..+-.|||||.+| |.-|. .-|.++|+ +.|+.....+ ...|..+.-++||-..+..-.-+......||
T Consensus 161 AhsL~Fs~DGeql-faGyk----rcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy 235 (406)
T KOG2919 161 AHSLQFSPDGEQL-FAGYK----RCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIY 235 (406)
T ss_pred HEEEEECCCCCEE-EECCC----CEEEEEECCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCEEEECCCCEEEEE
T ss_conf 0367766987767-30244----337884035899877400011205444222356541168887514430113402357
Q ss_pred EEECCCCCCCC-CCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCC-----CCEEEEECCCCEEEEEECCCCC
Q ss_conf 98404774110-02577643202552167478997237765331576402567-----4111220353000046877688
Q gi|254780548|r 286 SVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD-----QKRISQDKEASYFDPVWSPQGD 359 (447)
Q Consensus 286 ~~d~~~~~~~~-lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~-----~~rlT~~~~~~~~~p~wSPdG~ 359 (447)
.- .++.+-+ |-.+.+--|...|.+||.++. +-.|- .+.|-..|+.-.. ..|-+.+.+.. .-....|+|+
T Consensus 236 ~~--~~~~pl~llggh~gGvThL~~~edGn~lf-sGaRk-~dkIl~WDiR~~~~pv~~L~rhv~~TNQR-I~FDld~~~~ 310 (406)
T KOG2919 236 ND--DGRRPLQLLGGHGGGVTHLQWCEDGNKLF-SGARK-DDKILCWDIRYSRDPVYALERHVGDTNQR-ILFDLDPKGE 310 (406)
T ss_pred EC--CCCCCEEEECCCCCCEEEEEECCCCCEEC-CCCCC-CCEEEEEEEHHCCCHHHHHHHHCCCCCCE-EEEECCCCCC
T ss_conf 64--89971023215678725677526767402-35557-87278986011011566654311676634-8984178876
Q ss_pred EEEEEECCCCCEEEEEEECCC-CCEE
Q ss_conf 899997149915799998899-9679
Q gi|254780548|r 360 LIAFTKFSGEKFAIGVMKKDG-SQER 384 (447)
Q Consensus 360 ~Iaf~~~~~~~~~i~~~~~~g-~~~~ 384 (447)
++| +...+|. |-+.|+++ +++.
T Consensus 311 ~La-sG~tdG~--V~vwdlk~~gn~~ 333 (406)
T KOG2919 311 ILA-SGDTDGS--VRVWDLKDLGNEV 333 (406)
T ss_pred EEE-CCCCCCC--EEEEECCCCCCCC
T ss_conf 641-1687761--7987537778763
No 176
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.21 E-value=0.015 Score=34.13 Aligned_cols=165 Identities=12% Similarity=0.103 Sum_probs=88.1
Q ss_pred EEEEEECCCCCEEEEEEECCCCC----CCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEE-E
Q ss_conf 23455768998489985034676----443037711797179974379852444551589556774137873038998-4
Q gi|254780548|r 214 LFEPRFSPNQQKVAYATYDDEDI----LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-D 288 (447)
Q Consensus 214 ~~sP~wSpDG~~Iay~s~~~~~~----~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~-d 288 (447)
+.+-+.|+||+.+|=++-..... ..+++-.+ +.........+ .-..|+|++||..+-.+ .||+.-+-+. +
T Consensus 351 ~~saavS~d~~~~AaV~~~~~~~~~~~~~L~~G~~--gg~~~~~l~~~-tLTrPSW~~~~d~~WtV--~DG~~vvR~~r~ 425 (590)
T PRK13616 351 QTSAALSRSGNVVAAVVTLGRGAPDPAASLWVGAL--GGEAVQVLEGH-SLTRPSWSLDADALWVV--VDGNTVVRVIRS 425 (590)
T ss_pred EEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCC--CCCCCEEECCC-CCCCCCCCCCCCEEEEE--ECCCCEEEEEEC
T ss_conf 35899858888589998437788764127860588--88741110477-54677277899669999--339824898831
Q ss_pred CCCCCCCCC-------CC-CCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEEC--CCCCCEEE------EECCCCEEEE
Q ss_conf 047741100-------25-77643202552167478997237765331576402--56741112------2035300004
Q gi|254780548|r 289 LQSNATERL-------TN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSN--GSDQKRIS------QDKEASYFDP 352 (447)
Q Consensus 289 ~~~~~~~~l-------T~-~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~--g~~~~rlT------~~~~~~~~~p 352 (447)
..+|+..+. +. ..+--++-..|.||-+++.+-| | |+|+--+. +....+|+ .+-.....+.
T Consensus 426 ~~~G~~~~~~Vd~~~l~~~~~g~Is~lRlS~DGvR~A~ivd--G--~v~vg~V~r~~~G~~~l~~~r~~~p~l~~~a~sl 501 (590)
T PRK13616 426 PATGQPARIPVDSSAVASRFPGPISELQLSRDGVRAAMIID--G--KVYLAVVEQTQPGQYALTYPRELGFGLGETAVSL 501 (590)
T ss_pred CCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEC--C--EEEEEEEEECCCCCEEEEEHHHHCCCCCCCEEEE
T ss_conf 78884377750110246568983469997788607999988--9--8999999826998578754154174546845773
Q ss_pred EECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECC
Q ss_conf 6877688899997149915799998899967996627
Q gi|254780548|r 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389 (447)
Q Consensus 353 ~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~ 389 (447)
.|++|+..++ .+.++...++.+..||.....+...
T Consensus 502 ~W~~~~~LvV--g~~~~~~pv~~V~~DGs~~s~~ps~ 536 (590)
T PRK13616 502 SWRTGDDILV--GRSDPDHPVWYVNLDGSNASDLPSR 536 (590)
T ss_pred EECCCCEEEE--EEECCCCEEEEEEECCCCCCCCCCC
T ss_conf 5558986999--7016987259998078666678875
No 177
>pfam03783 CsgG Curli production assembly/transport component CsgG. CsgG is an outer membrane-located lipoprotein that is highly resistant to protease digestion. During curli assembly, an adhesive surface fibre, CsgG is required to maintain the stability of CsgA and CsgB.
Probab=97.20 E-value=0.001 Score=41.96 Aligned_cols=76 Identities=25% Similarity=0.365 Sum_probs=49.4
Q ss_pred CCCEEEEECCCCCCC-------------CHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCCCCC---C--CHHHHHHC
Q ss_conf 642004630567753-------------03578999999862017514550865503466761114---5--77887415
Q gi|254780548|r 45 YSPVSIAFTKFVSID-------------ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSI---P--RFQDWNSL 106 (447)
Q Consensus 45 ~~pi~IAv~~f~~~~-------------~~~~~i~~ii~~DL~~SG~F~~i~~~~~~~~~~~~~~~---~--~f~~W~~~ 106 (447)
..+.+|||..|.+.. .++...+.++.+-|..+|.|.++++..+.+...+.... + .-..=..+
T Consensus 7 ~~k~~IAV~~F~d~Tgq~k~~~~~~~s~~vtqg~~~~Li~aL~~tg~F~VvER~~l~~l~~E~~l~~~~~~~~~~~~~l~ 86 (207)
T pfam03783 7 GGKPPIAVGRFKNQTGQYKPGNFSSFSDAVGQGASDILVTALQQSGWFTVLERENLDALLTERKIIRAGPNTAAQLGNLK 86 (207)
T ss_pred CCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 99965999401257688466464225630122399999999987799178843786888999998754765621035544
Q ss_pred CCCEEEEEEEEECC
Q ss_conf 62189999974046
Q gi|254780548|r 107 GAQVLVTGRVIKEG 120 (447)
Q Consensus 107 gad~lv~G~i~~~~ 120 (447)
+++|++.|.|..-+
T Consensus 87 ga~~~i~G~It~~~ 100 (207)
T pfam03783 87 GADYLIEGSITEFG 100 (207)
T ss_pred CCCEEEEEEEEEEC
T ss_conf 48889993677751
No 178
>KOG0307 consensus
Probab=97.18 E-value=0.008 Score=35.96 Aligned_cols=178 Identities=13% Similarity=0.232 Sum_probs=99.2
Q ss_pred CEEEEEECCCCCEEE-EEEEC---CCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCC--CEEEE
Q ss_conf 100123114554026-88621---7640234557689984899850346764430377117971799743798--52444
Q gi|254780548|r 190 KNSLCVMDRDGANIR-YLTPS---RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS--MILAP 263 (447)
Q Consensus 190 ~~~l~i~d~DG~n~~-~l~~~---~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~--~~~~p 263 (447)
.-+|||-|.. |+. +.+.+ .-..+..-+|..--++|.- |- .....+-+.|++..+..-.++...+ +.+.-
T Consensus 138 ~geI~iWDln--n~~tP~~~~~~~~~~eI~~lsWNrkvqhILA-S~--s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l 212 (1049)
T KOG0307 138 DGEILIWDLN--KPETPFTPGSQAPPSEIKCLSWNRKVSHILA-SG--SPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVL 212 (1049)
T ss_pred CCCEEEECCC--CCCCCCCCCCCCCCCCCEEECCCHHHHHHHH-CC--CCCCCCEECCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 8857774067--7678878888788354347523346667864-26--89997120324678863233457776411344
Q ss_pred EECCCCCEEEEEECCC-CCE--EEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCC-C
Q ss_conf 5515895567741378-730--38998404774110025776432025521674789972377653315764025674-1
Q gi|254780548|r 264 RFSSNGKRALISVQKD-EAM--DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-K 339 (447)
Q Consensus 264 ~wSPDG~~la~~~s~~-g~~--~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~-~ 339 (447)
.|+||+..-+.+.+.+ ..+ ++|-+.-.+..++-++.|.---.+-+|.|-+.+++.+|.+.++ |+..+.+++++ -
T Consensus 213 ~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~--ii~wN~~tgEvl~ 290 (1049)
T KOG0307 213 AWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNR--IICWNPNTGEVLG 290 (1049)
T ss_pred EECCCCCEEEEEECCCCCCCEEEEECCCCCCCCHHHHCCCCCCEEEECCCCCCCHHHHCCCCCCC--EEEECCCCCEEEE
T ss_conf 55787750456632787786257402245678303321345640430357788434310268887--2575488741752
Q ss_pred EEEEECCCCEEEEEECCCCC-EEEEEECCCCCEEEEEE
Q ss_conf 11220353000046877688-89999714991579999
Q gi|254780548|r 340 RISQDKEASYFDPVWSPQGD-LIAFTKFSGEKFAIGVM 376 (447)
Q Consensus 340 rlT~~~~~~~~~p~wSPdG~-~Iaf~~~~~~~~~i~~~ 376 (447)
.+...+++. ....|.|..- .++-.+.+ |...||.+
T Consensus 291 ~~p~~~nW~-fdv~w~pr~P~~~A~asfd-gkI~I~sl 326 (1049)
T KOG0307 291 ELPAQGNWC-FDVQWCPRNPSVMAAASFD-GKISIYSL 326 (1049)
T ss_pred ECCCCCCCE-EEEEECCCCCCHHHHHEEC-CCEEEEEE
T ss_conf 257778643-1246567783133454055-51344443
No 179
>KOG2106 consensus
Probab=97.18 E-value=0.016 Score=33.87 Aligned_cols=76 Identities=18% Similarity=0.311 Sum_probs=33.5
Q ss_pred EEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEC--CCCCCCCEECCCCCEEE
Q ss_conf 1576402567411122035300004687768889999714991579999889996799662--78755437887899899
Q gi|254780548|r 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLI 405 (447)
Q Consensus 328 iy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~--~~~~e~P~wSPDG~~i~ 405 (447)
.+++|.+....-.+-.+ .....-..+||||..+|.-+.++ -..||.++.+|....++-. +...-+--||+|+++++
T Consensus 430 w~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~-~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~ 507 (626)
T KOG2106 430 WFVLDTETQDLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDN-HIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLV 507 (626)
T ss_pred EEEEECCCCEEEEEEEC-CCCEEEEEECCCCCEEEEECCCC-EEEEEEECCCCCEEEEEEEECCCEEEEEEECCCCCEEE
T ss_conf 99995244105799855-88247999768887799863798-09999987898478885055376157755347886688
No 180
>KOG0307 consensus
Probab=97.10 E-value=0.0081 Score=35.94 Aligned_cols=114 Identities=18% Similarity=0.272 Sum_probs=60.3
Q ss_pred EEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCE-EEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCC
Q ss_conf 45576899848998503467644303771179717-99743798524445515895567741378730389984047741
Q gi|254780548|r 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294 (447)
Q Consensus 216 sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~-~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~ 294 (447)
.-.|.||+..-+-+.-++++.+-|-+.|++-...+ +.+..+.....+-+|+|-+.++++++.+|+ +|+.-|.+++++
T Consensus 211 ~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~--~ii~wN~~tgEv 288 (1049)
T KOG0307 211 VLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDN--RIICWNPNTGEV 288 (1049)
T ss_pred EEEECCCCCEEEEEECCCCCCCEEEEECCCCCCCCHHHHCCCCCCEEEECCCCCCCHHHHCCCCCC--CEEEECCCCCEE
T ss_conf 445578775045663278778625740224567830332134564043035778843431026888--725754887417
Q ss_pred C-CCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEE
Q ss_conf 1-002577643202552167478997237765331576
Q gi|254780548|r 295 E-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331 (447)
Q Consensus 295 ~-~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~ 331 (447)
- .+-........-.|.|---.++-.+-=.|.-+||-+
T Consensus 289 l~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl 326 (1049)
T KOG0307 289 LGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSL 326 (1049)
T ss_pred EEECCCCCCCEEEEEECCCCCCHHHHHEECCCEEEEEE
T ss_conf 52257778643124656778313345405551344443
No 181
>PRK13613 lipoprotein LpqB; Provisional
Probab=96.96 E-value=0.026 Score=32.56 Aligned_cols=79 Identities=18% Similarity=0.268 Sum_probs=53.7
Q ss_pred CEEEECCCCEEEEEECCCCCCCEEEEEE--CC-CCCCEEE--------EECCCCEEEEEECCCCCEEEEEECCCCCEEEE
Q ss_conf 0255216747899723776533157640--25-6741112--------20353000046877688899997149915799
Q gi|254780548|r 306 SASYSPDSSQIVFESDREGKEQLYVMQS--NG-SDQKRIS--------QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374 (447)
Q Consensus 306 ~p~~spDG~~I~f~Sdr~G~~qiy~~~~--~g-~~~~rlT--------~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~ 374 (447)
+-.-|+||-+++.+.+++|..+|++--+ ++ +....++ .+- ....+..|..+++.++-.+..++..+++
T Consensus 461 ~lrvSrDG~R~A~vv~~~g~~~l~v~~V~R~~~g~~~~v~l~~~~~~~~~l-~~v~~vsW~~~~~LvVlg~~~~g~~~v~ 539 (603)
T PRK13613 461 ELRVSADGVRIALLVEKDGKTSLLIGRVERGGKAVSPTVSVLELRSAAPQL-EEVTAMSWAGDSRLVVVGREEGGVQQAR 539 (603)
T ss_pred EEEECCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCEECCCCEECCCCC-CCEEEEEECCCCEEEEEECCCCCCCEEE
T ss_conf 999658873799999528962799999983798877615123434046665-6156657827986999843589853039
Q ss_pred EEECCCCCEEE
Q ss_conf 99889996799
Q gi|254780548|r 375 VMKKDGSQERL 385 (447)
Q Consensus 375 ~~~~~g~~~~~ 385 (447)
.++.||.....
T Consensus 540 ~V~vDGs~~~~ 550 (603)
T PRK13613 540 YVQVDGSTPST 550 (603)
T ss_pred EEECCCCCCCC
T ss_conf 99836856887
No 182
>KOG0639 consensus
Probab=96.93 E-value=0.0056 Score=36.98 Aligned_cols=31 Identities=13% Similarity=0.243 Sum_probs=13.3
Q ss_pred EECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEEC
Q ss_conf 788789989999950898733799998899714733
Q gi|254780548|r 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431 (447)
Q Consensus 396 ~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~~~ 431 (447)
..+|.|.+++-- .. +...++...+|..+.++
T Consensus 599 g~cP~~dWlavG-Me----ns~vevlh~skp~kyql 629 (705)
T KOG0639 599 GYCPTGDWLAVG-ME----NSNVEVLHTSKPEKYQL 629 (705)
T ss_pred CCCCCCCCEEEE-CC----CCCEEEEECCCCCCEEE
T ss_conf 668986622452-14----67479875178611231
No 183
>KOG2100 consensus
Probab=96.80 E-value=0.035 Score=31.72 Aligned_cols=102 Identities=11% Similarity=0.136 Sum_probs=49.6
Q ss_pred CEEEECCCC-EEEEEECCCC-CCCEEEEEECCC-CCCEEEEECCCCE-EEEEECCCCCEEEEEECCC--CCEEEEEEECC
Q ss_conf 025521674-7899723776-533157640256-7411122035300-0046877688899997149--91579999889
Q gi|254780548|r 306 SASYSPDSS-QIVFESDREG-KEQLYVMQSNGS-DQKRISQDKEASY-FDPVWSPQGDLIAFTKFSG--EKFAIGVMKKD 379 (447)
Q Consensus 306 ~p~~spDG~-~I~f~Sdr~G-~~qiy~~~~~g~-~~~rlT~~~~~~~-~~p~wSPdG~~Iaf~~~~~--~~~~i~~~~~~ 379 (447)
.|.++.|+. ...+.+.+.+ ..++......++ ..+.+|.+ .+.. .-+.|+.|.+.|.|....+ +..++|.+++.
T Consensus 344 ~~~~~~d~~~~~~~~~~~~~~~~hi~~~~~~~~~~~~~lt~g-~w~v~~i~~~~~~~~~i~f~~~~~~~~~~~ly~i~~~ 422 (755)
T KOG2100 344 EPVFSSDGSSYLKVDSVSDGGYNHIAYLKLSNGSEPRMLTSG-NWEVTSILGYDKDSNRIYFDAYEEDPSERHLYSISLG 422 (755)
T ss_pred CEEEEECCCEEEEEEECCCCCEEEEEEEECCCCCCEEECCCC-CCEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEECC
T ss_conf 405655277168998425686014699864898753001445-7479871222687756989703667874237999646
Q ss_pred CCCEEEEECCCCCC-----CCEECCCCCEEEEEE
Q ss_conf 99679966278755-----437887899899999
Q gi|254780548|r 380 GSQERLLVEDSNLQ-----APTWSPSGRSLIFSR 408 (447)
Q Consensus 380 g~~~~~lt~~~~~e-----~P~wSPDG~~i~f~~ 408 (447)
+.....+|.....+ +.++++.+++++...
T Consensus 423 ~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~v~~~ 456 (755)
T KOG2100 423 SGTVESLTCSLITGPCTYLSVSFSKSAKYYVLSC 456 (755)
T ss_pred CCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEE
T ss_conf 5754321015788743899864587402899950
No 184
>KOG1063 consensus
Probab=96.78 E-value=0.022 Score=32.97 Aligned_cols=68 Identities=15% Similarity=0.189 Sum_probs=26.0
Q ss_pred EEEEECCCCCEEEEEEECCCCCCCCCE-EEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEE
Q ss_conf 345576899848998503467644303-77117971799743798524445515895567741378730389
Q gi|254780548|r 215 FEPRFSPNQQKVAYATYDDEDILRVYL-MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285 (447)
Q Consensus 215 ~sP~wSpDG~~Iay~s~~~~~~~~i~~-~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~ 285 (447)
+.--|+|++.-|.--+|. +..++|- .|..--.....+..+-+..-...|+|.|+.|+ +.+.|..+.||
T Consensus 320 ~g~lw~~n~~~ii~~g~~--Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflL-svs~DQTTRlF 388 (764)
T KOG1063 320 WGGLWSPNSNVIIAHGRT--GGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLL-SVSLDQTTRLF 388 (764)
T ss_pred EEEEECCCCCEEEEECCC--CCEEEEECCCCCCEEECCCCCCCCCCCEEEEECCCCCEEE-EECCCCCEEEE
T ss_conf 368983888889993156--7379973167661355354555546602101368887899-82255305330
No 185
>KOG3617 consensus
Probab=96.76 E-value=0.013 Score=34.63 Aligned_cols=21 Identities=19% Similarity=0.330 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHCC---CCEEECCH
Q ss_conf 8999999862017---51455086
Q gi|254780548|r 64 KVSEVVSKDLQRS---DVFNLISQ 84 (447)
Q Consensus 64 ~i~~ii~~DL~~S---G~F~~i~~ 84 (447)
+...++..+|... --|++..+
T Consensus 137 q~~~~~~hel~~~ltl~cfRL~~~ 160 (1416)
T KOG3617 137 QTSNIMQHELNDQLTLWCFRLSYD 160 (1416)
T ss_pred CCCHHHHHHHHCEEEEEEEECCCC
T ss_conf 254365667641005789953888
No 186
>KOG0278 consensus
Probab=96.74 E-value=0.038 Score=31.40 Aligned_cols=176 Identities=16% Similarity=0.152 Sum_probs=100.6
Q ss_pred EEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCC
Q ss_conf 00123114554026886217640234557689984899850346764430377117971799743798524445515895
Q gi|254780548|r 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270 (447)
Q Consensus 191 ~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~ 270 (447)
-++|.++.--+-++.+-.+...| ...-|-..-+.|.= | ...+ .|-++|.++|.+.+.| .++....+...|+||+
T Consensus 124 lrvfdln~p~App~E~~ghtg~I-r~v~wc~eD~~iLS-S-add~--tVRLWD~rTgt~v~sL-~~~s~VtSlEvs~dG~ 197 (334)
T KOG0278 124 LRVFDLNRPKAPPKEISGHTGGI-RTVLWCHEDKCILS-S-ADDK--TVRLWDHRTGTEVQSL-EFNSPVTSLEVSQDGR 197 (334)
T ss_pred HHHHHCCCCCCCHHHHCCCCCCC-EEEEEECCCCEEEE-E-CCCC--CEEEEEECCCCEEEEE-ECCCCCCEEEECCCCC
T ss_conf 55563258889906655898760-46898715866876-0-3788--3687872168378777-6489986146625897
Q ss_pred EEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCC-CCEEEEEECCCCCCEEE-EECCCC
Q ss_conf 5677413787303899840477411002577643202552167478997237765-33157640256741112-203530
Q gi|254780548|r 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-EQLYVMQSNGSDQKRIS-QDKEAS 348 (447)
Q Consensus 271 ~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~-~qiy~~~~~g~~~~rlT-~~~~~~ 348 (447)
.|..+ +|.+-+| .|..+=.+-+--.-+..-.+++.+|+- =.|+. +|. --+|+.|.++++..-.- .+..+.
T Consensus 198 ilTia---~gssV~F-wdaksf~~lKs~k~P~nV~SASL~P~k--~~fVa--Gged~~~~kfDy~TgeEi~~~nkgh~gp 269 (334)
T KOG0278 198 ILTIA---YGSSVKF-WDAKSFGLLKSYKMPCNVESASLHPKK--EFFVA--GGEDFKVYKFDYNTGEEIGSYNKGHFGP 269 (334)
T ss_pred EEEEE---CCCEEEE-ECCCCCCHHHHCCCCCCCCCCCCCCCC--CEEEE--CCCCEEEEEEECCCCCEEEECCCCCCCC
T ss_conf 89995---2863687-534223201013576430023226887--43886--5861479987335765120013688784
Q ss_pred EEEEEECCCCCEEEEEECCCCCEEEEEEECCCC
Q ss_conf 000468776888999971499157999988999
Q gi|254780548|r 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381 (447)
Q Consensus 349 ~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~ 381 (447)
.....+||||..-| +..++|...|+.+.+...
T Consensus 270 VhcVrFSPdGE~yA-sGSEDGTirlWQt~~~~~ 301 (334)
T KOG0278 270 VHCVRFSPDGELYA-SGSEDGTIRLWQTTPGKT 301 (334)
T ss_pred EEEEEECCCCCEEE-CCCCCCEEEEEEECCCCC
T ss_conf 47898789982574-037885189998248876
No 187
>KOG1445 consensus
Probab=96.73 E-value=0.039 Score=31.35 Aligned_cols=28 Identities=7% Similarity=0.340 Sum_probs=11.9
Q ss_pred EECC-CCCEEEEEECCCCCEEEEEEECCCC
Q ss_conf 5515-8955677413787303899840477
Q gi|254780548|r 264 RFSS-NGKRALISVQKDEAMDIYSVDLQSN 292 (447)
Q Consensus 264 ~wSP-DG~~la~~~s~~g~~~I~~~d~~~~ 292 (447)
.|.| |-.+||+ ...+|..+||.+..++.
T Consensus 634 ~WdPFD~~rLAV-a~ddg~i~lWr~~a~gl 662 (1012)
T KOG1445 634 HWDPFDDERLAV-ATDDGQINLWRLTANGL 662 (1012)
T ss_pred CCCCCCHHHEEE-CCCCCEEEEEEECCCCC
T ss_conf 558888577021-02675689998516897
No 188
>KOG2106 consensus
Probab=96.66 E-value=0.043 Score=31.07 Aligned_cols=68 Identities=16% Similarity=0.273 Sum_probs=39.0
Q ss_pred EEEEEECCCCCEEEEECCCCCC---CCEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEECCC-CC-CCCCCCCCC
Q ss_conf 7999988999679966278755---4378878998999995089873379999889971473367-88-736753165
Q gi|254780548|r 372 AIGVMKKDGSQERLLVEDSNLQ---APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PA-YASDPQWVG 444 (447)
Q Consensus 372 ~i~~~~~~g~~~~~lt~~~~~e---~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~~~~~-~g-~~~~P~WsP 444 (447)
..+++|.++....++-.. +| ...+||||.+++-.+.. + ...||.++.+|+.-..+.. .| -...-.||+
T Consensus 429 ~w~V~d~e~~~lv~~~~d--~~~ls~v~ysp~G~~lAvgs~d-~--~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~ 501 (626)
T KOG2106 429 RWFVLDTETQDLVTIHTD--NEQLSVVRYSPDGAFLAVGSHD-N--HIYIYRVSANGRKYSRVGKCSGSPITHLDWSS 501 (626)
T ss_pred EEEEEECCCCEEEEEEEC--CCCEEEEEECCCCCEEEEECCC-C--EEEEEEECCCCCEEEEEEEECCCEEEEEEECC
T ss_conf 599995244105799855--8824799976888779986379-8--09999987898478885055376157755347
No 189
>KOG0268 consensus
Probab=96.64 E-value=0.042 Score=31.18 Aligned_cols=174 Identities=16% Similarity=0.251 Sum_probs=94.4
Q ss_pred CCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCC-CCCCCC-CCCCCCEEEECCCCE
Q ss_conf 430377117971799743798524445515895567741378730389984047741-100257-764320255216747
Q gi|254780548|r 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNT-LFINISASYSPDSSQ 315 (447)
Q Consensus 238 ~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~-~~lT~~-~~~d~~p~~spDG~~ 315 (447)
+|-++|.......+.+.-.-....+..|+|--..|+-+...|+ .|+++|+..+.+ +.++-. +.+ .-+|+| +-
T Consensus 168 ~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDr--sIvLyD~R~~~Pl~KVi~~mRTN--~IswnP--ea 241 (433)
T KOG0268 168 QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDR--SIVLYDLRQASPLKKVILTMRTN--TICWNP--EA 241 (433)
T ss_pred EEEECCCCCCCCCCEEECCCCCEEEEECCCCCCCEEEEECCCC--CEEEEECCCCCCCCEEEEECCCC--CEECCC--CC
T ss_conf 0455041347841201427883357860787630024303678--46888612477322135512236--300275--32
Q ss_pred EEEEECCCCCCCEEEEEECCCC-CCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCC---C
Q ss_conf 8997237765331576402567-41112203530000468776888999971499157999988999679966278---7
Q gi|254780548|r 316 IVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS---N 391 (447)
Q Consensus 316 I~f~Sdr~G~~qiy~~~~~g~~-~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~~---~ 391 (447)
..|++.- ....||..|..--. +-.+-.+......+..+||-|+-++--+.+. .|-++....+.-|-+.... +
T Consensus 242 fnF~~a~-ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDk---sIRIf~~~~~~SRdiYhtkRMq~ 317 (433)
T KOG0268 242 FNFVAAN-EDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDK---SIRIFPVNHGHSRDIYHTKRMQH 317 (433)
T ss_pred CCEEECC-CCCCCEEHHHHHHCCCCHHHCCCCEEEEEECCCCCCCHHCCCCCCC---EEEEEECCCCCCHHHHHHHHHHE
T ss_conf 2022125-6542000203542253011026540589732178773000133465---07986258885333566765331
Q ss_pred CCCCEECCCCCEEEEEEEECCCCCEEEEEEECC
Q ss_conf 554378878998999995089873379999889
Q gi|254780548|r 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424 (447)
Q Consensus 392 ~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~ 424 (447)
.-...||-|.++|+- ...++ +-.||...+.
T Consensus 318 V~~Vk~S~Dskyi~S-GSdd~--nvRlWka~As 347 (433)
T KOG0268 318 VFCVKYSMDSKYIIS-GSDDG--NVRLWKAKAS 347 (433)
T ss_pred EEEEEEECCCCEEEE-CCCCC--CEEEEECCHH
T ss_conf 247987146527996-68876--3332210005
No 190
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain; InterPro: IPR013476 Methylamine dehydrogenase is a periplasmic enzyme found in Gram-negative methylotrophs . It is induced when grown on methylamine as a growth substrate and catalyses the oxidative deamination of primary amines to their corresponding aldehydes. ; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0042597 periplasmic space.
Probab=96.63 E-value=0.045 Score=30.92 Aligned_cols=256 Identities=16% Similarity=0.230 Sum_probs=147.2
Q ss_pred CCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEE--E----CCCCCCCCCEEEEC
Q ss_conf 55441788751367644210012311455402688621764023455768998489985--0----34676443037711
Q gi|254780548|r 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT--Y----DDEDILRVYLMDTR 245 (447)
Q Consensus 172 ~f~triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s--~----~~~~~~~i~~~~~~ 245 (447)
+-++|=+||..=+. =....+.|+.| |...+.|--.....+-+|..+-||+-++-.+ | ++++.--|.+.|..
T Consensus 16 ~~da~RVyV~DP~~-F~~~~~~y~ID--G~~~~~~G~~D~G~L~N~~vasDG~F~~~a~T~y~RiARGkR~DYvE~~D~~ 92 (360)
T TIGR02658 16 ASDAKRVYVLDPGH-FAAVSTVYTID--GEKARLLGMTDGGKLPNVVVASDGKFLATASTVYSRIARGKRDDYVELIDPQ 92 (360)
T ss_pred CCCCCEEEEECCCC-EEEEEEEEEEE--CCCCCEEEEECCCCCCCCEEECCCCEEEEEEEEEEEECCCCCCCEEEEECCC
T ss_conf 86451689856986-15888999997--7877388861488247626814874676520047651168865328977256
Q ss_pred CCCCEEEEECCCC-------CEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEE
Q ss_conf 7971799743798-------524445515895567741378730389984047741100257764320255216747899
Q gi|254780548|r 246 IDRAPKRIGNFRS-------MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318 (447)
Q Consensus 246 ~g~~~~~~~~~~~-------~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f 318 (447)
+.....-+.=..+ ++...+.|||+|.|+|.. ..-.|-+=++||+++.-.|+.+-|- . -..-|-...-.|
T Consensus 93 t~~p~ADI~~P~~PRFL~G~~~~~~~L~~d~K~lLF~Q-FsP~PaVG~VDL~~K~F~~~~~vPD--C-Y~IFP~~n~~Ff 168 (360)
T TIGR02658 93 THKPIADIDLPEGPRFLVGVYPRMASLSPDNKTLLFYQ-FSPSPAVGLVDLEGKAFVKMLDVPD--C-YHIFPTANDTFF 168 (360)
T ss_pred CCCEEEEEECCCCCEEEEECCCHHEECCCCCCEEEEEE-CCCCCCEEEEECCCCCEEEEECCCC--C-CEEECCCCCCEE
T ss_conf 57605445678887356741210101355775688983-3888820468847764012213888--6-413067789606
Q ss_pred EECCCCCCCEEEEEECCCCC-CEEE----EECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCE---EEEECCC
Q ss_conf 72377653315764025674-1112----20353000046877688899997149915799998899967---9966278
Q gi|254780548|r 319 ESDREGKEQLYVMQSNGSDQ-KRIS----QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE---RLLVEDS 390 (447)
Q Consensus 319 ~Sdr~G~~qiy~~~~~g~~~-~rlT----~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~---~~lt~~~ 390 (447)
..=|.|+-+=+.++.+|... .+-| .+.+|-...|.+|+...+++.=...|..|++-+-+-+-.-. ..+|+.-
T Consensus 169 MHCRDGSL~~~~~~~~G~~~p~k~T~~FH~E~eyL~~~P~YS~~~grLvWPTY~GkIfQ~~Ls~~~a~Fl~~~E~fT~~E 248 (360)
T TIGR02658 169 MHCRDGSLLKVGYDSKGNSKPIKPTKVFHKEDEYLINNPAYSNKSGRLVWPTYEGKIFQIDLSSKDAKFLKAIEAFTDAE 248 (360)
T ss_pred EEECCCCEEEEEECCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHH
T ss_conf 88015540335555788716653215530756224437633078882664410675899984468751010445533367
Q ss_pred CCCCCEECCCC-CEEEEEEEECC--------------CCCEEEEEEEC-CCCCEEECCCCCC
Q ss_conf 75543788789-98999995089--------------87337999988-9971473367887
Q gi|254780548|r 391 NLQAPTWSPSG-RSLIFSRKKDG--------------DTGSKLYSIDL-NGRNETLINTPAY 436 (447)
Q Consensus 391 ~~e~P~wSPDG-~~i~f~~~~~g--------------~~~~~l~~~~~-~G~~~~~~~~~g~ 436 (447)
. .-.|.|-| +.|+|...++- ....-++++|. +|+..+.+....|
T Consensus 249 k--~~~WrPGGWQ~vAyH~~~~~iylL~DQR~~w~H~~~SR~~fV~Da~tGkRl~~iel~HE 308 (360)
T TIGR02658 249 K--KDGWRPGGWQQVAYHKARDEIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELKHE 308 (360)
T ss_pred H--HCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCEE
T ss_conf 7--55687787322567721473899861200033456512899996787731100211112
No 191
>KOG0643 consensus
Probab=96.63 E-value=0.046 Score=30.91 Aligned_cols=178 Identities=18% Similarity=0.174 Sum_probs=81.5
Q ss_pred CCEEEEEEEEECCCCEEEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC
Q ss_conf 21899999740466225789998415554200002323377788999999989999975044555544178875136764
Q gi|254780548|r 108 AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187 (447)
Q Consensus 108 ad~lv~G~i~~~~~~~~~v~~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~f~triafv~~~~~~~ 187 (447)
..+|++|+- + -..+||||.+||++..-.+..... ..-.. .-++.|+++++.....
T Consensus 64 S~~liTGSA----D----~t~kLWDv~tGk~la~~k~~~~Vk---~~~F~--------------~~gn~~l~~tD~~mg~ 118 (327)
T KOG0643 64 SKHLITGSA----D----QTAKLWDVETGKQLATWKTNSPVK---RVDFS--------------FGGNLILASTDKQMGY 118 (327)
T ss_pred CCEEEECCC----C----CEEEEEECCCCCEEEEEECCCEEE---EEEEC--------------CCCCEEEEEEHHHCCC
T ss_conf 130563466----5----506888737884899845697157---87752--------------6996899985343586
Q ss_pred CC---CEEEEEE--CCCCCEE-EEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEE-ECCCCCE
Q ss_conf 42---1001231--1455402-68862176402345576899848998503467644303771179717997-4379852
Q gi|254780548|r 188 II---KNSLCVM--DRDGANI-RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GNFRSMI 260 (447)
Q Consensus 188 ~~---~~~l~i~--d~DG~n~-~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~-~~~~~~~ 260 (447)
.. .++|... +.|-..| +.|. -+++-+.+.-|+|-|+.|.+- .....|-.+|+++|.....- ..+....
T Consensus 119 ~~~v~~fdi~~~~~~~~seep~~kI~-~~~skit~a~Wg~l~~~ii~G----he~G~is~~Da~~g~~~v~s~~~h~~~I 193 (327)
T KOG0643 119 TCFVSVFDIRDDSSDIDSEEPYLKIP-TPDSKITSALWGPLGETIIAG----HEDGSISIYDARTGKELVDSDEEHSSKI 193 (327)
T ss_pred CEEEEEEECCCCHHHCCCCCCEEEEC-CCCCCEEEEEECCCCCEEEEE----CCCCCEEEEECCCCCEEEECHHHHHCCC
T ss_conf 22799998257732302468569955-776640055514567779981----6888587887136807631111220222
Q ss_pred EEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEE
Q ss_conf 4445515895567741378730389984047741100257764320255216747899
Q gi|254780548|r 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318 (447)
Q Consensus 261 ~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f 318 (447)
..-.+|||.... ++.++|.+..|+-+..-.-..+-.|..|- + .++.+|--+.++.
T Consensus 194 nd~q~s~d~T~F-iT~s~Dttakl~D~~tl~v~Kty~te~Pv-N-~aaisP~~d~Vil 248 (327)
T KOG0643 194 NDLQFSRDRTYF-ITGSKDTTAKLVDVRTLEVLKTYTTERPV-N-TAAISPLLDHVIL 248 (327)
T ss_pred CCCCCCCCCCEE-EECCCCCCCEEEECCCEEEEEEEEECCCC-C-CCCCCCCCCEEEE
T ss_conf 322006775368-85156763135630111467776403542-2-0002566424896
No 192
>KOG0640 consensus
Probab=96.62 E-value=0.047 Score=30.85 Aligned_cols=194 Identities=15% Similarity=0.217 Sum_probs=95.1
Q ss_pred CCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEEC-----CCCCEEEEEECCCCCEEEEEECCCCCEE
Q ss_conf 17640234557689984899850346764430377117971799743-----7985244455158955677413787303
Q gi|254780548|r 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN-----FRSMILAPRFSSNGKRALISVQKDEAMD 283 (447)
Q Consensus 209 ~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~-----~~~~~~~p~wSPDG~~la~~~s~~g~~~ 283 (447)
..++ +.+-+|.|.|..|+--+ +.+-+.+||+.+-+- .+.. +.+..-...+|+.| +|..+.++||...
T Consensus 215 d~~~-vrsiSfHPsGefllvgT----dHp~~rlYdv~T~Qc--fvsanPd~qht~ai~~V~Ys~t~-~lYvTaSkDG~Ik 286 (430)
T KOG0640 215 DTEP-VRSISFHPSGEFLLVGT----DHPTLRLYDVNTYQC--FVSANPDDQHTGAITQVRYSSTG-SLYVTASKDGAIK 286 (430)
T ss_pred CCCE-EEEEEECCCCCEEEEEC----CCCCEEEEECCCEEE--EEECCCCCCCCCCEEEEEECCCC-CEEEEECCCCCEE
T ss_conf 2320-34676448876699725----898406872001267--64158653454424678755875-1899851678678
Q ss_pred EEEEECCCCCCCCCCC--CCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCC------EEEEEEC
Q ss_conf 8998404774110025--7764320255216747899723776533157640256741112203530------0004687
Q gi|254780548|r 284 IYSVDLQSNATERLTN--TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS------YFDPVWS 355 (447)
Q Consensus 284 I~~~d~~~~~~~~lT~--~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~------~~~p~wS 355 (447)
||- .+.++-++.+-+ +.+--.++.|+.+|+.|. +|..... ++...+.++..-. ++-|.+. .....|.
T Consensus 287 lwD-GVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiL-sSG~DS~--vkLWEi~t~R~l~-~YtGAg~tgrq~~rtqAvFN 361 (430)
T KOG0640 287 LWD-GVSNRCVRTIGNAHGGSEVCSAVFTKNGKYIL-SSGKDST--VKLWEISTGRMLK-EYTGAGTTGRQKHRTQAVFN 361 (430)
T ss_pred EEC-CCCHHHHHHHHHHCCCCEEEEEEECCCCEEEE-ECCCCCE--EEEEEECCCCEEE-EEECCCCCCCHHHHHHHHHC
T ss_conf 623-52478888877515874356679704870896-0487422--4556502793678-77357754313321020104
Q ss_pred CCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCCCCCEE---CCCCCEEEEEEEECCCCCEEEEE
Q ss_conf 768889999714991579999889996799662787554378---87899899999508987337999
Q gi|254780548|r 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW---SPSGRSLIFSRKKDGDTGSKLYS 420 (447)
Q Consensus 356 PdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~~~~e~P~w---SPDG~~i~f~~~~~g~~~~~l~~ 420 (447)
..-+++.|.... .-.+..+|..+...+.|-.-+++..+.| ||.+- +|.+-.+.. ....|-
T Consensus 362 htEdyVl~pDEa--s~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p--~FmTcsdD~-raRFWy 424 (430)
T KOG0640 362 HTEDYVLFPDEA--SNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEP--AFMTCSDDF-RARFWY 424 (430)
T ss_pred CCCCEEECCCCC--CCCEEECCCCCHHHHHHCCCCCCCCCEEEEECCCCC--CEEEECCCC-EEEEEE
T ss_conf 764369733225--572542026543454310257888734898579887--016642664-022566
No 193
>KOG1009 consensus
Probab=96.60 E-value=0.048 Score=30.76 Aligned_cols=61 Identities=23% Similarity=0.271 Sum_probs=28.1
Q ss_pred HHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEE
Q ss_conf 99999750445555441788751367644210012311455402688621764023455768998489985
Q gi|254780548|r 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230 (447)
Q Consensus 160 d~i~~~ltG~~G~f~triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s 230 (447)
++||+..=+..+-|. ++ -+.. ..+++.|..-.+...+...++..+.--+|-|-++.|+-.|
T Consensus 124 ~diydL~Ws~d~~~l---~s--~s~d-----ns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s 184 (434)
T KOG1009 124 DDIYDLAWSPDSNFL---VS--GSVD-----NSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKS 184 (434)
T ss_pred CCHHHHHCCCCCCEE---EE--EECC-----CEEEEEEECCCEEEEECCCCCCCCCEEECCHHHHHHHHHC
T ss_conf 322223106777514---66--1034-----3279998404516760256654214043264454564422
No 194
>KOG0269 consensus
Probab=96.51 E-value=0.054 Score=30.41 Aligned_cols=158 Identities=16% Similarity=0.164 Sum_probs=71.6
Q ss_pred HHHHHCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
Q ss_conf 88741562189999974046622578999841555420000232337778899999998999997504455554417887
Q gi|254780548|r 101 QDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180 (447)
Q Consensus 101 ~~W~~~gad~lv~G~i~~~~~~~~~v~~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~f~triafv 180 (447)
-+|...-..+|+.|+ .++.+ .+||....+-.. .|.+.-+..|.+.--.++ .- .|+
T Consensus 139 ldfh~tep~iliSGS----QDg~v----K~~DlR~~~S~~--t~~~nSESiRDV~fsp~~---------~~------~F~ 193 (839)
T KOG0269 139 LDFHSTEPNILISGS----QDGTV----KCWDLRSKKSKS--TFRSNSESIRDVKFSPGY---------GN------KFA 193 (839)
T ss_pred EEECCCCCCEEEECC----CCCEE----EEEEEECCCCCC--CCCCCCHHHHCEEECCCC---------CC------EEE
T ss_conf 552168761798527----77547----877630266522--321552143122414688---------86------678
Q ss_pred EECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCC-CC
Q ss_conf 51367644210012311455402688621764023455768998489985034676443037711797179974379-85
Q gi|254780548|r 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-SM 259 (447)
Q Consensus 181 ~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~-~~ 259 (447)
+-. +++.-++|=+-.--.-.++++-++++ ++.-.|+|++..||= .++...|-+++..+++....++-.. ..
T Consensus 194 s~~---dsG~lqlWDlRqp~r~~~k~~AH~Gp-V~c~nwhPnr~~lAT----GGRDK~vkiWd~t~~~~~~~~tInTiap 265 (839)
T KOG0269 194 SIH---DSGYLQLWDLRQPDRCEKKLTAHNGP-VLCLNWHPNREWLAT----GGRDKMVKIWDMTDSRAKPKHTINTIAP 265 (839)
T ss_pred EEC---CCCEEEEEECCCCHHHHHHHHCCCCC-EEEEEECCCCCEEEE----CCCCCCEEEEECCCCCCCCEEEEEECCE
T ss_conf 861---78647876446703678776404686-588753698765643----4877627988656887663368860320
Q ss_pred EEEEEECCCCCEEEEEECCCCCEEEEEEECCC
Q ss_conf 24445515895567741378730389984047
Q gi|254780548|r 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291 (447)
Q Consensus 260 ~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~ 291 (447)
..-..|-|+-...+-+.+--+...|++.|+.-
T Consensus 266 v~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrR 297 (839)
T KOG0269 266 VGRVKWRPARSYHLATCSMVVDTSVHVWDVRR 297 (839)
T ss_pred EEEEEECCCCCCHHHHHHCCCCCEEEEEEECC
T ss_conf 01466256763301010103442379985036
No 195
>KOG0299 consensus
Probab=96.49 E-value=0.056 Score=30.32 Aligned_cols=70 Identities=17% Similarity=0.214 Sum_probs=40.8
Q ss_pred CEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEE
Q ss_conf 023455768998489985034676443037711797179974379852444551589556774137873038998
Q gi|254780548|r 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287 (447)
Q Consensus 213 ~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~ 287 (447)
-+++-+.||||+.||+- +....|.+++..+.+..+..+.+.+..++-.|- +|..-.|+.+.|..-.+|.+
T Consensus 204 eil~~avS~Dgkylatg----g~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr-~gt~~lys~s~Drsvkvw~~ 273 (479)
T KOG0299 204 EILTLAVSSDGKYLATG----GRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFR-KGTSELYSASADRSVKVWSI 273 (479)
T ss_pred EEEEEEECCCCCEEEEC----CCCCEEEEECCCCCCHHHCCCCCCCCEEEEEEE-CCCCCEEEEECCCCEEEEEH
T ss_conf 15899974787189965----887569993276653111035655522554332-37610056423773589754
No 196
>KOG2041 consensus
Probab=96.48 E-value=0.032 Score=31.90 Aligned_cols=144 Identities=16% Similarity=0.272 Sum_probs=60.6
Q ss_pred CCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEE-EEEECCCCCEEEEEECCCCCEEEEEEE
Q ss_conf 7640234557689984899850346764430377117971799743798524-445515895567741378730389984
Q gi|254780548|r 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-APRFSSNGKRALISVQKDEAMDIYSVD 288 (447)
Q Consensus 210 ~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~-~p~wSPDG~~la~~~s~~g~~~I~~~d 288 (447)
+.+.+.|-+|.-||++|+-+ |+++. |-+-.+. |.+. --...+|... -..||||.+.++|... +|...|| |
T Consensus 114 nKSvV~SmsWn~dG~kIcIv-YeDGa---vIVGsvd-GNRI-wgKeLkg~~l~hv~ws~D~~~~Lf~~a-nge~hly--d 184 (1189)
T KOG2041 114 NKSVVVSMSWNLDGTKICIV-YEDGA---VIVGSVD-GNRI-WGKELKGQLLAHVLWSEDLEQALFKKA-NGETHLY--D 184 (1189)
T ss_pred CCCEEEEEEECCCCCEEEEE-ECCCC---EEEEEEC-CCEE-CCHHCCHHECCCEEECCCHHHHHHHHC-CCCEEEE--C
T ss_conf 75179998872789679999-72687---8997404-6632-051202102201020654788886641-7837875--2
Q ss_pred CCCCCCCCCCCCCCCCCCEEEE--------------------CCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCC
Q ss_conf 0477411002577643202552--------------------16747899723776533157640256741112203530
Q gi|254780548|r 289 LQSNATERLTNTLFINISASYS--------------------PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348 (447)
Q Consensus 289 ~~~~~~~~lT~~~~~d~~p~~s--------------------pDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~ 348 (447)
-.+.-.++|-....++....+| ||--.++- .-..|+-||-+-. +..++.-+. .|-+.
