HHsearch alignment for GI: 254780551 and conserved domain: PRK06743

>PRK06743 flagellar motor protein MotP; Reviewed.
Probab=99.23  E-value=1.3e-09  Score=75.92  Aligned_cols=108  Identities=12%  Similarity=0.240  Sum_probs=80.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999998287125678643049999999999999999641135301677777999999999999999
Q gi|254780551|r  110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS  189 (230)
Q Consensus       110 ~e~i~~~le~~~~~e~~~l~~~l~~L~ti~s~AP~lGLlGTV~Gmi~aF~~ia~~g~~~~~~a~GIseALitTa~GL~VA  189 (230)
T Consensus       118 ~~~i~~~L~~ei~~~~~r~~~~~~v~~~~g~~APafGmiGTviGLI~mL~~l~----dp~~iG~~mAvAlvtTlYG~~lA  193 (254)
T PRK06743        118 EDELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGLIIMLQNLQ----DTSQIGTGMAVAMLTTLYGSVLA  193 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999889999999976437889999999999987269----99999899999999999999999


Q ss_pred             H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9-9999999999999999999999999999999
Q gi|254780551|r  190 I-PSSIAYNKFIEDSKKFAMQMEGFANEFSAIL  221 (230)
Q Consensus       190 I-Pa~~~yn~l~~rv~~~~~~le~~a~~~~~~l  221 (230)
T Consensus       194 nl~flPiA~KL~~~~~~e~~~~~miiEGil~I~  226 (254)
T PRK06743        194 NMIAIPLAEKVYRGIEDLYTEKKFVIEAISELY  226 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999889999999899999999988