HHsearch alignment for GI: 254780551 and conserved domain: COG0811

>COG0811 TolQ Biopolymer transport proteins [Intracellular trafficking and secretion].
Probab=100.00  E-value=0  Score=317.53  Aligned_cols=212  Identities=33%  Similarity=0.560  Sum_probs=195.4

Q ss_pred             HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC--CHHHHHHHHHHH
Q ss_conf             998388879999999999999999999999999999975469999986228997899998202782--379999999999
Q gi|254780551|r   16 LFMQMGLAVKCIITLLFIFSILSWSVIIQKSVNFITLRRQFREFEQLFWSGQSLETVCKSLKNHHN--IGLAAIFMSAMS   93 (230)
Q Consensus        16 l~~~gg~~v~~Vm~~L~i~Si~~~~iiier~~~~~~~~~~~~~f~~~~~~~~~l~~~~~~l~~~~~--~~~~~i~~~~~~   93 (230)
T Consensus         1 ~~~~~~~~~~~v~~~l~~~sv~~w~ll~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (216)
T COG0811           1 LFLQADIVVKLVMILLLLGSVVSWPLLLLKILALALAGERLSLFEKRFWSGRSLEDAVLKLAESRDPLSALELIFASAIN   80 (216)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             96257799999999999998999999999999999999999999999813314999999877434400278899997767


Q ss_pred             HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH-HHHH
Q ss_conf             774431025689233899999999999999999998287125678643049999999999999999641135301-6777
Q gi|254780551|r   94 EWKKSCDKGARSPIGIQDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNN-VVSI  172 (230)
Q Consensus        94 ~~~~~~~~~~~~~~~~~e~i~~~le~~~~~e~~~l~~~l~~L~ti~s~AP~lGLlGTV~Gmi~aF~~ia~~g~~~-~~~a  172 (230)
T Consensus        81 ~~~~~~~~~~~~~~~~~e~~~~al~~~~~~~~~~l~~~L~~LatI~s~aP~lGL~GTV~GIm~aF~~i~~~~~~~~a~vA  160 (216)
T COG0811          81 ELRRIERAGLKLGAPLKERARRALEEAIAREERRLERGLTLLATIGSIAPFLGLLGTVWGIMPAFIGIGAGGGADLAVVA  160 (216)
T ss_pred             HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf             99999975421266658999999999999999998867759999998311888999999999999998567899999998


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             7799999999999999999999999999999999999999999999999998510
Q gi|254780551|r  173 PGIIESLISILLGLCVSIPSSIAYNKFIEDSKKFAMQMEGFANEFSAILSRQTEG  227 (230)
Q Consensus       173 ~GIseALitTa~GL~VAIPa~~~yn~l~~rv~~~~~~le~~a~~~~~~l~r~~~~  227 (230)
T Consensus       161 ~GIseAL~aTA~GL~vAIPAvi~yn~l~r~~~~~~~~~e~~~~~l~~~~~~~~~~  215 (216)
T COG0811         161 PGISEALIATAIGLFVAIPAVVAYNVLRRKVEELLAKLEDFAEELELILRRQYDT  215 (216)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             7899999999999999999999999999999999999999999999998221045