T Consensus 185 nqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lav-cy~nGr~QiMR~e-ND~~Pvv~d-tgm~~ 261 (1189)
T KOG2041 185 NQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAV-CYANGRMQIMRSE-NDPEPVVVD-TGMKI 261 (1189)
T ss_pred CCCCHHHHHHHCEEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCEEEE-EECCCEEHHHHHC-CCCCCEEEE-CCCEE
T ss_conf 64508776332127752353147875343135226862458999977999-9718600024424-999976872-36476
Q ss_pred EEEEEECCCCCEEEEEEC
Q ss_conf 000468776888999971
Q gi|254780548|r 349 YFDPVWSPQGDLIAFTKF 366 (447)
Q Consensus 349 ~~~p~wSPdG~~Iaf~~~ 366 (447)
....|+|+|..+|....
T Consensus 262 -vgakWnh~G~vLAvcG~ 278 (1189)
T KOG2041 262 -VGAKWNHNGAVLAVCGN 278 (1189)
T ss_pred -ECCEECCCCCEEEECCC
T ss_conf -24365689838997157
No 197
>KOG1034 consensus
Probab=96.47 E-value=0.047 Score=30.85 Aligned_cols=60 Identities=20% Similarity=0.359 Sum_probs=33.8
Q ss_pred CCCCCEEEEEECCCCCEEEEEEECCCCCE---EEEECC---CCCCCCEECCCCCEEEEEEEECCCCCEEEEEEE
Q ss_conf 77688899997149915799998899967---996627---875543788789989999950898733799998
Q gi|254780548|r 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQE---RLLVED---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422 (447)
Q Consensus 355 SPdG~~Iaf~~~~~~~~~i~~~~~~g~~~---~~lt~~---~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~ 422 (447)
-|-++++|.- .+.| .+|+.|++..++ ..|+.. .....-+||.||+.|++..+ ++ .+|..|
T Consensus 316 d~~~~~la~g-nq~g--~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcd-d~----~Vwrwd 381 (385)
T KOG1034 316 DPWQKMLALG-NQSG--KVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCD-DG----TVWRWD 381 (385)
T ss_pred CHHHHHHHHC-CCCC--CEEEEECCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEEC-CC----CEEEEE
T ss_conf 6788777530-6777--48999777799765753774256661001023036848999907-87----389887
No 198
>KOG1332 consensus
Probab=96.46 E-value=0.058 Score=30.22 Aligned_cols=251 Identities=17% Similarity=0.222 Sum_probs=125.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCC-EEEEEEECCCCCEEEEEECC--CCCEEEE
Q ss_conf 99999998999997504455554417887513676442100123114554-02688621764023455768--9984899
Q gi|254780548|r 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA-NIRYLTPSRDQILFEPRFSP--NQQKVAY 228 (447)
Q Consensus 152 R~~ah~~ad~i~~~ltG~~G~f~triafv~~~~~~~~~~~~l~i~d~DG~-n~~~l~~~~~~~~~sP~wSp--DG~~Iay 228 (447)
+.+.|-+.-++| ..|||=-+ ++.. -+|+-..-.|. ++-.-+.+....+.--+|.. =|.-||=
T Consensus 11 ~D~IHda~lDyy----------gkrlATcs----SD~t-VkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAS 75 (299)
T KOG1332 11 EDMIHDAQLDYY----------GKRLATCS----SDGT-VKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILAS 75 (299)
T ss_pred HHHHHHHHHHHH----------CCEEEEEC----CCCC-EEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCCCEEEE
T ss_conf 455657665331----------04356632----7871-89999748887355467427778705776416554737677
Q ss_pred EEECCCCCCCCCEEEECCCCCEEEE---ECCCCCEEEEEECCCCCE-EEEEECCCCCEEEEEEECCCCC-CCCCCCC-CC
Q ss_conf 8503467644303771179717997---437985244455158955-6774137873038998404774-1100257-76
Q gi|254780548|r 229 ATYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNA-TERLTNT-LF 302 (447)
Q Consensus 229 ~s~~~~~~~~i~~~~~~~g~~~~~~---~~~~~~~~~p~wSPDG~~-la~~~s~~g~~~I~~~d~~~~~-~~~lT~~-~~ 302 (447)
-||.++ +-+..-..| +-... +.+.+..-+.+|.|.+-- +++..+-||+..|..++.+++. ..++-+. .-
T Consensus 76 csYDgk----VIiWke~~g-~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~ 150 (299)
T KOG1332 76 CSYDGK----VIIWKEENG-RWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEI 150 (299)
T ss_pred EECCCE----EEEEECCCC-CHHHHHHHHHHCCCCCEECCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHCCCCC
T ss_conf 623872----999956898-456654334201530002035556642799960799678999747888542010103125
Q ss_pred CCCCEEEECC---CCEE---------EEEECCCCCC---CEEEEEECCCC-CCEEEEECCCCEEEEEECCCC----CEEE
Q ss_conf 4320255216---7478---------9972377653---31576402567-411122035300004687768----8899
Q gi|254780548|r 303 INISASYSPD---SSQI---------VFESDREGKE---QLYVMQSNGSD-QKRISQDKEASYFDPVWSPQG----DLIA 362 (447)
Q Consensus 303 ~d~~p~~spD---G~~I---------~f~Sdr~G~~---qiy~~~~~g~~-~~rlT~~~~~~~~~p~wSPdG----~~Ia 362 (447)
--.+.+|.|- |.-+ -|+| +|.- .||..+.+.=. .++|- +...-..+.+|.|.- ..||
T Consensus 151 GvnsVswapa~~~g~~~~~~~~~~~krlvS--gGcDn~VkiW~~~~~~w~~e~~l~-~H~dwVRDVAwaP~~gl~~s~iA 227 (299)
T KOG1332 151 GVNSVSWAPASAPGSLVDQGPAAKVKRLVS--GGCDNLVKIWKFDSDSWKLERTLE-GHKDWVRDVAWAPSVGLPKSTIA 227 (299)
T ss_pred CCCEEEECCCCCCCCCCCCCCCCCCCEEEC--CCCCCCEEEEECCCCCHHHHHHHH-HCCCHHHHHHCCCCCCCCCEEEE
T ss_conf 553356457678853224675421210011--787552566525785054444444-14213232020766798613678
Q ss_pred EEECCCCCEEEEEEECCCCCE--EEEECCCCC--CCCEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEE
Q ss_conf 997149915799998899967--996627875--54378878998999995089873379999889971473
Q gi|254780548|r 363 FTKFSGEKFAIGVMKKDGSQE--RLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430 (447)
Q Consensus 363 f~~~~~~~~~i~~~~~~g~~~--~~lt~~~~~--e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~~ 430 (447)
-.++++ .--||..+.++++. ++|.+ +.+ -..+||+-|..++- .+|.+.-.+|.-+++|+-++.
T Consensus 228 S~SqDg-~viIwt~~~e~e~wk~tll~~-f~~~~w~vSWS~sGn~LaV---s~GdNkvtlwke~~~Gkw~~v 294 (299)
T KOG1332 228 SCSQDG-TVIIWTKDEEYEPWKKTLLEE-FPDVVWRVSWSLSGNILAV---SGGDNKVTLWKENVDGKWEEV 294 (299)
T ss_pred EECCCC-CEEEEEECCCCCCCCCCCCCC-CCCCEEEEEEECCCCEEEE---ECCCCEEEEEEECCCCCEEEC
T ss_conf 753787-299998367567530200344-7862589887222657998---448867999876798737974
No 199
>KOG1408 consensus
Probab=96.45 E-value=0.031 Score=32.03 Aligned_cols=23 Identities=30% Similarity=0.580 Sum_probs=14.9
Q ss_pred EEEECCCCEEEEEECCCCCCCEEE
Q ss_conf 255216747899723776533157
Q gi|254780548|r 307 ASYSPDSSQIVFESDREGKEQLYV 330 (447)
Q Consensus 307 p~~spDG~~I~f~Sdr~G~~qiy~ 330 (447)
-..||||+.++ .-||.|+-.+|.
T Consensus 465 ~~vSp~gqhLA-sGDr~GnlrVy~ 487 (1080)
T KOG1408 465 LAVSPDGQHLA-SGDRGGNLRVYD 487 (1080)
T ss_pred EEECCCCCEEC-CCCCCCCEEEEE
T ss_conf 99778854001-567667358877
No 200
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=96.42 E-value=0.061 Score=30.06 Aligned_cols=167 Identities=14% Similarity=0.200 Sum_probs=70.2
Q ss_pred EEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEE-EEECCCCCEEEEEECCCCCEEEEEECCCCCEEE
Q ss_conf 8621764023455768998489985034676443037711797179-974379852444551589556774137873038
Q gi|254780548|r 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284 (447)
Q Consensus 206 l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~-~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I 284 (447)
...+....+..-+|+|+|..++ ++..... .+.+++...+.... .+..+.... ...|+|++..++ +...++...+
T Consensus 193 ~~~~~~~~v~~~~~~~~~~~~~-~~~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~d~~~~~ 267 (466)
T COG2319 193 TLAGHTDPVSSLAFSPDGGLLI-ASGSSDG--TIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLA-SGSSDGTIRL 267 (466)
T ss_pred EEECCCCCEEEEEECCCCCEEE-EEECCCC--EEEEECCCCCCEEEEEEECCCCCC-EEEECCCCCEEE-EEECCCCEEE
T ss_conf 7717899878999867898089-9745897--299642878838878870556772-589868998899-9828985999
Q ss_pred EEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEE-ECCC-CEEEEEECCCCCEEE
Q ss_conf 99840477411002577643202552167478997237765331576402567411122-0353-000046877688899
Q gi|254780548|r 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-DKEA-SYFDPVWSPQGDLIA 362 (447)
Q Consensus 285 ~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~-~~~~-~~~~p~wSPdG~~Ia 362 (447)
|-..........+..+...-....|+|++..++..+.. +...+| +..+........ .... ......|+|++..++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (466)
T COG2319 268 WDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSD-GTVRLW--DLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLV 344 (466)
T ss_pred EECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCC-CCEEEE--ECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEE
T ss_conf 97667870668860688508999987888869998699-857987--767786200112455567438999889888599
Q ss_pred EEECCCCCEEEEEEECCCCC
Q ss_conf 99714991579999889996
Q gi|254780548|r 363 FTKFSGEKFAIGVMKKDGSQ 382 (447)
Q Consensus 363 f~~~~~~~~~i~~~~~~g~~ 382 (447)
.....++...+ .+.....
T Consensus 345 ~~~~~d~~~~~--~~~~~~~ 362 (466)
T COG2319 345 SGGSDDGTIRL--WDLRTGK 362 (466)
T ss_pred EEECCCCEEEE--EECCCCC
T ss_conf 99748986999--9856664
No 201
>PRK11138 outer membrane protein assembly complex subunit YfgL; Provisional
Probab=96.41 E-value=0.062 Score=30.01 Aligned_cols=263 Identities=14% Similarity=0.175 Sum_probs=131.5
Q ss_pred EEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEECC-CCCEEEEE
Q ss_conf 99841555420000232337778899999998999997504455554417887513676442100123114-55402688
Q gi|254780548|r 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYL 206 (447)
Q Consensus 128 ~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~f~triafv~~~~~~~~~~~~l~i~d~-DG~n~~~l 206 (447)
+.-+|..+|++++...+.-....+ .+ ..-..|+|-.+.-..+ +||.... -+++..|. ||+-.-+.
T Consensus 81 V~a~d~~tG~~~W~~~l~~~~~~~---~~----~~~~~lsgGv~~~~~~-v~vgt~~------G~v~ALda~tG~~~W~~ 146 (394)
T PRK11138 81 VKALDADTGKEIWSVDLSEKDGLW---AS----NKSARLSGGVTAAGGK-VFIGSEK------GLVYALDAEDGEVAWQT 146 (394)
T ss_pred EEEEECCCCCEEEEEECCCCCCCC---CC----CCCCEEEEEEEECCCE-EEEECCC------CEEEEEECCCCCEEEEE
T ss_conf 999985479487687236544433---34----6675076623675989-9999799------88999987799553685
Q ss_pred EECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEE-CCCC----CEEEEEECCCCCEEEEEECCCCC
Q ss_conf 621764023455768998489985034676443037711797179974-3798----52444551589556774137873
Q gi|254780548|r 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRS----MILAPRFSSNGKRALISVQKDEA 281 (447)
Q Consensus 207 ~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~-~~~~----~~~~p~wSPDG~~la~~~s~~g~ 281 (447)
. -...+..+|... +.++...+. + .++|-+|..+|+..=... ..+. ...+|...- | .+++. ..+|
T Consensus 147 ~-~~~ev~s~P~v~--~g~V~V~t~---d-g~l~ald~~tG~~~W~~~~~~p~ltlrG~ssP~~~~-g-~v~~g-~~~G- 215 (394)
T PRK11138 147 K-VAGEALSRPVVS--DGVVVVHTS---N-GQLQALNEDDGAVKWTVNLDVPSLTLRGESAPATAF-G-GAFVG-TDNG- 215 (394)
T ss_pred E-CCCCEECCCEEC--CCEEEEEEC---C-CEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEC-C-EEEEE-CCCC-
T ss_conf 2-798127487323--999999937---9-959998734896887751677761013652327989-9-99997-5899-
Q ss_pred EEEEEEECCCCCCCC---CCCCC---------CCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCE
Q ss_conf 038998404774110---02577---------643202552167478997237765331576402567411122035300
Q gi|254780548|r 282 MDIYSVDLQSNATER---LTNTL---------FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349 (447)
Q Consensus 282 ~~I~~~d~~~~~~~~---lT~~~---------~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~ 349 (447)
.++.+++++|.... +.... .+|.+|... |..++.++ ..| +|+.+|+.+|+..- +.+. ..+
T Consensus 216 -~l~al~~~~G~~~We~~v~~~~G~telerl~Dvd~~Pvv~--~~~vy~~s-~~G--~l~Ald~~tG~~~W-~~~~-ss~ 287 (394)
T PRK11138 216 -RVAAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVV--GGVLYAVA-YNG--NLVALDLRSGQIVW-KREY-SSV 287 (394)
T ss_pred -EEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEE--CCEEEEEE-CCC--CEEEEEHHCCCEEE-EECC-CCC
T ss_conf -6999999899311202304676766322223443563786--89899983-588--38987731394734-3036-777
Q ss_pred EEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECC---CCCCCCEECCCCCEEEEEEEECCCCCEEEEEEEC-CC
Q ss_conf 0046877688899997149915799998899967996627---8755437887899899999508987337999988-99
Q gi|254780548|r 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NG 425 (447)
Q Consensus 350 ~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~---~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~-~G 425 (447)
..|. -+|+.|..+..++ +|+-+|..+|..+--.+. +..-.|... |.+|+.. ..+| .|+.+|. +|
T Consensus 288 ~~~~--v~~~~vyv~~~~~---~l~Ald~~tG~~~W~~~~l~~r~ls~P~~~--g~~v~vg-d~eG----~lh~ld~~tG 355 (394)
T PRK11138 288 NDFA--VDGNRIYLVDQND---RVYALDRRGGVELWSQSDLLHRLLTSPVLY--NGYLVVG-DSEG----YLHWINREDG 355 (394)
T ss_pred CCCE--EECCEEEEEECCC---CEEEEECCCCCEEEECCCCCCCCCCCCEEE--CCEEEEE-CCCC----EEEEEECCCC
T ss_conf 7825--8399899993698---189987589837826354455643388898--9999999-7998----8999998889
Q ss_pred CCEEECCCCC
Q ss_conf 7147336788
Q gi|254780548|r 426 RNETLINTPA 435 (447)
Q Consensus 426 ~~~~~~~~~g 435 (447)
+...+...++
T Consensus 356 ~~v~r~~~~~ 365 (394)
T PRK11138 356 RFVAQQKVDS 365 (394)
T ss_pred CEEEEEECCC
T ss_conf 8999998489
No 202
>KOG4283 consensus
Probab=96.38 E-value=0.064 Score=29.91 Aligned_cols=107 Identities=14% Similarity=0.157 Sum_probs=73.7
Q ss_pred CCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECC
Q ss_conf 64023455768998489985034676443037711797179974379852444551589556774137873038998404
Q gi|254780548|r 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290 (447)
Q Consensus 211 ~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~ 290 (447)
+..+++-+|||=..+-.-+.. .-+..+|-+-|+.+|.-...+..+.+...+..|||-..+++++.+-||...+|-+...
T Consensus 143 e~~VYshamSp~a~sHcLiA~-gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRra 221 (397)
T KOG4283 143 EGKVYSHAMSPMAMSHCLIAA-GTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRA 221 (397)
T ss_pred CCEEEHHHCCHHHHCCEEEEE-ECCCCCEEEEECCCCCCEEEECCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEEECC
T ss_conf 732121105701100268997-2488717887425774303512665866899842674069984577750788775203
Q ss_pred CCCCCCCCCCC--------------CCCCCEEEECCCCEEEE
Q ss_conf 77411002577--------------64320255216747899
Q gi|254780548|r 291 SNATERLTNTL--------------FINISASYSPDSSQIVF 318 (447)
Q Consensus 291 ~~~~~~lT~~~--------------~~d~~p~~spDG~~I~f 318 (447)
+|-.+-|-++. +--...+|+.||++++-
T Consensus 222 sgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~ 263 (397)
T KOG4283 222 SGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLAS 263 (397)
T ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHH
T ss_conf 551688534577258511256330232522575263155653
No 203
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.26 E-value=0.075 Score=29.47 Aligned_cols=76 Identities=12% Similarity=0.177 Sum_probs=48.2
Q ss_pred EEEEEECCCCCEEEEE-EECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCC-C-EEEEEEECC
Q ss_conf 2345576899848998-503467644303771179717997437985244455158955677413787-3-038998404
Q gi|254780548|r 214 LFEPRFSPNQQKVAYA-TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-A-MDIYSVDLQ 290 (447)
Q Consensus 214 ~~sP~wSpDG~~Iay~-s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g-~-~~I~~~d~~ 290 (447)
+..-+-|||++.+||. .+.+.....+.+.|+.+|... .....+...+..|.+||+.+.|+..... . ..+|...+.
T Consensus 131 Lg~~~~s~D~~~la~s~D~~G~e~y~lr~kdL~tg~~~--~d~i~~~~~~~~Wa~d~~tlfYt~~d~~~rp~kv~~h~~g 208 (682)
T COG1770 131 LGAASISPDHNLLAYSVDVLGDEQYTLRFKDLATGEEL--PDEITNTSGSFAWAADGKTLFYTRLDENHRPDKVWRHRLG 208 (682)
T ss_pred EEEEEECCCCCEEEEEEECCCCEEEEEEEEECCCCCCC--CHHHCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEEECC
T ss_conf 31156579886699998146751899999986655623--1222265552499578977999996788994048988448
Q ss_pred C
Q ss_conf 7
Q gi|254780548|r 291 S 291 (447)
Q Consensus 291 ~ 291 (447)
+
T Consensus 209 t 209 (682)
T COG1770 209 T 209 (682)
T ss_pred C
T ss_conf 8
No 204
>KOG1920 consensus
Probab=96.23 E-value=0.078 Score=29.36 Aligned_cols=99 Identities=16% Similarity=0.226 Sum_probs=43.0
Q ss_pred EEECCCCCEEEEEE--CCCCCEEEEEEECCCCCCCCCCCCC--CCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCC
Q ss_conf 45515895567741--3787303899840477411002577--6432025521674789972377653315764025674
Q gi|254780548|r 263 PRFSSNGKRALISV--QKDEAMDIYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338 (447)
Q Consensus 263 p~wSPDG~~la~~~--s~~g~~~I~~~d~~~~~~~~lT~~~--~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~ 338 (447)
-+|--||+..|++. +..|.-.|-++|.+ |.+. .|.-+ +...+-+|-|.|..|+-.-.+.....|-....+|-.-
T Consensus 201 IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~Ln-s~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~h 278 (1265)
T KOG1920 201 ISWRGDGEYFAVSFVESETGTRKIRVYDRE-GALN-STSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRH 278 (1265)
T ss_pred EEECCCCCEEEEEEEECCCCCEEEEEECCC-CHHH-CCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCEEEEECCCCCC
T ss_conf 898667738999988526886059996341-0232-24676345355334657787676523158877279992487303
Q ss_pred C--EEEEECCCC-EEEEEECCCCCEEEE
Q ss_conf 1--112203530-000468776888999
Q gi|254780548|r 339 K--RISQDKEAS-YFDPVWSPQGDLIAF 363 (447)
Q Consensus 339 ~--rlT~~~~~~-~~~p~wSPdG~~Iaf 363 (447)
. .|-+..+.. ...-.|.-+++-+|.
T Consensus 279 g~f~l~~p~de~~ve~L~Wns~sdiLAv 306 (1265)
T KOG1920 279 GEFVLPFPLDEKEVEELAWNSNSDILAV 306 (1265)
T ss_pred CCCCCCCCCCCCCHHEEEECCCCCCEEE
T ss_conf 6414688554412011465477771001
No 205
>KOG0295 consensus
Probab=96.20 E-value=0.08 Score=29.26 Aligned_cols=175 Identities=10% Similarity=0.100 Sum_probs=85.4
Q ss_pred EEECCCCC-EEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEE
Q ss_conf 23114554-02688621764023455768998489985034676443037711797179974379852444551589556
Q gi|254780548|r 194 CVMDRDGA-NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272 (447)
Q Consensus 194 ~i~d~DG~-n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~l 272 (447)
.+-|.|.. .......+.+-++.++.+=|-|..|+=-++ .+ .|...+..+|-.......++...-..+-+-||.-+
T Consensus 175 ~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~sr--D~--tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~ 250 (406)
T KOG0295 175 KLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSR--DN--TIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTII 250 (406)
T ss_pred HHEEHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEECCC--CC--CEEEEECCCCEEEEECCCCHHHEEEEEECCCEEEE
T ss_conf 310378899999874186642356899865876520255--45--25677504653677506855738999965880599
Q ss_pred EEEECCCCCEEEEEEECCCCCCCCC-CCCCCCCCCEEEECC--------------CCEEEEEECCCCCCCEEEEEECCCC
Q ss_conf 7741378730389984047741100-257764320255216--------------7478997237765331576402567
Q gi|254780548|r 273 LISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPD--------------SSQIVFESDREGKEQLYVMQSNGSD 337 (447)
Q Consensus 273 a~~~s~~g~~~I~~~d~~~~~~~~l-T~~~~~d~~p~~spD--------------G~~I~f~Sdr~G~~qiy~~~~~g~~ 337 (447)
| +.+.+....+|.. ++++.+.+ +.+.-.----+|.|+ |-++.+.-.|.+. |-..|+.++.
T Consensus 251 A-s~s~dqtl~vW~~--~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDkt--Ik~wdv~tg~ 325 (406)
T KOG0295 251 A-SCSNDQTLRVWVV--ATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKT--IKIWDVSTGM 325 (406)
T ss_pred E-ECCCCCEEEEEEE--CCCHHHHHHHCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCEEEEECCCCE--EEEEECCCCE
T ss_conf 8-4379852999971--463366652024341478986140137523431678888617886046654--8999635771
Q ss_pred CCEEEEECCCC-EEEEEECCCCCEEEEEECCCCCEEEEEEECCCC
Q ss_conf 41112203530-000468776888999971499157999988999
Q gi|254780548|r 338 QKRISQDKEAS-YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381 (447)
Q Consensus 338 ~~rlT~~~~~~-~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~ 381 (447)
. .+|..+..| ..+.+++|.|++|+-+ .+++..++ +|+..+
T Consensus 326 c-L~tL~ghdnwVr~~af~p~Gkyi~Sc-aDDktlrv--wdl~~~ 366 (406)
T KOG0295 326 C-LFTLVGHDNWVRGVAFSPGGKYILSC-ADDKTLRV--WDLKNL 366 (406)
T ss_pred E-EEEEECCCCEEEEEEECCCCEEEEEE-ECCCCEEE--EEECCC
T ss_conf 8-99995165503314776898189997-06981799--970454
No 206
>KOG0289 consensus
Probab=96.03 E-value=0.096 Score=28.73 Aligned_cols=115 Identities=15% Similarity=0.196 Sum_probs=49.0
Q ss_pred EEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCC---CCCCEEEECCCCEEEEEECCCCCCCEEEEEECC-C
Q ss_conf 444551589556774137873038998404774110025776---432025521674789972377653315764025-6
Q gi|254780548|r 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF---INISASYSPDSSQIVFESDREGKEQLYVMQSNG-S 336 (447)
Q Consensus 261 ~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~---~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g-~ 336 (447)
.+..|+|||- |+-+.+.||.-+|| |+..+. .+++.++ .-.+-+||-+|=+++-.+|.+- +...|+.- .
T Consensus 351 ts~~fHpDgL-ifgtgt~d~~vkiw--dlks~~--~~a~Fpght~~vk~i~FsENGY~Lat~add~~---V~lwDLRKl~ 422 (506)
T KOG0289 351 TSAAFHPDGL-IFGTGTPDGVVKIW--DLKSQT--NVAKFPGHTGPVKAISFSENGYWLATAADDGS---VKLWDLRKLK 422 (506)
T ss_pred EEEEECCCCE-EEECCCCCCEEEEE--ECCCCC--CCCCCCCCCCCEEEEEECCCCEEEEEEECCCE---EEEEEEHHHC
T ss_conf 7766757852-78505777358998--737844--10138987775258886368369999856872---8998701102
Q ss_pred CCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEE
Q ss_conf 74111220353000046877688899997149915799998899967996
Q gi|254780548|r 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386 (447)
Q Consensus 337 ~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~l 386 (447)
+.+.++.+..+...+..+-+-|+.++-. +...+||.++-.+...+.+
T Consensus 423 n~kt~~l~~~~~v~s~~fD~SGt~L~~~---g~~l~Vy~~~k~~k~W~~~ 469 (506)
T KOG0289 423 NFKTIQLDEKKEVNSLSFDQSGTYLGIA---GSDLQVYICKKKTKSWTEI 469 (506)
T ss_pred CCCEEECCCCCCCEEEEECCCCCEEEEE---CCEEEEEEEECCCCCCEEE
T ss_conf 6540555666642058875877747760---4616999993156650000
No 207
>KOG4283 consensus
Probab=95.96 E-value=0.1 Score=28.54 Aligned_cols=89 Identities=15% Similarity=0.181 Sum_probs=37.9
Q ss_pred CCEEEECCCCCEEEEECCCCCEEEEEECCCCC-EEEEEECCCCCEEEEEEECCCCCCC-CCCCCCCCCCCEEEECCCCEE
Q ss_conf 30377117971799743798524445515895-5677413787303899840477411-002577643202552167478
Q gi|254780548|r 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK-RALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQI 316 (447)
Q Consensus 239 i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~-~la~~~s~~g~~~I~~~d~~~~~~~-~lT~~~~~d~~p~~spDG~~I 316 (447)
+.+.|..|-+. .....+++...+-+|||=.. +-+++. ....+++-+-|+++|.-. -|..+...-.+..|||..+++
T Consensus 126 lKVWDtnTlQ~-a~~F~me~~VYshamSp~a~sHcLiA~-gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~v 203 (397)
T KOG4283 126 LKVWDTNTLQE-AVDFKMEGKVYSHAMSPMAMSHCLIAA-GTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWV 203 (397)
T ss_pred EEEEECCCCEE-EEEEECCCEEEHHHCCHHHHCCEEEEE-ECCCCCEEEEECCCCCCEEEECCCCCCEEEEEECCCCEEE
T ss_conf 88863475147-898623732121105701100268997-2488717887425774303512665866899842674069
Q ss_pred EEEECCCCCCCEE
Q ss_conf 9972377653315
Q gi|254780548|r 317 VFESDREGKEQLY 329 (447)
Q Consensus 317 ~f~Sdr~G~~qiy 329 (447)
.++..-.|.-.+|
T Consensus 204 LatgsaDg~irlW 216 (397)
T KOG4283 204 LATGSADGAIRLW 216 (397)
T ss_pred EEECCCCCCEEEE
T ss_conf 9845777507887
No 208
>KOG2100 consensus
Probab=95.95 E-value=0.1 Score=28.50 Aligned_cols=77 Identities=19% Similarity=0.294 Sum_probs=50.1
Q ss_pred EEEECCCCCEEEEE-ECCCC-CEEEEEEECCCC-CEEEEECCCCC--CCCEECCCCCEEEEEEEECCCCCEEEEEEECCC
Q ss_conf 04687768889999-71499-157999988999-67996627875--543788789989999950898733799998899
Q gi|254780548|r 351 DPVWSPQGDLIAFT-KFSGE-KFAIGVMKKDGS-QERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425 (447)
Q Consensus 351 ~p~wSPdG~~Iaf~-~~~~~-~~~i~~~~~~g~-~~~~lt~~~~~--e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G 425 (447)
.|.++.|+....+. +...+ .-+|......++ ..+.||.+... .-+-|+.|.+.|.|.....+....+||.+++..
T Consensus 344 ~~~~~~d~~~~~~~~~~~~~~~~hi~~~~~~~~~~~~~lt~g~w~v~~i~~~~~~~~~i~f~~~~~~~~~~~ly~i~~~~ 423 (755)
T KOG2100 344 EPVFSSDGSSYLKVDSVSDGGYNHIAYLKLSNGSEPRMLTSGNWEVTSILGYDKDSNRIYFDAYEEDPSERHLYSISLGS 423 (755)
T ss_pred CEEEEECCCEEEEEEECCCCCEEEEEEEECCCCCCEEECCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEECCC
T ss_conf 40565527716899842568601469986489875300144574798712226877569897036678742379996465
Q ss_pred CC
Q ss_conf 71
Q gi|254780548|r 426 RN 427 (447)
Q Consensus 426 ~~ 427 (447)
..
T Consensus 424 ~~ 425 (755)
T KOG2100 424 GT 425 (755)
T ss_pred CC
T ss_conf 75
No 209
>KOG1214 consensus
Probab=95.71 E-value=0.13 Score=27.85 Aligned_cols=58 Identities=21% Similarity=0.329 Sum_probs=37.7
Q ss_pred EEEEEECCCCCEEEEECCCCC--CCCEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEEEC
Q ss_conf 799998899967996627875--543788789989999950898733799998899714733
Q gi|254780548|r 372 AIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431 (447)
Q Consensus 372 ~i~~~~~~g~~~~~lt~~~~~--e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~~~ 431 (447)
.|-+..++|++.+.|-...+. .+-..-|=++.++|+-+.. .+++|-..+.||++.|.+
T Consensus 1091 ~IevA~LdG~~rkvLf~tdLVNPR~iv~D~~rgnLYwtDWnR--enPkIets~mDG~NrRil 1150 (1289)
T KOG1214 1091 KIEVALLDGSERKVLFYTDLVNPRAIVVDPIRGNLYWTDWNR--ENPKIETSSMDGENRRIL 1150 (1289)
T ss_pred CEEEEECCCCEEEEEEEECCCCCCEEEEECCCCCEEECCCCC--CCCCCEEECCCCCCCEEE
T ss_conf 000331177413678761466765078641468145302345--588420100378652588
No 210
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.69 E-value=0.13 Score=27.81 Aligned_cols=251 Identities=17% Similarity=0.144 Sum_probs=118.7
Q ss_pred HHCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC
Q ss_conf 41562189999974046622578999841555420000232337778899999998999997504455554417887513
Q gi|254780548|r 104 NSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183 (447)
Q Consensus 104 ~~~gad~lv~G~i~~~~~~~~~v~~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~f~triafv~~~ 183 (447)
+.+.+|.++.+-... .++++-+-. --..||.+...... .-+|-++ . -+..-|-+++.++
T Consensus 30 s~~~~qavfasaf~~-~dgs~g~a~---~~eaGk~v~~~~lp-------aR~Hgi~----~------~p~~~ravafARr 88 (366)
T COG3490 30 SLLRAQAVFASAFDA-RDGSFGAAT---LSEAGKIVFATALP-------ARGHGIA----F------HPALPRAVAFARR 88 (366)
T ss_pred HHHCCCCHHEEEEEC-CCCCEEEEE---ECCCCCEEEEEECC-------CCCCCEE----C------CCCCCCEEEEEEC
T ss_conf 540675330000204-688443788---72577166533041-------0037702----1------7887513799716
Q ss_pred CCCCCCCEEEEEECCCCCEEEEEEECCCC--CEEEEEECCCCCEEEEEEECCCC--CCCCCEEEECCCCCEEEEECCCCC
Q ss_conf 67644210012311455402688621764--02345576899848998503467--644303771179717997437985
Q gi|254780548|r 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQ--ILFEPRFSPNQQKVAYATYDDED--ILRVYLMDTRIDRAPKRIGNFRSM 259 (447)
Q Consensus 184 ~~~~~~~~~l~i~d~DG~n~~~l~~~~~~--~~~sP~wSpDG~~Iay~s~~~~~--~~~i~~~~~~~g~~~~~~~~~~~~ 259 (447)
-++ .-++.|.+|...-++..+.+. ....-.|||||..+ |.+-.+-+ ..-|=+||.+. .-+.+..++..
T Consensus 89 PGt-----f~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~L-YATEndfd~~rGViGvYd~r~--~fqrvgE~~t~ 160 (366)
T COG3490 89 PGT-----FAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLL-YATENDFDPNRGVIGVYDARE--GFQRVGEFSTH 160 (366)
T ss_pred CCC-----EEEEECCCCCCCCEEEECCCCCEEECCCCCCCCCCEE-EEECCCCCCCCCEEEEEECCC--CCCEECCCCCC
T ss_conf 872-----6999877777576787446676351242117987579-952278777874489985200--00021233467
Q ss_pred EEEE---EECCCCCEEEEEEC------CCC---------CEEEEEEECCCCCC-CCCCCC-----CCCCCCEEEECCCCE
Q ss_conf 2444---55158955677413------787---------30389984047741-100257-----764320255216747
Q gi|254780548|r 260 ILAP---RFSSNGKRALISVQ------KDE---------AMDIYSVDLQSNAT-ERLTNT-----LFINISASYSPDSSQ 315 (447)
Q Consensus 260 ~~~p---~wSPDG~~la~~~s------~~g---------~~~I~~~d~~~~~~-~~lT~~-----~~~d~~p~~spDG~~ 315 (447)
-..| .|.+||+.++.+-. ..| ++-+..+|..+|++ ++.|-- .++ ..-.--+||.
T Consensus 161 GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSi-RHld~g~dgt- 238 (366)
T COG3490 161 GIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSI-RHLDIGRDGT- 238 (366)
T ss_pred CCCCCEEEEECCCCEEEEECCCEECCCCCCCCCCCHHHCCCCEEEEECCCCCHHHHCCCCHHHHHCCE-EEEEECCCCC-
T ss_conf 76821158835986899957864405555754234322585179984125541221137655532024-4454379983-
Q ss_pred EEEEE----CCCCCCCEEEEEECCCCCCEEEE-----ECCCCE-EEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEE
Q ss_conf 89972----37765331576402567411122-----035300-004687768889999714991579999889996799
Q gi|254780548|r 316 IVFES----DREGKEQLYVMQSNGSDQKRISQ-----DKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385 (447)
Q Consensus 316 I~f~S----dr~G~~qiy~~~~~g~~~~rlT~-----~~~~~~-~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~ 385 (447)
|.|-. +|...|-+--+-..|+..+-+-- ..-.+| .+.+-.-+..+++.++-.++.+ .++|.+++....
T Consensus 239 vwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~--vi~da~tG~vv~ 316 (366)
T COG3490 239 VWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRA--VIWDAATGAVVS 316 (366)
T ss_pred EEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCEEEEECCCCCEE--EEEECCCCCEEE
T ss_conf 898777107876687400121589867225798899999986654415535577378745998768--999767784774
Q ss_pred EE
Q ss_conf 66
Q gi|254780548|r 386 LV 387 (447)
Q Consensus 386 lt 387 (447)
..
T Consensus 317 ~a 318 (366)
T COG3490 317 EA 318 (366)
T ss_pred CC
T ss_conf 14
No 211
>KOG0268 consensus
Probab=95.64 E-value=0.14 Score=27.69 Aligned_cols=171 Identities=15% Similarity=0.186 Sum_probs=94.6
Q ss_pred EEECCCCCEEE-EEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEE
Q ss_conf 23114554026-88621764023455768998489985034676443037711797179974379852444551589556
Q gi|254780548|r 194 CVMDRDGANIR-YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272 (447)
Q Consensus 194 ~i~d~DG~n~~-~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~l 272 (447)
-|-|.--.+|. ++.-+.+.| .+-.++|--..|.-... ....|.++|++++...+.+.-.-..| +-+|+|.+ .
T Consensus 170 ~IWD~~R~~Pv~smswG~Dti-~svkfNpvETsILas~~---sDrsIvLyD~R~~~Pl~KVi~~mRTN-~IswnPea--f 242 (433)
T KOG0268 170 DIWDEQRDNPVSSMSWGADSI-SSVKFNPVETSILASCA---SDRSIVLYDLRQASPLKKVILTMRTN-TICWNPEA--F 242 (433)
T ss_pred EECCCCCCCCCCEEECCCCCE-EEEECCCCCCCEEEEEC---CCCCEEEEECCCCCCCCEEEEECCCC-CEECCCCC--C
T ss_conf 550413478412014278833-57860787630024303---67846888612477322135512236-30027532--2
Q ss_pred EEEECCCCCEEEEEEECCCCCCCCCC---CCCCCCCCEEEECCCCEEEEEE-CCCCCCCEEEEEECCCCCCEEEEE-CCC
Q ss_conf 77413787303899840477411002---5776432025521674789972-377653315764025674111220-353
Q gi|254780548|r 273 LISVQKDEAMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQD-KEA 347 (447)
Q Consensus 273 a~~~s~~g~~~I~~~d~~~~~~~~lT---~~~~~d~~p~~spDG~~I~f~S-dr~G~~qiy~~~~~g~~~~rlT~~-~~~ 347 (447)
.|+.. +...+||.+|...- .+.|- ++-+...+..|||-|+.++-.| |++ |-+.+++.+..|-+-.. .-.
T Consensus 243 nF~~a-~ED~nlY~~DmR~l-~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDks----IRIf~~~~~~SRdiYhtkRMq 316 (433)
T KOG0268 243 NFVAA-NEDHNLYTYDMRNL-SRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKS----IRIFPVNHGHSRDIYHTKRMQ 316 (433)
T ss_pred CEEEC-CCCCCCEEHHHHHH-CCCCHHHCCCCEEEEEECCCCCCCHHCCCCCCCE----EEEEECCCCCCHHHHHHHHHH
T ss_conf 02212-56542000203542-2530110265405897321787730001334650----798625888533356676533
Q ss_pred CEEEEEECCCCCEEEEEECCCCCEEEEEEEC
Q ss_conf 0000468776888999971499157999988
Q gi|254780548|r 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378 (447)
Q Consensus 348 ~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~ 378 (447)
+.....||-|.++| ++..++++..+|.-+.
T Consensus 317 ~V~~Vk~S~Dskyi-~SGSdd~nvRlWka~A 346 (433)
T KOG0268 317 HVFCVKYSMDSKYI-ISGSDDGNVRLWKAKA 346 (433)
T ss_pred EEEEEEEECCCCEE-EECCCCCCEEEEECCH
T ss_conf 12479871465279-9668876333221000
No 212
>PRK11138 outer membrane protein assembly complex subunit YfgL; Provisional
Probab=95.54 E-value=0.15 Score=27.45 Aligned_cols=258 Identities=16% Similarity=0.186 Sum_probs=122.2
Q ss_pred EEEEEEEEECCCCEEE-----EEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECC
Q ss_conf 8999997404662257-----89998415554200002323377788999999989999975044555544178875136
Q gi|254780548|r 110 VLVTGRVIKEGKDRLR-----VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184 (447)
Q Consensus 110 ~lv~G~i~~~~~~~~~-----v~~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~f~triafv~~~~ 184 (447)
..+.|.+...++ ++- -++.-+|..+|++++..+..+.. ..-+-+.+. ++||....
T Consensus 110 ~~lsgGv~~~~~-~v~vgt~~G~v~ALda~tG~~~W~~~~~~ev------------------~s~P~v~~g-~V~V~t~d 169 (394)
T PRK11138 110 ARLSGGVTAAGG-KVFIGSEKGLVYALDAEDGEVAWQTKVAGEA------------------LSRPVVSDG-VVVVHTSN 169 (394)
T ss_pred CEEEEEEEECCC-EEEEECCCCEEEEEECCCCCEEEEEECCCCE------------------ECCCEECCC-EEEEEECC
T ss_conf 507662367598-9999979988999987799553685279812------------------748732399-99999379
Q ss_pred CCCCCCEEEEEECC-CCCEEEEEEECCCCC----EEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCE--EEEE---
Q ss_conf 76442100123114-554026886217640----2345576899848998503467644303771179717--9974---
Q gi|254780548|r 185 VSGIIKNSLCVMDR-DGANIRYLTPSRDQI----LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP--KRIG--- 254 (447)
Q Consensus 185 ~~~~~~~~l~i~d~-DG~n~~~l~~~~~~~----~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~--~~~~--- 254 (447)
+ +|+..|. ||+-.-+........ ..+|....+ .+|+.+.++ +++.++..+|... ..++
T Consensus 170 g------~l~ald~~tG~~~W~~~~~~p~ltlrG~ssP~~~~g---~v~~g~~~G---~l~al~~~~G~~~We~~v~~~~ 237 (394)
T PRK11138 170 G------QLQALNEDDGAVKWTVNLDVPSLTLRGESAPATAFG---GAFVGTDNG---RVAAVLMEQGQLIWQQRISQPT 237 (394)
T ss_pred C------EEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEECC---EEEEECCCC---EEEEEECCCCCHHHHHHHCCCC
T ss_conf 9------599987348968877516777610136523279899---999975899---6999999899311202304676
Q ss_pred ------CCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCE
Q ss_conf ------37985244455158955677413787303899840477411002577643202552167478997237765331
Q gi|254780548|r 255 ------NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328 (447)
Q Consensus 255 ------~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qi 328 (447)
..-....+|... |..+ |+.+.+| .|+.+|+.+|+...=.+..+. ..| .-+|..|+.+++ .| +|
T Consensus 238 G~telerl~Dvd~~Pvv~--~~~v-y~~s~~G--~l~Ald~~tG~~~W~~~~ss~-~~~--~v~~~~vyv~~~-~~--~l 306 (394)
T PRK11138 238 GATEIDRLVDVDTTPVVV--GGVL-YAVAYNG--NLVALDLRSGQIVWKREYSSV-NDF--AVDGNRIYLVDQ-ND--RV 306 (394)
T ss_pred CCCCCCCCCCCCCCCEEE--CCEE-EEEECCC--CEEEEEHHCCCEEEEECCCCC-CCC--EEECCEEEEEEC-CC--CE
T ss_conf 766322223443563786--8989-9983588--389877313947343036777-782--583998999936-98--18
Q ss_pred EEEEECCCCCCEEEEE-CCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEE-EE-ECC-CCCCCCEECCCCCEE
Q ss_conf 5764025674111220-3530000468776888999971499157999988999679-96-627-875543788789989
Q gi|254780548|r 329 YVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LL-VED-SNLQAPTWSPSGRSL 404 (447)
Q Consensus 329 y~~~~~g~~~~rlT~~-~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~-~l-t~~-~~~e~P~wSPDG~~i 404 (447)
|.++..+|+..--... .......|... |+.|++...++ .|+.+|+++|+.. ++ ..+ +.--.|... +++ +
T Consensus 307 ~Ald~~tG~~~W~~~~l~~r~ls~P~~~--g~~v~vgd~eG---~lh~ld~~tG~~v~r~~~~~~~i~~~Pvv~-~~~-l 379 (394)
T PRK11138 307 YALDRRGGVELWSQSDLLHRLLTSPVLY--NGYLVVGDSEG---YLHWINREDGRFVAQQKVDSSGFYSEPVVA-DDK-L 379 (394)
T ss_pred EEEECCCCCEEEECCCCCCCCCCCCEEE--CCEEEEECCCC---EEEEEECCCCCEEEEEECCCCCEEECCEEE-CCE-E
T ss_conf 9987589837826354455643388898--99999997998---899999888989999984898504488998-999-9
Q ss_pred EEEEEECCCCCEEEEEEE
Q ss_conf 999950898733799998
Q gi|254780548|r 405 IFSRKKDGDTGSKLYSID 422 (447)
Q Consensus 405 ~f~~~~~g~~~~~l~~~~ 422 (447)
|.-+++| .||.++
T Consensus 380 -yv~t~~G----~l~A~~ 392 (394)
T PRK11138 380 -LIQARDG----KVYAIT 392 (394)
T ss_pred -EEEECCC----EEEEEE
T ss_conf -9994995----899993
No 213
>KOG4378 consensus
Probab=95.52 E-value=0.15 Score=27.40 Aligned_cols=11 Identities=9% Similarity=0.165 Sum_probs=4.9
Q ss_pred EEECCCCEEEE
Q ss_conf 55216747899
Q gi|254780548|r 308 SYSPDSSQIVF 318 (447)
Q Consensus 308 ~~spDG~~I~f 318 (447)
.|+|+|-.++-
T Consensus 257 af~~~G~~L~a 267 (673)
T KOG4378 257 AFSECGTYLCA 267 (673)
T ss_pred EECCCCEEEEE
T ss_conf 53488418984
No 214
>KOG0319 consensus
Probab=95.50 E-value=0.16 Score=27.35 Aligned_cols=63 Identities=19% Similarity=0.263 Sum_probs=25.2
Q ss_pred EECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEE-ECCCCCEEEEEECCCCCEEEEEE
Q ss_conf 57689984899850346764430377117971799743798524445-51589556774137873038998
Q gi|254780548|r 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALISVQKDEAMDIYSV 287 (447)
Q Consensus 218 ~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~-wSPDG~~la~~~s~~g~~~I~~~ 287 (447)
.|-|+-+.+|..+ +.+++-++++.+- ...++..+.....+-. |+ +| .++.+.++|...-+|.+
T Consensus 331 ~lG~e~~~laVAT----Ns~~lr~y~~~~~-~c~ii~GH~e~vlSL~~~~-~g-~llat~sKD~svilWr~ 394 (775)
T KOG0319 331 FLGPEESHLAVAT----NSPELRLYTLPTS-YCQIIPGHTEAVLSLDVWS-SG-DLLATGSKDKSVILWRL 394 (775)
T ss_pred ECCCCCCEEEEEE----CCCCEEEEECCCC-CEEEEECCHHHEEEEEECC-CC-CEEEEECCCCEEEEEEE
T ss_conf 1177545599970----7971698964997-5378707545504543213-67-38998358866999994
No 215
>TIGR02722 lp_ uncharacterized lipoprotein; InterPro: IPR014094 Members of this protein family are restricted to the Proteobacteria, and all are predicted lipoproteins. In genomes that contain the thiK gene for the salvage enzyme thiamin kinase, the member of this family is encoded nearby..
