HHsearch alignment for GI: 254780548 and conserved domain: pfam11768
>pfam11768 DUF3312 Protein of unknown function (DUF3312). This is a eukaryotic family of uncharacterized proteins.
Probab=92.99 E-value=0.53 Score=23.78 Aligned_cols=264 Identities=15% Similarity=0.146 Sum_probs=121.5
Q ss_pred HHHHHHCCCCEEEEEEEEECCCCEEEEEEEEECCCC---CCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC--C-
Q ss_conf 788741562189999974046622578999841555---4200002323377788999999989999975044555--5-
Q gi|254780548|r 100 FQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD---RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD--F- 173 (447)
Q Consensus 100 f~~W~~~gad~lv~G~i~~~~~~~~~v~~~L~dv~~---~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~--f- 173 (447)
T Consensus 40 ~~~Wk~~~~~qLll------snG-vlv~i~~-~~~~gdlekiv~DK~LvgKL-----~sd~isDav~t---~~~Ii~sf~ 103 (544)
T pfam11768 40 CSKWKNKYICQLLL------SNG-VLVHISL-NPFGGDLERVVFDKYLVGKL-----ISETITDAVLT---DSHILLSFL 103 (544)
T ss_pred EEEECCCCEEEEEE------CCC-EEEEEEE-CCCCCCEEEEEEEHHHHCCC-----CCCCEEEEEEC---CCEEEEEEC
T ss_conf 99964774599996------386-5999997-47888636999642232026-----66612105850---878999985
Q ss_pred -CCCEEEEEECCCCCCC--C-------EEEEEECCCCCEEE----EEEECCCCCEEEEEECCCCCEEEEE----EECCCC
Q ss_conf -4417887513676442--1-------00123114554026----8862176402345576899848998----503467
Q gi|254780548|r 174 -NSRILFVSESVVSGII--K-------NSLCVMDRDGANIR----YLTPSRDQILFEPRFSPNQQKVAYA----TYDDED 235 (447)
Q Consensus 174 -~triafv~~~~~~~~~--~-------~~l~i~d~DG~n~~----~l~~~~~~~~~sP~wSpDG~~Iay~----s~~~~~ 235 (447)
T Consensus 104 ~~nkL~~v~l~k~~~~~~~~eKlS~ldpKis~~~ipGp~~rk~~RhL~vN~~q-D~~vvWw~s~~~ev~PW~P~~-~e~d 181 (544)
T pfam11768 104 NENQLTFVQLQKPTARNRRLEKLSLMDPKISYVIIPGPTGRKLDRHLAVNSSQ-DLVVVWWPSSQNEVYPWRPTV-GDQD 181 (544)
T ss_pred CCCEEEEEEEECCCCCCCCCHHCCCCCCCEEEEECCCCCCCCCCEEEEECCCC-CEEEEECCCCCCCCCCCCCCC-CHHH
T ss_conf 87779999962465654440110257872478876788777353477651357-679997458887766889865-2110
Q ss_pred CCCCCEEEECCCCCEEEEECCC--CCEEEEEECCCCCEEEEEEC----CCCCE--EEEEEECCCCCCCCCCC--C--CCC
Q ss_conf 6443037711797179974379--85244455158955677413----78730--38998404774110025--7--764
Q gi|254780548|r 236 ILRVYLMDTRIDRAPKRIGNFR--SMILAPRFSSNGKRALISVQ----KDEAM--DIYSVDLQSNATERLTN--T--LFI 303 (447)
Q Consensus 236 ~~~i~~~~~~~g~~~~~~~~~~--~~~~~p~wSPDG~~la~~~s----~~g~~--~I~~~d~~~~~~~~lT~--~--~~~ 303 (447)
T Consensus 182 RANl~l~~~~~~-kLE~L~y~rTE~dPl~v~Fs~~~~~qi~tvEqkvs~~ge~~~D~c~YE~~~~k~qrvaVtsiPl~s~ 260 (544)
T pfam11768 182 RANLHVLKISGA-KLEVLCYCWTEGDPLDVDFSLLQPYQVHTVEQKVSKKGEPSADSCIYECARNKMRRVAVTSIPLRSQ 260 (544)
T ss_pred HCCEEEEEECCC-CEEEEEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEEEECCCEEEEEEEEEEECCCC
T ss_conf 021799984488-6589999961488468996248883799998753779985101689881367178899999724886
Q ss_pred CCCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCE
Q ss_conf 32025521674789972377653315764025674111220353000046877688899997149915799998899967
Q gi|254780548|r 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383 (447)
Q Consensus 304 d~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~ 383 (447)
T Consensus 261 v~~c~~n~~edkL~LGC~-D~S--ivLyD~~r-~~T~~~qa~-~~P~~~~WH~~gai~~-V~n~~GelQ~FD~ALs~i~~ 334 (544)
T pfam11768 261 VCSCARSPDEEKLLLGCI-DSS--LVLYDEHR-GVTLLAQAA-VIPHLVAWHPDSAIVL-VANEQGELQCFDIALSPIRM 334 (544)
T ss_pred CEEECCCCHHHEEEEECC-CCC--EEEEECCC-CEEEEEECC-CCCHHHEECCCCCEEE-EECCCCEEEEEEECCCCHHH
T ss_conf 235447831430686124-686--79874466-546765313-3522212268884899-83576416874200352122
Q ss_pred EEEEC
Q ss_conf 99662
Q gi|254780548|r 384 RLLVE 388 (447)
Q Consensus 384 ~~lt~ 388 (447)
T Consensus 335 qllsE 339 (544)
T pfam11768 335 QLLSE 339 (544)
T ss_pred HHHCC
T ss_conf 23305