HHsearch alignment for GI: 254780549 and conserved domain: COG3064

>COG3064 TolA Membrane protein involved in colicin uptake [Cell envelope biogenesis, outer membrane].

Probab=98.99  E-value=1.4e-09  Score=73.81  Aligned_cols=84  Identities=20%  Similarity=0.333  Sum_probs=68.4

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCH-
Q ss_conf             0789999999999622546565553752999999987998185335640588860589999999999999718898884-
Q gi|254780549|r  175 SQDAIAIVRNRVIANWNIPSDFKRFKKLRVKMHFQLNQKGFVLGKINVDVVGGTELVRRMLRENARKAVIKSQAFRLSP-  253 (271)
Q Consensus       175 ~~~~~~~ir~~I~~~w~~p~~~~~~~~~~v~v~i~l~~~G~v~~~~~~~~~~~~~~~~~~~~~~a~rAi~~~~p~~~p~-  253 (271)
T Consensus       302 i~~Yag~ik~~Iq~rfl~~~sf---~gK~C~l~ikL~pdGtl~~~~~~---~Gd~----~lCqAalsAvAk~~kiP~pps  371 (387)
T COG3064         302 IDQYAGQIKSAIQSRFLDADSF---AGKTCRLRIKLAPDGTLLDIKPE---GGDP----ALCQAALSAVAKTAKIPKPPS  371 (387)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCC---CCCEEEEEEEECCCCCEEECCCC---CCCH----HHHHHHHHHHHHHCCCCCCCC
T ss_conf             7778899999999987515233---78636799887478632300006---7986----899999999987446999973


Q ss_pred             -HHHHHCCEEEEEECH
Q ss_conf             -677612228997444
Q gi|254780549|r  254 -STYKSWRNITLFFVP  268 (271)
Q Consensus       254 -~~y~~~~~~~~~F~p  268 (271)
T Consensus       372 qdVyEk~Kn~~l~fk~  387 (387)
T COG3064         372 QDVYEKFKNAPLDFKP  387 (387)
T ss_pred             HHHHHHHHCCCCCCCC
T ss_conf             6799997267877789