Probab=95.47 E-value=0.024 Score=32.73 Aligned_cols=78 Identities=15% Similarity=0.262 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHC--CCCEEECCHH----HCCC------CCCCCCCCCC----HHHHHHCCCCEEEEEEEEECCCCE---
Q ss_conf 7899999986201--7514550865----5034------6676111457----788741562189999974046622---
Q gi|254780548|r 63 GKVSEVVSKDLQR--SDVFNLISQD----SFKQ------KITNPDSIPR----FQDWNSLGAQVLVTGRVIKEGKDR--- 123 (447)
Q Consensus 63 ~~i~~ii~~DL~~--SG~F~~i~~~----~~~~------~~~~~~~~~~----f~~W~~~gad~lv~G~i~~~~~~~--- 123 (447)
+++.+-|+.-|.. +|.|++++.. .... ...+ ++..+ ..-=+.+||+|++.|++....+ +
T Consensus 106 ~~lt~~i~~~L~~rs~G~F~l~~~~g~~g~~~~~~~~l~~~~~-~~~~~~~Ta~~~G~~~gA~y~LyG~~~~~~~-~nv~ 183 (215)
T TIGR02722 106 ESLTDKIRTALLKRSSGKFVLTDAQGASGALDRVREQLGLQRE-SGLVNQSTAIKKGRLVGADYSLYGKISSIVK-KNVD 183 (215)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHCCCCEEEEEHHHHHHH-HCCC
T ss_conf 9999999999998438947995064432068899998732320-6775867876542101420368610121223-2036
Q ss_pred -------EEEEEEEECCCCCCEECCC
Q ss_conf -------5789998415554200002
Q gi|254780548|r 124 -------LRVEFRLWDVKDRKQIIGK 142 (447)
Q Consensus 124 -------~~v~~~L~dv~~~~~i~~~ 142 (447)
|.+.++|-|+.+|..++..
T Consensus 184 g~~~~v~y~~~l~Lmd~~TGli~W~d 209 (215)
T TIGR02722 184 GSKKLVYYKFTLRLMDLKTGLIVWSD 209 (215)
T ss_pred CCCEEEEHEEEEEECCCCCCCEEECC
T ss_conf 87314412113543135465268658
No 216
>KOG0647 consensus
Probab=95.43 E-value=0.16 Score=27.21 Aligned_cols=71 Identities=10% Similarity=0.112 Sum_probs=34.9
Q ss_pred EEEEECCCCCE-EEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCC
Q ss_conf 01231145540-268862176402345576899848998503467644303771179717997437985244455158
Q gi|254780548|r 192 SLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268 (447)
Q Consensus 192 ~l~i~d~DG~n-~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPD 268 (447)
++|-...+|.- ++.... .+..++.-+||-||.++ |+.-. ..++-++||.+++. ..+..+.+..-+-.|=+.
T Consensus 53 R~wevq~~g~~~~ka~~~-~~~PvL~v~WsddgskV-f~g~~---Dk~~k~wDL~S~Q~-~~v~~Hd~pvkt~~wv~~ 124 (347)
T KOG0647 53 RIWEVQNSGQLVPKAQQS-HDGPVLDVCWSDDGSKV-FSGGC---DKQAKLWDLASGQV-SQVAAHDAPVKTCHWVPG 124 (347)
T ss_pred EEEEEECCCCCCCHHHHC-CCCCEEEEEECCCCCEE-EEECC---CCCEEEEECCCCCE-EEEEECCCCEEEEEEECC
T ss_conf 999972478426456631-69982788881688549-86216---87367877157970-566513665107998668
No 217
>KOG1332 consensus
Probab=95.41 E-value=0.12 Score=28.15 Aligned_cols=165 Identities=18% Similarity=0.201 Sum_probs=76.5
Q ss_pred EEEEEECCCCCE--EEEEEECCCCCCCCCEEEECCCCCE-EEEECCCCCEEEEEECCC---C-----------CEEEEEE
Q ss_conf 234557689984--8998503467644303771179717-997437985244455158---9-----------5567741
Q gi|254780548|r 214 LFEPRFSPNQQK--VAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSN---G-----------KRALISV 276 (447)
Q Consensus 214 ~~sP~wSpDG~~--Iay~s~~~~~~~~i~~~~~~~g~~~-~~~~~~~~~~~~p~wSPD---G-----------~~la~~~ 276 (447)
+.+-+|.|.+-- +|..| .++ ...|.-++...+-.. +....++-...+.+|.|- | ++++ +.
T Consensus 105 VNsV~wapheygl~Lacas-SDG-~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlv-Sg 181 (299)
T KOG1332 105 VNSVAWAPHEYGLLLACAS-SDG-KVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLV-SG 181 (299)
T ss_pred CCEECCCCCCCCEEEEEEE-CCC-CEEEEEECCCCCCCCHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEE-CC
T ss_conf 0002035556642799960-799-67899974788854201010312555335645767885322467542121001-17
Q ss_pred CCCCCEEEEEEECCCCCC-CCCCCCCCCCCCEEEECCC----CEEEEEECCCCCCCEEEEEECCCCC--CEEEEECCCCE
Q ss_conf 378730389984047741-1002577643202552167----4789972377653315764025674--11122035300
Q gi|254780548|r 277 QKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDS----SQIVFESDREGKEQLYVMQSNGSDQ--KRISQDKEASY 349 (447)
Q Consensus 277 s~~g~~~I~~~d~~~~~~-~~lT~~~~~d~~p~~spDG----~~I~f~Sdr~G~~qiy~~~~~g~~~--~rlT~~~~~~~ 349 (447)
.-|..-.||..+-+.=.+ +.|..+.......+|.|.- ..|+-.| ..|+--||..+.+++.- +.|. ....-.
T Consensus 182 GcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~S-qDg~viIwt~~~e~e~wk~tll~-~f~~~~ 259 (299)
T KOG1332 182 GCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCS-QDGTVIIWTKDEEYEPWKKTLLE-EFPDVV 259 (299)
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEEEEC-CCCCEEEEEECCCCCCCCCCCCC-CCCCCE
T ss_conf 8755256652578505444444414213232020766798613678753-78729999836756753020034-478625
Q ss_pred EEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEE
Q ss_conf 00468776888999971499157999988999679
Q gi|254780548|r 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384 (447)
Q Consensus 350 ~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~ 384 (447)
....||+-|..++.+ ..+.++.++.-+.+|.=++
T Consensus 260 w~vSWS~sGn~LaVs-~GdNkvtlwke~~~Gkw~~ 293 (299)
T KOG1332 260 WRVSWSLSGNILAVS-GGDNKVTLWKENVDGKWEE 293 (299)
T ss_pred EEEEEECCCCEEEEE-CCCCEEEEEEECCCCCEEE
T ss_conf 898872226579984-4886799987679873797
No 218
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.40 E-value=0.17 Score=27.13 Aligned_cols=187 Identities=15% Similarity=0.137 Sum_probs=90.2
Q ss_pred CEEEEEECCCCCEEEEE-EECC-CCCEEEEEECCCCCE-EEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEE--EEE
Q ss_conf 10012311455402688-6217-640234557689984-899850346764430377117971799743798524--445
Q gi|254780548|r 190 KNSLCVMDRDGANIRYL-TPSR-DQILFEPRFSPNQQK-VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL--APR 264 (447)
Q Consensus 190 ~~~l~i~d~DG~n~~~l-~~~~-~~~~~sP~wSpDG~~-Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~--~p~ 264 (447)
.+-+.+.+-+|.-...+ +..+ -.+ .++|--.+ ++|.. ......+++|..+.+.+..+.+.++-.+ -..
T Consensus 48 s~g~a~~~eaGk~v~~~~lpaR~Hgi----~~~p~~~ravafAR---rPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGv 120 (366)
T COG3490 48 SFGAATLSEAGKIVFATALPARGHGI----AFHPALPRAVAFAR---RPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGV 120 (366)
T ss_pred CEEEEEECCCCCEEEEEECCCCCCCE----ECCCCCCCEEEEEE---CCCCEEEEECCCCCCCCEEEECCCCCEEECCCC
T ss_conf 44378872577166533041003770----21788751379971---687269998777775767874466763512421
Q ss_pred ECCCCCEEEEEECCCCC---EEEEEEECCCCCCCCCCCCCCCC---CCEEEECCCCEEEEEEC------CCCC-------
Q ss_conf 51589556774137873---03899840477411002577643---20255216747899723------7765-------
Q gi|254780548|r 265 FSSNGKRALISVQKDEA---MDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESD------REGK------- 325 (447)
Q Consensus 265 wSPDG~~la~~~s~~g~---~~I~~~d~~~~~~~~lT~~~~~d---~~p~~spDG~~I~f~Sd------r~G~------- 325 (447)
|||||..|+-+- .|-. --|=++|.. ....++-..+..- -+-+|.+||+.++-... --|+
T Consensus 121 fs~dG~~LYATE-ndfd~~rGViGvYd~r-~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNlds 198 (366)
T COG3490 121 FSPDGRLLYATE-NDFDPNRGVIGVYDAR-EGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDS 198 (366)
T ss_pred CCCCCCEEEEEC-CCCCCCCCEEEEEECC-CCCCEECCCCCCCCCCCEEEEECCCCEEEEECCCEECCCCCCCCCCCHHH
T ss_conf 179875799522-7877787448998520-00002123346776821158835986899957864405555754234322
Q ss_pred --CCEEEEEE-CCCCCCEEEEEC---CCCEEEEEECCCCCEEEEEECCCC-C---EEEEEEECCCCCEEEE
Q ss_conf --33157640-256741112203---530000468776888999971499-1---5799998899967996
Q gi|254780548|r 326 --EQLYVMQS-NGSDQKRISQDK---EASYFDPVWSPQGDLIAFTKFSGE-K---FAIGVMKKDGSQERLL 386 (447)
Q Consensus 326 --~qiy~~~~-~g~~~~rlT~~~---~~~~~~p~wSPdG~~Iaf~~~~~~-~---~~i~~~~~~g~~~~~l 386 (447)
|-+-.++. .|.-.++.|... .-+......-+||+- .|-.+..| . ..+--+-..|++.+.+
T Consensus 199 MePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtv-wfgcQy~G~~~d~ppLvg~~~~g~~l~~~ 268 (366)
T COG3490 199 MEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTV-WFGCQYRGPRNDLPPLVGHFRKGEPLEFL 268 (366)
T ss_pred CCCCEEEEECCCCCHHHHCCCCHHHHHCCEEEEEECCCCCE-EEEEEEECCCCCCCCCEEECCCCCCCCCC
T ss_conf 58517998412554122113765553202444543799838-98777107876687400121589867225
No 219
>KOG0319 consensus
Probab=95.35 E-value=0.17 Score=27.03 Aligned_cols=14 Identities=21% Similarity=0.548 Sum_probs=6.9
Q ss_pred EEEEEECCCCCCEE
Q ss_conf 89998415554200
Q gi|254780548|r 126 VEFRLWDVKDRKQI 139 (447)
Q Consensus 126 v~~~L~dv~~~~~i 139 (447)
-..+|||+.++...
T Consensus 127 ~~v~VWdi~~~~~t 140 (775)
T KOG0319 127 GRVKVWDIKNGYCT 140 (775)
T ss_pred CEEEEEEEECCEEE
T ss_conf 52899981088789
No 220
>KOG1408 consensus
Probab=95.30 E-value=0.18 Score=26.93 Aligned_cols=22 Identities=18% Similarity=0.353 Sum_probs=14.9
Q ss_pred EEECCCCCEEEEEECCCCCEEEE
Q ss_conf 45515895567741378730389
Q gi|254780548|r 263 PRFSSNGKRALISVQKDEAMDIY 285 (447)
Q Consensus 263 p~wSPDG~~la~~~s~~g~~~I~ 285 (447)
-..||||++|| +..+.|+..+|
T Consensus 465 ~~vSp~gqhLA-sGDr~GnlrVy 486 (1080)
T KOG1408 465 LAVSPDGQHLA-SGDRGGNLRVY 486 (1080)
T ss_pred EEECCCCCEEC-CCCCCCCEEEE
T ss_conf 99778854001-56766735887
No 221
>KOG2919 consensus
Probab=95.24 E-value=0.19 Score=26.81 Aligned_cols=31 Identities=13% Similarity=0.372 Sum_probs=15.2
Q ss_pred ECCCCCCEEEEECCCCEEEEEECCCCCEEEEE
Q ss_conf 02567411122035300004687768889999
Q gi|254780548|r 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364 (447)
Q Consensus 333 ~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~ 364 (447)
-++..+-.+-.+..+......|.|||+++ |+
T Consensus 237 ~~~~~pl~llggh~gGvThL~~~edGn~l-fs 267 (406)
T KOG2919 237 DDGRRPLQLLGGHGGGVTHLQWCEDGNKL-FS 267 (406)
T ss_pred CCCCCCEEEECCCCCCEEEEEECCCCCEE-CC
T ss_conf 48997102321567872567752676740-23
No 222
>KOG4378 consensus
Probab=95.23 E-value=0.19 Score=26.79 Aligned_cols=69 Identities=17% Similarity=0.263 Sum_probs=40.6
Q ss_pred EECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCC
Q ss_conf 5768998489985034676443037711797179974379852444551589556774137873038998404774
Q gi|254780548|r 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293 (447)
Q Consensus 218 ~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~ 293 (447)
+|||-...| ++|- +-..+|++||..+......++. .-.-.+.+|+|+|..|+.-.+++ +||.+|+.+.+
T Consensus 215 cfspsne~l-~vsV--G~Dkki~~yD~~s~~s~~~l~y-~~Plstvaf~~~G~~L~aG~s~G---~~i~YD~R~~k 283 (673)
T KOG4378 215 CFSPSNEAL-LVSV--GYDKKINIYDIRSQASTDRLTY-SHPLSTVAFSECGTYLCAGNSKG---ELIAYDMRSTK 283 (673)
T ss_pred EECCCCCCE-EEEE--CCCCEEEEEECCCCCCCCEEEE-CCCCCEEEECCCCEEEEEECCCC---EEEEEECCCCC
T ss_conf 315886012-7983--2562588863444102010451-47742245348841898406786---18997524687
No 223
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=95.17 E-value=0.2 Score=26.67 Aligned_cols=235 Identities=14% Similarity=0.183 Sum_probs=113.5
Q ss_pred EEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEECC-CCCEEEE
Q ss_conf 999841555420000232337778899999998999997504455554417887513676442100123114-5540268
Q gi|254780548|r 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRY 205 (447)
Q Consensus 127 ~~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~f~triafv~~~~~~~~~~~~l~i~d~-DG~n~~~ 205 (447)
++.-+|..+|++++..+..+.. .+.+-+.+. ++||....+ +|+..|. +|.-.-.
T Consensus 116 ~l~Ald~~tG~~~W~~~~~~~v------------------~s~P~v~~g-~V~v~t~dg------~l~ald~~tG~~~W~ 170 (377)
T TIGR03300 116 EVIALDAEDGKELWRAKLSSEV------------------LSPPLVANG-LVVVRTNDG------RLTALDAATGERLWT 170 (377)
T ss_pred EEEEEECCCCCEEEEEECCCCE------------------ECCCEEECC-EEEEEECCC------EEEEEECCCCCEEEE
T ss_conf 5999997799599999079840------------------458788699-999997899------699997879978998
Q ss_pred EEECCCCC-----EEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEE--EEECCCC---------CEEEEEECCCC
Q ss_conf 86217640-----23455768998489985034676443037711797179--9743798---------52444551589
Q gi|254780548|r 206 LTPSRDQI-----LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK--RIGNFRS---------MILAPRFSSNG 269 (447)
Q Consensus 206 l~~~~~~~-----~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~--~~~~~~~---------~~~~p~wSPDG 269 (447)
.. ...+. ..+|....+ .+|+.+.++ +++.++..+|+..= .++...| ...+|... |
T Consensus 171 ~~-~~~p~ltlrg~s~p~~~~~---~v~~g~~~G---~l~ald~~tG~~~W~~~v~~~~G~telerl~Di~~~P~v~--~ 241 (377)
T TIGR03300 171 YS-RVTPALTLRGSASPVIADG---GVLVGFAGG---KLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVD--G 241 (377)
T ss_pred EE-CCCCCCCCCCCCCCEEECC---EEEEECCCC---EEEEEECCCCCEEEEEEECCCCCCCCCCCEECCCCCCCCC--C
T ss_conf 52-4687510156555379899---999982699---8999999999399881003566776421100124676213--9
Q ss_pred CEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEE-CCCC
Q ss_conf 556774137873038998404774110025776432025521674789972377653315764025674111220-3530
Q gi|254780548|r 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEAS 348 (447)
Q Consensus 270 ~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~-~~~~ 348 (447)
..+ |+.+.+| .++.+|+.+|+...=.+..+ -..|.- ++..|+ +.+..| +||.+|..+|+..--+.. ....
T Consensus 242 ~~v-y~~s~~G--~l~a~d~~sG~~~W~~~~ss-~~~~~v--~~~~vy-v~~~~g--~l~Ald~~tG~~~W~~~~l~~r~ 312 (377)
T TIGR03300 242 GQV-YAVSYQG--RVAALDLRSGRVLWKRDASS-YQGPAV--DDNRLY-VTDADG--VVVALDRRSGSELWKNDELKYRQ 312 (377)
T ss_pred CEE-EEEECCC--EEEEEECCCCCEEEEEECCC-CCCEEE--ECCEEE-EECCCC--CEEEEECCCCCEEECCCCCCCCC
T ss_conf 889-9970488--49998721694730152675-444058--756199-986898--47999989995780145556655
Q ss_pred EEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEE-EE-ECC-CCCCCCEECCCCCEEEEEEEECC
Q ss_conf 000468776888999971499157999988999679-96-627-87554378878998999995089
Q gi|254780548|r 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LL-VED-SNLQAPTWSPSGRSLIFSRKKDG 412 (447)
Q Consensus 349 ~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~-~l-t~~-~~~e~P~wSPDG~~i~f~~~~~g 412 (447)
...|... |+.+++...++ .++.+|.++|+.. +. +.+ +..-.|...- + . +|...++|
T Consensus 313 ~s~P~~~--g~~v~vgd~~G---~l~~ld~~tG~~~~r~~~~g~~i~~~Pvv~~-~-~-l~v~s~~G 371 (377)
T TIGR03300 313 LTAPAVV--GGYLVVGDFEG---YLHWLSREDGSFVARLKTDGSGIASPPVVVG-D-G-LLVQTRDG 371 (377)
T ss_pred CCCCEEE--CCEEEEECCCC---EEEEEECCCCCEEEEEECCCCCEEECCEEEC-C-E-EEEEECCC
T ss_conf 4488898--99999996898---8999998889799999858995066889989-9-9-99994993
No 224
>pfam07250 Glyoxal_oxid_N Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium.
Probab=95.17 E-value=0.2 Score=26.66 Aligned_cols=48 Identities=10% Similarity=0.054 Sum_probs=27.3
Q ss_pred EEEECCCCCEEEEEC-CCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEC
Q ss_conf 377117971799743-7985244455158955677413787303899840
Q gi|254780548|r 241 LMDTRIDRAPKRIGN-FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289 (447)
Q Consensus 241 ~~~~~~g~~~~~~~~-~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~ 289 (447)
.+|+.++.. +.+.- ..-..++.++-|||+.+-.--..+|...|..++.
T Consensus 50 ~yD~~tn~~-rpL~v~TdtwCSsG~~l~dG~lvqtGG~~dG~~~iR~~~P 98 (243)
T pfam07250 50 LYDVATNTI-RPLTVQTDTWCSSGALLSDGTLVQTGGDGDGERKVRYFSP 98 (243)
T ss_pred EEECCCCCE-EEECCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEC
T ss_conf 984588978-6430535784678789989988983788877622799607
No 225
>KOG0295 consensus
Probab=95.12 E-value=0.2 Score=26.58 Aligned_cols=214 Identities=16% Similarity=0.214 Sum_probs=101.0
Q ss_pred EEEEEECCC-CCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECC-CCCEEEEECCCCCEEEEEECCC
Q ss_conf 001231145-54026886217640234557689984899850346764430377117-9717997437985244455158
Q gi|254780548|r 191 NSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRIGNFRSMILAPRFSSN 268 (447)
Q Consensus 191 ~~l~i~d~D-G~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~-g~~~~~~~~~~~~~~~p~wSPD 268 (447)
..|.+-|+- |.-.+.| ++...-++.-+++.-|+.+|=.| .+. .+.+.|..+ -+..+.+..++-..+++.|-|-
T Consensus 130 ~tikv~D~~tg~~e~~L-rGHt~sv~di~~~a~Gk~l~tcS---sDl-~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~ 204 (406)
T KOG0295 130 ATIKVFDTETGELERSL-RGHTDSVFDISFDASGKYLATCS---SDL-SAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPL 204 (406)
T ss_pred CEEEEEECCCHHHHHHH-HCCCCCEEEEEEECCCCEEEECC---CCC-CHHHEEHHHHHHHHHHHCCCCCCEEEEEEEEC
T ss_conf 46999971561256555-33224105799804761798647---755-42310378899999874186642356899865
Q ss_pred CCEEEEEECCCCCEEEEEEECCCCC-CCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCC-EEEEEECCCCCCEEEEECC
Q ss_conf 9556774137873038998404774-1100257764320255216747899723776533-1576402567411122035
Q gi|254780548|r 269 GKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKE 346 (447)
Q Consensus 269 G~~la~~~s~~g~~~I~~~d~~~~~-~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~q-iy~~~~~g~~~~rlT~~~~ 346 (447)
|..|+ +.++|....+| +.++|- +++++.++.....-.-.-||. .|.|- ++-| +-+.-+.+++-+.+-.+..
T Consensus 205 gd~il-S~srD~tik~W--e~~tg~cv~t~~~h~ewvr~v~v~~DGt--i~As~--s~dqtl~vW~~~t~~~k~~lR~hE 277 (406)
T KOG0295 205 GDHIL-SCSRDNTIKAW--ECDTGYCVKTFPGHSEWVRMVRVNQDGT--IIASC--SNDQTLRVWVVATKQCKAELREHE 277 (406)
T ss_pred CCEEE-ECCCCCCEEEE--ECCCCEEEEECCCCHHHEEEEEECCCEE--EEEEC--CCCCEEEEEEECCCHHHHHHHCCC
T ss_conf 87652-02554525677--5046536775068557389999658805--99843--798529999714633666520243
Q ss_pred CCEEEEEECC--------------CCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCC---CCCEECCCCCEEEEEEE
Q ss_conf 3000046877--------------688899997149915799998899967996627875---54378878998999995
Q gi|254780548|r 347 ASYFDPVWSP--------------QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL---QAPTWSPSGRSLIFSRK 409 (447)
Q Consensus 347 ~~~~~p~wSP--------------dG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~~~~---e~P~wSPDG~~i~f~~~ 409 (447)
-...--+|.| +|..+.++...++. |-..|..++. -++|=.+++ ..-.|+|-||+|+=..
T Consensus 278 h~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDkt--Ik~wdv~tg~-cL~tL~ghdnwVr~~af~p~Gkyi~Sca- 353 (406)
T KOG0295 278 HPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKT--IKIWDVSTGM-CLFTLVGHDNWVRGVAFSPGGKYILSCA- 353 (406)
T ss_pred CCEEEEEECCCCCCCCHHHCCCCCCCCCEEEEECCCCE--EEEEECCCCE-EEEEEECCCCEEEEEEECCCCEEEEEEE-
T ss_conf 41478986140137523431678888617886046654--8999635771-8999951655033147768981899970-
Q ss_pred ECCCCCEEEEEEE
Q ss_conf 0898733799998
Q gi|254780548|r 410 KDGDTGSKLYSID 422 (447)
Q Consensus 410 ~~g~~~~~l~~~~ 422 (447)
.++ ...+|-+.
T Consensus 354 DDk--tlrvwdl~ 364 (406)
T KOG0295 354 DDK--TLRVWDLK 364 (406)
T ss_pred CCC--CEEEEEEC
T ss_conf 698--17999704
No 226
>KOG1523 consensus
Probab=94.86 E-value=0.24 Score=26.10 Aligned_cols=32 Identities=22% Similarity=0.512 Sum_probs=22.3
Q ss_pred EEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEE
Q ss_conf 00468776888999971499157999988999679
Q gi|254780548|r 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384 (447)
Q Consensus 350 ~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~ 384 (447)
....|||.|..|+|..-+.. +++.|..+..++
T Consensus 210 h~v~fs~sG~~lawv~Hds~---v~~~da~~p~~~ 241 (361)
T KOG1523 210 HGVLFSPSGNRLAWVGHDST---VSFVDAAGPSER 241 (361)
T ss_pred EEEEECCCCCEEEEECCCCC---EEEEECCCCCHH
T ss_conf 03676787777567527871---577515797020
No 227
>pfam04053 Coatomer_WDAD Coatomer WD associated region. This region is composed of WD40 repeats.
Probab=94.79 E-value=0.25 Score=25.99 Aligned_cols=44 Identities=14% Similarity=0.249 Sum_probs=18.5
Q ss_pred EEEEECCCCCC-CCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEE
Q ss_conf 89984047741-100257764320255216747899723776533157640
Q gi|254780548|r 284 IYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333 (447)
Q Consensus 284 I~~~d~~~~~~-~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~ 333 (447)
|..+|.+++++ +|+.-.+ + ....||+||+.++..++.+ +|+++.
T Consensus 126 i~fyDw~~~~~ir~I~v~~-v-k~V~Ws~~g~~VAl~s~~~----~~il~~ 170 (435)
T pfam04053 126 ISFYDWEQGKLIRRIDVSP-V-KYVIWSDDGELVALLTKDT----VYILNY 170 (435)
T ss_pred EEEEECCCCCEEEEEECCC-C-CEEEEECCCCEEEEEECCE----EEEEEC
T ss_conf 8999984462555671377-7-3799928998899998884----999954
No 228
>KOG0264 consensus
Probab=94.68 E-value=0.26 Score=25.81 Aligned_cols=57 Identities=16% Similarity=0.253 Sum_probs=22.9
Q ss_pred EEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEE-CCCCCC--CCEECCCCCEEEEEE
Q ss_conf 00468776888999971499157999988999679966-278755--437887899899999
Q gi|254780548|r 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQ--APTWSPSGRSLIFSR 408 (447)
Q Consensus 350 ~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt-~~~~~e--~P~wSPDG~~i~f~~ 408 (447)
...+|.|-+..|.-+...++ .+++.|+..-...+.+ ++..+| ...|||+-..|+=++
T Consensus 276 n~~~fnp~~~~ilAT~S~D~--tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASS 335 (422)
T KOG0264 276 NCVAFNPFNEFILATGSADK--TVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASS 335 (422)
T ss_pred EEEEECCCCCCEEEECCCCC--CEEEEECHHCCCCCEECCCCCCCEEEEEECCCCCCEEEEC
T ss_conf 68985787775588626787--2797521002567545357776358988679987456741
No 229
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.62 E-value=0.27 Score=25.72 Aligned_cols=110 Identities=9% Similarity=0.268 Sum_probs=42.0
Q ss_pred EEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCE--EEEEECCCCCEEEEEECCCCCEEEEEEECCC
Q ss_conf 23455768998489985034676443037711797179974379852--4445515895567741378730389984047
Q gi|254780548|r 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291 (447)
Q Consensus 214 ~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~--~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~ 291 (447)
+.+-.|+||-+.+ |+. . ++.+.|--.++. |+-.+.+ ..++.. -+-.|.-+|+ .+.+-.++....++.++.++
T Consensus 88 vS~LTynp~~rtL-Fav-~-n~p~~iVElt~~-Gdlirti-PL~g~~DpE~Ieyig~n~-fvi~dER~~~l~~~~vd~~t 161 (316)
T COG3204 88 VSSLTYNPDTRTL-FAV-T-NKPAAIVELTKE-GDLIRTI-PLTGFSDPETIEYIGGNQ-FVIVDERDRALYLFTVDADT 161 (316)
T ss_pred CCCEEECCCCCEE-EEE-C-CCCCEEEEEECC-CCEEEEE-CCCCCCCHHHEEEECCCE-EEEEEHHCCEEEEEEECCCC
T ss_conf 4410667876628-996-4-899658999447-8368873-355568945807954977-99886122658999986896
Q ss_pred CCCC----CCC------CCCCCCCCEEEECCCCEEEEEECCCCCCC-EEEEE
Q ss_conf 7411----002------57764320255216747899723776533-15764
Q gi|254780548|r 292 NATE----RLT------NTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQ 332 (447)
Q Consensus 292 ~~~~----~lT------~~~~~d~~p~~spDG~~I~f~Sdr~G~~q-iy~~~ 332 (447)
.... +++ .+.|.+ .-+|.|..+++.|.-.| +|+ ||.++
T Consensus 162 ~~~~~~~~~i~L~~~~k~N~GfE-GlA~d~~~~~l~~aKEr--~P~~I~~~~ 210 (316)
T COG3204 162 TVISAKVQKIPLGTTNKKNKGFE-GLAWDPVDHRLFVAKER--NPIGIFEVT 210 (316)
T ss_pred CEEECCCEEEECCCCCCCCCCCE-EEECCCCCCEEEEEECC--CCCEEEEEE
T ss_conf 18721325875255688775723-34417788648999813--882899981
No 230
>pfam02333 Phytase Phytase. Phytase is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity and has been shown to have a six- bladed propeller folding architecture.
Probab=94.53 E-value=0.28 Score=25.59 Aligned_cols=30 Identities=17% Similarity=0.180 Sum_probs=13.2
Q ss_pred EEEEEECCCCCCCCEEEEEECCCCCEEEEEE
Q ss_conf 7887513676442100123114554026886
Q gi|254780548|r 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207 (447)
Q Consensus 177 iafv~~~~~~~~~~~~l~i~d~DG~n~~~l~ 207 (447)
||.++.+... ...-.||..|.+......++
T Consensus 88 iavaSnR~~g-~n~l~~f~id~~~~~l~~~~ 117 (353)
T pfam02333 88 IAAASNRSEG-KNTIEIYAIDGDKGKLKSIT 117 (353)
T ss_pred EEEEECCCCC-CCEEEEEEECCCCCCEEECC
T ss_conf 9999567688-86699999778888413425
No 231
>KOG0313 consensus
Probab=94.44 E-value=0.3 Score=25.45 Aligned_cols=217 Identities=16% Similarity=0.198 Sum_probs=115.4
Q ss_pred EEEECCCCCEEEEEEECCCCCEEEEEE-CCCCCEEEEEEECCCCCCCCCEEEECCCCCE--EEEECCCCCEEEEEECCCC
Q ss_conf 123114554026886217640234557-6899848998503467644303771179717--9974379852444551589
Q gi|254780548|r 193 LCVMDRDGANIRYLTPSRDQILFEPRF-SPNQQKVAYATYDDEDILRVYLMDTRIDRAP--KRIGNFRSMILAPRFSSNG 269 (447)
Q Consensus 193 l~i~d~DG~n~~~l~~~~~~~~~sP~w-SpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~--~~~~~~~~~~~~p~wSPDG 269 (447)
+.+.|.-|.-.+++..+.+++ .+.+| .+|-..-.|++....+...+|..+....... ++-..+++..-+.+-.+||
T Consensus 127 ~riWd~~Gk~~~~~~Ght~~i-k~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sg 205 (423)
T KOG0313 127 SRIWDLKGKSIKTIVGHTGPI-KSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSG 205 (423)
T ss_pred EEEEECCCCEEEEEECCCCCE-EEEEEEECCCCCCEEEEECCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEEECCCC
T ss_conf 688844883689983578650-0047872277440488814773489987517502566776740455640388864888
Q ss_pred CEEEEEECCCCCEEEEE--EECCC----CCCC----------CCCC--------CCCCCCCEEEECCCCEEEEEECCCCC
Q ss_conf 55677413787303899--84047----7411----------0025--------77643202552167478997237765
Q gi|254780548|r 270 KRALISVQKDEAMDIYS--VDLQS----NATE----------RLTN--------TLFINISASYSPDSSQIVFESDREGK 325 (447)
Q Consensus 270 ~~la~~~s~~g~~~I~~--~d~~~----~~~~----------~lT~--------~~~~d~~p~~spDG~~I~f~Sdr~G~ 325 (447)
.+++ +.+.|....||- .+.++ -..+ ..|. |.....+..|++ ...+|...-..
T Consensus 206 tr~~-SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d--~~v~yS~SwDH- 281 (423)
T KOG0313 206 TRFC-SGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD--ATVIYSVSWDH- 281 (423)
T ss_pred CEEE-EECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEECC--CCCEEEECCCC-
T ss_conf 7698-3013440466256777553111101022344331001365674388414666224689759--87057621553-
Q ss_pred CCEEEEEECCC-CCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCC--E-E-EEE-CCCCCCCCEECC
Q ss_conf 33157640256-7411122035300004687768889999714991579999889996--7-9-966-278755437887
Q gi|254780548|r 326 EQLYVMQSNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--E-R-LLV-EDSNLQAPTWSP 399 (447)
Q Consensus 326 ~qiy~~~~~g~-~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~--~-~-~lt-~~~~~e~P~wSP 399 (447)
.|-+.|+..+ ...+++ +.........+|+-+.|+-.+. ..+|-++|+..+. . + ++. +....++-.|+|
T Consensus 282 -TIk~WDletg~~~~~~~--~~ksl~~i~~~~~~~Ll~~gss---dr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp 355 (423)
T KOG0313 282 -TIKVWDLETGGLKSTLT--TNKSLNCISYSPLSKLLASGSS---DRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSP 355 (423)
T ss_pred -EEEEEEEECCCCEEEEE--CCCCEEEEECCCCCCEEEECCC---CCCEEECCCCCCCCCEEEEEEECCHHHHHHEECCC
T ss_conf -47898752165022011--3752157420564240320577---77416417988998456786504211444031488
Q ss_pred CCCEEEEEEEECCCCCEEEEEEE
Q ss_conf 89989999950898733799998
Q gi|254780548|r 400 SGRSLIFSRKKDGDTGSKLYSID 422 (447)
Q Consensus 400 DG~~i~f~~~~~g~~~~~l~~~~ 422 (447)
-..++.-+...++. ..+|-+.
T Consensus 356 ~~~~~~~S~S~D~t--~klWDvR 376 (423)
T KOG0313 356 TNEFQLVSGSYDNT--VKLWDVR 376 (423)
T ss_pred CCCEEEEEEECCCE--EEEEEEC
T ss_conf 87428998741880--7888704
No 232
>KOG0650 consensus
Probab=94.38 E-value=0.31 Score=25.37 Aligned_cols=145 Identities=14% Similarity=0.215 Sum_probs=65.5
Q ss_pred EEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCC
Q ss_conf 34557689984899850346764430377117971799743798524445515895567741378730389984047741
Q gi|254780548|r 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294 (447)
Q Consensus 215 ~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~ 294 (447)
..-.|.-+|..+|-|.-. +....|+++++............+|......|.|---.++++ ++. .+-++|+....+
T Consensus 525 ~~vtWHrkGDYlatV~~~-~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVa-Tq~---~vRiYdL~kqel 599 (733)
T KOG0650 525 RQVTWHRKGDYLATVMPD-SGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVA-TQR---SVRIYDLSKQEL 599 (733)
T ss_pred CEEEEECCCCEEEEECCC-CCCCEEEEEECCCCCCCCCHHHCCCCEEEEEECCCCCEEEEE-ECC---CEEEEEHHHHHH
T ss_conf 202561478668996367-876359987100000228553338844688864887369997-425---068872367899
Q ss_pred C-C-CCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCC----------CCEEEEECCCCEEEEEECCCCCEEE
Q ss_conf 1-0-02577643202552167478997237765331576402567----------4111220353000046877688899
Q gi|254780548|r 295 E-R-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD----------QKRISQDKEASYFDPVWSPQGDLIA 362 (447)
Q Consensus 295 ~-~-lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~----------~~rlT~~~~~~~~~p~wSPdG~~Ia 362 (447)
. . +|....++ +-+-+|.|..|+-.|. .++---|-+++.+.. .+-+.+.+.+.... +-|+||..++
T Consensus 600 vKkL~tg~kwiS-~msihp~GDnli~gs~-d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfa-s~sdDgtv~V 676 (733)
T KOG0650 600 VKKLLTGSKWIS-SMSIHPNGDNLILGSY-DKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFA-SGSDDGTVIV 676 (733)
T ss_pred HHHHHCCCEEEE-EEEECCCCCEEEEECC-CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE-EECCCCCEEE
T ss_conf 998845774644-4444489870788437-770699975667656677652155533200136664156-6448973899
Q ss_pred EEECC
Q ss_conf 99714
Q gi|254780548|r 363 FTKFS 367 (447)
Q Consensus 363 f~~~~ 367 (447)
|..+.
T Consensus 677 fhg~V 681 (733)
T KOG0650 677 FHGMV 681 (733)
T ss_pred EEEEE
T ss_conf 94001
No 233
>KOG1520 consensus
Probab=94.32 E-value=0.32 Score=25.28 Aligned_cols=27 Identities=15% Similarity=0.219 Sum_probs=14.4
Q ss_pred CCCCEEEEEEEECCCCCEEEEEEECCCC
Q ss_conf 7899899999508987337999988997
Q gi|254780548|r 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGR 426 (447)
Q Consensus 399 PDG~~i~f~~~~~g~~~~~l~~~~~~G~ 426 (447)
++|+++.+.++-+.. ..+||.=++...
T Consensus 342 ~~g~~~~~~sev~E~-dg~LyiGS~~~p 368 (376)
T KOG1520 342 KEGKVITLVSEVGEH-DGHLYIGSLFNP 368 (376)
T ss_pred CCCCCEEEEEEEEEC-CCEEEECCCCCC
T ss_conf 888704799997430-885898215734
No 234
>KOG3621 consensus
Probab=94.24 E-value=0.32 Score=25.21 Aligned_cols=51 Identities=14% Similarity=0.261 Sum_probs=21.0
Q ss_pred EECCCCCCCCCCCC---CCCCCCEEEECC---CCEEEEEECCCCCCCEEEEEECCCCC
Q ss_conf 84047741100257---764320255216---74789972377653315764025674
Q gi|254780548|r 287 VDLQSNATERLTNT---LFINISASYSPD---SSQIVFESDREGKEQLYVMQSNGSDQ 338 (447)
Q Consensus 287 ~d~~~~~~~~lT~~---~~~d~~p~~spD---G~~I~f~Sdr~G~~qiy~~~~~g~~~ 338 (447)
.+.+.+..+|+-+- .-++..+.|-|- ++.---...|-|. .+|.+|++|.-.
T Consensus 194 c~tE~eti~QIG~k~R~~~~~~GACF~~g~~~~q~~~IycaRPG~-RlWead~~G~V~ 250 (726)
T KOG3621 194 CQTEAETITQIGKKPRKSLIDFGACFFPGQCKAQKPQIYCARPGL-RLWEADFAGEVI 250 (726)
T ss_pred EECCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCC-CEEEEECCEEEE
T ss_conf 312266788754777677666632881053457885489836877-057763242589
No 235
>KOG3914 consensus
Probab=93.93 E-value=0.38 Score=24.78 Aligned_cols=20 Identities=20% Similarity=0.333 Sum_probs=11.1
Q ss_pred CCCCCEEEEEECCCCCEEEE
Q ss_conf 17640234557689984899
Q gi|254780548|r 209 SRDQILFEPRFSPNQQKVAY 228 (447)
Q Consensus 209 ~~~~~~~sP~wSpDG~~Iay 228 (447)
++.+++.--+||||++.|.+
T Consensus 149 GhvSml~dVavS~D~~~Iit 168 (390)
T KOG3914 149 GHVSMLLDVAVSPDDQFIIT 168 (390)
T ss_pred HHHHHHHEEEECCCCCEEEE
T ss_conf 04632210266688878997
No 236
>KOG0294 consensus
Probab=93.83 E-value=0.39 Score=24.66 Aligned_cols=52 Identities=19% Similarity=0.275 Sum_probs=18.3
Q ss_pred EEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEE
Q ss_conf 4551589556774137873038998404774110025776432025521674789
Q gi|254780548|r 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317 (447)
Q Consensus 263 p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~ 317 (447)
-+.+|-| +||.+...|+.-.+| ||-.|..--+++-.-+.+...|+|.|++.+
T Consensus 133 lsiHPS~-KLALsVg~D~~lr~W--NLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~ 184 (362)
T KOG0294 133 LSIHPSG-KLALSVGGDQVLRTW--NLVRGRVAFVLNLKNKATLVSWSPQGDHFV 184 (362)
T ss_pred EEECCCC-CEEEEECCCCEEEEE--EHHCCCCCEEEECCCCCEEEEECCCCCEEE
T ss_conf 5765777-367997277435532--113475104761577520568747898799
No 237
>KOG0303 consensus
Probab=93.54 E-value=0.44 Score=24.34 Aligned_cols=106 Identities=17% Similarity=0.232 Sum_probs=46.7
Q ss_pred CCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCC-EEEEEECCCCCEEEEE-ECCCCCEEEEEE
Q ss_conf 76402345576899848998503467644303771179717997437985-2444551589556774-137873038998
Q gi|254780548|r 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALIS-VQKDEAMDIYSV 287 (447)
Q Consensus 210 ~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~-~~~p~wSPDG~~la~~-~s~~g~~~I~~~ 287 (447)
....+.|-.|+-||..++-+. ++ .+|-++|.++|....---.+.|. +.-..|-.||+ |+-+ .++-.+-++-+.
T Consensus 172 hpd~i~S~sfn~dGs~l~Ttc-kD---KkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~-i~tTGfsr~seRq~aLw 246 (472)
T KOG0303 172 HPDMVYSMSFNRDGSLLCTTC-KD---KKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGK-IFTTGFSRMSERQIALW 246 (472)
T ss_pred CCCEEEEEEECCCCCEEEEEC-CC---CEEEEECCCCCCEEEECCCCCCCCCCEEEEECCCC-EEEECCCCCCCCCEECC
T ss_conf 998599989626876565402-55---41587758887275552455677753369932685-54404364452110023
Q ss_pred ECCC----CCCCCCCCCCCCCCCEEEECCCCEEEEEECC
Q ss_conf 4047----7411002577643202552167478997237
Q gi|254780548|r 288 DLQS----NATERLTNTLFINISASYSPDSSQIVFESDR 322 (447)
Q Consensus 288 d~~~----~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr 322 (447)
|.+. .....|-.+.|+ .-|.|-||-+ |+|.-..
T Consensus 247 dp~nl~eP~~~~elDtSnGv-l~PFyD~dt~-ivYl~GK 283 (472)
T KOG0303 247 DPNNLEEPIALQELDTSNGV-LLPFYDPDTS-IVYLCGK 283 (472)
T ss_pred CCCCCCCCCEEEEECCCCCE-EEEEECCCCC-EEEEEEC
T ss_conf 73224686145774168846-8750549987-7999855
No 238
>PRK10153 DNA-binding transcriptional activator CadC; Provisional
Probab=93.42 E-value=0.46 Score=24.21 Aligned_cols=95 Identities=16% Similarity=0.322 Sum_probs=68.0
Q ss_pred CHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCEE
Q ss_conf 03578999999862017514550865503466761114577887415621899999740466225789998415554200
Q gi|254780548|r 60 ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI 139 (447)
Q Consensus 60 ~~~~~i~~ii~~DL~~SG~F~~i~~~~~~~~~~~~~~~~~f~~W~~~gad~lv~G~i~~~~~~~~~v~~~L~dv~~~~~i 139 (447)
.+..-+.+-+..||..-.-|.++++..|...+.... |....| ++..+.+ +--++++++|-.+++.+
T Consensus 217 ~la~Gi~~klm~~L~~ys~y~v~~k~~y~~~~~~~~-----------gK~l~v--~~~~q~~-~~yL~vey~nn~S~~~~ 282 (512)
T PRK10153 217 SLADGIGQLLMADLNTVSTFMVHDKTNYNINEGISP-----------GKTLSV--RVVNQRQ-QCFLSVELRDNADGSVL 282 (512)
T ss_pred HHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCC-----------CCEEEE--EEEECCC-CEEEEEEEEECCCCCEE
T ss_conf 888679999999987524536651000357888677-----------856899--9996599-56999999976887633
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 00232337778899999998999997504
Q gi|254780548|r 140 IGKKFFSSPASWRKIAHTISDDIYQSITG 168 (447)
Q Consensus 140 ~~~~~~~~~~~~R~~ah~~ad~i~~~ltG 168 (447)
++++|......+..+-..+.|++...|.=
T Consensus 283 l~R~Y~it~~~l~~vl~~~l~dLl~aL~i 311 (512)
T PRK10153 283 FSKQYFLTNSNQLSVQNDLSQDLSRALNQ 311 (512)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 05545478478999999999999998589
No 239
>KOG0646 consensus
Probab=93.40 E-value=0.46 Score=24.18 Aligned_cols=48 Identities=17% Similarity=0.077 Sum_probs=23.7
Q ss_pred CCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECC
Q ss_conf 3037711797179974379852444551589556774137873038998404
Q gi|254780548|r 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290 (447)
Q Consensus 239 i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~ 290 (447)
+-++|+..|.-.. -..+|....+-+.+|-++++ |..+.+|. ||+.++.
