HHsearch alignment for GI: 254780551 and conserved domain: PRK06743
>PRK06743 flagellar motor protein MotP; Reviewed.
Probab=99.23 E-value=1.3e-09 Score=75.92 Aligned_cols=108 Identities=12% Similarity=0.240 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999998287125678643049999999999999999641135301677777999999999999999
Q gi|254780551|r 110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS 189 (230)
Q Consensus 110 ~e~i~~~le~~~~~e~~~l~~~l~~L~ti~s~AP~lGLlGTV~Gmi~aF~~ia~~g~~~~~~a~GIseALitTa~GL~VA 189 (230)
T Consensus 118 ~~~i~~~L~~ei~~~~~r~~~~~~v~~~~g~~APafGmiGTviGLI~mL~~l~----dp~~iG~~mAvAlvtTlYG~~lA 193 (254)
T PRK06743 118 EDELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNLQ----DTSQIGTGMAVAMLTTLYGSVLA 193 (254)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999889999999976437889999999999987269----99999899999999999999999
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9-9999999999999999999999999999999
Q gi|254780551|r 190 I-PSSIAYNKFIEDSKKFAMQMEGFANEFSAIL 221 (230)
Q Consensus 190 I-Pa~~~yn~l~~rv~~~~~~le~~a~~~~~~l 221 (230)
T Consensus 194 nl~flPiA~KL~~~~~~e~~~~~miiEGil~I~ 226 (254)
T PRK06743 194 NMIAIPLAEKVYRGIEDLYTEKKFVIEAISELY 226 (254)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999889999999899999999988