HHsearch alignment for GI: 254780548 and conserved domain: pfam06433
>pfam06433 Me-amine-dh_H Methylamine dehydrogenase heavy chain (MADH). Methylamine dehydrogenase (EC:1.4.99.3) a periplasmic quinoprotein found in several methyltrophic bacteria. Induced when grown on methylamine as a carbon source MADH catalyses the oxidative deamination of amines to there corresponding aldehydes. MADH is a hetero- tetramer, comprised of two heavy chains (H) and two light chains (L). The H-chain forms a beta-propeller like structure.
Probab=97.61 E-value=0.0052 Score=37.22 Aligned_cols=251 Identities=15% Similarity=0.184 Sum_probs=131.6
Q ss_pred CCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEE-E-CC----CCCCCCCEEEECCCC
Q ss_conf 41788751367644210012311455402688621764023455768998489985-0-34----676443037711797
Q gi|254780548|r 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-Y-DD----EDILRVYLMDTRIDR 248 (447)
Q Consensus 175 triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s-~-~~----~~~~~i~~~~~~~g~ 248 (447)
T Consensus 2 ~~r~yv~~~~~~-~~~s~~yv~Dad~g~~lG~i~--~gf~~~~~~s~d~~~~y~a~T~~sR~~rG~RtDvV~v~D~~TL~ 78 (342)
T pfam06433 2 ARRVYVLDPGHF-AATTQVYTIDGNTGRLLGMTD--GGFLPNPVVASDGSFFAQASTVYSRIARGKRTDYVEVIDPQTHL 78 (342)
T ss_pred CEEEEEECCCHH-CCEEEEEEEECCCCCEEEECC--CCCCCCCEECCCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCC
T ss_conf 604899674141-126789999789885876334--56477617889998699998865134556520699997066576
Q ss_pred CE-E-EEECCCCC-----EEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEC
Q ss_conf 17-9-97437985-----24445515895567741378730389984047741100257764320255216747899723
Q gi|254780548|r 249 AP-K-RIGNFRSM-----ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321 (447)
Q Consensus 249 ~~-~-~~~~~~~~-----~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sd 321 (447)
T Consensus 79 p~~EI~iP~~pR~~~~~~~~~~~ls~d~k~l~v~-N~TPa~SVsVVDl~~~~~v~ei~tPGC---~~iyP~~~~~F~~~C 154 (342)
T pfam06433 79 PIADIELPEGPRFLVGTYPWMASLTPDNKTLLFY-QFSPSPAVGVVDLEGKAFVRMMDVPDC---YHIFPTANQTFFMHC 154 (342)
T ss_pred CCEEEECCCCHHHHCCCCCCCEEECCCCCEEEEE-CCCCCCEEEEEECCCCCEEEEECCCCE---EEEEECCCCCEEEEC
T ss_conf 2102788875244225653110236798689999-168876578998766605676068987---899646898727883
Q ss_pred CCCCCCEEEEEECCCCCCEEE--E--ECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEC--CCCC-C-
Q ss_conf 776533157640256741112--2--035300004687768889999714991579999889996799662--7875-5-
Q gi|254780548|r 322 REGKEQLYVMQSNGSDQKRIS--Q--DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNL-Q- 393 (447)
Q Consensus 322 r~G~~qiy~~~~~g~~~~rlT--~--~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~--~~~~-e- 393 (447)
T Consensus 155 gDG~l~~v~ld~~G~~~~~~~~~F~~~~dplf~~pa~~~~~g~~vf~sy~G---~V~~~~~s~~~~~~~~~w~~~~~~e~ 231 (342)
T pfam06433 155 RDGSLAQVGYDDKGNTKMKPTEVFHGEDEYLINHPAYSNKSGRLVWPTYTG---KIFQADLSSKGAKFLKPIEAFTEAEK 231 (342)
T ss_pred CCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCEECCCCEEEEEEECC---EEEEEECCCCCCEECCCCCCCCCCCC
T ss_conf 798507998379985003024543677753243653658887799996176---69997627775137477136786100
Q ss_pred CCEECCCCCEE-EE--------EEEECC------CCCEEEEEEEC-CCCCEEECCCCC
Q ss_conf 43788789989-99--------995089------87337999988-997147336788
Q gi|254780548|r 394 APTWSPSGRSL-IF--------SRKKDG------DTGSKLYSIDL-NGRNETLINTPA 435 (447)
Q Consensus 394 ~P~wSPDG~~i-~f--------~~~~~g------~~~~~l~~~~~-~G~~~~~~~~~g 435 (447)
T Consensus 232 a~~WRPGG~Q~~A~h~~~~~lyvlmh~g~~~tHkdpgteVWv~D~~t~krv~ri~L~~ 289 (342)
T pfam06433 232 ADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFVFVVDATTGKRLRKIELGH 289 (342)
T ss_pred CCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECCCC
T ss_conf 2584766215167755788099997379876413896289999888772999851888