T Consensus 200 ~k~wdlS~g~LLl-ti~fp~si~av~lDpae~~~-yiGt~~G~--I~~~~~~ 247 (476)
T KOG0646 200 IKLWDLSLGVLLL-TITFPSSIKAVALDPAERVV-YIGTEEGK--IFQNLLF 247 (476)
T ss_pred EEEEEECCCEEEE-EEECCCCCEEEEECCCCCEE-EECCCCCE--EEEEEHH
T ss_conf 8999703461567-88647752058885300089-96377635--7723212
No 240
>KOG0644 consensus
Probab=93.09 E-value=0.32 Score=25.25 Aligned_cols=46 Identities=9% Similarity=-0.021 Sum_probs=21.4
Q ss_pred HCCCCEEECCHHHCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEEECCCC
Q ss_conf 0175145508655034667611145778874156218999997404662
Q gi|254780548|r 74 QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKD 122 (447)
Q Consensus 74 ~~SG~F~~i~~~~~~~~~~~~~~~~~f~~W~~~gad~lv~G~i~~~~~~ 122 (447)
--+|.|.+++...-.... --+.-+-.|...+++-+---++...+++
T Consensus 108 Lgtg~qsLl~r~k~~~~~---~~~~s~~~~~h~~~~~~~~~sl~s~~~~ 153 (1113)
T KOG0644 108 LGTGRQSLLRRAKDIRHT---VWKGSAFRWPHMHADQVRGVSLRSIGGG 153 (1113)
T ss_pred HCCHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCCCCCCEECCCCCC
T ss_conf 100167887554202344---4664101342236764466121257850
No 241
>KOG1963 consensus
Probab=93.04 E-value=0.52 Score=23.83 Aligned_cols=68 Identities=13% Similarity=0.089 Sum_probs=43.9
Q ss_pred EEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEC
Q ss_conf 2345576899848998503467644303771179717997437985244455158955677413787303899840
Q gi|254780548|r 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289 (447)
Q Consensus 214 ~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~ 289 (447)
+.+-+||+||..|. .++...-+-++.+++++ ++.|-...+....-.|||||...+..+. |. +|.++.+
T Consensus 254 V~~L~fS~~G~~Ll----SGG~E~VLv~Wq~~T~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~-DN--qI~li~~ 321 (792)
T KOG1963 254 VNSLSFSSDGAYLL----SGGREGVLVLWQLETGK-KQFLPRLGSPILHIVVSPDSDLYSLVLE-DN--QIHLIKA 321 (792)
T ss_pred CCEEEEECCCCEEE----ECCCCEEEEEEEECCCC-CCCCCCCCCEEEEEEECCCCCEEEEEEC-CC--EEEEEEC
T ss_conf 02258743775474----36632489998606787-4113346870678998689975799952-76--3899944
No 242
>pfam11768 DUF3312 Protein of unknown function (DUF3312). This is a eukaryotic family of uncharacterized proteins.
Probab=92.99 E-value=0.53 Score=23.78 Aligned_cols=264 Identities=15% Similarity=0.146 Sum_probs=121.5
Q ss_pred HHHHHHCCCCEEEEEEEEECCCCEEEEEEEEECCCC---CCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC--C-
Q ss_conf 788741562189999974046622578999841555---4200002323377788999999989999975044555--5-
Q gi|254780548|r 100 FQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD---RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD--F- 173 (447)
Q Consensus 100 f~~W~~~gad~lv~G~i~~~~~~~~~v~~~L~dv~~---~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~--f- 173 (447)
+..|+..-.=-|+. ++| +-|.+.+ +..+ .+.++.|.+.|+. .+..++|.++- ..--+ |
T Consensus 40 ~~~Wk~~~~~qLll------snG-vlv~i~~-~~~~gdlekiv~DK~LvgKL-----~sd~isDav~t---~~~Ii~sf~ 103 (544)
T pfam11768 40 CSKWKNKYICQLLL------SNG-VLVHISL-NPFGGDLERVVFDKYLVGKL-----ISETITDAVLT---DSHILLSFL 103 (544)
T ss_pred EEEECCCCEEEEEE------CCC-EEEEEEE-CCCCCCEEEEEEEHHHHCCC-----CCCCEEEEEEC---CCEEEEEEC
T ss_conf 99964774599996------386-5999997-47888636999642232026-----66612105850---878999985
Q ss_pred -CCCEEEEEECCCCCCC--C-------EEEEEECCCCCEEE----EEEECCCCCEEEEEECCCCCEEEEE----EECCCC
Q ss_conf -4417887513676442--1-------00123114554026----8862176402345576899848998----503467
Q gi|254780548|r 174 -NSRILFVSESVVSGII--K-------NSLCVMDRDGANIR----YLTPSRDQILFEPRFSPNQQKVAYA----TYDDED 235 (447)
Q Consensus 174 -~triafv~~~~~~~~~--~-------~~l~i~d~DG~n~~----~l~~~~~~~~~sP~wSpDG~~Iay~----s~~~~~ 235 (447)
.+++.||.-+...+.. . .+|.-.|.-|...| .|.-.... -+--.|-|-...=+|- + .+.+
T Consensus 104 ~~nkL~~v~l~k~~~~~~~~eKlS~ldpKis~~~ipGp~~rk~~RhL~vN~~q-D~~vvWw~s~~~ev~PW~P~~-~e~d 181 (544)
T pfam11768 104 NENQLTFVQLQKPTARNRRLEKLSLMDPKISYVIIPGPTGRKLDRHLAVNSSQ-DLVVVWWPSSQNEVYPWRPTV-GDQD 181 (544)
T ss_pred CCCEEEEEEEECCCCCCCCCHHCCCCCCCEEEEECCCCCCCCCCEEEEECCCC-CEEEEECCCCCCCCCCCCCCC-CHHH
T ss_conf 87779999962465654440110257872478876788777353477651357-679997458887766889865-2110
Q ss_pred CCCCCEEEECCCCCEEEEECCC--CCEEEEEECCCCCEEEEEEC----CCCCE--EEEEEECCCCCCCCCCC--C--CCC
Q ss_conf 6443037711797179974379--85244455158955677413----78730--38998404774110025--7--764
Q gi|254780548|r 236 ILRVYLMDTRIDRAPKRIGNFR--SMILAPRFSSNGKRALISVQ----KDEAM--DIYSVDLQSNATERLTN--T--LFI 303 (447)
Q Consensus 236 ~~~i~~~~~~~g~~~~~~~~~~--~~~~~p~wSPDG~~la~~~s----~~g~~--~I~~~d~~~~~~~~lT~--~--~~~ 303 (447)
...+.++....+ +.+++.... +......||-.-...+++.. .+|++ |...+....++.+|+.- - ++-
T Consensus 182 RANl~l~~~~~~-kLE~L~y~rTE~dPl~v~Fs~~~~~qi~tvEqkvs~~ge~~~D~c~YE~~~~k~qrvaVtsiPl~s~ 260 (544)
T pfam11768 182 RANLHVLKISGA-KLEVLCYCWTEGDPLDVDFSLLQPYQVHTVEQKVSKKGEPSADSCIYECARNKMRRVAVTSIPLRSQ 260 (544)
T ss_pred HCCEEEEEECCC-CEEEEEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEEEECCCEEEEEEEEEEECCCC
T ss_conf 021799984488-6589999961488468996248883799998753779985101689881367178899999724886
Q ss_pred CCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCE
Q ss_conf 32025521674789972377653315764025674111220353000046877688899997149915799998899967
Q gi|254780548|r 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383 (447)
Q Consensus 304 d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~ 383 (447)
-.+-+++|+.++++--.. .|+ |-..|..- .++.++... .--.--+|.|||..++ +....|..++|-+.+..=..
T Consensus 261 v~~c~~n~~edkL~LGC~-D~S--ivLyD~~r-~~T~~~qa~-~~P~~~~WH~~gai~~-V~n~~GelQ~FD~ALs~i~~ 334 (544)
T pfam11768 261 VCSCARSPDEEKLLLGCI-DSS--LVLYDEHR-GVTLLAQAA-VIPHLVAWHPDSAIVL-VANEQGELQCFDIALSPIRM 334 (544)
T ss_pred CEEECCCCHHHEEEEECC-CCC--EEEEECCC-CEEEEEECC-CCCHHHEECCCCCEEE-EECCCCEEEEEEECCCCHHH
T ss_conf 235447831430686124-686--79874466-546765313-3522212268884899-83576416874200352122
Q ss_pred EEEEC
Q ss_conf 99662
Q gi|254780548|r 384 RLLVE 388 (447)
Q Consensus 384 ~~lt~ 388 (447)
+.|++
T Consensus 335 qllsE 339 (544)
T pfam11768 335 QLLSE 339 (544)
T ss_pred HHHCC
T ss_conf 23305
No 243
>pfam05787 DUF839 Bacterial protein of unknown function (DUF839). This family consists of several bacterial proteins of unknown function that contain a predicted beta-propeller repeats.
Probab=92.90 E-value=0.55 Score=23.69 Aligned_cols=39 Identities=21% Similarity=0.377 Sum_probs=21.9
Q ss_pred EEEEECCCCCEEEEECCCC-CC--CCEECCCCCEEEEEEEEC
Q ss_conf 9999889996799662787-55--437887899899999508
Q gi|254780548|r 373 IGVMKKDGSQERLLVEDSN-LQ--APTWSPSGRSLIFSRKKD 411 (447)
Q Consensus 373 i~~~~~~g~~~~~lt~~~~-~e--~P~wSPDG~~i~f~~~~~ 411 (447)
+-+.+...++.++...+.. .| .|+||||||.+...-++.
T Consensus 473 ~~~~~~~~g~~~rF~~~P~~~E~tG~~fsPD~~tlFvniQHP 514 (515)
T pfam05787 473 MLTEGPIRGEVKLFLTGPEGSEFTGPTFSPDGRTLFVNVQHP 514 (515)
T ss_pred EEECCCCCCEEEEECCCCCCCCCCCCEECCCCCEEEEEECCC
T ss_conf 451377766376603389985765634898998899992589
No 244
>pfam05643 DUF799 Putative bacterial lipoprotein (DUF799). This family consists of several bacterial proteins of unknown function. Some of the family members are described as putative lipoproteins.
Probab=91.61 E-value=0.59 Score=23.48 Aligned_cols=99 Identities=15% Similarity=0.175 Sum_probs=54.3
Q ss_pred CCCEEEEECCCCCCC---CHHHHHHHHHHHHHHCCCCEEECCHHHCC-----CCCCCCCCC--CCHHHHH-HCCCCEEEE
Q ss_conf 642004630567753---03578999999862017514550865503-----466761114--5778874-156218999
Q gi|254780548|r 45 YSPVSIAFTKFVSID---ELGGKVSEVVSKDLQRSDVFNLISQDSFK-----QKITNPDSI--PRFQDWN-SLGAQVLVT 113 (447)
Q Consensus 45 ~~pi~IAv~~f~~~~---~~~~~i~~ii~~DL~~SG~F~~i~~~~~~-----~~~~~~~~~--~~f~~W~-~~gad~lv~ 113 (447)
..|-.|-|.|..+.. +++..+-..+..=|...|+. +.|..... +...++..+ +.....+ .-|||.++.
T Consensus 33 skP~SILVlPpvN~S~dV~A~~~~ls~~t~PLAE~GYY-VfPVavV~etfk~nGl~~a~~i~~v~~~Kl~eiFGADAvLY 111 (215)
T pfam05643 33 SKPASILVVPPLNESPDVNGTWGMLASTAAPLSEAGYY-VFPAAVVEETFKQNGLTNAADIHAVRPEKLHQIFGNDAVLY 111 (215)
T ss_pred CCCCEEEEECCCCCCCCCCCCHHEEEEEHHHHHHCCEE-ECCHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHCCCEEEE
T ss_conf 69955998578899865366323132001005328637-62599999999975999989973599899998738776899
Q ss_pred EEEEECC--------CCEEEEEEEEECCCCCCEECCCCC
Q ss_conf 9974046--------622578999841555420000232
Q gi|254780548|r 114 GRVIKEG--------KDRLRVEFRLWDVKDRKQIIGKKF 144 (447)
Q Consensus 114 G~i~~~~--------~~~~~v~~~L~dv~~~~~i~~~~~ 144 (447)
-+|..-+ +..+.++++|.|..+|+.++..+-
T Consensus 112 vtI~~ygt~Y~VisS~t~V~~~a~LvdlrTG~~LW~g~a 150 (215)
T pfam05643 112 ITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSA 150 (215)
T ss_pred EEEECCCCEEEEEEEEEEEEEEEEEEECCCCCEEEEEEE
T ss_conf 871024737999962379999999984567867653103
No 245
>KOG4328 consensus
Probab=91.07 E-value=0.88 Score=22.32 Aligned_cols=78 Identities=17% Similarity=0.170 Sum_probs=31.6
Q ss_pred EEEEECCCCC-EEEEEEECCCCCCCCCEEEECCCC----CEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEC
Q ss_conf 3455768998-489985034676443037711797----17997437985244455158955677413787303899840
Q gi|254780548|r 215 FEPRFSPNQQ-KVAYATYDDEDILRVYLMDTRIDR----APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289 (447)
Q Consensus 215 ~sP~wSpDG~-~Iay~s~~~~~~~~i~~~~~~~g~----~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~ 289 (447)
.+-+|.|--. +++-+ +.+..+|-+.++.+.+ ...+-+.+.+....-.|+|....-+++++-||. |-.+|+
T Consensus 190 t~l~fHPt~~~~lva~---GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGt--iR~~D~ 264 (498)
T KOG4328 190 TSLAFHPTENRKLVAV---GDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGT--IRLQDF 264 (498)
T ss_pred EEEEECCCCCCEEEEE---CCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCEEECCCCHHHEEEECCCCE--EEEEEE
T ss_conf 7888635686118997---15777277876677777667548845677622343755798435565124761--566550
Q ss_pred CCCCCCCC
Q ss_conf 47741100
Q gi|254780548|r 290 QSNATERL 297 (447)
Q Consensus 290 ~~~~~~~l 297 (447)
+++..+.+
T Consensus 265 ~~~i~e~v 272 (498)
T KOG4328 265 EGNISEEV 272 (498)
T ss_pred CCHHHHHH
T ss_conf 31166787
No 246
>KOG0292 consensus
Probab=90.75 E-value=0.94 Score=22.13 Aligned_cols=190 Identities=18% Similarity=0.227 Sum_probs=85.4
Q ss_pred CCCCCHHHHHHCCCCEEEEEE--------EEECC----CCEEEEEEEEECCCCCC--EECCCCCCCCHHHHHHH---HHH
Q ss_conf 114577887415621899999--------74046----62257899984155542--00002323377788999---999
Q gi|254780548|r 95 DSIPRFQDWNSLGAQVLVTGR--------VIKEG----KDRLRVEFRLWDVKDRK--QIIGKKFFSSPASWRKI---AHT 157 (447)
Q Consensus 95 ~~~~~f~~W~~~gad~lv~G~--------i~~~~----~~~~~v~~~L~dv~~~~--~i~~~~~~~~~~~~R~~---ah~ 157 (447)
+..+...+|+..+-=.+++|. ..+.. ...+.-.+|+||+..-+ .+... +-.+++|.. +..
T Consensus 114 DQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg---~~e~~~~~~~~~~dL 190 (1202)
T KOG0292 114 DQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPG---SLEDQMRGQQGNSDL 190 (1202)
T ss_pred CCEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCEEEEECCCCEEEEEEECCHHCCCCCCC---CCHHHHHCCCCCHHH
T ss_conf 87699985257846899706750898510178520377721564489986003110478998---722232025354001
Q ss_pred HH--HHHHHHHC-C-CCCC----CC-CCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEE
Q ss_conf 98--99999750-4-4555----54-417887513676442100123114554026886217640234557689984899
Q gi|254780548|r 158 IS--DDIYQSIT-G-EKGD----FN-SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228 (447)
Q Consensus 158 ~a--d~i~~~lt-G-~~G~----f~-triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay 228 (447)
|- |.|++.+. | .+|+ |. |-=.+|| +.+.|.-.||-|.---.=..-..+++-..+.+--|.|....|.
T Consensus 191 fg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVS---G~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIl- 266 (1202)
T KOG0292 191 FGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVS---GADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLIL- 266 (1202)
T ss_pred CCCCCEEEEEECCCCCCCCCEEEECCCCCEEEE---CCCCCEEEEEEECCCCCEEEHHHHCCCCCCCEEEECCCCCEEE-
T ss_conf 378570424310066666524874588736884---4774324678723552011023425568854698627601467-
Q ss_pred EEECCCCCCCCCEEEECCCCCE--------EEEECCCCCEEEEEECCCCCEEEEEECCC-------C-------CEEEEE
Q ss_conf 8503467644303771179717--------99743798524445515895567741378-------7-------303899
Q gi|254780548|r 229 ATYDDEDILRVYLMDTRIDRAP--------KRIGNFRSMILAPRFSSNGKRALISVQKD-------E-------AMDIYS 286 (447)
Q Consensus 229 ~s~~~~~~~~i~~~~~~~g~~~--------~~~~~~~~~~~~p~wSPDG~~la~~~s~~-------g-------~~~I~~ 286 (447)
|-...+..+||-++-+++-.. =.++.+|.+|.-.+=+ |+.-++|-+.+. + ...|+.
T Consensus 267 -SnsEDksirVwDm~kRt~v~tfrrendRFW~laahP~lNLfAAgH-DsGm~VFkleRErpa~~v~~n~LfYvkd~~i~~ 344 (1202)
T KOG0292 267 -SNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPELNLFAAGH-DSGMIVFKLERERPAYAVNGNGLFYVKDRFIRS 344 (1202)
T ss_pred -ECCCCCCEEEEECCCCCCEEEEECCCCEEEEEEECCCCCEEEEEC-CCCEEEEEECCCCCEEEECCCEEEEECCCEEEE
T ss_conf -417876179870566632045640587189999648763455424-772499997056864898287789983425786
Q ss_pred EECCCCC
Q ss_conf 8404774
Q gi|254780548|r 287 VDLQSNA 293 (447)
Q Consensus 287 ~d~~~~~ 293 (447)
+|+.+.+
T Consensus 345 ~d~~t~~ 351 (1202)
T KOG0292 345 YDLRTQK 351 (1202)
T ss_pred EECCCCC
T ss_conf 5513334
No 247
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=90.52 E-value=0.98 Score=22.00 Aligned_cols=149 Identities=15% Similarity=0.130 Sum_probs=65.5
Q ss_pred EECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEE-----EEEECCCCCEEEEEECCCCCEEEEEEECCCC
Q ss_conf 57689984899850346764430377117971799743798524-----4455158955677413787303899840477
Q gi|254780548|r 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-----APRFSSNGKRALISVQKDEAMDIYSVDLQSN 292 (447)
Q Consensus 218 ~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~-----~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~ 292 (447)
-..|||+.+ |+- +++...||..+-+.=+.++++.+.+|..- +-..-..|..++.....++-++-|-+.-+++
T Consensus 227 lL~Pdg~~L-Yv~--~g~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWFdvr~~~~ 303 (733)
T COG4590 227 LLTPDGKTL-YVR--TGSELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWFDVRRDGQ 303 (733)
T ss_pred EECCCCCEE-EEE--CCCEEEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEECCCC
T ss_conf 788898789-996--18768887600365204445433998358899999998717616999868874002133204898
Q ss_pred CCCCCCCCCCCCCC--EEEECCCCEEEEEE-CCCCCCCEEEEEECCCCCCEEEEECCCC-EEEEEECCCCCEEEEEECCC
Q ss_conf 41100257764320--25521674789972-3776533157640256741112203530-00046877688899997149
Q gi|254780548|r 293 ATERLTNTLFINIS--ASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEAS-YFDPVWSPQGDLIAFTKFSG 368 (447)
Q Consensus 293 ~~~~lT~~~~~d~~--p~~spDG~~I~f~S-dr~G~~qiy~~~~~g~~~~rlT~~~~~~-~~~p~wSPdG~~Iaf~~~~~ 368 (447)
..-..+.+...+-+ ....|+.++-.|.+ +|.|.-|.|. +...+.+-++..+. -.-...||.+++++. .+.
T Consensus 304 p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~----st~~~~lL~~~~~~~~~~~~~Sp~~~~Ll~--e~~ 377 (733)
T COG4590 304 PHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFY----STSEKLLLFERAYQAPQLVAMSPNQAYLLS--EDQ 377 (733)
T ss_pred CCCEEEECCCCCCCCCEEECCCCCCCEEEEECCCCCEEEEE----CCCCCCEEHHHHHCCCCEEEECCCCCHHEE--ECC
T ss_conf 75110121445766200334656641379974798244454----046762000034147662655755203125--037
Q ss_pred CCEEEEE
Q ss_conf 9157999
Q gi|254780548|r 369 EKFAIGV 375 (447)
Q Consensus 369 ~~~~i~~ 375 (447)
|+.++|-
T Consensus 378 gki~~~~ 384 (733)
T COG4590 378 GKIRLAQ 384 (733)
T ss_pred CCEEEEE
T ss_conf 8368997
No 248
>PRK11067 outer membrane protein assembly factor YaeT; Provisional
Probab=90.42 E-value=0.57 Score=23.58 Aligned_cols=70 Identities=13% Similarity=0.124 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCEE--EEEEECCCCCCC--EEEEECCCCCCCCH-HHHHHHHHHHHHHCCCCEEEC
Q ss_conf 6799999999999998720213316--999971586642--00463056775303-578999999862017514550
Q gi|254780548|r 11 LNMKINLCLLLVLIGGFFPTSIHAF--VKVATNSANYSP--VSIAFTKFVSIDEL-GGKVSEVVSKDLQRSDVFNLI 82 (447)
Q Consensus 11 ~~m~~~l~l~l~l~~~~~~~~a~A~--~~i~It~~~~~p--i~IAv~~f~~~~~~-~~~i~~ii~~DL~~SG~F~~i 82 (447)
|+||+++|+++++.+.+. .++++. -.|.|.+-.... .-.+..+..-.+.+ .+.+++.|+ .|-.+|+|+=+
T Consensus 1 ~~~k~~~~~~~l~~~~~~-~~a~~~~I~~I~v~G~~ri~~~ti~~~l~~~~G~~~~~~~i~~~ik-~L~~tg~F~dV 75 (801)
T PRK11067 1 MAMKKLLIASLLFSSATV-YGAEGFVVKDIHFEGLQRVAVGAALLSMPVRVGDTVNDEDISNTIR-ALFATGNFEDV 75 (801)
T ss_pred CCHHHHHHHHHHHHHHHH-HHCCCEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHH-HHHHCCCCCEE
T ss_conf 975899999999999998-7558729979999897376988999646989999279899999999-99858995248
No 249
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=89.49 E-value=1.2 Score=21.46 Aligned_cols=54 Identities=17% Similarity=0.219 Sum_probs=28.8
Q ss_pred CHHHH-HHCCCCEEEE----EEEE---ECCCCEEEEEEEEECCCCCCEECCCCCCC-CHHHHH
Q ss_conf 77887-4156218999----9974---04662257899984155542000023233-777889
Q gi|254780548|r 99 RFQDW-NSLGAQVLVT----GRVI---KEGKDRLRVEFRLWDVKDRKQIIGKKFFS-SPASWR 152 (447)
Q Consensus 99 ~f~~W-~~~gad~lv~----G~i~---~~~~~~~~v~~~L~dv~~~~~i~~~~~~~-~~~~~R 152 (447)
+|..| +.+++..+++ |++- ...+|++.+.++.|+-..|=-+-+.+... ...++.
T Consensus 8 ~f~~~L~~~~~Sl~~sTYqagkl~~ig~~~~g~l~~~~r~F~rpMGL~~~~~~L~v~t~~qiw 70 (335)
T TIGR03032 8 QFAQWLAELKLSLAVTTYQAGKLFFIGLQPNGELDVFERTFPRPMGLAVSPQSLTLGTRYQLW 70 (335)
T ss_pred CHHHHHHHCCCEEEEEEEECCEEEEEEECCCCCEEEEEEECCCCCEEEEECCEEEEEEHHEEE
T ss_conf 679999867937999943557599998689996888765268650651629979998704014
No 250
>KOG0267 consensus
Probab=87.52 E-value=0.75 Score=22.76 Aligned_cols=57 Identities=19% Similarity=0.181 Sum_probs=27.1
Q ss_pred EEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCC---CCEEEEEECCC
Q ss_conf 88621764023455768998489985034676443037711797179974379---85244455158
Q gi|254780548|r 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAPRFSSN 268 (447)
Q Consensus 205 ~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~---~~~~~p~wSPD 268 (447)
...++.-..+-.-+++|||++++ + ++....+-+.|+..| +.+..|+ +.+.++.|.|-
T Consensus 148 ~~~~s~~~vv~~l~lsP~Gr~v~--~--g~ed~tvki~d~~ag---k~~~ef~~~e~~v~sle~hp~ 207 (825)
T KOG0267 148 HTYKSHTRVVDVLRLSPDGRWVA--S--GGEDNTVKIWDLTAG---KLSKEFKSHEGKVQSLEFHPL 207 (825)
T ss_pred EEECCCCCEEEEEEECCCCCEEE--C--CCCCCEEEEECCCCC---CCCCCCCCCCCCCCCCCCCCH
T ss_conf 45058763257775369970661--0--688654562034432---002225666555101346823
No 251
>KOG1007 consensus
Probab=87.01 E-value=1.7 Score=20.43 Aligned_cols=221 Identities=14% Similarity=0.209 Sum_probs=99.7
Q ss_pred EEECCCC-CCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE--ECCCC-CCCCEEEEEECCCCC--E
Q ss_conf 9841555-4200002323377788999999989999975044555544178875--13676-442100123114554--0
Q gi|254780548|r 129 RLWDVKD-RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS--ESVVS-GIIKNSLCVMDRDGA--N 202 (447)
Q Consensus 129 ~L~dv~~-~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~f~triafv~--~~~~~-~~~~~~l~i~d~DG~--n 202 (447)
.|.+... +..+..|.|.-.....+.++- -+|+.||.=-. .+++. .-..-.||-+.-+-. |
T Consensus 43 hll~~d~e~s~l~skvf~h~agEvw~las--------------~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~ 108 (370)
T KOG1007 43 HLLRLDSEGSELLSKVFFHHAGEVWDLAS--------------SPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSN 108 (370)
T ss_pred EEEEECCCCCHHHHHHHHCCCCCEEHHHC--------------CCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCCC
T ss_conf 79986676561445333137752011222--------------9888752788873147776323578983565557665
Q ss_pred EEEE-------EECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCC-EEEEECC-----CCCEEEEEECC--
Q ss_conf 2688-------6217640234557689984899850346764430377117971-7997437-----98524445515--
Q gi|254780548|r 203 IRYL-------TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA-PKRIGNF-----RSMILAPRFSS-- 267 (447)
Q Consensus 203 ~~~l-------~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~-~~~~~~~-----~~~~~~p~wSP-- 267 (447)
..+| |..-+. +..-.|-||+.++|-+. + .+|-+.++..+.. ...+... .-.-.+.+|||
T Consensus 109 ~~tlE~v~~Ldteavg~-i~cvew~Pns~klasm~--d---n~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHH 182 (370)
T KOG1007 109 SSTLECVASLDTEAVGK-INCVEWEPNSDKLASMD--D---NNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHH 182 (370)
T ss_pred CCHHHHHHCCCHHHHCC-EEEEEECCCCCEEEEEC--C---CCEEEEECCCCCCHHEEECCCCCCCCCCEECCCCCCCCC
T ss_conf 53166755288788284-42599748977367751--6---716999735685222022266344554003145447777
Q ss_pred CCCEEEEEECCCCCEEEEEEECCCCCC-CCCCCCCC-CCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEC
Q ss_conf 895567741378730389984047741-10025776-4320255216747899723776533157640256741112203
Q gi|254780548|r 268 NGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLF-INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345 (447)
Q Consensus 268 DG~~la~~~s~~g~~~I~~~d~~~~~~-~~lT~~~~-~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~ 345 (447)
||..++.+. ++ .|+-.|+.+-.. -.+-+..+ ....--|.|+-+.+.-+.+..|.-.||-.......++.|....
T Consensus 183 dgnqv~tt~--d~--tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~Hs 258 (370)
T KOG1007 183 DGNQVATTS--DS--TLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHS 258 (370)
T ss_pred CCCEEEEEC--CC--CEEEEECCCHHHHCCHHHHHCCEEEECCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCC
T ss_conf 654688717--88--37888712434421244432126640457988227999717876079875367776431168885
Q ss_pred CCCEEEEEECCCCCEEEEEECCCCCEEEE
Q ss_conf 53000046877688899997149915799
Q gi|254780548|r 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIG 374 (447)
Q Consensus 346 ~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~ 374 (447)
.+ .....+-|--+.++.+...+..-.+.
T Consensus 259 HW-vW~VRfn~~hdqLiLs~~SDs~V~Ls 286 (370)
T KOG1007 259 HW-VWAVRFNPEHDQLILSGGSDSAVNLS 286 (370)
T ss_pred EE-EEEEEECCCCCEEEEECCCCCEEEEE
T ss_conf 37-99987267520378834777316787
No 252
>KOG0316 consensus
Probab=86.70 E-value=1.7 Score=20.32 Aligned_cols=210 Identities=18% Similarity=0.174 Sum_probs=86.1
Q ss_pred EEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEECC-CCCEEEE
Q ss_conf 999841555420000232337778899999998999997504455554417887513676442100123114-5540268
Q gi|254780548|r 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRY 205 (447)
Q Consensus 127 ~~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~f~triafv~~~~~~~~~~~~l~i~d~-DG~n~~~ 205 (447)
..+||++.+|..| |.|.+.-...+.++ .. .-+++++ +. .+. +.+.+-|. -|.-.|.
T Consensus 40 tvrLWNp~rg~li--ktYsghG~EVlD~~-~s-------------~Dnskf~----s~-GgD--k~v~vwDV~TGkv~Rr 96 (307)
T KOG0316 40 TVRLWNPLRGALI--KTYSGHGHEVLDAA-LS-------------SDNSKFA----SC-GGD--KAVQVWDVNTGKVDRR 96 (307)
T ss_pred EEEEECCCCCCEE--EEECCCCCEEEECC-CC-------------CCCCCCC----CC-CCC--CEEEEEECCCCEEEEE
T ss_conf 6884246565035--65357880444401-14-------------4663000----47-887--2699997236733410
Q ss_pred EEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECC--CCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEE
Q ss_conf 86217640234557689984899850346764430377117--9717997437985244455158955677413787303
Q gi|254780548|r 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI--DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283 (447)
Q Consensus 206 l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~--g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~ 283 (447)
+ +++..-+.+-+|.-+..-|+=-|+. ..+-.+|-++ -+..+.+..+....++...+ ++..++.+.||+-.
T Consensus 97 ~-rgH~aqVNtV~fNeesSVv~SgsfD----~s~r~wDCRS~s~ePiQildea~D~V~Si~v~---~heIvaGS~DGtvR 168 (307)
T KOG0316 97 F-RGHLAQVNTVRFNEESSVVASGSFD----SSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA---EHEIVAGSVDGTVR 168 (307)
T ss_pred C-CCCCCEEEEEEECCCCEEEEECCCC----CEEEEEECCCCCCCCCCHHHHHCCCEEEEEEC---CCEEEEECCCCCEE
T ss_conf 2-3654224579965753089953446----41688872368987101254423742589842---63798621477179
Q ss_pred EEEEECCCCCCCCCCCCC--CCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEE---EEEECCCC
Q ss_conf 899840477411002577--6432025521674789972377653315764025674111220353000---04687768
Q gi|254780548|r 284 IYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF---DPVWSPQG 358 (447)
Q Consensus 284 I~~~d~~~~~~~~lT~~~--~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~---~p~wSPdG 358 (447)
-| |+.-|++ +... ..-++.++||||+-..-.+ -++ -|-.+|-++|+.-+. +-|..|.. .-.++ ..
T Consensus 169 ty--diR~G~l---~sDy~g~pit~vs~s~d~nc~La~~-l~s--tlrLlDk~tGklL~s-YkGhkn~eykldc~l~-qs 238 (307)
T KOG0316 169 TY--DIRKGTL---SSDYFGHPITSVSFSKDGNCSLASS-LDS--TLRLLDKETGKLLKS-YKGHKNMEYKLDCCLN-QS 238 (307)
T ss_pred EE--EEECCEE---EHHHCCCCCEEEEECCCCCEEEEEE-CCC--EEEECCCCHHHHHHH-HCCCCCCEEEEEEEEC-CC
T ss_conf 88--8632514---1422489600588638887798862-365--456410325578887-5063562465301103-56
Q ss_pred CEEEEEECCCCCEEEEEEECC
Q ss_conf 889999714991579999889
Q gi|254780548|r 359 DLIAFTKFSGEKFAIGVMKKD 379 (447)
Q Consensus 359 ~~Iaf~~~~~~~~~i~~~~~~ 379 (447)
+.++|+..++|. +|.+++.
T Consensus 239 dthV~sgSEDG~--Vy~wdLv 257 (307)
T KOG0316 239 DTHVFSGSEDGK--VYFWDLV 257 (307)
T ss_pred CEEEEECCCCCE--EEEEEEC
T ss_conf 406872167856--9999903
No 253
>pfam05567 Neisseria_PilC Neisseria PilC protein. This family consists of several PilC protein sequences from Neisseria gonorrhoeae and N. meningitidis. PilC is a phase-variable protein associated with pilus-mediated adherence of pathogenic Neisseria to target cells.
Probab=86.58 E-value=1.8 Score=20.28 Aligned_cols=92 Identities=24% Similarity=0.301 Sum_probs=45.4
Q ss_pred CCCCEEEEEEC---------CCCCEEEEEEECCCCC---CCCCC--CCCCCCCCEEEE---CCCC-EEEEEECCCCCCCE
Q ss_conf 58955677413---------7873038998404774---11002--577643202552---1674-78997237765331
Q gi|254780548|r 267 SNGKRALISVQ---------KDEAMDIYSVDLQSNA---TERLT--NTLFINISASYS---PDSS-QIVFESDREGKEQL 328 (447)
Q Consensus 267 PDG~~la~~~s---------~~g~~~I~~~d~~~~~---~~~lT--~~~~~d~~p~~s---pDG~-~I~f~Sdr~G~~qi 328 (447)
-+|+.-+|..+ .+..+-||++|+.+.. +++|. .+.+--.+|+.- -||- -|+|.-||+|+ +
T Consensus 670 ~ngkYaaFLAsGYa~k~i~s~~NkTALYVYDl~~~~G~lI~KI~V~~GkGGLSSPTLVD~DlDGtVDIAYAGDRGGN--M 747 (1039)
T pfam05567 670 HNGKYAAFLASGYATKDITSGDNKTALYVYDLESNLGTLIKKIEVPGGKGGLSSPTLVDKDLDGTVDIAYAGDRGGN--M 747 (1039)
T ss_pred CCCCEEEEEECCCEECCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCEEEEEEECCCCCC--E
T ss_conf 47626665405612023467888436999974888887778987278866667872551357743788752267773--7
Q ss_pred EEEEECCCCCCEEE----EECCC-CEEEEEECCCCCE
Q ss_conf 57640256741112----20353-0000468776888
Q gi|254780548|r 329 YVMQSNGSDQKRIS----QDKEA-SYFDPVWSPQGDL 360 (447)
Q Consensus 329 y~~~~~g~~~~rlT----~~~~~-~~~~p~wSPdG~~ 360 (447)
|+.|+.+.++..-+ |.+.. -.+.|+.|-..++
T Consensus 748 YRFDLs~~~ps~Wsv~~If~GtKPITSAPAVSrl~dK 784 (1039)
T pfam05567 748 YRFDLSGNNPNKWSVRTIFEGTKPITSAPAVSRLKDK 784 (1039)
T ss_pred EEEECCCCCCCCCEEEEEEECCCCCCCCCHHHHCCCC
T ss_conf 8887689996665689887079765445101202771
No 254
>KOG4532 consensus
Probab=86.57 E-value=1.8 Score=20.27 Aligned_cols=67 Identities=16% Similarity=0.110 Sum_probs=24.6
Q ss_pred EEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCC-EEE--EECCCCCEEEEEECCCCCEEEEEECCCCCEEEEE
Q ss_conf 34557689984899850346764430377117971-799--7437985244455158955677413787303899
Q gi|254780548|r 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA-PKR--IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286 (447)
Q Consensus 215 ~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~-~~~--~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~ 286 (447)
.+...|||++..+-| ++..+|+.+.+....+ ... +++.....+.-+||......|. ..+||..-||-
T Consensus 162 ns~~~snd~~~~~~V----gds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv-~~Qdg~~~I~D 231 (344)
T KOG4532 162 NSLHYSNDPSWGSSV----GDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAV-VFQDGTCAIYD 231 (344)
T ss_pred EEEEECCCCCEEEEE----CCCCCCEEEEECCCCCEEEEEEECCCCCCCEEEEECCCCCEEEE-EECCCCEEEEE
T ss_conf 026775998627772----58775137970784121034675456778646641368612789-96377089997
No 255
>KOG4547 consensus
Probab=86.53 E-value=1.8 Score=20.26 Aligned_cols=148 Identities=14% Similarity=0.219 Sum_probs=73.5
Q ss_pred HCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCEEC----CCCCCCCHHH-H-HHHHHHHHHHHHHHHCCCCCCCCCCEE
Q ss_conf 156218999997404662257899984155542000----0232337778-8-999999989999975044555544178
Q gi|254780548|r 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII----GKKFFSSPAS-W-RKIAHTISDDIYQSITGEKGDFNSRIL 178 (447)
Q Consensus 105 ~~gad~lv~G~i~~~~~~~~~v~~~L~dv~~~~~i~----~~~~~~~~~~-~-R~~ah~~ad~i~~~ltG~~G~f~tria 178 (447)
..+...+|.|.. + -++.+|++..|+.-. ++.|...... + -++.|. | .+.++-|+.
T Consensus 67 s~~t~~lvlgt~----~----g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ci-----y------S~~ad~~v~ 127 (541)
T KOG4547 67 SLDTSMLVLGTP----Q----GSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCI-----Y------SVGADLKVV 127 (541)
T ss_pred CCCCEEEEEECC----C----CCEEEEEECCCEEEEEEECCCCCCCCEEEECCCCCCCE-----E------ECCCCEEEE
T ss_conf 378259995058----7----52899871277479997358777751055326555726-----8------517843699
Q ss_pred EEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCC
Q ss_conf 87513676442100123114554026886217640234557689984899850346764430377117971799743798
Q gi|254780548|r 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258 (447)
Q Consensus 179 fv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~ 258 (447)
|+.+... ...++| +.....+.|-+.||||+.++-.| .+|-++++.+++....-+.+.+
T Consensus 128 ~~~~~~~---~~~~~~-------------~~~~~~~~sl~is~D~~~l~~as------~~ik~~~~~~kevv~~ftgh~s 185 (541)
T KOG4547 128 YILEKEK---VIIRIW-------------KEQKPLVSSLCISPDGKILLTAS------RQIKVLDIETKEVVITFTGHGS 185 (541)
T ss_pred EEECCCC---EEEEEE-------------CCCCCCCCEEEECCCCCEEEECC------CEEEEEECCCCEEEEEECCCCC
T ss_conf 9731223---166653-------------04787511079858877788613------2589997157448998358886
Q ss_pred CEEEEEECCC-----CCEEEEEECCCCCEEEEEEECCCCC
Q ss_conf 5244455158-----9556774137873038998404774
Q gi|254780548|r 259 MILAPRFSSN-----GKRALISVQKDEAMDIYSVDLQSNA 293 (447)
Q Consensus 259 ~~~~p~wSPD-----G~~la~~~s~~g~~~I~~~d~~~~~ 293 (447)
...+-+|-.+ |++++-+...+-...+|+.+-+.++
T Consensus 186 ~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~~~kk 225 (541)
T KOG4547 186 PVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEKEDKK 225 (541)
T ss_pred CEEEEEEEEECCCCCCCEEEECCCCCCCEEEEEEECCCCC
T ss_conf 3378999982156544245531310045047999715563
No 256
>KOG0300 consensus
Probab=86.27 E-value=1.8 Score=20.17 Aligned_cols=63 Identities=17% Similarity=0.291 Sum_probs=26.2
Q ss_pred CEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCC-CCCCCCCCCCEEEECCCCEEEEEECCCCC
Q ss_conf 52444551589556774137873038998404774110-02577643202552167478997237765
Q gi|254780548|r 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGK 325 (447)
Q Consensus 259 ~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~-lT~~~~~d~~p~~spDG~~I~f~Sdr~G~ 325 (447)
...+..|-..|++++ +.+.|-..++| |+++|.+.+ ||.+...-+.-+-.|. ++++.+|.|.-.
T Consensus 274 vV~a~dWL~gg~Q~v-TaSWDRTAnlw--DVEtge~v~~LtGHd~ELtHcstHpt-QrLVvTsSrDtT 337 (481)
T KOG0300 274 VVSACDWLAGGQQMV-TASWDRTANLW--DVETGEVVNILTGHDSELTHCSTHPT-QRLVVTSSRDTT 337 (481)
T ss_pred CEEEHHHHCCCCEEE-EEECCCCCEEE--EECCCCEECCCCCCCHHCCCCCCCCC-CEEEEEECCCCE
T ss_conf 067124450752246-54313320244--40157251125576121021236886-358998336752
No 257
>KOG0974 consensus
Probab=85.61 E-value=2 Score=19.96 Aligned_cols=19 Identities=16% Similarity=0.179 Sum_probs=7.8
Q ss_pred CCCCCEEEEEECCCCCEEE
Q ss_conf 1764023455768998489
Q gi|254780548|r 209 SRDQILFEPRFSPNQQKVA 227 (447)
Q Consensus 209 ~~~~~~~sP~wSpDG~~Ia 227 (447)
+++...+++.||-||.+|+
T Consensus 173 GHeG~iF~i~~s~dg~~i~ 191 (967)
T KOG0974 173 GHEGSIFSIVTSLDGRYIA 191 (967)
T ss_pred CCCCCEEEEEECCCCCEEE
T ss_conf 5678458899805885899
No 258
>KOG2281 consensus
Probab=84.73 E-value=2.2 Score=19.69 Aligned_cols=19 Identities=16% Similarity=0.099 Sum_probs=8.4
Q ss_pred EEEEEEECC-CCCEEEEECC
Q ss_conf 579999889-9967996627
Q gi|254780548|r 371 FAIGVMKKD-GSQERLLVED 389 (447)
Q Consensus 371 ~~i~~~~~~-g~~~~~lt~~ 389 (447)
.+||+.... .++..+||+-
T Consensus 530 ~hLyvvsye~~g~~~rlt~~ 549 (867)
T KOG2281 530 HHLYVVSYENPGEIARLTEP 549 (867)
T ss_pred EEEEEEEECCCCCEEECCCC
T ss_conf 36899996067855650478
No 259
>KOG0308 consensus
Probab=84.06 E-value=2.3 Score=19.50 Aligned_cols=109 Identities=13% Similarity=0.283 Sum_probs=52.0
Q ss_pred EEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCC
Q ss_conf 34557689984899850346764430377117971799743798524445515895567741378730389984047741
Q gi|254780548|r 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294 (447)
Q Consensus 215 ~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~ 294 (447)
+|-+-.|.|.-| ++ ++-...|-++|.+++.+.-.+-.+....-.-..++||++++ +.+-||...+|-+. +.
T Consensus 175 YSLA~N~t~t~i--vs--Ggtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~l-s~sSDgtIrlWdLg----qQ 245 (735)
T KOG0308 175 YSLAMNQTGTII--VS--GGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLL-SASSDGTIRLWDLG----QQ 245 (735)
T ss_pred EEEECCCCCEEE--EE--CCCCCCEEEECCCCCCCEEEEECCCCCEEEEEECCCCCEEE-ECCCCCEEEEEECC----CC
T ss_conf 564017862499--82--67544259964643221134442556448999848988576-13788437852066----41
Q ss_pred CCCCCCCCCCCCEEEE----CCCCEEEEEECCCCCCCEEEEEECCC
Q ss_conf 1002577643202552----16747899723776533157640256
Q gi|254780548|r 295 ERLTNTLFINISASYS----PDSSQIVFESDREGKEQLYVMQSNGS 336 (447)
Q Consensus 295 ~~lT~~~~~d~~p~~s----pDG~~I~f~Sdr~G~~qiy~~~~~g~ 336 (447)
+-++.-.. -.+..|+ |+=+. +|..+|.|. ||+.++..-
T Consensus 246 rCl~T~~v-H~e~VWaL~~~~sf~~-vYsG~rd~~--i~~Tdl~n~ 287 (735)
T KOG0308 246 RCLATYIV-HKEGVWALQSSPSFTH-VYSGGRDGN--IYRTDLRNP 287 (735)
T ss_pred CEEEEEEE-CCCCEEEEEECCCCCE-EEECCCCCC--EEECCCCCC
T ss_conf 01205784-4673689860787216-886688775--796115783
No 260
>pfam03088 Str_synth Strictosidine synthase. Strictosidine synthase (E.C. 4.3.3.2) is a key enzyme in alkaloid biosynthesis. It catalyses the condensation of tryptamine with secologanin to form strictosidine.
