RPSBLAST alignment for GI: 254780548 and conserved domain: COG0823
>gnl|CDD|31165 COG0823, TolB, Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]. Length = 425
Score = 249 bits (637), Expect = 9e-67
Identities = 142/431 (32%), Positives = 213/431 (49%), Gaps = 12/431 (2%)
Query: 20 LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE--LGGKVSEVVSKDLQRSD 77
+L+ I F + A V + NS SP+ IA F G +S +V+ DL+ S
Sbjct: 3 ILLAITLVFQVTA-ALVLIVINSGVDSPLPIAVVSFSPDGGALPGEDISGIVAADLKASG 61
Query: 78 VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
F + + + + + S P DW +LGA +V G+V R F+L+D
Sbjct: 62 KFIPLDRAGYIELPSGA-SEPLPPDWKALGADAVVLGQVTPSPDGSYRSSFQLFDTSTGF 120
Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
Q++G + R+ AHTI+D IY+ +TG KG F++RI +V+ES + L + D
Sbjct: 121 QLLGNSLVVTALLLRRAAHTIADAIYEKLTGIKGAFDTRIAYVAESDGGPLPYE-LALGD 179
Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
DG N + LT S IL P +SP+ +K+AY +++ R+Y +D + P I NF
Sbjct: 180 YDGYNQQKLTDSGSLILT-PAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRP-VILNFN 237
Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
AP FS +G + S +D + DIY +DL RLTN IN S S+SPD S+IV
Sbjct: 238 GNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPRLTNGFGINTSPSWSPDGSKIV 297
Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
F SDR G+ Q+Y+ GS R++ +PVWSP GD I F SG ++ I
Sbjct: 298 FTSDRGGRPQIYLYDLEGSQVTRLT-FSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKND 356
Query: 378 -KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-A 435
G + R+L ++P+W+P+GR ++FS GS L + L+GR +
Sbjct: 357 LASGGKIRILTSTYLNESPSWAPNGRMIMFS--SGQGGGSVLSLVSLDGRVSRPLPLADG 414
Query: 436 YASDPQWVGFM 446
P W +
Sbjct: 415 DVRVPAWSPVL 425