Probab=83.72 E-value=2.4 Score=19.41 Aligned_cols=36 Identities=17% Similarity=0.255 Sum_probs=20.5
Q ss_pred EEEEEECCCCCEEEEECCC-CCCCCEECCCCCEEEEE
Q ss_conf 7999988999679966278-75543788789989999
Q gi|254780548|r 372 AIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFS 407 (447)
Q Consensus 372 ~i~~~~~~g~~~~~lt~~~-~~e~P~wSPDG~~i~f~ 407 (447)
.+..+|+.+++.+.|-++- .--....|||+++++++
T Consensus 38 RLl~ydp~t~~~~vL~~~L~f~NGVals~D~~~vlv~ 74 (89)
T pfam03088 38 RLMKYDPSTKVTKVLLKDLYFPNGIALSPDGSFVLFC 74 (89)
T ss_pred EEEEEECCCCEEEEEECCCCCCCEEEECCCCCEEEEE
T ss_conf 3999959999489942188547617987899999999
No 261
>KOG0302 consensus
Probab=83.53 E-value=2.4 Score=19.36 Aligned_cols=28 Identities=18% Similarity=0.376 Sum_probs=12.8
Q ss_pred EEEEEEEEECCC-CEEEEEEEEECCCCCCE
Q ss_conf 899999740466-22578999841555420
Q gi|254780548|r 110 VLVTGRVIKEGK-DRLRVEFRLWDVKDRKQ 138 (447)
Q Consensus 110 ~lv~G~i~~~~~-~~~~v~~~L~dv~~~~~ 138 (447)
|+|.|....... +.+ +-+++.++...+.
T Consensus 94 Ylv~gtQa~~~~~N~l-~vlkl~nl~~t~~ 122 (440)
T KOG0302 94 YLVAGTQALDAPDNEL-MVLKLSNLHKTRN 122 (440)
T ss_pred HHHHHHHCCCCCCCCE-EEEEEEEEECCCC
T ss_conf 4122011155666716-7997322201337
No 262
>KOG0641 consensus
Probab=83.10 E-value=2.5 Score=19.25 Aligned_cols=205 Identities=16% Similarity=0.194 Sum_probs=96.5
Q ss_pred CCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECC----CCCEEEEECCCCCEEEEEECC---CCCEEEEEECCCCC
Q ss_conf 17640234557689984899850346764430377117----971799743798524445515---89556774137873
Q gi|254780548|r 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSS---NGKRALISVQKDEA 281 (447)
Q Consensus 209 ~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~----g~~~~~~~~~~~~~~~p~wSP---DG~~la~~~s~~g~ 281 (447)
.+++| +-.+|||+|+-||--| +.+..++.-++..+ |-..+ +.-++|..-.-.|-- .|..|+ .+...|.
T Consensus 88 hkgsi-yc~~ws~~geliatgs--ndk~ik~l~fn~dt~~~~g~dle-~nmhdgtirdl~fld~~~s~~~il-~s~gagd 162 (350)
T KOG0641 88 HKGSI-YCTAWSPCGELIATGS--NDKTIKVLPFNADTCNATGHDLE-FNMHDGTIRDLAFLDDPESGGAIL-ASAGAGD 162 (350)
T ss_pred CCCCE-EEEEECCCCCEEEECC--CCCEEEEEECCCCCCCCCCCCEE-EEECCCCEEEEEEECCCCCCCEEE-EECCCCC
T ss_conf 67657-9998668657577158--98548997525400235576505-650588324457741887685289-7158876
Q ss_pred EEEEEEECCCCCCC-CCCCCCCCCCCEEEECCCCEEEEEECCCCCCC--EEEEEECCC-CCCEE--EEECCC----CEEE
Q ss_conf 03899840477411-00257764320255216747899723776533--157640256-74111--220353----0000
Q gi|254780548|r 282 MDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQ--LYVMQSNGS-DQKRI--SQDKEA----SYFD 351 (447)
Q Consensus 282 ~~I~~~d~~~~~~~-~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~q--iy~~~~~g~-~~~rl--T~~~~~----~~~~ 351 (447)
..||..|-..|+.- .+..+.+- .-.-||-.|-.+ +| |++. |--.|+.-. -++.| ++.+.+ ....
T Consensus 163 c~iy~tdc~~g~~~~a~sghtgh-ilalyswn~~m~--~s---gsqdktirfwdlrv~~~v~~l~~~~~~~glessavaa 236 (350)
T KOG0641 163 CKIYITDCGRGQGFHALSGHTGH-ILALYSWNGAMF--AS---GSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAA 236 (350)
T ss_pred CEEEEEECCCCCCCEEECCCCCC-EEEEEEECCCEE--EC---CCCCCEEEEEEEECCCEEEECCCCCCCCCCCCCEEEE
T ss_conf 35998526899752130477653-899988547178--72---5887348988631252555136754478712312589
Q ss_pred EEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEC--CCCCCCCEECCCCCEEEEEEEECCCCCEEEEEEECCCCCEE
Q ss_conf 4687768889999714991579999889996799662--78755437887899899999508987337999988997147
Q gi|254780548|r 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429 (447)
Q Consensus 352 p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~--~~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~~~ 429 (447)
....|.|+.++ +...+.. -.++|+.|+...|-.. ........|||--.+++- -..+ . +|-+.|+-|.-..
T Consensus 237 v~vdpsgrll~-sg~~dss--c~lydirg~r~iq~f~phsadir~vrfsp~a~yllt-~syd--~--~ikltdlqgdla~ 308 (350)
T KOG0641 237 VAVDPSGRLLA-SGHADSS--CMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLT-CSYD--M--KIKLTDLQGDLAH 308 (350)
T ss_pred EEECCCCCEEE-ECCCCCC--EEEEEEECCCEEEEECCCCCCEEEEEECCCCEEEEE-ECCC--C--EEEEEECCCCHHH
T ss_conf 99888764665-0567871--589981189051343798652468981798349997-2035--4--4787422550220
Q ss_pred ECC
Q ss_conf 336
Q gi|254780548|r 430 LIN 432 (447)
Q Consensus 430 ~~~ 432 (447)
.++
T Consensus 309 el~ 311 (350)
T KOG0641 309 ELP 311 (350)
T ss_pred CCC
T ss_conf 075
No 263
>KOG0322 consensus
Probab=82.89 E-value=1.9 Score=20.02 Aligned_cols=75 Identities=12% Similarity=0.162 Sum_probs=36.1
Q ss_pred EEEEEECCC-----CCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEC-CCCCCCCEECCCC
Q ss_conf 157640256-----7411122035300004687768889999714991579999889996799662-7875543788789
Q gi|254780548|r 328 LYVMQSNGS-----DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSG 401 (447)
Q Consensus 328 iy~~~~~g~-----~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~-~~~~e~P~wSPDG 401 (447)
.|.++-+.+ ....|+..|. .....-||++-+| +..=+++..+|.+. .....-.|+- .......+||||-
T Consensus 231 ~~Sl~~s~gslq~~~e~~lknpGv---~gvrIRpD~KIlA-TAGWD~RiRVyswr-tl~pLAVLkyHsagvn~vAfspd~ 305 (323)
T KOG0322 231 MYSLNHSTGSLQIRKEITLKNPGV---SGVRIRPDGKILA-TAGWDHRIRVYSWR-TLNPLAVLKYHSAGVNAVAFSPDC 305 (323)
T ss_pred EEEECCCCCCCCCCCEEEECCCCC---CCEEECCCCCEEE-ECCCCCCEEEEEEC-CCCCHHHHHHHHCCEEEEEECCCC
T ss_conf 554013567531264688547884---6518745873776-33567737898722-578120121300630378857997
Q ss_pred CEEEEE
Q ss_conf 989999
Q gi|254780548|r 402 RSLIFS 407 (447)
Q Consensus 402 ~~i~f~ 407 (447)
.-++-+
T Consensus 306 ~lmAaa 311 (323)
T KOG0322 306 ELMAAA 311 (323)
T ss_pred CHHHHC
T ss_conf 244302
No 264
>TIGR03431 PhnD phosphonate ABC transporter, periplasmic phosphonate binding protein. Note that this model does not identify all phnD-subfamily genes with evident phosphonate context, but all sequences above the trusted context may be inferred to bind phosphonate compounds even in the absence of such context. Furthermore, there is ample evidence to suggest that many other members of the TIGR01098 subfamily have a different primary function.
Probab=82.48 E-value=2.2 Score=19.62 Aligned_cols=57 Identities=11% Similarity=0.090 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCHHHH---HHHHHHHHHHCC
Q ss_conf 79999999999999872021331699997158664200463056775303578---999999862017
Q gi|254780548|r 12 NMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGK---VSEVVSKDLQRS 76 (447)
Q Consensus 12 ~m~~~l~l~l~l~~~~~~~~a~A~~~i~It~~~~~pi~IAv~~f~~~~~~~~~---i~~ii~~DL~~S 76 (447)
|||.+|++++++++ +++.++.|+- ...++.+++.|.++...+-++ +.+-+..-|...
T Consensus 1 m~~r~l~~~~~~~~-~~~~~a~a~~-------~p~~l~~gv~P~~~~~~~~~~~~Pl~~yL~~~lg~~ 60 (288)
T TIGR03431 1 MLRRLILSLVAAFM-LISSNAQAED-------WPKELNFGIIPTENASDLKQRWEPLADYLSKKLGVK 60 (288)
T ss_pred CCHHHHHHHHHHHH-HHCCHHHHCC-------CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 90889999999999-9743224304-------883689998069999999999999999999987897
No 265
>cd00861 ProRS_anticodon_short ProRS Prolyl-anticodon binding domain, short version found predominantly in bacteria. ProRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=81.70 E-value=2.8 Score=18.91 Aligned_cols=73 Identities=15% Similarity=0.229 Sum_probs=44.8
Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEEECCCCEEEE
Q ss_conf 20046305677530357899999986201751455086550346676111457788741562189999974046622578
Q gi|254780548|r 47 PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126 (447)
Q Consensus 47 pi~IAv~~f~~~~~~~~~i~~ii~~DL~~SG~F~~i~~~~~~~~~~~~~~~~~f~~W~~~gad~lv~G~i~~~~~~~~~v 126 (447)
|+.|+|.|....+..-.+.++-|.+.|...|.=-.++... ..-. ..|.+|..+|+.+.+.-.-....+|.+.+
T Consensus 1 P~qv~Iipi~~~~~~~~~~a~~l~~~L~~~gi~v~~Ddr~------~~~G-~K~~~ael~GiP~~iiiG~k~~~~~~v~v 73 (94)
T cd00861 1 PFDVVIIPMNMKDEVQQELAEKLYAELQAAGVDVLLDDRN------ERPG-VKFADADLIGIPYRIVVGKKSAAEGIVEI 73 (94)
T ss_pred CEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEECCC------CHHH-HHHHHHHHCCCCEEEEECCCCHHCCEEEE
T ss_conf 9499999748998899999999999998879899998799------7277-99999997499879999066211799999
No 266
>COG4247 Phy 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) [Lipid metabolism]
Probab=81.64 E-value=2.8 Score=18.90 Aligned_cols=12 Identities=33% Similarity=0.706 Sum_probs=6.3
Q ss_pred EEEECCCCCCEEC
Q ss_conf 9984155542000
Q gi|254780548|r 128 FRLWDVKDRKQII 140 (447)
Q Consensus 128 ~~L~dv~~~~~i~ 140 (447)
+++||. +||++-
T Consensus 79 l~VYDL-sGkqLq 90 (364)
T COG4247 79 LRVYDL-SGKQLQ 90 (364)
T ss_pred EEEEEC-CCCEEE
T ss_conf 699956-877310
No 267
>PRK12325 prolyl-tRNA synthetase; Provisional
Probab=80.78 E-value=3 Score=18.70 Aligned_cols=47 Identities=6% Similarity=0.191 Sum_probs=27.5
Q ss_pred CCCCCCEEEEECCCCCCC-CHHHHHHHHHHHHHHCCCCEEECCHHHCC
Q ss_conf 586642004630567753-03578999999862017514550865503
Q gi|254780548|r 42 SANYSPVSIAFTKFVSID-ELGGKVSEVVSKDLQRSDVFNLISQDSFK 88 (447)
Q Consensus 42 ~~~~~pi~IAv~~f~~~~-~~~~~i~~ii~~DL~~SG~F~~i~~~~~~ 88 (447)
.|-+.+..=.++-|-..+ .+-+.|.++++.-+.+.|+-++.-|...+
T Consensus 29 ~g~i~~~~~Gl~~wlP~G~~i~~~le~~ir~e~~~~G~~eV~tP~l~~ 76 (438)
T PRK12325 29 AGMIRQQAAGIYSWLPLGLKVLKKIENIVREEQNRAGAIEILMPTIQP 76 (438)
T ss_pred CCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCC
T ss_conf 077563468732216058999999999999999974997998776587
No 268
>pfam04841 Vps16_N Vps16, N-terminal region. This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport. The role of VPS16 in this complex is not known.
Probab=80.22 E-value=3.2 Score=18.58 Aligned_cols=21 Identities=14% Similarity=0.200 Sum_probs=12.6
Q ss_pred CEEEEEECCCCCEEEEEECCC
Q ss_conf 000046877688899997149
Q gi|254780548|r 348 SYFDPVWSPQGDLIAFTKFSG 368 (447)
Q Consensus 348 ~~~~p~wSPdG~~Iaf~~~~~ 368 (447)
.+...+.||+|+.||+-...+
T Consensus 216 ~~~~~avSpng~~lAl~t~~g 236 (408)
T pfam04841 216 KWHKISVSDNRRHLALYTMTG 236 (408)
T ss_pred CEEEEEECCCCCEEEEEECCC
T ss_conf 846999978998799997899
No 269
>PRK11906 transcriptional regulator; Provisional
Probab=80.21 E-value=3.2 Score=18.58 Aligned_cols=123 Identities=17% Similarity=0.134 Sum_probs=74.1
Q ss_pred EEECCCCCCCEEEEECCCCCC-CCH-HHHHHHHHHHHHHCCCCE--EECCHHHCCCCCCCCCCCCCHHHHHHCCCCEEEE
Q ss_conf 997158664200463056775-303-578999999862017514--5508655034667611145778874156218999
Q gi|254780548|r 38 VATNSANYSPVSIAFTKFVSI-DEL-GGKVSEVVSKDLQRSDVF--NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVT 113 (447)
Q Consensus 38 i~It~~~~~pi~IAv~~f~~~-~~~-~~~i~~ii~~DL~~SG~F--~~i~~~~~~~~~~~~~~~~~f~~W~~~gad~lv~ 113 (447)
+.+..+......+||+||.-. +.+ +..++.-+..-|.+--.| .++|...-.. -.+.... ..-...++-||-++
T Consensus 108 v~~~~~~~s~~tlAIfPF~t~~~~~d~l~Lh~~LVQ~LS~y~~~GL~vlP~t~Tn~-C~d~~~i--~~fl~k~rPdYylt 184 (458)
T PRK11906 108 TKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNF-CNDHISQ--NSFLSRFKPDYFVT 184 (458)
T ss_pred ECCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEECCHHHHCC-HHHHHHH--HHHHHHCCCCEEEE
T ss_conf 14899987753799963324635557788899999986206987726435877500-0227889--99998409873887
Q ss_pred EEEEECCCCEEEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99740466225789998415554200002323377788999999989999975
Q gi|254780548|r 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166 (447)
Q Consensus 114 G~i~~~~~~~~~v~~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~l 166 (447)
|.+...|+ .-.+.++|.++.+-+.+...+....+ +...+..+-|-|.+.+
T Consensus 185 Gq~~~~g~-~~~L~IELI~ak~~~Li~~~sip~~e--lh~~~q~~i~~il~~v 234 (458)
T PRK11906 185 GRINQNNA-VNTLYIELIDAKNLFLIASNHLPVDE--LHNTSQFIIDNILQTV 234 (458)
T ss_pred EEEECCCC-CCEEEEEEEECCCCEEEEECCCCCCC--CCCHHHHHHHHHHHHC
T ss_conf 56412797-31799999952772675105767685--4125999999999853
No 270
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain; InterPro: IPR013428 Proteins containing this domain also contain several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (IPR013427 from INTERPRO) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) (Q44091 from SWISSPROT) shows some homolgy to this domain but lacks additional sequence regions found in this entry and belongs to a different clade of the larger family of homologues. .
Probab=78.25 E-value=3.6 Score=18.18 Aligned_cols=108 Identities=13% Similarity=0.183 Sum_probs=44.3
Q ss_pred CCCCEE--EEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEE
Q ss_conf 455402--688621764023455768998489985034676443037711797179974379852444551589556774
Q gi|254780548|r 198 RDGANI--RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275 (447)
Q Consensus 198 ~DG~n~--~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~ 275 (447)
.+|.+. ++. +... .+.+|.|-|||+ |.| ..+....-++. ..+.+-+ ..+|--|-+||+++=-
T Consensus 118 l~GF~~g~~~~-~~~~-~ln~~~wG~DG~-lYf---~~G~~~~~~~~--~~~~~~R--------~G~PY~~~nGkqvvdP 181 (459)
T TIGR02604 118 LDGFGGGLQQL-NVHH-SLNSLAWGPDGR-LYF---NHGNTLASKVT--RPGKRYR--------LGSPYVSQNGKQVVDP 181 (459)
T ss_pred EECCCCCCCCC-CCCC-CCCCCEECCCCH-HHH---HCCCCCCCCEE--CCCCEEE--------CCCCEECCCCCEEECC
T ss_conf 85566871001-3322-157523668743-433---07885531041--3763065--------0486352687543243
Q ss_pred ECCCC----------CEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECC
Q ss_conf 13787----------303899840477411002577643202552167478997237
Q gi|254780548|r 276 VQKDE----------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322 (447)
Q Consensus 276 ~s~~g----------~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr 322 (447)
.+-.+ .-.+|.++..+++++.+..+..+--+.+|..-|+ +++++++
T Consensus 182 ~~~~g~~s~~~~~~~gg~~~~~~P~~~~l~~~a~g~~Np~G~~~~~~Gd-~f~~~N~ 237 (459)
T TIGR02604 182 SALAGDRSDESRQGLGGGLFRYNPDGGKLEVVAHGFQNPYGHSFDSWGD-VFVTDND 237 (459)
T ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCEECCCCC-EEEECCC
T ss_conf 0015788860123667315787444857899874884752205635777-8997388
No 271
>PRK09194 prolyl-tRNA synthetase; Provisional
Probab=76.85 E-value=4 Score=17.92 Aligned_cols=45 Identities=4% Similarity=0.206 Sum_probs=24.4
Q ss_pred CCCCCCEEEEECCCCCCC-CHHHHHHHHHHHHHHCCCCEEECCHHH
Q ss_conf 586642004630567753-035789999998620175145508655
Q gi|254780548|r 42 SANYSPVSIAFTKFVSID-ELGGKVSEVVSKDLQRSDVFNLISQDS 86 (447)
Q Consensus 42 ~~~~~pi~IAv~~f~~~~-~~~~~i~~ii~~DL~~SG~F~~i~~~~ 86 (447)
.|-.+++.=.+..+-.-+ ..-++|.+||+..+++.|--+++=+..
T Consensus 29 aG~Ir~~~sGiy~~LPlg~rvl~Kie~IIr~em~~iGa~Ev~mp~l 74 (570)
T PRK09194 29 AGYIRKLASGIYTYLPLGLRVLRKIENIVREEMNKIGAQEVLMPAL 74 (570)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
T ss_conf 0673414377255424369999999999999998649879853567
No 272
>KOG1912 consensus
Probab=76.33 E-value=4.1 Score=17.83 Aligned_cols=148 Identities=14% Similarity=0.229 Sum_probs=73.6
Q ss_pred EEEECCCCCCEECCCCCCCCHH-HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCC---CCCCCEEEEEECCCCCEE
Q ss_conf 9984155542000023233777-889999999899999750445555441788751367---644210012311455402
Q gi|254780548|r 128 FRLWDVKDRKQIIGKKFFSSPA-SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV---SGIIKNSLCVMDRDGANI 203 (447)
Q Consensus 128 ~~L~dv~~~~~i~~~~~~~~~~-~~R~~ah~~ad~i~~~ltG~~G~f~triafv~~~~~---~~~~~~~l~i~d~DG~n~ 203 (447)
+-||++.+|..++.+.|.-..- .+|.=- | |--...+.|-+|+ +++.+..+ .+...++.+|. .|-+.+
T Consensus 137 lvLwntdtG~k~Wk~~ys~~iLs~f~~DP--f-d~rh~~~l~s~g~-----vl~~~~l~~sep~~pgk~~qI~-sd~Sdl 207 (1062)
T KOG1912 137 LVLWNTDTGEKFWKYDYSHEILSCFRVDP--F-DSRHFCVLGSKGF-----VLSCKDLGLSEPDVPGKEFQIT-SDHSDL 207 (1062)
T ss_pred EEEEECCCCCEEECCCCCCCCEEEEEECC--C-CCCEEEEECCCCE-----EEEEECCCCCCCCCCCEEEEEE-CCCCCH
T ss_conf 99997467744421346775124245178--8-8540799725866-----9997236789999876168983-676635
Q ss_pred EEE---EECCCCCEEEE------------EECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCC
Q ss_conf 688---62176402345------------576899848998503467644303771179717997437985244455158
Q gi|254780548|r 204 RYL---TPSRDQILFEP------------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268 (447)
Q Consensus 204 ~~l---~~~~~~~~~sP------------~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPD 268 (447)
..+ +-..+.+..+| +|+|-=+.|.|+.|. .+++++|++-......+.-..+..--..|-||
T Consensus 208 ~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~p----rellv~dle~~~~l~vvpier~~akfv~vlP~ 283 (1062)
T KOG1912 208 AHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFP----RELLVFDLEYECCLAVVPIERGGAKFVDVLPD 283 (1062)
T ss_pred HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHCEEEEEEC----CCEEEECCHHHCEEEEEEECCCCCCEEEECCC
T ss_conf 56555653166444788633588888765048123015999815----52189730460346888724688414685368
Q ss_pred CCE-EEEEECCCCCEEEEEEE
Q ss_conf 955-67741378730389984
Q gi|254780548|r 269 GKR-ALISVQKDEAMDIYSVD 288 (447)
Q Consensus 269 G~~-la~~~s~~g~~~I~~~d 288 (447)
+++ .+|..-.+|..-||+-.
T Consensus 284 ~~rd~LfclH~nG~ltirvrk 304 (1062)
T KOG1912 284 PRRDALFCLHSNGRLTIRVRK 304 (1062)
T ss_pred CCCCEEEEEECCCEEEEEEEE
T ss_conf 771347999618827999850
No 273
>KOG0321 consensus
Probab=76.29 E-value=4.1 Score=17.82 Aligned_cols=233 Identities=17% Similarity=0.235 Sum_probs=102.8
Q ss_pred HHHHCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
Q ss_conf 87415621899999740466225789998415554200002323377788999999989999975044555544178875
Q gi|254780548|r 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181 (447)
Q Consensus 102 ~W~~~gad~lv~G~i~~~~~~~~~v~~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~f~triafv~ 181 (447)
.|.. |-.-||. ..|+. ..++|||...+.+-+..|.|+....+.++..--|.-+...-|.-|-+ .|.=..
T Consensus 107 ~wap-ge~~lVs----asGDs----T~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~i--llWD~R 175 (720)
T KOG0321 107 KWAP-GESLLVS----ASGDS----TIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEI--LLWDCR 175 (720)
T ss_pred CCCC-CCEEEEE----CCCCC----EEEEEEECCCEEECCEEECCCCCCCCHHHHCCCCCCCEEECCCCCCE--EEEEEE
T ss_conf 1578-7226887----04894----23136502660221222114323202221156787605632677737--999975
Q ss_pred ECCCCCCCCEEEEEECCCCCEE-----EEEEEC-------CCCCE--EEEEECCCCCEEEEEEECCCCCCCCCEEEECCC
Q ss_conf 1367644210012311455402-----688621-------76402--345576899848998503467644303771179
Q gi|254780548|r 182 ESVVSGIIKNSLCVMDRDGANI-----RYLTPS-------RDQIL--FEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247 (447)
Q Consensus 182 ~~~~~~~~~~~l~i~d~DG~n~-----~~l~~~-------~~~~~--~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g 247 (447)
....+. ..+.-.+=+++.|- +++.+. ...|. .+-.+..|-..||=.+ ..+ .-|-++|++..
T Consensus 176 ~n~~d~--~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSag--a~D-~~iKVWDLRk~ 250 (720)
T KOG0321 176 CNGVDA--LEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAG--AAD-STIKVWDLRKN 250 (720)
T ss_pred CCCHHH--HHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEEEEEECCCEEEECC--CCC-CCEEEEEECCC
T ss_conf 053136--7887666530324777877632224655545667332026899972366145226--777-61378860355
Q ss_pred CCEEE-----EECCCCC----EEEEEECC--CCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCC--CC---CCEEEEC
Q ss_conf 71799-----7437985----24445515--89556774137873038998404774110025776--43---2025521
Q gi|254780548|r 248 RAPKR-----IGNFRSM----ILAPRFSS--NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF--IN---ISASYSP 311 (447)
Q Consensus 248 ~~~~~-----~~~~~~~----~~~p~wSP--DG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~--~d---~~p~~sp 311 (447)
...-. .-.++.. .+-..+.- -|.+|..+.. |+ .||.+|+.+-....+-...+ +. +--.-||
T Consensus 251 ~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCt-D~--sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSp 327 (720)
T KOG0321 251 YTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCT-DN--SIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSP 327 (720)
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEC-CC--CEEEEECCCCCCCCHHHCCCCCCCEEEEEEECCC
T ss_conf 55334687755676676542210378886277875777744-88--1799853545767204104740011466333377
Q ss_pred CCCEEEEEECCCCCCCEEEEEECCCCCCEEEE-ECCCCEEEEEECC
Q ss_conf 67478997237765331576402567411122-0353000046877
Q gi|254780548|r 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSP 356 (447)
Q Consensus 312 DG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~-~~~~~~~~p~wSP 356 (447)
||..++=.|- .+|.|+..++.-++--... +.........|.|
T Consensus 328 d~~~l~SgSs---d~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~p 370 (720)
T KOG0321 328 DDCSLLSGSS---DEQAYIWVVSSPEAPPALLLGHTREVTTVRWLP 370 (720)
T ss_pred CCCEEECCCC---CCCEEEEEECCCCCCHHHHHCCCEEEEEEEECC
T ss_conf 7862741578---753136640674678045417404788876336
No 274
>KOG2111 consensus
Probab=76.09 E-value=4.2 Score=17.79 Aligned_cols=170 Identities=21% Similarity=0.267 Sum_probs=93.7
Q ss_pred EEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEE
Q ss_conf 99984155542000023233777889999999899999750445555441788751367644210012311455402688
Q gi|254780548|r 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206 (447)
Q Consensus 127 ~~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~f~triafv~~~~~~~~~~~~l~i~d~DG~n~~~l 206 (447)
+.-+||=.+++.+..-.|.......|. -.-||+-|.+. +|++-.+ +.|+|++
T Consensus 76 kviIWDD~k~~~i~el~f~~~I~~V~l-------------------~r~riVvvl~~--------~I~VytF-~~n~k~l 127 (346)
T KOG2111 76 KVIIWDDLKERCIIELSFNSEIKAVKL-------------------RRDRIVVVLEN--------KIYVYTF-PDNPKLL 127 (346)
T ss_pred EEEEEECCCCCEEEEEEECCCEEEEEE-------------------CCCEEEEEECC--------EEEEEEC-CCCHHHE
T ss_conf 279975534666678883152346997-------------------07769999667--------6899976-8993343
Q ss_pred ----EECCCCCEEEEEECCCCC--EEEEEEECCCCCCCCCEEEECCCCC--EEEEECCCCCEEEEEECCCCCEEEEEECC
Q ss_conf ----621764023455768998--4899850346764430377117971--79974379852444551589556774137
Q gi|254780548|r 207 ----TPSRDQILFEPRFSPNQQ--KVAYATYDDEDILRVYLMDTRIDRA--PKRIGNFRSMILAPRFSSNGKRALISVQK 278 (447)
Q Consensus 207 ----~~~~~~~~~sP~wSpDG~--~Iay~s~~~~~~~~i~~~~~~~g~~--~~~~~~~~~~~~~p~wSPDG~~la~~~s~ 278 (447)
|..+ + -.--+.+|--. -|||-+ .+..+|-+.|+..... +..+..++......+.+-+|..||-++.+
T Consensus 128 ~~~et~~N-P-kGlC~~~~~~~k~~LafPg---~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStk 202 (346)
T KOG2111 128 HVIETRSN-P-KGLCSLCPTSNKSLLAFPG---FKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTK 202 (346)
T ss_pred EEEECCCC-C-CCEEEECCCCCCEEEECCC---CCCCEEEEEEHHHCCCCCCEEEECCCCCEEEEEECCCCCEEEEECCC
T ss_conf 46640259-9-8547644777725998778---86554899974315769966887126743799974886289971468
Q ss_pred CCCEEEEEEECCCCCCC-CC---CCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEE
Q ss_conf 87303899840477411-00---257764320255216747899723776533157640
Q gi|254780548|r 279 DEAMDIYSVDLQSNATE-RL---TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333 (447)
Q Consensus 279 ~g~~~I~~~d~~~~~~~-~l---T~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~ 333 (447)
+.-..| .|..+|+.. .+ ++...+ ..-+||||+++++-.||. |.-+||.+.-
T Consensus 203 GTLIRI--Fdt~~g~~l~E~RRG~d~A~i-y~iaFSp~~s~LavsSdK-gTlHiF~l~~ 257 (346)
T KOG2111 203 GTLIRI--FDTEDGTLLQELRRGVDRADI-YCIAFSPNSSWLAVSSDK-GTLHIFSLRD 257 (346)
T ss_pred CEEEEE--EECCCCCEEEEEECCCCHHEE-EEEEECCCCCEEEEECCC-CEEEEEEEEC
T ss_conf 579999--976889685655148750027-999727986279998389-7599998406
No 275
>PRK09495 glnH glutamine ABC transporter periplasmic protein; Reviewed
Probab=75.65 E-value=4.3 Score=17.71 Aligned_cols=66 Identities=20% Similarity=0.258 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEE-EEEE-ECCCCCCCEEEEECCCCCCCC---HHHHHHHHHHHHHHCCCCEEECC
Q ss_conf 99999999999998720213316-9999-715866420046305677530---35789999998620175145508
Q gi|254780548|r 13 MKINLCLLLVLIGGFFPTSIHAF-VKVA-TNSANYSPVSIAFTKFVSIDE---LGGKVSEVVSKDLQRSDVFNLIS 83 (447)
Q Consensus 13 m~~~l~l~l~l~~~~~~~~a~A~-~~i~-It~~~~~pi~IAv~~f~~~~~---~~~~i~~ii~~DL~~SG~F~~i~ 83 (447)
||+++.++++++.++++.+++|. -++. -+.+..-|+. |...+. ..-++.+.|...|..-=.|..++
T Consensus 1 mk~~~~~~~~~~~~~~~~~~~a~~~~l~Vg~~~~~pPf~-----f~~~g~~~GfdvDl~~~ia~~lg~~~e~~~~~ 71 (247)
T PRK09495 1 MKSVLKVSLAALTLAFAVSSHAADKELVVATDTAFVPFE-----FKQGDKYVGFDVDLWAAIAKELKLDYTLKPMD 71 (247)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEE-----ECCCCEEEEEHHHHHHHHHHHHCCCEEEEECC
T ss_conf 977999999999999987665149949999899879805-----76799278829999999999969946999778
No 276
>KOG1036 consensus
Probab=74.60 E-value=4.5 Score=17.54 Aligned_cols=201 Identities=13% Similarity=0.130 Sum_probs=81.7
Q ss_pred EEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCE
Q ss_conf 01231145540268862176402345576899848998503467644303771179717997437985244455158955
Q gi|254780548|r 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271 (447)
Q Consensus 192 ~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~ 271 (447)
+|...|..+.+.-+|-.+.+. +..-..++--..+.=-++. ..|-++|.+. +...-..+.+...++ -+--|.+
T Consensus 76 ~vr~~Dln~~~~~~igth~~~-i~ci~~~~~~~~vIsgsWD----~~ik~wD~R~-~~~~~~~d~~kkVy~--~~v~g~~ 147 (323)
T KOG1036 76 QVRRYDLNTGNEDQIGTHDEG-IRCIEYSYEVGCVISGSWD----KTIKFWDPRN-KVVVGTFDQGKKVYC--MDVSGNR 147 (323)
T ss_pred EEEEEEECCCCCEEECCCCCC-EEEEEEECCCCEEEECCCC----CCEEEEECCC-CCCCCCCCCCCEEEE--EECCCCE
T ss_conf 499998147852130147875-4789852357808976467----5079972434-312343226862899--8615987
Q ss_pred EEEEECCCCCEEEEEEECCCCCC-CCC-CCC-CCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCC---CCCEEEEEC
Q ss_conf 67741378730389984047741-100-257-764320255216747899723776533157640256---741112203
Q gi|254780548|r 272 ALISVQKDEAMDIYSVDLQSNAT-ERL-TNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS---DQKRISQDK 345 (447)
Q Consensus 272 la~~~s~~g~~~I~~~d~~~~~~-~~l-T~~-~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~---~~~rlT~~~ 345 (447)
|++..+ +- .+..+|+..-.. .|. +.. ..--..-+.-|.+.-- +.|.-.|+ +++-..+.. ..++-+|..
T Consensus 148 LvVg~~-~r--~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy-~~sSieGR--VavE~~d~s~~~~skkyaFkC 221 (323)
T KOG1036 148 LVVGTS-DR--KVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGY-VVSSIEGR--VAVEYFDDSEEAQSKKYAFKC 221 (323)
T ss_pred EEEEEC-CC--EEEEEECCCCCCHHHHCCCCCEEEEEEEEEECCCCCE-EEEEECCE--EEEECCCCCHHHHHHCEEEEE
T ss_conf 999625-74--6999985446540221255630387788970388726-98741346--898836875677420126773
Q ss_pred ----------CCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCC-EEEEECC-CCCCCCEECCCCCEEEEEEE
Q ss_conf ----------5300004687768889999714991579999889996-7996627-87554378878998999995
Q gi|254780548|r 346 ----------EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVED-SNLQAPTWSPSGRSLIFSRK 409 (447)
Q Consensus 346 ----------~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~-~~~lt~~-~~~e~P~wSPDG~~i~f~~~ 409 (447)
.|...+.+++|--..+| +...+|. +-..|+..+. .+++... ...-+-+||-||..++-++.
T Consensus 222 Hr~~~~~~~~~yPVNai~Fhp~~~tfa-TgGsDG~--V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~s 294 (323)
T KOG1036 222 HRLSEKDTEIIYPVNAIAFHPIHGTFA-TGGSDGI--VNIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIASS 294 (323)
T ss_pred EECCCCCCEEEEEECEEEECCCCCEEE-ECCCCCE--EEECCCCCHHHHHHCCCCCCCEEEEEECCCCCEEEEEEC
T ss_conf 053569935889722058602201278-6587726--997167551315341588872478995367776899850
No 277
>KOG4499 consensus
Probab=73.76 E-value=4.8 Score=17.41 Aligned_cols=46 Identities=15% Similarity=0.107 Sum_probs=20.1
Q ss_pred CEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCC
Q ss_conf 1799743798524445515895567741378730389984047741
Q gi|254780548|r 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294 (447)
Q Consensus 249 ~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~ 294 (447)
..+++-+.-++.-+-+|+-|-|+..|.-+.+-.-+-|-+|..+|.+
T Consensus 149 ~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~ 194 (310)
T KOG4499 149 QVELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDL 194 (310)
T ss_pred CCEEEEHHCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCC
T ss_conf 7302540026776532354674799982575077642137876532
No 278
>KOG0649 consensus
Probab=73.05 E-value=4.9 Score=17.29 Aligned_cols=70 Identities=14% Similarity=0.276 Sum_probs=27.4
Q ss_pred CCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEE-CCCCCEEEEEECCCCCEEEEEEECCCCCCCCC
Q ss_conf 6899848998503467644303771179717997437985244455-15895567741378730389984047741100
Q gi|254780548|r 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-SSNGKRALISVQKDEAMDIYSVDLQSNATERL 297 (447)
Q Consensus 220 SpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~w-SPDG~~la~~~s~~g~~~I~~~d~~~~~~~~l 297 (447)
-|.-+.|.+. .+ ...+|-+|+++|+-.+....+....-+..- +..| -+++.++||...|| |..+++..+.
T Consensus 123 dP~enSi~~A---gG-D~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~--qilsG~EDGtvRvW--d~kt~k~v~~ 193 (325)
T KOG0649 123 DPSENSILFA---GG-DGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANG--QILSGAEDGTVRVW--DTKTQKHVSM 193 (325)
T ss_pred CCCCCCEEEE---CC-CEEEEEEEECCCEEEEEECCCCCEEEEEEECCCCC--CEEECCCCCCEEEE--ECCCCCEEEE
T ss_conf 1677837992---38-73899998327779999827754245551135676--32314777617987--6265533677
No 279
>cd00738 HGTP_anticodon HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl tRNA synthetases, which are classified as a group of class II aminoacyl-tRNA synthetases (aaRS). In aaRSs, the anticodon binding domain is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only. This domain is also found in the accessory subunit of mitochondrial polymerase gamma (Pol gamma b).
Probab=72.66 E-value=5 Score=17.24 Aligned_cols=73 Identities=11% Similarity=0.111 Sum_probs=43.9
Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEEECCCCEEEE
Q ss_conf 20046305677530357899999986201751455086550346676111457788741562189999974046622578
Q gi|254780548|r 47 PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126 (447)
Q Consensus 47 pi~IAv~~f~~~~~~~~~i~~ii~~DL~~SG~F~~i~~~~~~~~~~~~~~~~~f~~W~~~gad~lv~G~i~~~~~~~~~v 126 (447)
|+.|+|.|-......-.+.+.-|.+.|...|.=-.++... ...-..|.+|..+|+.|.+.-.-....+|.+.+
T Consensus 1 P~qv~Iipi~~~~~e~~~~a~~l~~~L~~~gi~v~~Ddr~-------~~~g~k~~~a~~~giP~~iiiG~~e~e~~~v~v 73 (94)
T cd00738 1 PIDVAIVPLTDPRVEAREYAQKLLNALLANGIRVLYDDRE-------RKIGKKFREADLRGVPFAVVVGEDELENGKVTV 73 (94)
T ss_pred CEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCC-------CCHHHHHHHHHHCCCCEEEEECCHHHHCCEEEE
T ss_conf 9199999843897789999999999999889989998799-------997599999997499899998800343798999
No 280
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=72.64 E-value=5 Score=17.23 Aligned_cols=13 Identities=8% Similarity=0.355 Sum_probs=7.3
Q ss_pred EEEEEECCCCCCC
Q ss_conf 3899840477411
Q gi|254780548|r 283 DIYSVDLQSNATE 295 (447)
Q Consensus 283 ~I~~~d~~~~~~~ 295 (447)
.+|.+|++.|+..
T Consensus 210 ~~~a~~~~~G~~~ 222 (370)
T COG1520 210 ILYALNAEDGTLK 222 (370)
T ss_pred EEEEEECCCCCEE
T ss_conf 6999987789482
No 281
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=72.03 E-value=5.2 Score=17.14 Aligned_cols=20 Identities=15% Similarity=-0.032 Sum_probs=13.7
Q ss_pred EEEEECCCCCCCEEEEECCC
Q ss_conf 99997158664200463056
Q gi|254780548|r 36 VKVATNSANYSPVSIAFTKF 55 (447)
Q Consensus 36 ~~i~It~~~~~pi~IAv~~f 55 (447)
-.-++..+-..|-.||+.|-
T Consensus 21 ~~~vva~GL~~PW~maflPD 40 (454)
T TIGR03606 21 DKKVLLSGLNKPWALLWGPD 40 (454)
T ss_pred EEEEEECCCCCCEEEEEECC
T ss_conf 79980169999606679489
No 282
>COG3417 FlgN Collagen-binding surface adhesin SpaP (antigen I/II family) [General function prediction only]
Probab=70.68 E-value=5.6 Score=16.95 Aligned_cols=20 Identities=30% Similarity=0.398 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 6799999999999998720213
Q gi|254780548|r 11 LNMKINLCLLLVLIGGFFPTSI 32 (447)
Q Consensus 11 ~~m~~~l~l~l~l~~~~~~~~a 32 (447)
++||+...++++ ++|+..++
T Consensus 2 tk~k~~~~il~~--al~l~GCs 21 (200)
T COG3417 2 TKMKIYASILLL--ALFLSGCS 21 (200)
T ss_pred CHHHHHHHHHHH--HHHHHHCC
T ss_conf 257999999999--99984113
No 283
>pfam12566 DUF3748 Protein of unknown function (DUF3748). This domain family is found in bacteria and eukaryotes, and is approximately 120 amino acids in length.
Probab=69.77 E-value=3.5 Score=18.29 Aligned_cols=10 Identities=50% Similarity=0.976 Sum_probs=3.7
Q ss_pred ECCCCCEEEE
Q ss_conf 8878998999
Q gi|254780548|r 397 WSPSGRSLIF 406 (447)
Q Consensus 397 wSPDG~~i~f 406 (447)
|||||+++-|
T Consensus 75 fSpdG~~lSF 84 (122)
T pfam12566 75 FSPDGSRLSF 84 (122)
T ss_pred ECCCCCEEEE
T ss_conf 8899989987
No 284
>pfam12458 DUF3686 ATPase involved in DNA repair. This domain family is found in bacteria, and is approximately 450 amino acids in length. There are two conserved sequence motifs: DVF and SPNGED.
Probab=69.75 E-value=5.8 Score=16.81 Aligned_cols=109 Identities=14% Similarity=0.244 Sum_probs=62.3
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCC---CEEEEEECCCCC
Q ss_conf 38998404774110025776432025521674789972377653315764025674111220353---000046877688
Q gi|254780548|r 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA---SYFDPVWSPQGD 359 (447)
Q Consensus 283 ~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~---~~~~p~wSPdG~ 359 (447)
.-+++|..++++.|| .+|.-+..--||.+-|+|. +| -| +.+|+.+. |+... .+..-.=||+|+
T Consensus 254 RylVfNt~t~~V~Ri---DaIg~acv~LPeDqGIIFP---gG---Yy---LqtG~~Kt--Fd~~~~~l~F~r~irSPNGE 319 (448)
T pfam12458 254 RYLVFNTRTKKVVRI---DAIGQACVLLPEDHGIIFP---GG---YY---LQTGEYKT--FDTDLDGLRFERTIRSPNGE 319 (448)
T ss_pred EEEEEECCCCEEEEE---HHHHHHHHCCCCCCCEECC---CC---EE---ECCCCCCC--CCCCCCCCEEEEEECCCCCC
T ss_conf 699996365318982---0134687409655716727---92---07---22678610--13567771798863498986
Q ss_pred EEEE--EECCCCCEEEEEEECCCCCE-EEEECCCCCCCCEECCCCCEEEEEEE
Q ss_conf 8999--97149915799998899967-99662787554378878998999995
Q gi|254780548|r 360 LIAF--TKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRK 409 (447)
Q Consensus 360 ~Iaf--~~~~~~~~~i~~~~~~g~~~-~~lt~~~~~e~P~wSPDG~~i~f~~~ 409 (447)
-+.| .....|.+-++.+|+=.++. ..|.- ..=+.-.||++++|...
T Consensus 320 DvLYvF~~~~~g~~~L~~YNlI~k~v~tPi~c----hGyal~~DG~lv~frae 368 (448)
T pfam12458 320 DVLYVFYEREEGRYLLLPYNLIRKEVATPIIC----HGYALFEDGRLVVFRAE 368 (448)
T ss_pred EEEEEEEECCCCCEEEEEHHHHHHHHCCCEEC----CCEEEECCCEEEEEECC
T ss_conf 17999997688818987515546653487540----43478539879999668
No 285
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat; InterPro: IPR011964 This entry represents a repeat of about 40 amino acids found in a variety of archaea and bacteria which can be present in up to 14 copies per protein. The archaeal species Methanosarcina mazei contains several predicted surface layer proteins (SLPs) containing tandem copies of this repeat . The crystal structure of one of these proteins (Q50245 from SWISSPROT), containing seven tandem copies of this repeat, was examined. Individually, these repeats form four-stranded beta blades, while the seven copies together form a seven-bladed beta propeller domain. This repeat shows sequence similarity to the WD-40 repeat (IPR001680 from INTERPRO) and may play a similar role, serving as a rigid scaffold for protein interactions..
Probab=69.44 E-value=5.9 Score=16.77 Aligned_cols=10 Identities=30% Similarity=0.557 Sum_probs=4.2
Q ss_pred CCEEEECCCC
Q ss_conf 3037711797
Q gi|254780548|r 239 VYLMDTRIDR 248 (447)
Q Consensus 239 i~~~~~~~g~ 248 (447)
+++.|..|.+
T Consensus 16 VsVIDt~T~~ 25 (42)
T TIGR02276 16 VSVIDTATNK 25 (42)
T ss_pred EEEEECCCCC
T ss_conf 8889698681
No 286
>cd00858 GlyRS_anticodon GlyRS Glycyl-anticodon binding domain. GlyRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=67.76 E-value=6.4 Score=16.55 Aligned_cols=91 Identities=16% Similarity=0.191 Sum_probs=55.7
Q ss_pred EEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEE
Q ss_conf 99715866420046305677530357899999986201751455086550346676111457788741562189999974
Q gi|254780548|r 38 VATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117 (447)
Q Consensus 38 i~It~~~~~pi~IAv~~f~~~~~~~~~i~~ii~~DL~~SG~F~~i~~~~~~~~~~~~~~~~~f~~W~~~gad~lv~G~i~ 117 (447)
+-.--....|+.|+|.|....+. -.+.++-|.+.|...|.--.++.+. + -+ ..|.+|..+|+.|.++-.-.
T Consensus 17 vl~lP~~lAP~qv~IiPi~~~d~-~~~~a~~i~~~L~~~gi~v~~Dd~~------s-~G-~K~~~~d~~giP~~ivIg~~ 87 (121)
T cd00858 17 VLRLPPALAPIKVAVLPLVKRDE-LVEIAKEISEELRELGFSVKYDDSG------S-IG-RRYARQDEIGTPFCVTVDFD 87 (121)
T ss_pred EEECCCCCCCCEEEEEECCCCHH-HHHHHHHHHHHHHHCCCEEEEECCC------C-HH-HHHHHHHHHCCCEEEEEECC
T ss_conf 99878863883799997416077-7999999999998779779970388------8-31-44467887489839999276
Q ss_pred ECCCCEEEEEEEEECCCCCCEE
Q ss_conf 0466225789998415554200
Q gi|254780548|r 118 KEGKDRLRVEFRLWDVKDRKQI 139 (447)
Q Consensus 118 ~~~~~~~~v~~~L~dv~~~~~i 139 (447)
...+|. |+++--|......+
T Consensus 88 ~le~~~--VtiR~Rdt~~q~~v 107 (121)
T cd00858 88 TLEDGT--VTIRERDSMRQVRV 107 (121)
T ss_pred EECCCE--EEEEECCCCCEEEE
T ss_conf 103787--99999899957899
No 287
>KOG0276 consensus
Probab=67.74 E-value=6.4 Score=16.54 Aligned_cols=12 Identities=8% Similarity=0.495 Sum_probs=4.6
Q ss_pred EEEECCCCCCEE
Q ss_conf 998415554200
Q gi|254780548|r 128 FRLWDVKDRKQI 139 (447)
Q Consensus 128 ~~L~dv~~~~~i 139 (447)
+|+|+-.+++.+
T Consensus 79 IrVfnynt~ekV 90 (794)
T KOG0276 79 IRVFNYNTGEKV 90 (794)
T ss_pred EEEEECCCCEEE
T ss_conf 999962663046
No 288
>PRK13528 outer membrane receptor FepA; Provisional
Probab=66.97 E-value=6.6 Score=16.46 Aligned_cols=21 Identities=29% Similarity=0.022 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHHHHHHHCC
Q ss_conf 767999999999999987202
Q gi|254780548|r 10 ELNMKINLCLLLVLIGGFFPT 30 (447)
Q Consensus 10 ~~~m~~~l~l~l~l~~~~~~~ 30 (447)
|+.||++..+.++|++++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~l~~~~ 23 (727)
T PRK13528 3 MRANKILWLLTVVLAGLNSQL 23 (727)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
T ss_conf 304669999999999875055
No 289
>KOG2066 consensus
Probab=66.88 E-value=6.6 Score=16.43 Aligned_cols=19 Identities=11% Similarity=0.060 Sum_probs=7.1
Q ss_pred CCCCCEEEEEECCCCCEEEEE
Q ss_conf 379852444551589556774
Q gi|254780548|r 255 NFRSMILAPRFSSNGKRALIS 275 (447)
Q Consensus 255 ~~~~~~~~p~wSPDG~~la~~ 275 (447)
+..|...+-.|. |.-||++
T Consensus 158 ~~eG~I~~i~W~--g~lIAWa 176 (846)
T KOG2066 158 EGEGPIHSIKWR--GNLIAWA 176 (846)
T ss_pred CCCCCEEEEEEC--CCEEEEE
T ss_conf 576655888862--7378886
No 290
>COG3211 PhoX Predicted phosphatase [General function prediction only]
Probab=66.86 E-value=6.7 Score=16.43 Aligned_cols=39 Identities=23% Similarity=0.446 Sum_probs=23.4
Q ss_pred EECCCCCE-EEEECCCCCC--CCEECCCCCEEEEEEEECCCC
Q ss_conf 98899967-9966278755--437887899899999508987
Q gi|254780548|r 376 MKKDGSQE-RLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDT 414 (447)
Q Consensus 376 ~~~~g~~~-~~lt~~~~~e--~P~wSPDG~~i~f~~~~~g~~ 414 (447)
-+...+.. +-+|....+| .|+|||||+.+.-.-+..|..
T Consensus 537 ~~p~~g~~~rf~t~P~g~E~tG~~FspD~~TlFV~vQHPGe~ 578 (616)
T COG3211 537 PDPKTGTIKRFLTGPIGCEFTGPCFSPDGKTLFVNVQHPGET 578 (616)
T ss_pred CCCCCCEEEEECCCCCCCEEECCEECCCCCEEEEEECCCCCC
T ss_conf 888621353311388764253213579886589984278876
No 291
>KOG4227 consensus
Probab=65.44 E-value=7.1 Score=16.25 Aligned_cols=109 Identities=17% Similarity=0.223 Sum_probs=54.2
Q ss_pred EEEEECCCCCEEEEEEECCCCCCCCCEEEECCC---CCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCC
Q ss_conf 345576899848998503467644303771179---71799743798524445515895567741378730389984047
Q gi|254780548|r 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRID---RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291 (447)
Q Consensus 215 ~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g---~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~ 291 (447)
+.-.-+|--+.++-++ +.+ .+-++|.+.. ...-.+++.+..-.+.-|.|---.|+.+.+..|.+.+|-.....
T Consensus 153 Y~m~~~P~DN~~~~~t-~~~---~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~ 228 (609)
T KOG4227 153 YHMDQHPTDNTLIVVT-RAK---LVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQA 228 (609)
T ss_pred EECCCCCCCCEEEEEE-CCC---EEEEEECCCCCCCCCEEEECCCCCCCEEEEECCCCCEEEEECCCCCCCCCEEECCCC
T ss_conf 3124477775578871-585---389985467888886352357876411466258885047750566898713202543
Q ss_pred CCCCCCCCCCCC---C---CCEEEECCCCEEEEEECCCCCCCEE
Q ss_conf 741100257764---3---2025521674789972377653315
Q gi|254780548|r 292 NATERLTNTLFI---N---ISASYSPDSSQIVFESDREGKEQLY 329 (447)
Q Consensus 292 ~~~~~lT~~~~~---d---~~p~~spDG~~I~f~Sdr~G~~qiy 329 (447)
..+-|-.-..+. . .+..|+|.|.++. +=|.|.+-+|
T Consensus 229 ~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~m--siRR~~~P~~ 270 (609)
T KOG4227 229 RPVYQRSMFKGLPQENTEWMGSLWSPSGNQFM--SIRRGKCPLY 270 (609)
T ss_pred CHHHHHCCCCCCCCCCCHHHHEEECCCCCEEH--HHHCCCCCEE
T ss_conf 47776403046852130125415688877302--2242699777
No 292
>KOG0270 consensus
Probab=65.10 E-value=7.2 Score=16.21 Aligned_cols=67 Identities=13% Similarity=0.145 Sum_probs=38.9
Q ss_pred EEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEE
Q ss_conf 4557689984899850346764430377117971799743798524445515895567741378730389
Q gi|254780548|r 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285 (447)
Q Consensus 216 sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~ 285 (447)
+-+|.-+-+.|.... ... ..|-++|+.+|+..+.++.+.+...+-.|.|---.++.+.+.++.-.|+
T Consensus 248 ~Ls~n~~~~nVLaSg-saD--~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~ 314 (463)
T KOG0270 248 ALSWNRNFRNVLASG-SAD--KTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALK 314 (463)
T ss_pred HHHHCCCCCEEEEEC-CCC--CEEEEEECCCCCCCEEHHHCCCCEEEEEECCCCCEEEEECCCCCEEEEE
T ss_conf 877501320067734-787--4389987677872043131278325887327886189841556447865
No 293
>KOG1587 consensus
Probab=65.02 E-value=7.2 Score=16.20 Aligned_cols=47 Identities=9% Similarity=0.094 Sum_probs=21.4
Q ss_pred CCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEE
Q ss_conf 30377117971799743798524445515895567741378730389
Q gi|254780548|r 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285 (447)
Q Consensus 239 i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~ 285 (447)
+|++++.....++..-..+.....-.|+|.-..+++....+|+--+|
T Consensus 224 ~~vW~~~~p~~Pe~~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lW 270 (555)
T KOG1587 224 LLVWSLKNPNTPELVLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLW 270 (555)
T ss_pred EEEEECCCCCCCEEEEECCCCEEEEEECCCCCCEEEEECCCCEEEEE
T ss_conf 79984678998328996588636998546885528863367639998
No 294
>pfam09910 DUF2139 Uncharacterized protein conserved in archaea (DUF2139). This domain, found in various hypothetical archaeal proteins, has no known function.
Probab=62.35 E-value=8 Score=15.88 Aligned_cols=15 Identities=27% Similarity=0.421 Sum_probs=7.5
Q ss_pred CCEEEEEEECCCCCE
Q ss_conf 733799998899714
Q gi|254780548|r 414 TGSKLYSIDLNGRNE 428 (447)
Q Consensus 414 ~~~~l~~~~~~G~~~ 428 (447)
.+..|-.|...|.+.
T Consensus 311 fGARITSme~~g~ki 325 (339)
T pfam09910 311 FGARITSIEKMGDKV 325 (339)
T ss_pred CCCEEEEEECCCCEE
T ss_conf 340688630139889
No 295
>PRK11023 hypothetical protein; Provisional
Probab=61.63 E-value=5.7 Score=16.90 Aligned_cols=23 Identities=4% Similarity=0.075 Sum_probs=10.3
Q ss_pred HHHHHHHHCCCCCCCCCCEEEEE
Q ss_conf 89999975044555544178875
Q gi|254780548|r 159 SDDIYQSITGEKGDFNSRILFVS 181 (447)
Q Consensus 159 ad~i~~~ltG~~G~f~triafv~ 181 (447)
+-.+-.+|...+++-.++|-.++
T Consensus 129 ttkvk~~ll~~~~v~s~~ikV~t 151 (191)
T PRK11023 129 TTKVRSQLLTSDSVKSSNVKVTT 151 (191)
T ss_pred HHHHHHHHHHCCCCCCCEEEEEE
T ss_conf 99999998737797763789999
No 296
>pfam10566 Glyco_hydro_97 Glycoside hydrolase 97. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands.
Probab=61.31 E-value=5.4 Score=17.01 Aligned_cols=12 Identities=17% Similarity=0.407 Sum_probs=9.7
Q ss_pred CEEEEEEEEECC
Q ss_conf 225789998415
Q gi|254780548|r 122 DRLRVEFRLWDV 133 (447)
Q Consensus 122 ~~~~v~~~L~dv 133 (447)
.++.|+||+||=
T Consensus 120 ~~l~v~fRvydD 131 (643)
T pfam10566 120 RKLNLVVRAYNE 131 (643)
T ss_pred CEEEEEEEEECC
T ss_conf 408999999369
No 297
>TIGR02434 CobF precorrin-6A synthase (deacetylating); InterPro: IPR012797 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase . In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase . There are at least two distinct cobalamin biosynthetic pathways in bacteria : Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway ; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis ; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) . There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobF precorrin-6A synthase (2.1.1.152 from EC), a pathway-specific enzyme in the aerobic pathway. After precorrin-4 is methylated at C-11 by CobM to produce precorrin-5, the extruded acyl group is then removed in the subsequent step, which also sees a methyl group added at C-1 in a reaction catalysed by CobF. The product of this reaction is precorrin-6A, which is subsequently reduced by an NADH-dependent reductase to precorrin-6B . This entry identifies CobF in high GC Gram-positive, alphaproteobacteria and pseudomonas-related species..
Probab=61.01 E-value=7 Score=16.27 Aligned_cols=98 Identities=12% Similarity=0.281 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCEECC
Q ss_conf 57899999986201751455086550346676111457788741562189999974046622578999841555420000
Q gi|254780548|r 62 GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141 (447)
Q Consensus 62 ~~~i~~ii~~DL~~SG~F~~i~~~~~~~~~~~~~~~~~f~~W~~~gad~lv~G~i~~~~~~~~~v~~~L~dv~~~~~i~~ 141 (447)
|++++--=-+-|+.+-.|-++++.. ++++...+. +.+=..| .-. ...++ +++ +++-|-...+.--+
T Consensus 13 Pe~LT~qAv~AL~~adV~f~~dKG~------~KsdL~~lR--r~I~~r~--rPd-~~~~g--~R~-ve~~dP~Rd~~~~~ 78 (259)
T TIGR02434 13 PEQLTLQAVEALNHADVFFVLDKGE------DKSDLVELR--REICERY--RPD-VTEPG--YRI-VEVDDPERDRDAQA 78 (259)
T ss_pred CCHHHHHHHHHHHCCCEEEEECCCC------CHHHHHHHH--HHHHHHH--CCC-CCCCC--CEE-EEEECCCCCCCCCC
T ss_conf 3426899998871483899975873------237999999--9999871--789-88779--437-88787888843672
Q ss_pred CCCCCCHHHHH-HHHHHHHHHHHHHHC-CCCCCC
Q ss_conf 23233777889-999999899999750-445555
Q gi|254780548|r 142 KKFFSSPASWR-KIAHTISDDIYQSIT-GEKGDF 173 (447)
Q Consensus 142 ~~~~~~~~~~R-~~ah~~ad~i~~~lt-G~~G~f 173 (447)
..|...+.+|| +.||+++..|-+.|- |+.|.|
T Consensus 79 ~~Y~~~V~~WH~~rA~~~~~~i~~~L~~~g~GAF 112 (259)
T TIGR02434 79 ADYRAAVDDWHAQRADIYAQAIAEELGDDGTGAF 112 (259)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 3427789999999999999999974599965677
No 298
>KOG2377 consensus
Probab=60.20 E-value=8.8 Score=15.63 Aligned_cols=13 Identities=15% Similarity=0.358 Sum_probs=5.6
Q ss_pred EEECCCCCEEEEEE
Q ss_conf 55768998489985
Q gi|254780548|r 217 PRFSPNQQKVAYAT 230 (447)
Q Consensus 217 P~wSpDG~~Iay~s 230 (447)
-.|+.. ..||+++
T Consensus 118 F~W~~s-~e~A~i~ 130 (657)
T KOG2377 118 FCWTSS-TEIAFIT 130 (657)
T ss_pred EEEECC-CEEEEEE
T ss_conf 997557-1599994
No 299
>pfam00349 Hexokinase_1 Hexokinase. Hexokinase (EC:2.7.1.1) contains two structurally similar domains represented by this family and pfam03727. Some members of the family have two copies of each of these domains.
Probab=59.62 E-value=9 Score=15.57 Aligned_cols=66 Identities=21% Similarity=0.357 Sum_probs=46.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC---CEEEEEECCCCCCCCEEEEEECCCCCEEEEEE
Q ss_conf 02323377788999999989999975044555544---17887513676442100123114554026886
Q gi|254780548|r 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS---RILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207 (447)
Q Consensus 141 ~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~f~t---riafv~~~~~~~~~~~~l~i~d~DG~n~~~l~ 207 (447)
-+.|..+..++|.++++|..++.+-|.++.+.-.+ -..||.. ..+++..-+-...|.-|+|.|.+.
T Consensus 10 ~~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~s~~~Mlpt~V~~-lPtG~E~G~~lAlDlGGTN~RV~~ 78 (205)
T pfam00349 10 LNQFRVSTETLREVVKRFISEMEKGLSKEGGNLAAVPMLPTFVRS-TPTGTEKGDFLALDLGGTNFRVLL 78 (205)
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC-CCCCCCCCEEEEEEECCCEEEEEE
T ss_conf 986189999999999999999998874378988755125000267-899875523999960685489999
No 300
>cd02426 Pol_gamma_b_Cterm C-terminal domain of mitochondrial DNA polymerase gamma B subunit, which is required for processivity. Polymerase gamma replicates and repairs mitochondrial DNA. The c-terminal domain of its B subunit is strikingly similar to the anticodon-binding domain of glycyl tRNA synthetase.
Probab=59.36 E-value=9 Score=15.54 Aligned_cols=98 Identities=9% Similarity=0.035 Sum_probs=58.9
Q ss_pred EEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCCCCCCCHHHHHHCCCCEEEEEE
Q ss_conf 99997158664200463056775303578999999862017514550865503466761114577887415621899999
Q gi|254780548|r 36 VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR 115 (447)
Q Consensus 36 ~~i~It~~~~~pi~IAv~~f~~~~~~~~~i~~ii~~DL~~SG~F~~i~~~~~~~~~~~~~~~~~f~~W~~~gad~lv~G~ 115 (447)
-.+-.-.+...|+.+||+|......--.++++-|.++|...|+- +...-.+-. +...-..|..--.+|+.|-|+-.
T Consensus 16 R~vL~Lhp~LAP~Kvai~~~~~~~~eL~~~a~~l~~~L~~~gi~-v~~~~~~d~---~~sIGkrY~r~DeiGtP~citvD 91 (128)
T cd02426 16 RQVLKLHPCLAPYKVAIDCGKGDTAELRDLCQGLKNELREAGLS-VWPGYLETQ---HSSLEQLLDKYDEMGVLFTLLIS 91 (128)
T ss_pred EEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCC---CCCHHHHHHHHHHCCCCEEEEEC
T ss_conf 37984488747717999703688188899999999999873994-354635454---34788988776642884799977
Q ss_pred EEECCCCEEEEEEEEECCCCCCEE
Q ss_conf 740466225789998415554200
Q gi|254780548|r 116 VIKEGKDRLRVEFRLWDVKDRKQI 139 (447)
Q Consensus 116 i~~~~~~~~~v~~~L~dv~~~~~i 139 (447)
.+...+|. |.+|=-|...+..|
T Consensus 92 ~~TLedgt--VtlR~RDT~~QerI 113 (128)
T cd02426 92 EQTLENGL--LQLRSRDTTLKETI 113 (128)
T ss_pred CCCCCCCC--EEEEECCCCHHEEE
T ss_conf 87434795--89885476021357
No 301
>pfam05694 SBP56 56kDa selenium binding protein (SBP56). This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins, in vesicular Golgi transport.
Probab=58.13 E-value=9.5 Score=15.40 Aligned_cols=23 Identities=17% Similarity=0.212 Sum_probs=14.0
Q ss_pred CCCEEEEEEEEECCCCEEEEEEEEECCCCC
Q ss_conf 621899999740466225789998415554
Q gi|254780548|r 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136 (447)
Q Consensus 107 gad~lv~G~i~~~~~~~~~v~~~L~dv~~~ 136 (447)
.-.+|+...+.. ++ +.++||.+.
T Consensus 86 ~Rr~LivPgL~S---sr----IyIiDv~td 108 (461)
T pfam05694 86 ERRYLIVPGLRS---SR----IYIVDTKPD 108 (461)
T ss_pred CCCEEEEEEECC---CC----EEEEECCCC
T ss_conf 355399444334---87----899978899
No 302
>pfam08553 VID27 VID27 cytoplasmic protein. This is a family of fungal and plant proteins and contains many hypothetical proteins. VID27 is a cytoplasmic protein that plays a potential role in vacuolar protein degradation.
Probab=55.73 E-value=10 Score=15.14 Aligned_cols=133 Identities=17% Similarity=0.236 Sum_probs=59.7
Q ss_pred CCEEEEEEECCCCCCCCCC-CCCCCCCCEEEECCCCEE------EE--EECCCCCCCEEEEEECCCCCCEEEEEC--CC-
Q ss_conf 7303899840477411002-577643202552167478------99--723776533157640256741112203--53-
Q gi|254780548|r 280 EAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQI------VF--ESDREGKEQLYVMQSNGSDQKRISQDK--EA- 347 (447)
Q Consensus 280 g~~~I~~~d~~~~~~~~lT-~~~~~d~~p~~spDG~~I------~f--~Sdr~G~~qiy~~~~~g~~~~rlT~~~--~~- 347 (447)
....||.|||+-|++..=- -+..+- --+|.|..+.- .| .|+. -||++|..=.. .+|.... .|
T Consensus 496 ~~n~lYkMDle~gkvV~EW~~~d~~~-v~~~~p~~Kf~q~t~eqtf~G~s~n----~lfriDPRl~g-~Klv~~~~k~Y~ 569 (788)
T pfam08553 496 NKNKLYKMDLEYGKVVDEWKVSDDVP-VVQYAPTKKFAQMTAEQTFLGISHN----GVFRIDPRLSG-NKLVDSESKQYA 569 (788)
T ss_pred CCCCEEEEECCCCCEEEEEECCCCCC-EEEECCCCCCCCCCCCCEEEEECCC----CEEEECCCCCC-CCEECCCCCCCC
T ss_conf 98841786546786778822378875-0472476541014576526755477----24887775578-703403000114
Q ss_pred ---CEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCC--CCCEECCCCCEEEEEEEECCCCCEEEEEEE
Q ss_conf ---000046877688899997149915799998899967996627875--543788789989999950898733799998
Q gi|254780548|r 348 ---SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422 (447)
Q Consensus 348 ---~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~~~~--e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~ 422 (447)
.+...+ +-..-+||..+..| +|-++|.-|...+.+-.+-.+ -+-..|.|||+|+=+.. ..|.++|
T Consensus 570 skn~Fs~~a-Tt~~G~iAv~S~kG---diRLfDrlg~~AKT~lp~lGdpIigidvs~DGrwilaTck------tyLlLid 639 (788)
T pfam08553 570 SKNDFSALA-TTEKGYIAVASNKG---DIRLFDRLGINAKTAIPALGDPIIGIDVSADGRWLLATCK------TYLLLID 639 (788)
T ss_pred CCCCCCEEE-ECCCCEEEEEECCC---CEEEECCCCCHHHHCCCCCCCCEEEEEECCCCCEEEEEEE------EEEEEEE
T ss_conf 466542477-44885499850688---4686432473010038777996365675478818998700------2389876
Q ss_pred C---CCCCE
Q ss_conf 8---99714
Q gi|254780548|r 423 L---NGRNE 428 (447)
Q Consensus 423 ~---~G~~~ 428 (447)
+ +|++.
T Consensus 640 ~~~k~gkn~ 648 (788)
T pfam08553 640 TLIKDGKNA 648 (788)
T ss_pred CCCCCCCCC
T ss_conf 013577546
No 303
>pfam10626 TraO Conjugative transposon protein TraO. This is a family of conjugative transposon proteins.
Probab=55.70 E-value=2 Score=19.89 Aligned_cols=26 Identities=27% Similarity=0.368 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 99999999999998720213316999
Q gi|254780548|r 13 MKINLCLLLVLIGGFFPTSIHAFVKV 38 (447)
Q Consensus 13 m~~~l~l~l~l~~~~~~~~a~A~~~i 38 (447)
||+.+++++++++++++.+|+||-.+
T Consensus 1 MKk~~~i~~~~~l~l~~~~a~AQR~L 26 (193)
T pfam10626 1 MKRKLFIILLALLALFAGQAHAQRCL 26 (193)
T ss_pred CCEEEEEHHHHHHHHHCCHHHHHHHC
T ss_conf 96188608899999864988887647
No 304
>PRK10002 outer membrane protein F; Provisional
Probab=53.82 E-value=11 Score=14.94 Aligned_cols=23 Identities=22% Similarity=0.156 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 799999999999998720213316
Q gi|254780548|r 12 NMKINLCLLLVLIGGFFPTSIHAF 35 (447)
Q Consensus 12 ~m~~~l~l~l~l~~~~~~~~a~A~ 35 (447)
|||+.++.+++..+ +.+.++.|.
T Consensus 1 mMKK~~LA~ai~al-l~ag~a~AA 23 (362)
T PRK10002 1 MMKRNILAVIVPAL-LVAGTANAA 23 (362)
T ss_pred CCHHHHHHHHHHHH-HHHCCCCEE
T ss_conf 93087999999999-860644178
No 305
>KOG2695 consensus
Probab=53.63 E-value=11 Score=14.92 Aligned_cols=179 Identities=15% Similarity=0.201 Sum_probs=80.2
Q ss_pred EEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCC--
Q ss_conf 455768998489985034676443037711797179974379852444551589556774137873038998404774--
Q gi|254780548|r 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-- 293 (447)
Q Consensus 216 sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~-- 293 (447)
+-+||-+ .-+|- +.-+...++-+.+++||-..-.. .++..++-.|.--+ -|+|..-++| +|+.+||..+.
T Consensus 216 ~CawSln--i~gyh-fs~G~sqqv~L~nvetg~~qsf~--sksDVfAlQf~~s~-nLv~~GcRng--eI~~iDLR~rnqG 287 (425)
T KOG2695 216 SCAWSLN--IMGYH-FSVGLSQQVLLTNVETGHQQSFQ--SKSDVFALQFAGSD-NLVFNGCRNG--EIFVIDLRCRNQG 287 (425)
T ss_pred HHHHHHC--CCEEE-ECCCCCCEEEEEEEECCCCCCCC--CCHHHHHHHHCCCC-CEEEECCCCC--CEEEEEEEECCCC
T ss_conf 5663223--31120-01265423578984036421325--52037888861568-7367224678--4799983403568
Q ss_pred ----CCCCCCCCCCCCCEEEEC-CCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEE--ECCCCCEEEEEEC
Q ss_conf ----110025776432025521-674789972377653315764025674111220353000046--8776888999971
Q gi|254780548|r 294 ----TERLTNTLFINISASYSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAFTKF 366 (447)
Q Consensus 294 ----~~~lT~~~~~d~~p~~sp-DG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~--wSPdG~~Iaf~~~ 366 (447)
..+|-...++ ++-.--- +++.+. +||-.|.-.+|-..+--.+.---+++|..|...+. --..-+.++|+
T Consensus 288 ~~~~a~rlyh~Ssv-tslq~Lq~s~q~Lm-aS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s-- 363 (425)
T KOG2695 288 NGWCAQRLYHDSSV-TSLQILQFSQQKLM-ASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFS-- 363 (425)
T ss_pred CCCCEEEEECCCCH-HHHHHHCCCCCEEE-ECCCCCCEEEEEEHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEE--
T ss_conf 87631799737510-10023324663576-405767406744102231632155403136555553321655553887--
Q ss_pred CCCCEEEEEEECCCCCEEEEECCCCCCCCEECCCCCEEEEEEE
Q ss_conf 4991579999889996799662787554378878998999995
Q gi|254780548|r 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409 (447)
Q Consensus 367 ~~~~~~i~~~~~~g~~~~~lt~~~~~e~P~wSPDG~~i~f~~~ 409 (447)
.|.....-+..++.+. +|++...-+ +.-+-|+..+.|.+.
T Consensus 364 ~GdDcytRiWsl~~gh--Ll~tipf~~-s~~e~d~~sv~~~sr 403 (425)
T KOG2695 364 VGDDCYTRIWSLDSGH--LLCTIPFPY-SASEVDIPSVAFDSR 403 (425)
T ss_pred CCCEEEEEEEECCCCC--EEECCCCCC-CCCCCCCCCEEHHCC
T ss_conf 0673289888625673--454168887-563244461000110
No 306
>TIGR02814 pfaD_fam PfaD family protein; InterPro: IPR014179 The protein PfaD is part of a four-gene locus, similar to polyketide biosynthesis systems, which is responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. Several other members of the entry are found in loci presumed to act in polyketide biosyntheses per se..
Probab=53.49 E-value=4.2 Score=17.75 Aligned_cols=11 Identities=27% Similarity=0.326 Sum_probs=6.1
Q ss_pred HHHHHHHCCCC
Q ss_conf 99999750445
Q gi|254780548|r 160 DDIYQSITGEK 170 (447)
Q Consensus 160 d~i~~~ltG~~ 170 (447)
+.|+++|+.+.
T Consensus 157 ~~~L~~L~a~G 167 (449)
T TIGR02814 157 AAILQKLLAEG 167 (449)
T ss_pred HHHHHHHHHCC
T ss_conf 89999985338
No 307
>COG4831 Roadblock/LC7 domain [Function unknown]
Probab=52.08 E-value=8.7 Score=15.66 Aligned_cols=11 Identities=45% Similarity=0.878 Sum_probs=4.4
Q ss_pred EECCCCCEEEE
Q ss_conf 57689984899
Q gi|254780548|r 218 RFSPNQQKVAY 228 (447)
Q Consensus 218 ~wSpDG~~Iay 228 (447)
.|||||+-++|
T Consensus 19 efs~DGkLv~Y 29 (109)
T COG4831 19 EFSPDGKLVEY 29 (109)
T ss_pred EECCCCCEEEE
T ss_conf 05799716986
No 308
>COG2113 ProX ABC-type proline/glycine betaine transport systems, periplasmic components [Amino acid transport and metabolism]
Probab=51.87 E-value=12 Score=14.74 Aligned_cols=69 Identities=12% Similarity=-0.005 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCHHHC
Q ss_conf 7999999999999987202133169999715866420046305677530357899999986201751455086550
Q gi|254780548|r 12 NMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSF 87 (447)
Q Consensus 12 ~m~~~l~l~l~l~~~~~~~~a~A~~~i~It~~~~~pi~IAv~~f~~~~~~~~~i~~ii~~DL~~SG~F~~i~~~~~ 87 (447)
+|+.++|.+++++.+.....+ .--...-..+.||.+.++.....-.-...+| .+|-.+=.-..++...+
T Consensus 3 ~~~~~~~~~~~~~~~~~~a~~------a~~~~~~~tV~~a~~~W~s~~~~t~v~~~iL-k~~Gy~v~~~~~~~~~~ 71 (302)
T COG2113 3 KLLALLAAVAAAALLAAAAAA------AAAAEAGKTVRIADVGWTSGTATTNVAKKIL-KGLGYTVELVTLDTAVM 71 (302)
T ss_pred HHHHHHHHHHHHHHHHHHCCC------CCCCCCCCEEEEEECCCCHHHHHHHHHHHHH-HHCCCCCEEEECCHHHH
T ss_conf 389999999999998622001------1134558825884369617899999999999-96799624665559999
No 309
>PRK10064 colicin I receptor; Provisional
Probab=51.76 E-value=9.1 Score=15.51 Aligned_cols=57 Identities=14% Similarity=0.283 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCE--EEEEEECCCCCC------CEEEEECCCCCCCC-HHHHHHHHHHH
Q ss_conf 9999999999999872021331--699997158664------20046305677530-35789999998
Q gi|254780548|r 13 MKINLCLLLVLIGGFFPTSIHA--FVKVATNSANYS------PVSIAFTKFVSIDE-LGGKVSEVVSK 71 (447)
Q Consensus 13 m~~~l~l~l~l~~~~~~~~a~A--~~~i~It~~~~~------pi~IAv~~f~~~~~-~~~~i~~ii~~ 71 (447)
.|+.|||+++.+ .++..|.. ..+|.+|..... |..|-|..-+.... ....++++++.
T Consensus 8 ~~~~~~~~~~~~--~~~~~a~~~~~e~vVVTatr~~~~~~~tp~sVtVIt~e~i~~~~~~~l~d~L~~ 73 (663)
T PRK10064 8 VRVGLCLSAISC--AWPVAAVDDDGETMVVTASSVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKE 73 (663)
T ss_pred HHHHHHHHHHHH--CCCHHHCCCCCCEEEEECCCCCCCHHHCCCCEEEECHHHHHHHCCCCHHHHHHH
T ss_conf 999999999986--364012126998399923588478788897579989999976089889999852
No 310
>KOG0379 consensus
Probab=51.36 E-value=12 Score=14.69 Aligned_cols=107 Identities=17% Similarity=0.098 Sum_probs=42.2
Q ss_pred CEEEEEECCCCCEEEEEEECCCCCEEEEEE----CCCCCEEEE---EEECCCCCCCCCEEEECCCCCEEEEECC--CCCE
Q ss_conf 100123114554026886217640234557----689984899---8503467644303771179717997437--9852
Q gi|254780548|r 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRF----SPNQQKVAY---ATYDDEDILRVYLMDTRIDRAPKRIGNF--RSMI 260 (447)
Q Consensus 190 ~~~l~i~d~DG~n~~~l~~~~~~~~~sP~w----SpDG~~Iay---~s~~~~~~~~i~~~~~~~g~~~~~~~~~--~~~~ 260 (447)
..+|+..|.+=..-..+....+. -.|++ .-.|+++.. ........-++|++|+.+..=.+..+.. |.--
T Consensus 138 ~~el~~~d~~t~~W~~l~~~~~~--P~~r~~Hs~~~~g~~l~vfGG~~~~~~~~ndl~i~d~~~~~W~~~~~~g~~P~pR 215 (482)
T KOG0379 138 LNELHSLDLSTRTWSLLSPTGDP--PPPRAGHSATVVGTKLVVFGGIGGTGDSLNDLHIYDLETSTWSELDTQGEAPSPR 215 (482)
T ss_pred CCCEEEEECCCCEEEEECCCCCC--CCCCCCEEEEEECCEEEEECCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCC
T ss_conf 66349887688608985786889--9875642799989999998982788876132688755877347710479898987
Q ss_pred EEEEECCCCCEEEEEECCC----CCEEEEEEECCCCCCCCCC
Q ss_conf 4445515895567741378----7303899840477411002
Q gi|254780548|r 261 LAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLT 298 (447)
Q Consensus 261 ~~p~wSPDG~~la~~~s~~----g~~~I~~~d~~~~~~~~lT 298 (447)
.+++..-.+.++......+ ...|+|.+|+.+...+++-
T Consensus 216 ~gH~~~~~~~~~~v~gG~~~~~~~l~D~~~ldl~~~~W~~~~ 257 (482)
T KOG0379 216 YGHAMVVVGNKLLVFGGGDDGDVYLNDVHILDLSTWEWKLLP 257 (482)
T ss_pred CCCEEEEECCEEEEEECCCCCCCCCCCEEEEECCCCEEEECC
T ss_conf 773389988868999445667731153354214544556336
No 311
>PRK13684 Ycf48-like protein; Provisional
Probab=50.71 E-value=12 Score=14.62 Aligned_cols=25 Identities=32% Similarity=0.373 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 1445677767999999999999987
Q gi|254780548|r 3 LRFFIAEELNMKINLCLLLVLIGGF 27 (447)
Q Consensus 3 ~~~f~~~~~~m~~~l~l~l~l~~~~ 27 (447)
|+.|++....+.+.+++.++|..|.
T Consensus 1 m~~~~~~~~~l~l~~~~~~~~~~c~ 25 (333)
T PRK13684 1 MKRLLKSLLNLLLLLALGLVLSGCS 25 (333)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 9268888999999999998632235
No 312
>PRK13861 type IV secretion system protein VirB9; Provisional
Probab=50.60 E-value=8.4 Score=15.76 Aligned_cols=27 Identities=15% Similarity=0.333 Sum_probs=13.1
Q ss_pred CCCEEEEEECC-CCCCCEEEEEECCCCC
Q ss_conf 67478997237-7653315764025674
Q gi|254780548|r 312 DSSQIVFESDR-EGKEQLYVMQSNGSDQ 338 (447)
Q Consensus 312 DG~~I~f~Sdr-~G~~qiy~~~~~g~~~ 338 (447)
||+.-+|.=+- .--|.||+++.+|.+.
T Consensus 205 DGrfTy~~F~~~~~iPaif~V~~dG~E~ 232 (293)
T PRK13861 205 NGYSTVFRFPGNVRIPSIYTINPDGKEA 232 (293)
T ss_pred CCEEEEEECCCCCCCCCEEEECCCCCEE
T ss_conf 8938999837998678679999999686
No 313
>pfam05096 Glu_cyclase_2 Glutamine cyclotransferase. This family of enzymes EC:2.3.2.5 catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.
Probab=50.52 E-value=12 Score=14.60 Aligned_cols=183 Identities=12% Similarity=0.110 Sum_probs=76.8
Q ss_pred ECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCC-CC
Q ss_conf 76899848998503467644303771179717997437985244455158955677413787303899840477411-00
Q gi|254780548|r 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RL 297 (447)
Q Consensus 219 wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~-~l 297 (447)
|-+||. .|.|--.-+...|..+++.+|+..+.. ..+...++---.--+.+|...-.+.+. .|++|.++-+.. ..
T Consensus 52 f~~dg~--l~ESTGlyG~S~ir~~d~~tg~v~~~~-~L~~~~FgEGiT~~~d~i~qLTWk~~~--~fvyd~~tl~~~~~f 126 (264)
T pfam05096 52 YLNNGH--ILESTGRYGFSKVRVYDLTQEIFSEKI-AFPDTVFGEGLTVVEDYVYLLTWKDGV--AYKYDKATFNCLGAY 126 (264)
T ss_pred ECCCCE--EEEECCCCCCEEEEEEECCCCCEEEEE-ECCHHCCEEEEEEECCEEEEEEECCCE--EEEECCCCCEEEEEE
T ss_conf 848997--999589998565799978988699999-678000200079989999999951782--799727553487677
Q ss_pred C---CCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCC-E--EEEECC--CCEEEEEECCCCCEEEEEECCCC
Q ss_conf 2---57764320255216747899723776533157640256741-1--122035--30000468776888999971499
Q gi|254780548|r 298 T---NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-R--ISQDKE--ASYFDPVWSPQGDLIAFTKFSGE 369 (447)
Q Consensus 298 T---~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~-r--lT~~~~--~~~~~p~wSPdG~~Iaf~~~~~~ 369 (447)
+ .+.|+ ..||++|+ .|| |+.+||.+|.++-+.. + +|.++. .+...-.|- +|.-.|-+.+.+
T Consensus 127 ~y~gEGWGL------t~dg~~Li-~SD--GS~~L~f~dp~tf~~~~~i~Vt~~g~pv~~LNELE~v-~G~IyANVW~td- 195 (264)
T pfam05096 127 PYEGEGWGL------TKDNKCLW-MSS--GTAFLQKRDPKTFALLDTVQVTDEGVPVSMLNELEYV-DGYLYANVWQTN- 195 (264)
T ss_pred CCCCCEEEE------EECCCEEE-EEC--CCCCEEEECCCCCCEEEEEEEEECCEECCCCEEEEEE-CCEEEEEECCCC-
T ss_conf 368960667------00799999-978--8310399888644278999999899544440558998-589999964764-
Q ss_pred CEEEEEEECCCCCEEEEEC-CCC-------------CC---CCEECCCCCEEEEEEEECCCCCEEEEEEEC
Q ss_conf 1579999889996799662-787-------------55---437887899899999508987337999988
Q gi|254780548|r 370 KFAIGVMKKDGSQERLLVE-DSN-------------LQ---APTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423 (447)
Q Consensus 370 ~~~i~~~~~~g~~~~~lt~-~~~-------------~e---~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~ 423 (447)
.|.++|+.+|.+.-+-+ .+. ++ .-.|-|+.+.+ |. .|+..+.+|.+.+
T Consensus 196 --~Iv~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l-~V---TGK~Wp~lfeIkl 260 (264)
T pfam05096 196 --RIARIQPDTGKVVAWIDISPLLKELNLDKSHYPDDDVLNGIAHDLDQQRL-LI---TGKLWPLLFEVKL 260 (264)
T ss_pred --EEEEEECCCCEEEEEEECHHCHHHHCCCCCCCCCCCEEEEEEECCCCCEE-EE---EECCCCCCEEEEE
T ss_conf --59999799975999998222500213232448888546753070999989-99---8478996289999
No 314
>TIGR01059 gyrB DNA gyrase, B subunit; InterPro: IPR011557 DNA topoisomerases regulate the number of topological links between two DNA strands (i.e. change the number of superhelical turns) by catalysing transient single- or double-strand breaks, crossing the strands through one another, then resealing the breaks. These enzymes have several functions: to remove DNA supercoils during transcription and DNA replication; for strand breakage during recombination; for chromosome condensation; and to disentangle intertwined DNA during mitosis , . DNA topoisomerases are divided into two classes: type I enzymes (5.99.1.2 from EC; topoisomerases I, III and V) break single-strand DNA, and type II enzymes (5.99.1.3 from EC; topoisomerases II, IV and VI) break double-strand DNA . Type II topoisomerases are ATP-dependent enzymes, and can be subdivided according to their structure and reaction mechanisms: type IIA (topoisomerase II or gyrase, and topoisomerase IV) and type IIB (topoisomerase VI). These enzymes are responsible for relaxing supercoiled DNA as well as for introducing both negative and positive supercoils . Topoisomerase II (called gyrase in bacteria) primarily introduces negative supercoils into DNA. In bacteria, topoisomerase II consists of two polypeptide subunits, gyrA and gyrB, which form a heterotetramer: (BA)2. In most eukaryotes, topoisomerase II consists of a single polypeptide, where the N- and C-terminal regions correspond to gyrB and gyrA, respectively. This entry represents the B subunit (gyrB) as found predominantly in bacteria, but does not include the topoisomerase II enzymes composed of a single polypeptide, as are found in most eukaryotes. GyrB has two functional domains: an N-terminal ATPase and a C-terminal responsible for subunit interactions, the latter differing between subunit B and single polypeptide topoisomerase II . More information about this protein can be found at Protein of the Month: DNA Topoisomerase .; GO: 0003677 DNA binding, 0003918 DNA topoisomerase (ATP-hydrolyzing) activity, 0005524 ATP binding, 0006265 DNA topological change, 0005694 chromosome.
Probab=49.90 E-value=3.8 Score=18.08 Aligned_cols=37 Identities=24% Similarity=0.387 Sum_probs=21.1
Q ss_pred EEEEECCCCCCCCHHHHH--HHHHHHHHHCCCCEEECCHHHCC
Q ss_conf 004630567753035789--99999862017514550865503
Q gi|254780548|r 48 VSIAFTKFVSIDELGGKV--SEVVSKDLQRSDVFNLISQDSFK 88 (447)
Q Consensus 48 i~IAv~~f~~~~~~~~~i--~~ii~~DL~~SG~F~~i~~~~~~ 88 (447)
|||.|=|-+|.. .+.++ .++|-.=|.-=|.|+ .++|.
T Consensus 74 IPVdIHp~eGak-qGRe~SA~EvVlT~LHAGGKFD---~~sYK 112 (818)
T TIGR01059 74 IPVDIHPEEGAK-QGREISAVEVVLTVLHAGGKFD---KDSYK 112 (818)
T ss_pred CCCCCCCCCCCC-CCCCCCCEEEEEEEECCCEEEC---CCCEE
T ss_conf 874306768787-8885660001220005750015---88047
No 315
>PRK11385 hypothetical protein; Provisional
Probab=49.22 E-value=11 Score=15.09 Aligned_cols=36 Identities=22% Similarity=0.483 Sum_probs=13.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHCC--CCC--CCCCCEEE
Q ss_conf 2337778899999998999997504--455--55441788
Q gi|254780548|r 144 FFSSPASWRKIAHTISDDIYQSITG--EKG--DFNSRILF 179 (447)
Q Consensus 144 ~~~~~~~~R~~ah~~ad~i~~~ltG--~~G--~f~triaf 179 (447)
|.-....|.+++-.+.-.+.-.+.+ ..| .-.|||+|
T Consensus 7 ~~~~~~~~~r~~~~i~~~~~ll~s~~a~Agv~l~~TRvIy 46 (245)
T PRK11385 7 YFIMTNTWNRLALLIFAVLSLLVAGELQAGVVVGGTRFIF 46 (245)
T ss_pred EEEEEHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEE
T ss_conf 9987006899999999999999865400308978758997
No 316
>PRK03757 hypothetical protein; Provisional
Probab=49.11 E-value=12 Score=14.71 Aligned_cols=28 Identities=29% Similarity=-0.007 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCCE-EEEEEE
Q ss_conf 9999999999999872021331-699997
Q gi|254780548|r 13 MKINLCLLLVLIGGFFPTSIHA-FVKVAT 40 (447)
Q Consensus 13 m~~~l~l~l~l~~~~~~~~a~A-~~~i~I 40 (447)
||+.+.++++++.++.+.+|.| ...||.
T Consensus 1 mkk~~l~~~l~a~~~~~~~A~a~~y~iDp 29 (191)
T PRK03757 1 MKKTLLGLTLGSLLFSAGSAVAADYKIDK 29 (191)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCEEECC
T ss_conf 90439999999998630404575278889
No 317
>COG4509 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=48.59 E-value=13 Score=14.52 Aligned_cols=13 Identities=15% Similarity=0.291 Sum_probs=9.8
Q ss_pred CCHHHHHHHHHHH
Q ss_conf 9414456777679
Q gi|254780548|r 1 MSLRFFIAEELNM 13 (447)
Q Consensus 1 ~~~~~f~~~~~~m 13 (447)
|||++|++.+..+
T Consensus 1 m~mkrfl~~~~tL 13 (244)
T COG4509 1 MMMKRFLKLSDTL 13 (244)
T ss_pred CCHHHHHHHHHHH
T ss_conf 9089999887788
No 318
>pfam03900 Porphobil_deamC Porphobilinogen deaminase, C-terminal domain.
Probab=47.08 E-value=14 Score=14.25 Aligned_cols=43 Identities=7% Similarity=0.149 Sum_probs=32.1
Q ss_pred CCEEEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 62257899984155542000023233777889999999899999
Q gi|254780548|r 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164 (447)
Q Consensus 121 ~~~~~v~~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~ 164 (447)
++++.++..+++. .|+.++..+..+..++...++.++++++.+
T Consensus 30 ~~~i~l~~~v~s~-DG~~~~~~~~~g~~~~a~~lG~~lA~~Ll~ 72 (74)
T pfam03900 30 DGNLRLKGLVGSP-DGTRVFEIEVRGDIEDAEELGKKLAEELLA 72 (74)
T ss_pred CCEEEEEEEEECC-CCCEEEEEEEEECHHHHHHHHHHHHHHHHH
T ss_conf 9999999999989-898899999998589999999999999996
No 319
>pfam05090 VKG_Carbox Vitamin K-dependent gamma-carboxylase. Using reduced vitamin K, oxygen, and carbon dioxide, gamma-glutamyl carboxylase post-translationally modifies certain glutamates by adding carbon dioxide to the gamma position of those amino acids. In vertebrates, the modification of glutamate residues of target proteins is facilitated by an interaction between a propeptide present on target proteins and the gamma-glutamyl carboxylase.
Probab=45.50 E-value=13 Score=14.54 Aligned_cols=23 Identities=26% Similarity=0.122 Sum_probs=11.7
Q ss_pred EECCCCCEEEEEEECCCCCCCCC
Q ss_conf 41378730389984047741100
Q gi|254780548|r 275 SVQKDEAMDIYSVDLQSNATERL 297 (447)
Q Consensus 275 ~~s~~g~~~I~~~d~~~~~~~~l 297 (447)
..+++|...+.+.|.++|+..-+
T Consensus 343 L~eK~g~~~f~V~D~~Tg~~~~v 365 (446)
T pfam05090 343 LHSKSGHASFTVVDGQTGETGYL 365 (446)
T ss_pred EEEECEEEEEEEECCCCCCEEEE
T ss_conf 65303068999984888847987
No 320
>PRK11528 hypothetical protein; Provisional
Probab=45.41 E-value=7.9 Score=15.93 Aligned_cols=23 Identities=22% Similarity=0.124 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 99999999999998720213316
Q gi|254780548|r 13 MKINLCLLLVLIGGFFPTSIHAF 35 (447)
Q Consensus 13 m~~~l~l~l~l~~~~~~~~a~A~ 35 (447)
|||.|+.+.++..+..+.+|+|+
T Consensus 1 m~K~ll~ls~~~~~~~~~~a~ae 23 (254)
T PRK11528 1 MRKSLLALSLLATLALAAPAQAE 23 (254)
T ss_pred CCHHHHHHHHHHHHCCCCCCCHH
T ss_conf 94124568999873156642045
No 321
>PRK09465 tolC outer membrane channel protein; Reviewed
Probab=45.06 E-value=11 Score=14.92 Aligned_cols=23 Identities=35% Similarity=0.173 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 99999999999998720213316
Q gi|254780548|r 13 MKINLCLLLVLIGGFFPTSIHAF 35 (447)
Q Consensus 13 m~~~l~l~l~l~~~~~~~~a~A~ 35 (447)
||+++.+++.++++.++.+++|.
T Consensus 1 mkki~~~l~~l~l~~~~~~a~a~ 23 (446)
T PRK09465 1 MKKLLPLLIGLSLAGFSSASQAE 23 (446)
T ss_pred CCHHHHHHHHHHHHHCCHHCHHC
T ss_conf 94299999999998613112122
No 322
>PRK10653 D-ribose transporter subunit RbsB; Provisional
Probab=44.29 E-value=15 Score=13.97 Aligned_cols=90 Identities=11% Similarity=0.127 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHHHHH-HCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCHHHCCC
Q ss_conf 67999999999999987-20213316999971586642004630567753035789999998620175145508655034
Q gi|254780548|r 11 LNMKINLCLLLVLIGGF-FPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89 (447)
Q Consensus 11 ~~m~~~l~l~l~l~~~~-~~~~a~A~~~i~It~~~~~pi~IAv~~f~~~~~~~~~i~~ii~~DL~~SG~F~~i~~~~~~~ 89 (447)
|+||+.+++++.+..+. ++..+.|.- -|.+.++.+.+ ..-.++.+=+..-+...|+--++-.+. .
T Consensus 1 ~~~~k~~~~~~~~~~~~~~~a~a~a~~----------TIgvivp~i~n--pff~~v~~gie~~a~~~Gy~l~v~~s~--~ 66 (295)
T PRK10653 1 MNMKKLATLVSAVALSATVSANAMAKD----------TIALVVSTLNN--PFFVSLKDGAQKEADKLGYNLVVLDSQ--N 66 (295)
T ss_pred CCHHHHHHHHHHHHHHHHCCCHHHCCC----------EEEEEECCCCC--HHHHHHHHHHHHHHHHCCCEEEEEECC--C
T ss_conf 970799999999987652121775299----------79999489879--799999999999999769989998399--9
Q ss_pred CCCCCCCCCCHHHHHHCCCCEEEEEEE
Q ss_conf 667611145778874156218999997
Q gi|254780548|r 90 KITNPDSIPRFQDWNSLGAQVLVTGRV 116 (447)
Q Consensus 90 ~~~~~~~~~~f~~W~~~gad~lv~G~i 116 (447)
.+ ..+....++....++|.++....
T Consensus 67 d~--~~q~~~i~~li~~~vdgiii~p~ 91 (295)
T PRK10653 67 NP--AKELANVQDLTVRGTKILLINPT 91 (295)
T ss_pred CH--HHHHHHHHHHHHCCCCEEEECCC
T ss_conf 99--99999999999769988998477
No 323
>pfam03888 MucB_RseB MucB/RseB family. Members of this family are regulators of the anti-sigma E protein RseD.
Probab=44.05 E-value=12 Score=14.65 Aligned_cols=23 Identities=26% Similarity=0.075 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 99999999999998720213316
Q gi|254780548|r 13 MKINLCLLLVLIGGFFPTSIHAF 35 (447)
Q Consensus 13 m~~~l~l~l~l~~~~~~~~a~A~ 35 (447)
||+++++.+++..++.+.++.|+
T Consensus 1 ~~~~~~~~~~~~~l~~~~~a~a~ 23 (314)
T pfam03888 1 MKKLKSLTLLLGSLLASPTAQAE 23 (314)
T ss_pred CCHHHHHHHHHHHHHCCCCCCCC
T ss_conf 92588799999987357333466
No 324
>COG2133 Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism]
Probab=43.13 E-value=16 Score=13.86 Aligned_cols=58 Identities=17% Similarity=0.339 Sum_probs=29.6
Q ss_pred EEECCCCCEEEEEEECCCCCEEEEECC------CCCCCCEECCCCCEEEEEEEECCCCCEEEEEEECCC
Q ss_conf 997149915799998899967996627------875543788789989999950898733799998899
Q gi|254780548|r 363 FTKFSGEKFAIGVMKKDGSQERLLVED------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425 (447)
Q Consensus 363 f~~~~~~~~~i~~~~~~g~~~~~lt~~------~~~e~P~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G 425 (447)
|+...+.. .+..++++++.+..++.- +.-......|||. |+.+.+. + ..+||.+...+
T Consensus 335 fV~~hgsw-~~~~~~~~g~~~~~~~~fl~~d~~gR~~dV~v~~DGa-llv~~D~-~--~g~i~Rv~~~~ 398 (399)
T COG2133 335 FVGAHGSW-PVLRLRPDGNYKVVLTGFLSGDLGGRPRDVAVAPDGA-LLVLTDQ-G--DGRILRVSYAG 398 (399)
T ss_pred EEEEECCE-EEEEECCCCCCCEEEEEEEECCCCCCCCCEEECCCCE-EEEEECC-C--CCEEEEECCCC
T ss_conf 89851561-6788656888526777788258897421159889971-9995548-7--98599846788
No 325
>TIGR02636 galM_Leloir galactose mutarotase; InterPro: IPR013458 Galactose mutarotases (D-galactose 1-epimerase) participate in the Leloir pathway for galactose/glucose interconversion. Genes encoding the proteins found in this entry are found clustered with genes encoding other enzymes of the Leloir pathway. These proteins belong to the aldose 1-epimerase family. However, the aldose 1-epimerase itself (5.1.3.3 from EC) has a relatively broad specificity and can utilise D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose. The restricted genomic context of the genes suggests members should act primarily on D-galactose.; GO: 0004034 aldose 1-epimerase activity, 0006012 galactose metabolic process.
Probab=41.64 E-value=17 Score=13.71 Aligned_cols=31 Identities=19% Similarity=0.413 Sum_probs=14.5
Q ss_pred EEEEECCCCCEEE-EEEE-CCCCCCCCCCCCCC
Q ss_conf 6774137873038-9984-04774110025776
Q gi|254780548|r 272 ALISVQKDEAMDI-YSVD-LQSNATERLTNTLF 302 (447)
Q Consensus 272 la~~~s~~g~~~I-~~~d-~~~~~~~~lT~~~~ 302 (447)
|-|+++.+....| |..- .+-..+--||+|-+
T Consensus 139 V~Y~LT~~N~~~I~Y~A~DtDk~Tp~NlTNHvY 171 (346)
T TIGR02636 139 VTYTLTDDNELKIEYEATDTDKATPVNLTNHVY 171 (346)
T ss_pred EEEEECCCCEEEEEEEEECCCCCCCCCCCCCEE
T ss_conf 999988884699999887137657658873301
No 326
>PRK10260 hypothetical protein; Provisional
Probab=41.61 E-value=17 Score=13.70 Aligned_cols=26 Identities=19% Similarity=0.161 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 67999999999999987202133169
Q gi|254780548|r 11 LNMKINLCLLLVLIGGFFPTSIHAFV 36 (447)
Q Consensus 11 ~~m~~~l~l~l~l~~~~~~~~a~A~~ 36 (447)
|+|++.-++.++|+..+|+.+|.|..
T Consensus 1 ~~~~~~~~~~~~~~~~~f~~~a~A~~ 26 (306)
T PRK10260 1 MNMKLKTLFAAAFAVVGFCSTASAVT 26 (306)
T ss_pred CCCCHHHHHHHHHHHHHHCCHHHCEE
T ss_conf 95209999999999998576102016
No 327
>PRK11627 hypothetical protein; Provisional
Probab=41.53 E-value=17 Score=13.70 Aligned_cols=21 Identities=19% Similarity=0.128 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHCCCCEEEC
Q ss_conf 3578999999862017514550
Q gi|254780548|r 61 LGGKVSEVVSKDLQRSDVFNLI 82 (447)
Q Consensus 61 ~~~~i~~ii~~DL~~SG~F~~i 82 (447)
+-..+.++++.+|..-|+ .+-
T Consensus 76 l~~~lq~~l~~ql~sqG~-~i~ 96 (192)
T PRK11627 76 LRFLLQEVLEKQMTARGY-MIG 96 (192)
T ss_pred HHHHHHHHHHHHHHHCCE-EEC
T ss_conf 899999999999985881-715
No 328
>KOG1188 consensus
Probab=41.26 E-value=17 Score=13.67 Aligned_cols=108 Identities=16% Similarity=0.197 Sum_probs=56.0
Q ss_pred CEEEEEEECCCCCCCCCEEEECCCCC-EEEE-ECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCC---C
Q ss_conf 84899850346764430377117971-7997-43798524445515895567741378730389984047741100---2
Q gi|254780548|r 224 QKVAYATYDDEDILRVYLMDTRIDRA-PKRI-GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL---T 298 (447)
Q Consensus 224 ~~Iay~s~~~~~~~~i~~~~~~~g~~-~~~~-~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~l---T 298 (447)
+-|+--+-..+....++++|.+..+. .+.+ .++..-.....|.|..-.++.+.+.||..+||-..-+ .+...| -
T Consensus 130 ~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d-~EeDaL~~vi 208 (376)
T KOG1188 130 NIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKD-NEEDALLHVI 208 (376)
T ss_pred CEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCEEEEECCCCEEEEEECCCC-CCHHHHHHHH
T ss_conf 758705300167337999972135433555544226762368963799875775045644786545789-5055687754
Q ss_pred CCCC-CCCCEEEECCC-CEEEEEECCCCCCCEEEEEECCC
Q ss_conf 5776-43202552167-47899723776533157640256
Q gi|254780548|r 299 NTLF-INISASYSPDS-SQIVFESDREGKEQLYVMQSNGS 336 (447)
Q Consensus 299 ~~~~-~d~~p~~spDG-~~I~f~Sdr~G~~qiy~~~~~g~ 336 (447)
++.+ | ....|..+| ++|.-.+.-. . .+..+++-+
T Consensus 209 N~~sSI-~~igw~~~~ykrI~clTH~E-t--f~~~ele~~ 244 (376)
T KOG1188 209 NHGSSI-HLIGWLSKKYKRIMCLTHME-T--FAIYELEDG 244 (376)
T ss_pred CCCCEE-EEEEEECCCCCEEEEEECCC-C--EEEEECCCC
T ss_conf 034503-56664057752699997027-4--567771679
No 329
>KOG1064 consensus
Probab=40.80 E-value=17 Score=13.62 Aligned_cols=41 Identities=22% Similarity=0.211 Sum_probs=14.7
Q ss_pred CCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCC
Q ss_conf 1100257764320255216747899723776533157640256
Q gi|254780548|r 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336 (447)
Q Consensus 294 ~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~ 336 (447)
++|+|.|+..-.--+=+-||.-=.|-+.+ ..|++..+..|.
T Consensus 2211 v~r~~sHp~~~~Yltgs~dgsv~~~~w~~--~~~v~~~rt~g~ 2251 (2439)
T KOG1064 2211 VRRMTSHPSDPYYLTGSQDGSVRMFEWGH--GQQVVCFRTAGN 2251 (2439)
T ss_pred EEEECCCCCCCEEEECCCCCEEEEEECCC--CCEEEEEECCCC
T ss_conf 01104788775577337873389876068--970787532676
No 330
>pfam09839 DUF2066 Uncharacterized protein conserved in bacteria (DUF2066). This domain, found in various prokaryotic proteins, has no known function.
Probab=40.76 E-value=17 Score=13.62 Aligned_cols=30 Identities=17% Similarity=0.153 Sum_probs=17.2
Q ss_pred EEEECCCCCEEEEEEECCCCCEEEEEECCCCCEE
Q ss_conf 1231145540268862176402345576899848
Q gi|254780548|r 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226 (447)
Q Consensus 193 l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~I 226 (447)
...+.+|+.-.+.+++..+ -|.|..+--.+
T Consensus 74 ~L~v~Fd~~~i~~lL~~a~----lpvW~~~RP~v 103 (234)
T pfam09839 74 TLKVSFDPQAVNRLLRQAG----LPVWGANRPLV 103 (234)
T ss_pred EEEEEECHHHHHHHHHHCC----CCCCCCCCCCE
T ss_conf 9999988999999999859----99567889837
No 331
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=40.05 E-value=18 Score=13.55 Aligned_cols=75 Identities=11% Similarity=0.066 Sum_probs=42.2
Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEEECCCCEEEE
Q ss_conf 20046305677530357899999986201751455086550346676111457788741562189999974046622578
Q gi|254780548|r 47 PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126 (447)
Q Consensus 47 pi~IAv~~f~~~~~~~~~i~~ii~~DL~~SG~F~~i~~~~~~~~~~~~~~~~~f~~W~~~gad~lv~G~i~~~~~~~~~v 126 (447)
|..|+|.|... . ..+.+.-|...|...|+--.++... ......+..|...|+.|++.-.-....++.+.+
T Consensus 1 P~QV~Iipi~~-~--~~~ya~~i~~~Lr~~girv~~D~~~-------~~lg~ki~~a~~~~ip~~iiiG~~E~~~~~v~v 70 (91)
T cd00860 1 PVQVVVIPVTD-E--HLDYAKEVAKKLSDAGIRVEVDLRN-------EKLGKKIREAQLQKIPYILVVGDKEVETGTVSV 70 (91)
T ss_pred CEEEEEEEECH-H--HHHHHHHHHHHHHHCCCEEEEECCC-------CCHHHHHHHHHHHCCCEEEEECHHHHHCCEEEE
T ss_conf 92899998888-7--9999999999999889989996588-------987599999998199989999604653897999
Q ss_pred EEEEECC
Q ss_conf 9998415
Q gi|254780548|r 127 EFRLWDV 133 (447)
Q Consensus 127 ~~~L~dv 133 (447)
+-.+.
T Consensus 71 --r~r~~ 75 (91)
T cd00860 71 --RTRDG 75 (91)
T ss_pred --EECCC
T ss_conf --99899
No 332
>COG5497 Predicted secreted protein [Function unknown]
Probab=39.88 E-value=18 Score=13.53 Aligned_cols=29 Identities=34% Similarity=0.710 Sum_probs=16.1
Q ss_pred EECCCCCEEEEEEECCCC-----CCCCCEEEECC
Q ss_conf 576899848998503467-----64430377117
Q gi|254780548|r 218 RFSPNQQKVAYATYDDED-----ILRVYLMDTRI 246 (447)
Q Consensus 218 ~wSpDG~~Iay~s~~~~~-----~~~i~~~~~~~ 246 (447)
-|||||+..+|--|.-.+ ...+|.+|..+
T Consensus 28 GFS~dG~~Faf~~yG~~dG~g~~ys~~y~vd~~~ 61 (228)
T COG5497 28 GFSPDGRYFAFAEYGEQDGLGFPYSKIYVVDTSE 61 (228)
T ss_pred EECCCCCEEEEHHCCCCCCCCCCEEEEEEEECCC
T ss_conf 2666898885011043467887557899971332
No 333
>KOG0290 consensus
Probab=39.69 E-value=18 Score=13.51 Aligned_cols=261 Identities=14% Similarity=0.220 Sum_probs=113.3
Q ss_pred HHHHHC--CCCEEEEEEEEECCCCEEEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
Q ss_conf 887415--621899999740466225789998415554200002323377788999999989999975044555544178
Q gi|254780548|r 101 QDWNSL--GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178 (447)
Q Consensus 101 ~~W~~~--gad~lv~G~i~~~~~~~~~v~~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~f~tria 178 (447)
.+|+.. .-+.|..|++..+.++++.+ --.|-.++..+-.-+|.. -+--|||.
T Consensus 50 ~~Ws~~~~~~~rla~gS~~Ee~~Nkvqi--v~ld~~s~e~~~~a~fd~------------------------~YP~tK~~ 103 (364)
T KOG0290 50 MNWSVRPDKKFRLAVGSFIEEYNNKVQI--VQLDEDSGELVEDANFDH------------------------PYPVTKLM 103 (364)
T ss_pred ECCCCCCCCCEEEEEEEECCCCCCEEEE--EEECCCCCCEECCCCCCC------------------------CCCCCCEE
T ss_conf 1233577765058776400036770589--997066773542468888------------------------78862147
Q ss_pred EEEECCC-------CCCCCEEEEEECCCCCEEEE--EEE-CCCC----CEEEEEEC-CCCCEEEEEEECCCCCCCCCEEE
Q ss_conf 8751367-------64421001231145540268--862-1764----02345576-89984899850346764430377
Q gi|254780548|r 179 FVSESVV-------SGIIKNSLCVMDRDGANIRY--LTP-SRDQ----ILFEPRFS-PNQQKVAYATYDDEDILRVYLMD 243 (447)
Q Consensus 179 fv~~~~~-------~~~~~~~l~i~d~DG~n~~~--l~~-~~~~----~~~sP~wS-pDG~~Iay~s~~~~~~~~i~~~~ 243 (447)
|+-.+.+ +....-+||-.+.|-.+.+. ++. ..+. .+-|--|. -|-+.|.-.|- .-..-|| |
T Consensus 104 wiPd~~g~~pdlLATs~D~LRlWri~~e~~~~~~~~~Ln~nkns~~~aPLTSFDWne~dp~~igtSSi--DTTCTiW--d 179 (364)
T KOG0290 104 WIPDSKGVYPDLLATSSDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSI--DTTCTIW--D 179 (364)
T ss_pred ECCCCCCCCCCHHHCCCCEEEEEECCCCCCCEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECC--CCEEEEE--E
T ss_conf 63774566742321365717888614766753033232257565467765411034477664675014--6707998--8
Q ss_pred ECCCC---CEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCC--------------CCCCCCCCC-CCC
Q ss_conf 11797---179974379852444551589556774137873038998404774--------------110025776-432
Q gi|254780548|r 244 TRIDR---APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA--------------TERLTNTLF-INI 305 (447)
Q Consensus 244 ~~~g~---~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~--------------~~~lT~~~~-~d~ 305 (447)
+++|. ...++..++...+.-+|+-+|..+..+...||.-.+| ||...+ +.||.-++. .+.
T Consensus 180 ie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmF--DLR~leHSTIIYE~p~~~~pLlRL~wnkqDpny 257 (364)
T KOG0290 180 IETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMF--DLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNY 257 (364)
T ss_pred EEECCCCCEEEEEEECCCCEEEEEECCCCCCEEEEECCCCCEEEE--EECCCCCCEEEECCCCCCCCCEEECCCCCCCHH
T ss_conf 750556523568873476036766426872057995478837888--723554433785599888730340468678168
Q ss_pred CEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCC----
Q ss_conf 0255216747899723776533157640256741112203530000468776888999971499157999988999----
Q gi|254780548|r 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS---- 381 (447)
Q Consensus 306 ~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~---- 381 (447)
-++|.-|+.+++ |--+..-+..+-+|- +..+....-+|.|-...-.-+..++ .+.-+.|+..-
T Consensus 258 mATf~~dS~~V~----------iLDiR~P~tpva~L~-~H~a~VNgIaWaPhS~~hicTaGDD--~qaliWDl~q~~~~~ 324 (364)
T KOG0290 258 MATFAMDSNKVV----------ILDIRVPCTPVARLR-NHQASVNGIAWAPHSSSHICTAGDD--CQALIWDLQQMPREN 324 (364)
T ss_pred HHHHHCCCCEEE----------EEEECCCCCHHEHHH-CCCCCCCCEEECCCCCCEEEECCCC--CEEEEEECCCCCCCC
T ss_conf 866243786079----------997028875304432-4766643267658998605513786--168998543356667
Q ss_pred -CEEEE--ECCCCCCCCEEC---CCCCEEEE
Q ss_conf -67996--627875543788---78998999
Q gi|254780548|r 382 -QERLL--VEDSNLQAPTWS---PSGRSLIF 406 (447)
Q Consensus 382 -~~~~l--t~~~~~e~P~wS---PDG~~i~f 406 (447)
.--.| +.++....-.|| ||.-.|+|
T Consensus 325 ~~dPilay~a~~EvNqi~Ws~~~~Dwiai~~ 355 (364)
T KOG0290 325 GEDPILAYTAGGEVNQIQWSSSQPDWIAICF 355 (364)
T ss_pred CCCCHHHHHCCCEEEEEEECCCCCCEEEEEE
T ss_conf 7784442211262123662366898799981
No 334
>pfam09927 DUF2159 Predicted secreted (periplasmic) protein (DUF2159). This domain, found in various hypothetical prokaryotic proteins, has no known function.
Probab=39.56 E-value=18 Score=13.50 Aligned_cols=44 Identities=16% Similarity=0.234 Sum_probs=28.9
Q ss_pred EEEEEEEEECCCCCCEECCCCCC------C--C--------HHHHHHHHHHHHHHHHHHH
Q ss_conf 25789998415554200002323------3--7--------7788999999989999975
Q gi|254780548|r 123 RLRVEFRLWDVKDRKQIIGKKFF------S--S--------PASWRKIAHTISDDIYQSI 166 (447)
Q Consensus 123 ~~~v~~~L~dv~~~~~i~~~~~~------~--~--------~~~~R~~ah~~ad~i~~~l 166 (447)
.+.++|.|.|..+|+.|...+.. . . .+...+++..+||+|...|
T Consensus 60 ~~~a~y~L~d~~tg~~v~sG~~~~~tsy~~~~s~~A~~~A~~DA~~Rla~~lAd~I~~rL 119 (120)
T pfam09927 60 TGTATYTLVDLATGKVVASGTVTSFTSYDATGSTYATLAAERDAEERLARELADQIVTRL 119 (120)
T ss_pred EEEEEEEEEECCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999889997999507999986747687899999999999999999999999862
No 335
>COG5169 HSF1 Heat shock transcription factor [Transcription]
Probab=39.02 E-value=17 Score=13.62 Aligned_cols=12 Identities=17% Similarity=0.445 Sum_probs=9.3
Q ss_pred EECCCCCEEEEE
Q ss_conf 576899848998
Q gi|254780548|r 218 RFSPNQQKVAYA 229 (447)
Q Consensus 218 ~wSpDG~~Iay~ 229 (447)
.|||||+.+...
T Consensus 31 ~Ws~~G~sfvI~ 42 (282)
T COG5169 31 QWSPDGRSFVIL 42 (282)
T ss_pred EECCCCCEEEEE
T ss_conf 887899989996
No 336
>COG5563 Predicted integral membrane proteins containing uncharacterized repeats [Function unknown]
Probab=38.65 E-value=19 Score=13.41 Aligned_cols=199 Identities=17% Similarity=0.109 Sum_probs=89.6
Q ss_pred ECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCC-CEEEEEECCCCCEEEEEECCCC---CEEEEEEECCCCCC
Q ss_conf 7689984899850346764430377117971799743798-5244455158955677413787---30389984047741
Q gi|254780548|r 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRALISVQKDE---AMDIYSVDLQSNAT 294 (447)
Q Consensus 219 wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~-~~~~p~wSPDG~~la~~~s~~g---~~~I~~~d~~~~~~ 294 (447)
-|+||.-++=.++..+..+..+.. ..+..-+++....+ ...+-..|-||+.+.-..+..- ...=|-+.-+.+.+
T Consensus 122 is~~G~v~iG~s~~~~~~~~~~~~--~~~~~~~l~~~~~~s~SvA~gIs~dG~vi~G~~s~a~g~~~g~~~~vk~~~~~i 199 (379)
T COG5563 122 ISNDGSVIIGISYADRPGYSAAVV--VNGNFMKLLGTLGGSSSVARGISSDGSVIVGSNSTAAGIVTGATFGVKWQKGTI 199 (379)
T ss_pred CCCCCCEEEECCCCCCCCCEEEEE--ECCCEEEECCCCCCCHHEEEECCCCCCEEEEEECCCCCCCCCCEEEEECCCCEE
T ss_conf 677740787405665657357898--738355413656542110110356896885021223553004228740366505
Q ss_pred CCCCCCCCC-CC-CEEEECCCCEEEEEECCCCCCCEEEEEECC--CCCCEEE-EECCCCEEEEEECCCCCEEEE-EECCC
Q ss_conf 100257764-32-025521674789972377653315764025--6741112-203530000468776888999-97149
Q gi|254780548|r 295 ERLTNTLFI-NI-SASYSPDSSQIVFESDREGKEQLYVMQSNG--SDQKRIS-QDKEASYFDPVWSPQGDLIAF-TKFSG 368 (447)
Q Consensus 295 ~~lT~~~~~-d~-~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g--~~~~rlT-~~~~~~~~~p~wSPdG~~Iaf-~~~~~ 368 (447)
+++...+.. -+ .-+.|-||+-|+=.+.-.-.-+.|.+.-.+ ++..-+. ..+.++...-+.|-||+-|+= .....
T Consensus 200 t~l~~~~~~~~s~a~ais~dG~ii~G~~~~~~~~~~~av~W~g~t~~~~~~~~t~g~~~S~a~AisadG~vivG~~es~~ 279 (379)
T COG5563 200 TDLPLLPTASGSGANAISEDGQIIGGRSEIVLGGHAFAVIWNGDTKNQLHTLGTLGGSNSVAYAISADGKVIVGGSESAS 279 (379)
T ss_pred EECCCCCCCCCCCEEEECCCCCEEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEEEECC
T ss_conf 61478754455420122478748987777525744888642577885034661179841589998369928997799768
Q ss_pred CCEEEEEEECCCCCEEEEECCC-CCCCCEECCCCCEEE-EEEEECCCCCEEEE
Q ss_conf 9157999988999679966278-755437887899899-99950898733799
Q gi|254780548|r 369 EKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLI-FSRKKDGDTGSKLY 419 (447)
Q Consensus 369 ~~~~i~~~~~~g~~~~~lt~~~-~~e~P~wSPDG~~i~-f~~~~~g~~~~~l~ 419 (447)
+.-+.++..-+-....+=|.++ ..-.-.+|.||+.|+ |+++..+......|
T Consensus 280 ~e~ha~v~~~~~v~~dLGTlgg~yS~a~~vSadG~~ivg~st~~~~~~ha~~y 332 (379)
T COG5563 280 GESHAAVWPNGHVMTDLGTLGGFYSSATGVSADGAVIVGFSTNKNGELHAFVY 332 (379)
T ss_pred CCEEEEEEECCCCCCCCCCCCCCCEECCEEEECCCEEEEEEECCCCCEEEEEE
T ss_conf 84079997088641222124664200320330351688899626883344677
No 337
>PRK11548 hypothetical protein; Provisional
Probab=38.21 E-value=19 Score=13.36 Aligned_cols=35 Identities=17% Similarity=0.064 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCE---EEEEEECCCCCC
Q ss_conf 679999999999999872021331---699997158664
Q gi|254780548|r 11 LNMKINLCLLLVLIGGFFPTSIHA---FVKVATNSANYS 46 (447)
Q Consensus 11 ~~m~~~l~l~l~l~~~~~~~~a~A---~~~i~It~~~~~ 46 (447)
|.||+++..+++++.++ +..... ...++|.+|+..
T Consensus 1 m~~k~l~~a~ll~~lll-sgCS~~~~~vYk~dI~QGN~i 38 (113)
T PRK11548 1 MRCKTLTAAAAVLLMLT-AGCSTLERVVYRPDINQGNYL 38 (113)
T ss_pred CCHHHHHHHHHHHHHHH-CCCCCCCCCCCCCCCCCCCCC
T ss_conf 92578899999999998-011578775657655756766
No 338
>PRK13486 bifunctional enterobactin receptor/adhesin protein; Provisional
Probab=38.16 E-value=19 Score=13.37 Aligned_cols=59 Identities=15% Similarity=0.125 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHCCC--CCEEEEEEECCCCCC------CEEEEECCCCCCC-CHHHHHHHHHHH
Q ss_conf 9999999999999872021--331699997158664------2004630567753-035789999998
Q gi|254780548|r 13 MKINLCLLLVLIGGFFPTS--IHAFVKVATNSANYS------PVSIAFTKFVSID-ELGGKVSEVVSK 71 (447)
Q Consensus 13 m~~~l~l~l~l~~~~~~~~--a~A~~~i~It~~~~~------pi~IAv~~f~~~~-~~~~~i~~ii~~ 71 (447)
||+..+..+++.|+.+++. +.|+.+|.||..... |.+|.|..-+... .....+.++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vvVTatr~~~~l~d~p~sVsVIt~e~I~~~~~~~l~d~L~~ 68 (696)
T PRK13486 1 MRITTLASVVIPCLGFSASSIAAAEDVMIVSASGYEKKLTNAAASVSVISQEELQSSQYHDLAEALRS 68 (696)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHCCCCEEEECHHHHHHHCCCCHHHHHHH
T ss_conf 96147899999875320344345688499901686167788898669989999976287889999864
No 339
>pfam06510 DUF1102 Protein of unknown function (DUF1102). This family consists of several hypothetical archaeal proteins of unknown function.
Probab=38.09 E-value=19 Score=13.35 Aligned_cols=14 Identities=36% Similarity=0.589 Sum_probs=5.3
Q ss_pred EEEEEECCCCCEEE
Q ss_conf 89999714991579
Q gi|254780548|r 360 LIAFTKFSGEKFAI 373 (447)
Q Consensus 360 ~Iaf~~~~~~~~~i 373 (447)
+|.|+-..++.-.|
T Consensus 141 ~i~f~V~~g~~v~v 154 (183)
T pfam06510 141 KICFTVYHGGPVPI 154 (183)
T ss_pred EEEEEECCCCEEEE
T ss_conf 18999838990776
No 340
>PRK10641 btuB vitamin B12/cobalamin outer membrane transporter; Provisional
Probab=37.82 E-value=14 Score=14.21 Aligned_cols=59 Identities=12% Similarity=0.131 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCE--EEEEEECCCCC------CCEEEEECCCCCCCC-HHHHHHHHHHH
Q ss_conf 79999999999999872021331--69999715866------420046305677530-35789999998
Q gi|254780548|r 12 NMKINLCLLLVLIGGFFPTSIHA--FVKVATNSANY------SPVSIAFTKFVSIDE-LGGKVSEVVSK 71 (447)
Q Consensus 12 ~m~~~l~l~l~l~~~~~~~~a~A--~~~i~It~~~~------~pi~IAv~~f~~~~~-~~~~i~~ii~~ 71 (447)
||||..+|.++++.++ ++-|+. ..+|.||.... .|-.|.|..=+..+. .+..+.++++.
T Consensus 1 ~~~~~~~~~~~~~~~~-~~~a~~~~~devvVTAtr~~~~~~~~p~sV~VIt~e~i~~~~~~~l~d~L~~ 68 (615)
T PRK10641 1 MIKKASLLTALSVTAF-SAWAQDTSPDTLVVTANRFQQPRSTVLAPTTVVTRQDIDRWQSTSVNDVLRR 68 (615)
T ss_pred CCHHHHHHHHHHHHCC-HHHHCCCCCCEEEEECCCCCCCHHHCCCCEEEECHHHHHHHCCCCHHHHHHH
T ss_conf 9448999999987513-3543358997199903485157766785579989999986289989999963
No 341
>PRK11397 dacD D-alanyl-D-alanine carboxypeptidase; Provisional
Probab=37.50 E-value=20 Score=13.29 Aligned_cols=12 Identities=0% Similarity=0.177 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHH
Q ss_conf 578999999862
Q gi|254780548|r 62 GGKVSEVVSKDL 73 (447)
Q Consensus 62 ~~~i~~ii~~DL 73 (447)
+..+++++..=|
T Consensus 63 pAS~TKlMT~~v 74 (390)
T PRK11397 63 PASLTKLMTGYV 74 (390)
T ss_pred CHHHHHHHHHHH
T ss_conf 779999999999
No 342
>COG0384 Predicted epimerase, PhzC/PhzF homolog [General function prediction only]
Probab=37.19 E-value=17 Score=13.78 Aligned_cols=54 Identities=22% Similarity=0.122 Sum_probs=35.4
Q ss_pred EEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCC
Q ss_conf 7899984155542000023233777889999999899999750445555441788751367
Q gi|254780548|r 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185 (447)
Q Consensus 125 ~v~~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~f~triafv~~~~~ 185 (447)
.+.+.++||++.+...|....+-.. +-..+|+-++++..+-+...| +||.....
T Consensus 3 ~~~~~~vDvFt~~~~~GNp~aVv~~-----a~~Lsd~~MQ~IA~e~n~SET--~Fv~~~~~ 56 (291)
T COG0384 3 TIPVYQVDVFTSKPFGGNPLAVVLD-----ADGLSDEQMQAIAREFNLSET--AFVLPPDD 56 (291)
T ss_pred CCEEEEEEEECCCCCCCCCEEEEEC-----CCCCCHHHHHHHHHHHCCCEE--EEECCCCC
T ss_conf 5406999983378989982299818-----999999999999998499616--99727888
No 343
>pfam10081 DUF2319 Predicted membrane protein (DUF2319). Members of this family of hypothetical bacterial proteins have no known function.
Probab=36.92 E-value=20 Score=13.23 Aligned_cols=202 Identities=16% Similarity=0.112 Sum_probs=78.5
Q ss_pred CCCCCCHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCEEC--CCCCCCCH--HHHHHHHHHHHHHHHHHHCCC
Q ss_conf 11145778874156218999997404662257899984155542000--02323377--788999999989999975044
Q gi|254780548|r 94 PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII--GKKFFSSP--ASWRKIAHTISDDIYQSITGE 169 (447)
Q Consensus 94 ~~~~~~f~~W~~~gad~lv~G~i~~~~~~~~~v~~~L~dv~~~~~i~--~~~~~~~~--~~~R~~ah~~ad~i~~~ltG~ 169 (447)
....-.+.+|..+|.+.=....-...... +...+|+.-. -+-|.|-. .+...- ++..+..|- .
T Consensus 205 SGSp~Slv~W~sLG~qGR~FV~~Gp~~~~--------I~~~~G~pA~ePIRVYaGl~sa~~~~~r----A~lal~EL~-R 271 (534)
T pfam10081 205 SGSPASLVDWESLGRQGRDFVSGGPTAAD--------IAAFTGRPAVEPIRVYVGLASADTPEAR----AALALRELE-R 271 (534)
T ss_pred CCCCCCCCCHHHHCCCCCCHHCCCCCHHH--------HHHHCCCCCCCCEEEEECCCCCCCHHHH----HHHHHHHHH-H
T ss_conf 78974337876736102312147999889--------8876088766763676225668998999----999999998-5
Q ss_pred CCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCC--------C--
Q ss_conf 555544178875136764421001231145540268862176402345576899848998503467644--------3--
Q gi|254780548|r 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR--------V-- 239 (447)
Q Consensus 170 ~G~f~triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~--------i-- 239 (447)
.|.|+-++.-|....+++ ||-+.--.-...++.+.-.+ .+-.+|-=-+.++|..- .+...+ |
T Consensus 272 tGafdR~vLvV~tpTGTG------Wvn~~a~~a~Eyl~~GD~A~-va~QYSylPS~lsfl~d-~~~~~~a~raL~~aV~~ 343 (534)
T pfam10081 272 TGAFDRKVLVVATPTGTG------WVDPAAADALEYLHGGDVAT-VSMQYSYLPSWLSFLVD-REYAVDAARALFDAVYA 343 (534)
T ss_pred CCCCCCCEEEEECCCCCC------CCCHHHHHHHHHHCCCCEEE-EEEECCCCCCCHHHHCC-CCHHHHHHHHHHHHHHH
T ss_conf 588563169998899888------66834421566530796689-97201447640767316-54099999999999999
Q ss_pred CEEEECCCCCEEEEECCCC---CEEEEEECCCCCEEEEEECCCCCEEEEEEECC-CCCCCCCCCCCCCCCCEEEEC---C
Q ss_conf 0377117971799743798---52444551589556774137873038998404-774110025776432025521---6
Q gi|254780548|r 240 YLMDTRIDRAPKRIGNFRS---MILAPRFSSNGKRALISVQKDEAMDIYSVDLQ-SNATERLTNTLFINISASYSP---D 312 (447)
Q Consensus 240 ~~~~~~~g~~~~~~~~~~~---~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~-~~~~~~lT~~~~~d~~p~~sp---D 312 (447)
+...+...+++++...... ..+..+|+.-.. + ....|| -+|+=... +...+++|.++.. -+|.|.| |
T Consensus 344 ~~~~lP~~~RPkl~l~GeSLGa~~~~~af~~~~~-~--~~~~dg--alw~G~P~~s~~w~~lt~~Rdp-GSPe~lPv~~~ 417 (534)
T pfam10081 344 HWKTLPPDSRPRLYLHGESLGAFGSQAAFDLLED-L--LDPVDG--ALWSGPPFFSRLWRDLTDRRDP-GSPEWLPVYDD 417 (534)
T ss_pred HHHHCCCCCCCEEEEECCCCCCCCCHHHCCCHHH-H--HHHCCE--EEEECCCCCCCHHHHHHHCCCC-CCCCCCCEECC
T ss_conf 9984893339658996127421223111035777-6--502573--6885799998067888636899-89750423048
Q ss_pred CCEEEEEECC
Q ss_conf 7478997237
Q gi|254780548|r 313 SSQIVFESDR 322 (447)
Q Consensus 313 G~~I~f~Sdr 322 (447)
|+.+-|.++-
T Consensus 418 G~~VRF~~~~ 427 (534)
T pfam10081 418 GRTVRFANQP 427 (534)
T ss_pred CCEEEEECCC
T ss_conf 8347873582
No 344
>KOG4640 consensus
Probab=36.77 E-value=20 Score=13.21 Aligned_cols=68 Identities=10% Similarity=0.085 Sum_probs=34.6
Q ss_pred EEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCEE--EEEECCCCCEEEEEECCCCCEEEEEEECCCCC
Q ss_conf 557689984899850346764430377117971799743798524--44551589556774137873038998404774
Q gi|254780548|r 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL--APRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293 (447)
Q Consensus 217 P~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~--~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~ 293 (447)
-.|+|--.-||+.+- .+ ++-++-+. -++ -...+++|.+. +-.|-|||+-||+.... | .|-+.|.+.+.
T Consensus 26 ~ewnP~~dLiA~~t~-~g---elli~R~n-~qR-lwtip~p~~~v~~sL~W~~DGkllaVg~kd-G--~I~L~Dve~~~ 95 (665)
T KOG4640 26 IEWNPKMDLIATRTE-KG---ELLIHRLN-WQR-LWTIPIPGENVTASLCWRPDGKLLAVGFKD-G--TIRLHDVEKGG 95 (665)
T ss_pred EEECCCCCHHHEECC-CC---CEEEEEEC-CCE-EEECCCCCCCCCEEEEECCCCCEEEEEECC-C--EEEEEECCCCC
T ss_conf 997686353230005-77---18998722-523-685158998631146665888779999548-8--48998726797
No 345
>COG4775 Outer membrane protein/protective antigen OMA87 [Cell envelope biogenesis, outer membrane]
Probab=36.06 E-value=21 Score=13.14 Aligned_cols=74 Identities=14% Similarity=0.191 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCEE--EEEEECCCCCC--CEEEEECCCC-CCCCHHHHHHHHHHHHHHCCCCEEECCHH
Q ss_conf 6799999999999998720213316--99997158664--2004630567-75303578999999862017514550865
Q gi|254780548|r 11 LNMKINLCLLLVLIGGFFPTSIHAF--VKVATNSANYS--PVSIAFTKFV-SIDELGGKVSEVVSKDLQRSDVFNLISQD 85 (447)
Q Consensus 11 ~~m~~~l~l~l~l~~~~~~~~a~A~--~~i~It~~~~~--pi~IAv~~f~-~~~~~~~~i~~ii~~DL~~SG~F~~i~~~ 85 (447)
|.|+..+. +++|+++..+.++.+- -.|.+.+.... ...+...|.. |+.--..++.++|+ .|-.+|+|+.+...
T Consensus 1 m~~~~~~~-~~~l~~~~~~~~a~~~vv~~I~v~G~~~~~~~~~~~~l~~~~G~~~s~~~i~~~ik-~L~~tg~F~~v~~~ 78 (766)
T COG4775 1 MRMKKLLS-ALLLFASASAVAAEAFVVKDIRVEGLQRVSSGTALSYLPVRVGDTVSDEDIDEAIK-ALYATGYFEDVRVE 78 (766)
T ss_pred CCHHHHHH-HHHHHHHCCHHHCCCEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHH-HHHHCCCCCCEEEE
T ss_conf 95578899-99987513111033627878999655424512366415735575136778899999-99716897613788
Q ss_pred H
Q ss_conf 5
Q gi|254780548|r 86 S 86 (447)
Q Consensus 86 ~ 86 (447)
.
T Consensus 79 ~ 79 (766)
T COG4775 79 R 79 (766)
T ss_pred E
T ss_conf 7
No 346
>KOG4476 consensus
Probab=35.40 E-value=21 Score=13.07 Aligned_cols=32 Identities=22% Similarity=0.419 Sum_probs=13.4
Q ss_pred EEEECCCCCEEEEEEECCCCCEEEEEECCC---CCEEEEEEE
Q ss_conf 123114554026886217640234557689---984899850
Q gi|254780548|r 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPN---QQKVAYATY 231 (447)
Q Consensus 193 l~i~d~DG~n~~~l~~~~~~~~~sP~wSpD---G~~Iay~s~ 231 (447)
||+-|-.-+..|+-|.+ . +|||. |+-+.|--+
T Consensus 49 IFVf~Ee~sGiKRWTDG---~----SWSPSRIsG~FLvYrEl 83 (248)
T KOG4476 49 IFVFDEEESGIKRWTDG---K----SWSPSRISGKFLVYREL 83 (248)
T ss_pred EEEEEECCCCCEECCCC---C----CCCCCCEEEEEEEEEEH
T ss_conf 79985054664342478---7----54712131036762001
No 347
>COG5037 TOS9 Gluconate transport-inducing protein [Signal transduction mechanisms / Carbohydrate transport and metabolism]
Probab=35.40 E-value=21 Score=13.07 Aligned_cols=32 Identities=22% Similarity=0.419 Sum_probs=13.4
Q ss_pred EEEECCCCCEEEEEEECCCCCEEEEEECCC---CCEEEEEEE
Q ss_conf 123114554026886217640234557689---984899850
Q gi|254780548|r 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPN---QQKVAYATY 231 (447)
Q Consensus 193 l~i~d~DG~n~~~l~~~~~~~~~sP~wSpD---G~~Iay~s~ 231 (447)
||+-|-.-+..|+-|.+ . +|||. |+-+.|--+
T Consensus 49 IFVf~Ee~sGiKRWTDG---~----SWSPSRIsG~FLvYrEl 83 (248)
T COG5037 49 IFVFDEEESGIKRWTDG---K----SWSPSRISGKFLVYREL 83 (248)
T ss_pred EEEEEECCCCCEECCCC---C----CCCCCCEEEEEEEEEEH
T ss_conf 79985054664342478---7----54712131036762001
No 348
>PRK13659 hypothetical protein; Provisional
Probab=33.89 E-value=22 Score=12.91 Aligned_cols=26 Identities=31% Similarity=0.377 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 76799999999999998720213316
Q gi|254780548|r 10 ELNMKINLCLLLVLIGGFFPTSIHAF 35 (447)
Q Consensus 10 ~~~m~~~l~l~l~l~~~~~~~~a~A~ 35 (447)
.+.++.+|..+++++.+.+..+++|+
T Consensus 3 ~~~kr~~L~~~ll~~~~~~~~s~~A~ 28 (112)
T PRK13659 3 TLSKRLLLLAMLLLLALVLTTSAHAE 28 (112)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 07799999999999999998687763
No 349
>pfam05935 Arylsulfotrans Arylsulfotransferase (ASST). This family consists of several bacterial Arylsulfotransferase proteins. Arylsulfotransferase (ASST) transfers a sulfate group from phenolic sulfate esters to a phenolic acceptor substrate.
Probab=33.32 E-value=23 Score=12.85 Aligned_cols=244 Identities=16% Similarity=0.140 Sum_probs=122.1
Q ss_pred CCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCC
Q ss_conf 45555441788751367644210012311455402688621764023455768998489985034676443037711797
Q gi|254780548|r 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248 (447)
Q Consensus 169 ~~G~f~triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~ 248 (447)
....+..++.|+...... .....+++|.+|.-.-.+... ..-...-..-+||.-+ +.+. ..++-+|+- |+
T Consensus 106 ~~~~~~~gLy~v~~~~~~--~~~~~~~~D~~G~vRWyl~~~-~~~~~~~~~~~nG~l~-~~~~-----~~~~e~D~l-Gk 175 (459)
T pfam05935 106 VASKFADGLYLVNRTTSD--ETPYNFAVDTDGEVRWYLDQD-SISDNRDKQLKNGHLL-SGQG-----QRLYEFDLL-GR 175 (459)
T ss_pred CCCCCCCCEEEEECCCCC--CCCCEEEEECCCCEEEEECCC-CCCCCCEEECCCCCEE-EECC-----CCEEEEECC-CC
T ss_conf 643257957999688876--667149992898489997265-3554305895899799-9806-----816677235-63
Q ss_pred CEEEEECCCC----CEEEEEECCCCCEEEEEECCCC----------CEEEEEEECCCCCCCCCCCC--------------
Q ss_conf 1799743798----5244455158955677413787----------30389984047741100257--------------
Q gi|254780548|r 249 APKRIGNFRS----MILAPRFSSNGKRALISVQKDE----------AMDIYSVDLQSNATERLTNT-------------- 300 (447)
Q Consensus 249 ~~~~~~~~~~----~~~~p~wSPDG~~la~~~s~~g----------~~~I~~~d~~~~~~~~lT~~-------------- 300 (447)
..+ .-..++ ..-.-..-|+|+-|+.+...+. .-.|..+| .+|++.++-+.
T Consensus 176 v~~-~y~L~~g~~~~HHD~~e~pnGN~L~l~~~~~~~~~~~~~~tveD~IieiD-~tG~vv~~wDl~~iLd~yr~~~~~~ 253 (459)
T pfam05935 176 VIK-NYRLPGGYIDFHHDIVELPNGNLLALVAESNYRGDGDGVDTVEDTIIEID-KTGEVVDVWDLFKILDPYRTTRPFG 253 (459)
T ss_pred EEE-EEECCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCEECEEEEEEC-CCCCEEEEECHHHHCCCCCCCCCCC
T ss_conf 899-99889988761312179899989999743342368887676560999999-9998989976578688422446467
Q ss_pred --CC----CC----CCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEE-----------------------EECCC
Q ss_conf --76----43----20255216747899723776533157640256741112-----------------------20353
Q gi|254780548|r 301 --LF----IN----ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-----------------------QDKEA 347 (447)
Q Consensus 301 --~~----~d----~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT-----------------------~~~~~ 347 (447)
.+ .| -+-.|-++...|+. |.|.-+ -|..++..+++..-+- +...+
T Consensus 254 ~~~~~~~~~DW~H~N~i~y~~~~~s~~~-S~R~q~-~i~kid~~~~~i~Wilg~~~~W~~~~~~~ll~~~~~~g~f~w~~ 331 (459)
T pfam05935 254 DIPGVGGGRDWAHINSIYYDEKDDSIIV-SSRHQS-AVVKIDYRTGKVKWILGDPEGWPKEYQKKLLTPVDAEGDFDWTW 331 (459)
T ss_pred CCCCCCCCCCCEEECCEEEECCCCEEEE-EECCCC-EEEEEECCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCC
T ss_conf 8778877655346310597079996999-834512-58997058995799982875678678875256543588856525
Q ss_pred CEEEEEECCCCCEEEEEECCC---------------CCEEEEEEECCCCCEEEEECCCCC-----CCC-----EECCC-C
Q ss_conf 000046877688899997149---------------915799998899967996627875-----543-----78878-9
Q gi|254780548|r 348 SYFDPVWSPQGDLIAFTKFSG---------------EKFAIGVMKKDGSQERLLVEDSNL-----QAP-----TWSPS-G 401 (447)
Q Consensus 348 ~~~~p~wSPdG~~Iaf~~~~~---------------~~~~i~~~~~~g~~~~~lt~~~~~-----e~P-----~wSPD-G 401 (447)
.+.++.+.|+|+.++|-.... .+.-.|.+|.+....+|+-+-+.. -+| .+-+| |
T Consensus 332 ~QH~~~~~~~g~l~~fDNg~~r~~~~~~~~~~~~~ySr~v~Y~Ide~~~Tv~qvw~ygkerG~~~YS~~vs~v~~l~~~g 411 (459)
T pfam05935 332 GQHTAVLIPNGELMVFDNGDGRSLEQPALLSMKDNYSRGVEYKIDEKNMTVEQVWEYGKERGAEWYSPITSSVEYLSDKG 411 (459)
T ss_pred CCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCC
T ss_conf 76051984899699996998656776445666788316899998477777998578477467655167240126853899
Q ss_pred CEEEEEEE----ECCCCCEEEEEEECCCC
Q ss_conf 98999995----08987337999988997
Q gi|254780548|r 402 RSLIFSRK----KDGDTGSKLYSIDLNGR 426 (447)
Q Consensus 402 ~~i~f~~~----~~g~~~~~l~~~~~~G~ 426 (447)
.+++++.. ..+.....|-.++...+
T Consensus 412 n~lv~sG~~~~~~~~~~~~~i~Ev~~~~~ 440 (459)
T pfam05935 412 NYLVDSGGAGNDTNGKPTLEIIEIDPGTK 440 (459)
T ss_pred CEEEEECCCCCCCCCCCCCEEEEECCCCC
T ss_conf 79998353144678998636999767777
No 350
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; InterPro: IPR010041 This family of proteins are annotated as either enolase-phosphatases or putative enolase-phosphatases. The methionine salvage pathway converts the methylthioribose moiety of 5'-(methylthio)-adenosine to methionine via a series of biochemical steps in a wide variety of organisms. One enzyme active in this pathway is a bifunctional enolase-phosphatase called E-1 that promotes oxidative cleavage of the synthetic substrate 2,3-diketo-1-phosphohexane to 2-keto-pentanoate; it has been purified from the Gram-negative bacterium Klebsiella pneumoniae . The unusual metabolite 2,3-diketo-5-methylthio-1-phosphopentane is oxidatively cleaved to yield formate (from C-1), 2-keto-4-methylthiobutyrate (the transamination product of methionine), and 3-methylthiopropionate by E-1. The native enzyme is a monomeric protein of M(r) 27,000 requiring magnesium ion as a cofactor . The cloning and analysis of E-1 from Klebsiella oxytoca has been reported . .
Probab=33.19 E-value=21 Score=13.12 Aligned_cols=39 Identities=18% Similarity=0.370 Sum_probs=22.1
Q ss_pred CCCCCHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCEECCCCCCCCH
Q ss_conf 114577887415621899999740466225789998415554200002323377
Q gi|254780548|r 95 DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148 (447)
Q Consensus 95 ~~~~~f~~W~~~gad~lv~G~i~~~~~~~~~v~~~L~dv~~~~~i~~~~~~~~~ 148 (447)
+-+|-++.|+..|.+.-|.- .|++ ...|.+++.+-.|+-
T Consensus 118 DV~pAl~~w~~~Gl~~~vYS------SGSv---------aAQKLlFghs~~GdL 156 (240)
T TIGR01691 118 DVPPALEAWKKAGLRLYVYS------SGSV---------AAQKLLFGHSDAGDL 156 (240)
T ss_pred CHHHHHHHHHHCCCEEEEEC------CCCH---------HHHHHHHHCCCCCCC
T ss_conf 54789999987498799870------4417---------777766530533430
No 351
>COG3045 CreA Uncharacterized protein conserved in bacteria [Function unknown]
Probab=32.72 E-value=23 Score=12.79 Aligned_cols=41 Identities=29% Similarity=0.180 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEE----E--EEEECCCCCCCEEEEECCCCC
Q ss_conf 99999999999998720213316----9--999715866420046305677
Q gi|254780548|r 13 MKINLCLLLVLIGGFFPTSIHAF----V--KVATNSANYSPVSIAFTKFVS 57 (447)
Q Consensus 13 m~~~l~l~l~l~~~~~~~~a~A~----~--~i~It~~~~~pi~IAv~~f~~ 57 (447)
|++.+.++..+++++....++|+ + .+++.+... |.|-.|..
T Consensus 3 ~~~~~~ll~~~~~~~l~~~a~aE~iG~V~tvf~~~G~D~----IvveafdD 49 (165)
T COG3045 3 MKIRLLLLAGLLLLLLVGLAHAEEIGSVSTVFDWLGNDH----IVVEAFDD 49 (165)
T ss_pred CHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEECCCC----EEEEECCC
T ss_conf 167889999999987425434212033430689864870----89970479
No 352
>PRK05697 flagellar basal body-associated protein FliL-like protein; Validated
Probab=32.65 E-value=23 Score=12.78 Aligned_cols=25 Identities=12% Similarity=0.084 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 7788999999989999975044555
Q gi|254780548|r 148 PASWRKIAHTISDDIYQSITGEKGD 172 (447)
Q Consensus 148 ~~~~R~~ah~~ad~i~~~ltG~~G~ 172 (447)
..++|+-+-.-.+++.+.-||.+++
T Consensus 100 re~Lr~e~l~~vn~~l~~etG~~~V 124 (135)
T PRK05697 100 REEIRQECLKQVNELLEQETGKPLV 124 (135)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 9999999999999999863186643
No 353
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=32.23 E-value=24 Score=12.74 Aligned_cols=30 Identities=13% Similarity=0.274 Sum_probs=17.1
Q ss_pred EEEEEECCCCCEEEEECCCCCCCCEECCCCCEEEE
Q ss_conf 79999889996799662787554378878998999
Q gi|254780548|r 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406 (447)
Q Consensus 372 ~i~~~~~~g~~~~~lt~~~~~e~P~wSPDG~~i~f 406 (447)
+|.++|+.++..+.+. +.|..+|=|..++.
T Consensus 272 ~il~Y~~~t~~W~~~g-----~~P~~a~agaa~v~ 301 (323)
T TIGR03548 272 KILIYNVRTGKWKSIG-----NSPFFARCGAALLL 301 (323)
T ss_pred EEEEEECCCCEEEECC-----CCCCCCCCCCCEEE
T ss_conf 1799989999586887-----67555047452699
No 354
>pfam12234 Rav1p_C RAVE protein 1 C terminal. This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=32.20 E-value=24 Score=12.73 Aligned_cols=58 Identities=14% Similarity=0.320 Sum_probs=33.7
Q ss_pred CCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEE--EECCCCCEEEEEE--CCCCCEEEEEEECC
Q ss_conf 45555441788751367644210012311455402688--6217640234557--68998489985034
Q gi|254780548|r 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRF--SPNQQKVAYATYDD 233 (447)
Q Consensus 169 ~~G~f~triafv~~~~~~~~~~~~l~i~d~DG~n~~~l--~~~~~~~~~sP~w--SpDG~~Iay~s~~~ 233 (447)
.+|....|+|-|.+++ .+|-|-|.+|+-...- ....+. +.---| .|||+.|..|.|.+
T Consensus 35 isgSs~~K~A~V~~~~------~~LtIWD~~~~~LEyee~f~~~~~-I~DLDWtst~d~qsILaVGf~~ 96 (629)
T pfam12234 35 ISGSSLGKVALVDQDR------TELTIWDTRGGVLEYEEKFEKQEK-IRDLDWTSTPDGQSILAIGFPH 96 (629)
T ss_pred ECCCCCCCEEEEECCC------CEEEEEECCCCEEEEEECCCCCCC-EEECCCCCCCCCCEEEEEECCC
T ss_conf 1146678579997899------889999758978887302478995-5605556379987589963274
No 355
>COG5314 Conjugal transfer/entry exclusion protein [Intracellular trafficking and secretion]
Probab=32.05 E-value=24 Score=12.72 Aligned_cols=42 Identities=17% Similarity=0.049 Sum_probs=26.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
Q ss_conf 9414456777679999999999999872021331699997158
Q gi|254780548|r 1 MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA 43 (447)
Q Consensus 1 ~~~~~f~~~~~~m~~~l~l~l~l~~~~~~~~a~A~~~i~It~~ 43 (447)
|.||.|.+-.+.|+..+ .+++++......+++|-+.+++..-
T Consensus 1 m~~r~~~~r~ls~~~~l-iav~~~~~~~~qpa~a~~vfdpSN~ 42 (252)
T COG5314 1 MFSRPMRARALSMIAIL-IAVAFPSYAGVQPAQALIVFDPSNY 42 (252)
T ss_pred CCCHHHHHHHHHHHHHH-HHHHHHHHHCCCCCCCEEEECCHHH
T ss_conf 97305789999999999-9998743310577630145660178
No 356
>pfam08329 ChitinaseA_N Chitinase A, N-terminal domain. This domain is found in a number of bacterial chitinases and similar viral proteins. It is organized into a fibronectin III module domain-like fold, comprising only beta strands. Its function is not known, but it may be involved in interaction with the enzyme substrate, chitin. It is separated by a hinge region from the catalytic domain (pfam00704); this hinge region is probably mobile, allowing the N-terminal domain to have different relative positions in solution.
Probab=31.80 E-value=24 Score=12.69 Aligned_cols=15 Identities=20% Similarity=0.279 Sum_probs=5.8
Q ss_pred EEEEEECCCCCCCCC
Q ss_conf 389984047741100
Q gi|254780548|r 283 DIYSVDLQSNATERL 297 (447)
Q Consensus 283 ~I~~~d~~~~~~~~l 297 (447)
+|-+.|.+|..+..|
T Consensus 104 ~i~VADTDGsHL~PL 118 (133)
T pfam08329 104 EIVVADTDGSHLKPL 118 (133)
T ss_pred EEEEECCCCCCCCCC
T ss_conf 899976883335456
No 357
>PRK00031 lolA outer-membrane lipoprotein carrier protein; Reviewed
Probab=31.42 E-value=24 Score=12.65 Aligned_cols=12 Identities=33% Similarity=0.188 Sum_probs=4.6
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q gi|254780548|r 13 MKINLCLLLVLI 24 (447)
Q Consensus 13 m~~~l~l~l~l~ 24 (447)
||+.+.++++++
T Consensus 1 mk~~~~~~~~~~ 12 (201)
T PRK00031 1 MKKLLIAALLAA 12 (201)
T ss_pred CCHHHHHHHHHH
T ss_conf 915999999999
No 358
>PRK10780 periplasmic chaperone; Provisional
Probab=30.35 E-value=25 Score=12.53 Aligned_cols=17 Identities=18% Similarity=-0.199 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHHHC
Q ss_conf 99999999999998720
Q gi|254780548|r 13 MKINLCLLLVLIGGFFP 29 (447)
Q Consensus 13 m~~~l~l~l~l~~~~~~ 29 (447)
||++|+.+++++.+..+
T Consensus 1 mKk~l~~~~l~l~l~~~ 17 (161)
T PRK10780 1 MKKWLLAAGLGLALATS 17 (161)
T ss_pred CHHHHHHHHHHHHHHHH
T ss_conf 95899999999985888
No 359
>pfam02402 Lysis_col Lysis protein. These small bacterial proteins are required for colicin release and partial cell lysis. This family contains lysis proteins for several different forms of colicin. Bacillus subtilis lytA has been included in this family, the similarity is not highly significant, however it is also a short protein, that is involved in secretion of other proteins (Bateman A pers. obs.).
Probab=29.76 E-value=13 Score=14.58 Aligned_cols=34 Identities=18% Similarity=0.212 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC
Q ss_conf 99999999999998720213316999971586642
Q gi|254780548|r 13 MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSP 47 (447)
Q Consensus 13 m~~~l~l~l~l~~~~~~~~a~A~~~i~It~~~~~p 47 (447)
||+.+++.++++..++ .+.+|...=|+.+|...|
T Consensus 1 Mkki~~~~i~~~~~~L-~aCQaNyiRDvqGGtVaP 34 (46)
T pfam02402 1 MKKILFIGILLLTVLL-SACQANYIRDVQGGTVAP 34 (46)
T ss_pred CCEEEEHHHHHHHHHH-HHHHHHHEEECCCCEECC
T ss_conf 9242013999999999-985550412256852778
No 360
>PRK09408 ompX outer membrane protein X; Provisional
Probab=29.74 E-value=25 Score=12.63 Aligned_cols=22 Identities=27% Similarity=0.282 Sum_probs=9.1
Q ss_pred HHHHHHHHHH-HHHHHHCCCCCE
Q ss_conf 9999999999-999872021331
Q gi|254780548|r 13 MKINLCLLLV-LIGGFFPTSIHA 34 (447)
Q Consensus 13 m~~~l~l~l~-l~~~~~~~~a~A 34 (447)
||+.+|+.++ ++.++.+.++.|
T Consensus 1 mkk~~~~s~~~~~~~~~a~~a~A 23 (171)
T PRK09408 1 MKKIACLSALAAVLAFTAGTAVA 23 (171)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 92247899999998856666642
No 361
>PRK10954 periplasmic protein disulfide isomerase I; Provisional
Probab=29.59 E-value=26 Score=12.45 Aligned_cols=35 Identities=11% Similarity=0.003 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHCCCCC-E--EEEEEECCCCCCC
Q ss_conf 999999999999987202133-1--6999971586642
Q gi|254780548|r 13 MKINLCLLLVLIGGFFPTSIH-A--FVKVATNSANYSP 47 (447)
Q Consensus 13 m~~~l~l~l~l~~~~~~~~a~-A--~~~i~It~~~~~p 47 (447)
||+++.++++++.++.+.++. . ..+..+.++...+
T Consensus 1 mkk~~~~~~~llls~~a~Aa~~~eG~~Y~~L~~p~~~~ 38 (207)
T PRK10954 1 MKKIWLALAGMVLAFSASAAQFTDGKQYTTLDKPVAGA 38 (207)
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCC
T ss_conf 91599999999999772250354899755888888999
No 362
>KOG1057 consensus
Probab=29.54 E-value=26 Score=12.44 Aligned_cols=12 Identities=25% Similarity=0.517 Sum_probs=4.8
Q ss_pred CCCCCEEEEEEE
Q ss_conf 145540268862
Q gi|254780548|r 197 DRDGANIRYLTP 208 (447)
Q Consensus 197 d~DG~n~~~l~~ 208 (447)
+.||+..+..|-
T Consensus 238 ptdgtDVKvYTV 249 (1018)
T KOG1057 238 PTDGTDVKVYTV 249 (1018)
T ss_pred CCCCCCCEEEEE
T ss_conf 789862037860
No 363
>TIGR02953 penta_MxKDx pentapeptide MXKDX repeat protein; InterPro: IPR014299 Members of this protein family are small bacterial proteins, each with an N-terminal signal sequence followed by up to 11 imperfect repeats of a pentapeptide. The pentapeptide repeat is usually of the form Met-Xaa-Lys-Asp-Xaa..
Probab=28.96 E-value=27 Score=12.38 Aligned_cols=20 Identities=10% Similarity=-0.031 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHCCCCCEE
Q ss_conf 99999999998720213316
Q gi|254780548|r 16 NLCLLLVLIGGFFPTSIHAF 35 (447)
Q Consensus 16 ~l~l~l~l~~~~~~~~a~A~ 35 (447)
.+|.+.|++++.+++.|+||
T Consensus 6 ~~~~a~f~~~l~~ap~A~Aq 25 (89)
T TIGR02953 6 AISAAAFSAGLSLAPAAFAQ 25 (89)
T ss_pred HHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999998851055421
No 364
>pfam11134 Phage_stabilize Phage stabilisation protein. Phage stabilisation protein, also referred to as gp10 has a structure rich in beta sheets which spontaneously assembles into hexamers. Gp10 forms part of the baseplate of bacteriophage T4 and functions as a molecular lever that rotates and extends the hinged short tail fibers to facilitate cell attachment.
Probab=28.11 E-value=28 Score=12.28 Aligned_cols=28 Identities=14% Similarity=0.140 Sum_probs=15.5
Q ss_pred CCCEEEEEEECCCCCEEEEEECCCCCEEEEEE
Q ss_conf 55402688621764023455768998489985
Q gi|254780548|r 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230 (447)
Q Consensus 199 DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s 230 (447)
|=.+++.++..++. =.|+.||..+.+++
T Consensus 133 dlG~v~Dv~~~rGr----Y~wt~DGt~~f~VT 160 (468)
T pfam11134 133 DLGAVRDMCRLRGR----YVWTKDGTDIFGVT 160 (468)
T ss_pred CCCCHHEEEEECCE----EEEEECCCEEEEEE
T ss_conf 36573116773547----99970686079887
No 365
>PRK05303 flgI flagellar basal body P-ring protein; Provisional
Probab=27.84 E-value=28 Score=12.25 Aligned_cols=67 Identities=13% Similarity=0.115 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEE---EEEEECCCCCCCE-EEE-ECCCCCCCCHHH---HHHHHHHHHHHCCCC
Q ss_conf 799999999999998720213316---9999715866420-046-305677530357---899999986201751
Q gi|254780548|r 12 NMKINLCLLLVLIGGFFPTSIHAF---VKVATNSANYSPV-SIA-FTKFVSIDELGG---KVSEVVSKDLQRSDV 78 (447)
Q Consensus 12 ~m~~~l~l~l~l~~~~~~~~a~A~---~~i~It~~~~~pi-~IA-v~~f~~~~~~~~---~i~~ii~~DL~~SG~ 78 (447)
+|++.+++++++++++++.+++|. ...+|.+...+++ ... |.-..|.++-.. --.+-+.+=|++-|.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~a~RIKDia~i~GvR~NqLiGYGLVVGL~GTGD~~~~~~fT~qsl~nmL~~~Gv 77 (368)
T PRK05303 3 RMLMLLLLLLLLLLLLLAAPAQAERIKDLASIQGVRDNQLIGYGLVVGLDGTGDQTTQTPFTTQSLANMLEQLGV 77 (368)
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEEEEECCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCC
T ss_conf 389999999999999844356665554221041035535477889982287788877763279999999997498
No 366
>COG0445 GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning]
Probab=26.46 E-value=29 Score=12.12 Aligned_cols=21 Identities=19% Similarity=0.322 Sum_probs=8.1
Q ss_pred EEEEEEECCCCEEEEEEEEECC
Q ss_conf 9999740466225789998415
Q gi|254780548|r 112 VTGRVIKEGKDRLRVEFRLWDV 133 (447)
Q Consensus 112 v~G~i~~~~~~~~~v~~~L~dv 133 (447)
|.|-++..|. .+.....+.-+
T Consensus 134 v~GV~t~~G~-~~~a~aVVlTT 154 (621)
T COG0445 134 VVGVVTADGP-EFHAKAVVLTT 154 (621)
T ss_pred EEEEEECCCC-EEECCEEEEEE
T ss_conf 8999927878-51068799963
No 367
>pfam04170 NlpE Uncharacterized lipoprotein NlpE involved in copper resistance. This family represents a bacterial outer membrane lipoprotein that is necessary for signalling by the Cpx pathway. This pathway responds to cell envelope disturbances and increases the expression of periplasmic protein folding and degradation factors. While the molecular function of the NlpE protein is unknown, it may be involved in detecting bacterial adhesion to abiotic surfaces. In Escherichia coli and Salmonella typhi, NlpE is also known to confer copper tolerance in copper-sensitive strains of Escherichia coli, and may be involved in copper efflux and delivery of copper to copper-dependent enzymes.
Probab=25.46 E-value=31 Score=11.97 Aligned_cols=18 Identities=11% Similarity=0.185 Sum_probs=8.5
Q ss_pred CCCCCCCEEEECCCCEEE
Q ss_conf 776432025521674789
Q gi|254780548|r 300 TLFINISASYSPDSSQIV 317 (447)
Q Consensus 300 ~~~~d~~p~~spDG~~I~ 317 (447)
-++|++.-...+||....
T Consensus 10 C~GI~ttLtL~~Dgty~l 27 (86)
T pfam04170 10 CEGIDTTLTLNADGTYVL 27 (86)
T ss_pred CCCCEEEEEECCCCCEEE
T ss_conf 998079999979996999
No 368
>PRK10884 putative signal transduction protein; Provisional
Probab=25.09 E-value=27 Score=12.36 Aligned_cols=21 Identities=19% Similarity=-0.096 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHHHCCCCCEE
Q ss_conf 999999999998720213316
Q gi|254780548|r 15 INLCLLLVLIGGFFPTSIHAF 35 (447)
Q Consensus 15 ~~l~l~l~l~~~~~~~~a~A~ 35 (447)
++-++.++++.+..+..++|+
T Consensus 3 ~l~~~~~~~l~~~~~~~~~ae 23 (206)
T PRK10884 3 KLRLIGLTLLALSATAVSHAE 23 (206)
T ss_pred CCCHHHHHHHHHHHHHHHHHC
T ss_conf 401399999998645777521
No 369
>PRK09619 flgD flagellar basal body rod modification protein; Reviewed
Probab=25.02 E-value=31 Score=11.92 Aligned_cols=34 Identities=15% Similarity=0.336 Sum_probs=22.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCC
Q ss_conf 3035789999998620175145508655034667
Q gi|254780548|r 59 DELGGKVSEVVSKDLQRSDVFNLISQDSFKQKIT 92 (447)
Q Consensus 59 ~~~~~~i~~ii~~DL~~SG~F~~i~~~~~~~~~~ 92 (447)
..+.+++=+++..-|++--=+++.+...|..+..
T Consensus 29 ~~~qddFL~LL~aQLqNQDPl~PmDn~ef~aQLA 62 (220)
T PRK09619 29 EQLNNQFMTLLVAQIQNQDPLNPADGTEFVSQLA 62 (220)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 4679999999999985289999887789999999
No 370
>KOG2079 consensus
Probab=24.83 E-value=32 Score=11.89 Aligned_cols=82 Identities=15% Similarity=0.124 Sum_probs=41.3
Q ss_pred EEEECCCCCEEEEEEECC--CCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCE---EEEEECC
Q ss_conf 123114554026886217--64023455768998489985034676443037711797179974379852---4445515
Q gi|254780548|r 193 LCVMDRDGANIRYLTPSR--DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI---LAPRFSS 267 (447)
Q Consensus 193 l~i~d~DG~n~~~l~~~~--~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~---~~p~wSP 267 (447)
+-..|+-| |.+++..+. ...+-+-+++.||+.++ ..+. ...|.++|...+...+.++.+...+ ....|.-
T Consensus 111 vl~~d~~~-nL~~~~~ne~v~~~Vtsvafn~dg~~l~-~G~~---~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~v~~t~ 185 (1206)
T KOG2079 111 VLLSDMTG-NLGPLHQNERVQGPVTSVAFNQDGSLLL-AGLG---DGHVTVWDMHRAKILKVITEHGAPVTGVIFVGRTS 185 (1206)
T ss_pred HHHHHHHC-CCCHHHCCCCCCCCCEEEEECCCCCEEC-CCCC---CCCEEEEECCCCCCEEEEEECCCCCCEEEEEEEEC
T ss_conf 02455540-2244540875677621467637883661-5567---87289998567750346640588651699999837
Q ss_pred CCCEEEEEECCCC
Q ss_conf 8955677413787
Q gi|254780548|r 268 NGKRALISVQKDE 280 (447)
Q Consensus 268 DG~~la~~~s~~g 280 (447)
++. .+++....|
T Consensus 186 ~nS-~llt~D~~G 197 (1206)
T KOG2079 186 QNS-KLLTSDTGG 197 (1206)
T ss_pred CCC-EEEECCCCC
T ss_conf 973-899705887
No 371
>pfam05596 Taeniidae_ag Taeniidae antigen. This family consists of several antigen proteins from Taenia and Echinococcus (tapeworm) species.
Probab=24.53 E-value=11 Score=14.93 Aligned_cols=15 Identities=33% Similarity=0.674 Sum_probs=9.0
Q ss_pred CCCCCCCHHHHHHHH
Q ss_conf 567753035789999
Q gi|254780548|r 54 KFVSIDELGGKVSEV 68 (447)
Q Consensus 54 ~f~~~~~~~~~i~~i 68 (447)
.|-..+++|.+|.++
T Consensus 41 ~FF~~DPlGkkia~l 55 (84)
T pfam05596 41 RFFREDPLGQKLAQL 55 (84)
T ss_pred HHHHCCCCHHHHHHH
T ss_conf 987449706899999
No 372
>PRK13879 conjugal transfer protein TrbJ; Provisional
Probab=24.17 E-value=33 Score=11.81 Aligned_cols=28 Identities=25% Similarity=0.291 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 7767999999999999987202133169
Q gi|254780548|r 9 EELNMKINLCLLLVLIGGFFPTSIHAFV 36 (447)
Q Consensus 9 ~~~~m~~~l~l~l~l~~~~~~~~a~A~~ 36 (447)
..+.+|+.|..+++..+++...+++|.+
T Consensus 2 ~~~~~k~~~~~~~~~~~~~~~~pa~A~~ 29 (254)
T PRK13879 2 KFLAAKLALVVALLASGTLAVTPVQAGI 29 (254)
T ss_pred CHHHHHHHHHHHHHHHHCCCCCHHHCCC
T ss_conf 0788899999999986114687342387
No 373
>PRK10959 outer membrane protein W; Provisional
Probab=23.99 E-value=31 Score=11.99 Aligned_cols=22 Identities=23% Similarity=0.147 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 99999999999998720213316
Q gi|254780548|r 13 MKINLCLLLVLIGGFFPTSIHAF 35 (447)
Q Consensus 13 m~~~l~l~l~l~~~~~~~~a~A~ 35 (447)
||+.++.++++. ++++.+|+|+
T Consensus 1 Mkk~~~a~~~~~-a~~s~~A~A~ 22 (212)
T PRK10959 1 MKKLTVAALAVA-TLLSGSAFAH 22 (212)
T ss_pred CCHHHHHHHHHH-HHHHHHHHHH
T ss_conf 937899999999-8751677883
No 374
>COG5298 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.75 E-value=33 Score=11.76 Aligned_cols=23 Identities=26% Similarity=0.404 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 99999999999998720213316
Q gi|254780548|r 13 MKINLCLLLVLIGGFFPTSIHAF 35 (447)
Q Consensus 13 m~~~l~l~l~l~~~~~~~~a~A~ 35 (447)
|++.||+.++|+|+.++.+.+++
T Consensus 1 ~~~~l~i~~llfca~~s~s~~~q 23 (530)
T COG5298 1 MRKKLIISILLFCAAFSVSTHPQ 23 (530)
T ss_pred CCHHHHHHHHHHHHHEECCCCCC
T ss_conf 92447789999887335004777
No 375
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=23.70 E-value=33 Score=11.75 Aligned_cols=34 Identities=24% Similarity=0.324 Sum_probs=16.9
Q ss_pred CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 86642004630567753035789999998620175
Q gi|254780548|r 43 ANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77 (447)
Q Consensus 43 ~~~~pi~IAv~~f~~~~~~~~~i~~ii~~DL~~SG 77 (447)
....+++|||..|-.++.+-+.+. =+..-|.--|
T Consensus 26 ~~~~~~~VaI~~~veHpaLd~~~~-G~~~aLk~~G 59 (322)
T COG2984 26 AAADQITVAITQFVEHPALDAARE-GVKEALKDAG 59 (322)
T ss_pred CCCCCEEEEEEEEECCHHHHHHHH-HHHHHHHHCC
T ss_conf 444433688998506655999999-7899998648
No 376
>KOG0104 consensus
Probab=23.51 E-value=34 Score=11.73 Aligned_cols=16 Identities=31% Similarity=0.472 Sum_probs=7.1
Q ss_pred EEEECCCCCCCEEEEEC
Q ss_conf 99971586642004630
Q gi|254780548|r 37 KVATNSANYSPVSIAFT 53 (447)
Q Consensus 37 ~i~It~~~~~pi~IAv~ 53 (447)
.+.+-+++ .|+-||+-
T Consensus 35 Kv~vVkPG-vPmeIvLn 50 (902)
T KOG0104 35 KVAVVKPG-VPMEIVLN 50 (902)
T ss_pred EEEEECCC-CCEEEEEC
T ss_conf 78883499-97078645
No 377
>PRK12789 flgI flagellar basal body P-ring protein; Reviewed
Probab=23.17 E-value=34 Score=11.69 Aligned_cols=66 Identities=11% Similarity=0.056 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEE---EEEEECCCCCCCE-EEE-ECCCCCCCCH---HHHHHHHHHHHHHCCCC
Q ss_conf 799999999999998720213316---9999715866420-046-3056775303---57899999986201751
Q gi|254780548|r 12 NMKINLCLLLVLIGGFFPTSIHAF---VKVATNSANYSPV-SIA-FTKFVSIDEL---GGKVSEVVSKDLQRSDV 78 (447)
Q Consensus 12 ~m~~~l~l~l~l~~~~~~~~a~A~---~~i~It~~~~~pi-~IA-v~~f~~~~~~---~~~i~~ii~~DL~~SG~ 78 (447)
|||++++++++++ ++++..+.|. ....|.+...+++ ... |.-..|.++- ..--.+-+.+=|++-|.
T Consensus 1 m~~~~~~~~~~~l-~~~~~~~~a~RIkDi~~v~GvR~NqLiGYGLVVGL~GTGD~~~~~~fT~qsl~nmL~~~Gv 74 (367)
T PRK12789 1 MIRRLLLAVLLAL-LAGPAAAAATRIKDIATLQGVRDNQLVGYGLVTGLQGTGDTLRNSQFTEQSLQSMLDRMGI 74 (367)
T ss_pred CHHHHHHHHHHHH-HHCCCHHHHHHHHHHEEEEEEEECCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCC
T ss_conf 9089999999999-8553066666564020040024435567789981388788877785289999999997696
No 378
>KOG2247 consensus
Probab=22.90 E-value=13 Score=14.55 Aligned_cols=35 Identities=17% Similarity=0.385 Sum_probs=17.8
Q ss_pred CHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEECCCCCC--EECCC
Q ss_conf 778874156218999997404662257899984155542--00002
Q gi|254780548|r 99 RFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK--QIIGK 142 (447)
Q Consensus 99 ~f~~W~~~gad~lv~G~i~~~~~~~~~v~~~L~dv~~~~--~i~~~ 142 (447)
.+-.|+.-+-+ ++.|. ++-+.++|+-...+ .+.||
T Consensus 121 sll~wsKg~~e-l~ig~--------~~gn~viynhgtsR~iiv~Gk 157 (615)
T KOG2247 121 SLLAWSKGTPE-LVIGN--------NAGNIVIYNHGTSRRIIVMGK 157 (615)
T ss_pred HHHHHCCCCCC-CCCCC--------CCCCEEEEECCCHHHHHHHCC
T ss_conf 78754657730-02234--------324469971551344445052
No 379
>COG3017 LolB Outer membrane lipoprotein involved in outer membrane biogenesis [Cell envelope biogenesis, outer membrane]
Probab=22.85 E-value=35 Score=11.64 Aligned_cols=60 Identities=17% Similarity=0.246 Sum_probs=28.6
Q ss_pred HHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEEC--CCCCEEEEEEECCCCCEEEEEECCC--CCEEEEEEECC
Q ss_conf 9899999750445555441788751367644210012311--4554026886217640234557689--98489985034
Q gi|254780548|r 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD--RDGANIRYLTPSRDQILFEPRFSPN--QQKVAYATYDD 233 (447)
Q Consensus 158 ~ad~i~~~ltG~~G~f~triafv~~~~~~~~~~~~l~i~d--~DG~n~~~l~~~~~~~~~sP~wSpD--G~~Iay~s~~~ 233 (447)
-|+++.+.+||-+=+-+. -+.|+-- .+|+.- +|... .....-.|.-| |=.+-|..|..
T Consensus 116 ~ae~Ll~el~G~~lPl~~---------------L~~Wi~G~P~~~~~y-rl~~~--~~l~~~ty~~~~~gW~v~Yl~y~~ 177 (206)
T COG3017 116 DAEELLQELTGMDLPLES---------------LRDWIRGLPGPGTDY-RLDDD--ARLRHFTYEQDGSGWQVRYLRYNT 177 (206)
T ss_pred CHHHHHHHHHCCCCCHHH---------------HHHHHHCCCCCCCCE-EECCC--CCCCCEEEEECCCCEEEEEEEECC
T ss_conf 799999996688664789---------------999984698999870-65544--566424797338730899987527
Q ss_pred CC
Q ss_conf 67
Q gi|254780548|r 234 ED 235 (447)
Q Consensus 234 ~~ 235 (447)
.+
T Consensus 178 ~~ 179 (206)
T COG3017 178 QN 179 (206)
T ss_pred CC
T ss_conf 88
No 380
>COG3470 Tpd Uncharacterized protein probably involved in high-affinity Fe2+ transport [Inorganic ion transport and metabolism]
Probab=22.82 E-value=35 Score=11.64 Aligned_cols=45 Identities=22% Similarity=0.144 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHHHCCC--CCEEEEEEECCCCC-CCEEEEECCCC
Q ss_conf 79999999999999872021--33169999715866-42004630567
Q gi|254780548|r 12 NMKINLCLLLVLIGGFFPTS--IHAFVKVATNSANY-SPVSIAFTKFV 56 (447)
Q Consensus 12 ~m~~~l~l~l~l~~~~~~~~--a~A~~~i~It~~~~-~pi~IAv~~f~ 56 (447)
.|+++|+-.++++..+.+.+ +.+.-++-|.++.. .++-||-+=|+
T Consensus 2 ~~~k~l~~~~~~a~v~s~~a~~~a~~~E~Pigep~evg~meiaaVYlQ 49 (179)
T COG3470 2 KMKKLLLSAAILASVFSAPAEGAAAFKEVPIGEPIEVGGMEIAAVYLQ 49 (179)
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEE
T ss_conf 168999999999999741000023446346899732187489999962
No 381
>pfam07622 DUF1583 Protein of unknown function (DUF1583). Most of these Rhodopirellula baltica hypothetical proteins also match pfam07619.
Probab=22.30 E-value=35 Score=11.57 Aligned_cols=25 Identities=16% Similarity=0.120 Sum_probs=11.0
Q ss_pred EECCCCCEEEEEEECCCCCEEEEECC
Q ss_conf 97149915799998899967996627
Q gi|254780548|r 364 TKFSGEKFAIGVMKKDGSQERLLVED 389 (447)
Q Consensus 364 ~~~~~~~~~i~~~~~~g~~~~~lt~~ 389 (447)
+++.+..|.++- .-|+...++|.+.
T Consensus 317 vRRGd~I~yLFA-~~DS~qfrLi~~e 341 (400)
T pfam07622 317 VRRGDTIHYLFA-EGDSDQFRLIGSE 341 (400)
T ss_pred EECCCEEEEEEE-CCCCCEEEEEEEC
T ss_conf 981875899996-1897628996443
No 382
>pfam09403 FadA Adhesion protein FadA. FadA (Fusobacterium adhesin A) is an adhesin which forms two alpha helices.
Probab=22.23 E-value=35 Score=11.56 Aligned_cols=15 Identities=20% Similarity=0.323 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999987
Q gi|254780548|r 13 MKINLCLLLVLIGGF 27 (447)
Q Consensus 13 m~~~l~l~l~l~~~~ 27 (447)
||+++.+.+++++++
T Consensus 1 MkK~ll~~~llls~~ 15 (126)
T pfam09403 1 MKKILLCSMLILSSL 15 (126)
T ss_pred CHHHHHHHHHHHHHH
T ss_conf 916999999999999
No 383
>pfam07424 TrbM TrbM. This family contains the bacterial protein TrbM (approximately 180 residues long). In Comamonas testosteroni T-2, TrbM is derived from the IncP1beta plasmid pTSA, which encodes the widespread genes for p-toluenesulfonate (TSA) degradation.
Probab=21.85 E-value=36 Score=11.51 Aligned_cols=23 Identities=26% Similarity=0.236 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 99999999999998720213316
Q gi|254780548|r 13 MKINLCLLLVLIGGFFPTSIHAF 35 (447)
Q Consensus 13 m~~~l~l~l~l~~~~~~~~a~A~ 35 (447)
||+.++.+.+.+..+.+..|.+.
T Consensus 1 MKK~ll~~al~~~~~~s~~A~~~ 23 (189)
T pfam07424 1 MKKILLAVALAFGMFGSASAQKL 23 (189)
T ss_pred CCHHHHHHHHHHHHHHCCCCCHH
T ss_conf 92017999999999714764200
No 384
>PRK08661 prolyl-tRNA synthetase; Provisional
Probab=21.65 E-value=36 Score=11.49 Aligned_cols=19 Identities=5% Similarity=0.235 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHCCCCEEE
Q ss_conf 7899999986201751455
Q gi|254780548|r 63 GKVSEVVSKDLQRSDVFNL 81 (447)
Q Consensus 63 ~~i~~ii~~DL~~SG~F~~ 81 (447)
+.|.++++.-+..+|.-++
T Consensus 49 ~~i~~~~~~~~~~~g~~~~ 67 (478)
T PRK08661 49 ENIQKILDEMFKETGHENV 67 (478)
T ss_pred HHHHHHHHHHHHHCCCEEE
T ss_conf 9999999999986398087
No 385
>KOG0285 consensus
Probab=21.62 E-value=36 Score=11.48 Aligned_cols=11 Identities=18% Similarity=0.525 Sum_probs=6.4
Q ss_pred CCCCC-CCCCCC
Q ss_conf 73675-316557
Q gi|254780548|r 436 YASDP-QWVGFM 446 (447)
Q Consensus 436 ~~~~P-~WsP~~ 446 (447)
+.++| +|-|-+
T Consensus 444 ~EthPl~w~P~~ 455 (460)
T KOG0285 444 EETHPLNWKPEL 455 (460)
T ss_pred CCCCCCCCCCCH
T ss_conf 556776789705
No 386
>PRK11901 hypothetical protein; Reviewed
Probab=21.62 E-value=36 Score=11.48 Aligned_cols=21 Identities=24% Similarity=0.328 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 777679999999999999872
Q gi|254780548|r 8 AEELNMKINLCLLLVLIGGFF 28 (447)
Q Consensus 8 ~~~~~m~~~l~l~l~l~~~~~ 28 (447)
+..|||-+.++.||+|+..+.
T Consensus 35 RQh~MiGiGILVLLLLIIgIg 55 (329)
T PRK11901 35 RQHMMIGIGILVLLLLIIAIG 55 (329)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
T ss_conf 888999999999999999865
No 387
>PRK10431 N-acetylmuramoyl-l-alanine amidase II; Provisional
Probab=21.29 E-value=37 Score=11.44 Aligned_cols=18 Identities=17% Similarity=0.134 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHHHH
Q ss_conf 767999999999999987
Q gi|254780548|r 10 ELNMKINLCLLLVLIGGF 27 (447)
Q Consensus 10 ~~~m~~~l~l~l~l~~~~ 27 (447)
+..||++||++++|++..
T Consensus 2 ~~~~r~~~~~~l~l~~~~ 19 (444)
T PRK10431 2 MYRIRNWLVATLLLLCAQ 19 (444)
T ss_pred HHHHHHHHHHHHHHHHHH
T ss_conf 179999999999998767
No 388
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=21.08 E-value=37 Score=11.41 Aligned_cols=18 Identities=11% Similarity=-0.042 Sum_probs=11.8
Q ss_pred EEEEEEEECCCCCCEECC
Q ss_conf 578999841555420000
Q gi|254780548|r 124 LRVEFRLWDVKDRKQIIG 141 (447)
Q Consensus 124 ~~v~~~L~dv~~~~~i~~ 141 (447)
=.+..|.||+.++.-+-+
T Consensus 134 D~~~~re~Dlet~~fv~~ 151 (648)
T COG1505 134 DAGITREFDLETGEFVEE 151 (648)
T ss_pred CCEEEEEEEECCCCCCCC
T ss_conf 622899987023653468
No 389
>pfam10697 DUF2502 Protein of unknown function (DUF2502). Members of this family are all Gammaproteobacteria. The function is not known.
Probab=20.94 E-value=38 Score=11.39 Aligned_cols=14 Identities=14% Similarity=0.057 Sum_probs=5.4
Q ss_pred HHCCCCCEEEEEEEC
Q ss_conf 720213316999971
Q gi|254780548|r 27 FFPTSIHAFVKVATN 41 (447)
Q Consensus 27 ~~~~~a~A~~~i~It 41 (447)
+.+.+|.|. +|++.
T Consensus 10 ~~Pl~a~a~-~I~l~ 23 (96)
T pfam10697 10 VAPLAAQAG-SITLL 23 (96)
T ss_pred HHHHHCCCC-CEEEC
T ss_conf 625441655-16864
No 390
>PRK09967 putative outer membrane lipoprotein; Provisional
Probab=20.64 E-value=38 Score=11.35 Aligned_cols=27 Identities=4% Similarity=-0.170 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCEEEEE
Q ss_conf 999989999975044555544178875
Q gi|254780548|r 155 AHTISDDIYQSITGEKGDFNSRILFVS 181 (447)
Q Consensus 155 ah~~ad~i~~~ltG~~G~f~triafv~ 181 (447)
..+=|+-+.+.|.-..|+-.+||.-++
T Consensus 105 S~rRA~aV~~~l~~~g~i~~~ri~~~g 131 (160)
T PRK09967 105 SLKRANVVADAWAMGGQIPRSNLTTQG 131 (160)
T ss_pred HHHHHHHHHHHHHHCCCCCCCEEEEEE
T ss_conf 999999999999853785443589996
No 391
>TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, subunit D; InterPro: IPR011956 This entry describes the D subunit of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA. This family shows sequence similarity to the A subunit (IPR011954 from INTERPRO) and to the 2-hydroxyglutaryl-CoA dehydratase alpha chain..
Probab=20.49 E-value=38 Score=11.33 Aligned_cols=62 Identities=18% Similarity=0.303 Sum_probs=42.3
Q ss_pred CCCEEEEEEEEECCCCCC-EECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCC
Q ss_conf 662257899984155542-0000232337778899999998999997504455554417887513676
Q gi|254780548|r 120 GKDRLRVEFRLWDVKDRK-QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186 (447)
Q Consensus 120 ~~~~~~v~~~L~dv~~~~-~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~f~triafv~~~~~~ 186 (447)
|.| .++..||.|...+ ..++|+..-... +--.+++.++|..|.-+.|...+-+.|+..++..
T Consensus 9 GtG--a~k~v~f~v~Gd~~~~l~kr~~r~rq---rdP~kla~~~y~~ll~e~Gl~~~dv~y~attGeG 71 (262)
T TIGR02261 9 GTG--AVKVVLFRVEGDKERCLAKRVERVRQ---RDPLKLAEEIYDDLLREAGLKAADVDYVATTGEG 71 (262)
T ss_pred CCC--EEEEEEEEEECCHHHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHCCHHHHHHHHEECCCC
T ss_conf 466--16789887507346676655554321---3614678999998887504102202221004786
No 392
>PRK10159 outer membrane phosphoporin protein E; Provisional
Probab=20.37 E-value=39 Score=11.31 Aligned_cols=22 Identities=27% Similarity=0.164 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 99999999999998720213316
Q gi|254780548|r 13 MKINLCLLLVLIGGFFPTSIHAF 35 (447)
Q Consensus 13 m~~~l~l~l~l~~~~~~~~a~A~ 35 (447)
|||.++.+++.. ++.+.++.|.
T Consensus 1 MKk~~lA~ai~a-~l~s~~a~Aa 22 (351)
T PRK10159 1 MKKSTLALVVMG-IVASASVQAA 22 (351)
T ss_pred CCHHHHHHHHHH-HHHCCCCCEE
T ss_conf 947389999999-9872653179
No 393
>pfam03058 Sar8_2 Sar8.2 family. Members of this family are found in Solanaceae plants, a taxonomic group (family) that includes pepper and tobacco plant species. Synthesis of these proteins is induced by tobacco mosaic virus (TMV) and salicylic acid; indeed they are thought to be involved in the development of systemic acquired resistance (SAR) after an initial hypersensitive response to microbial infection. SAR is characterized by long-lasting resistance to infection by a wide range of pathogens, extending to plant tissues distant from the initial infection site.
Probab=20.04 E-value=39 Score=11.27 Aligned_cols=26 Identities=23% Similarity=0.295 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 567776799999999999998720213316
Q gi|254780548|r 6 FIAEELNMKINLCLLLVLIGGFFPTSIHAF 35 (447)
Q Consensus 6 f~~~~~~m~~~l~l~l~l~~~~~~~~a~A~ 35 (447)
|.|+. ++||+.+..+..+.+.+++|.
T Consensus 2 fSKt~----lFlClSLaIlliviSsQ~dAR 27 (85)
T pfam03058 2 FSKTI----LFLCLSLAILLMVISSQADAR 27 (85)
T ss_pred CCCHH----HHHHHHHHHHHHHHHHHHHHH
T ss_conf 65101----499999999999998587588
No 394
>COG3419 PilY1 Tfp pilus assembly protein, tip-associated adhesin PilY1 [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=20.04 E-value=39 Score=11.27 Aligned_cols=20 Identities=20% Similarity=0.478 Sum_probs=9.4
Q ss_pred EEEEECCCCCCCEEEEEECCCC
Q ss_conf 8997237765331576402567
Q gi|254780548|r 316 IVFESDREGKEQLYVMQSNGSD 337 (447)
Q Consensus 316 I~f~Sdr~G~~qiy~~~~~g~~ 337 (447)
++|.-|++|+ +|+.|+.|..
T Consensus 774 ~aYAGDl~Gn--lWRFdLsg~~ 793 (1036)
T COG3419 774 YAYAGDLGGN--LWRFDLSGNA 793 (1036)
T ss_pred EEEEECCCCC--EEEEEECCCC
T ss_conf 8875036783--7999835899
Done!