HHsearch alignment for GI: 254780551 and conserved domain: PRK06926

>PRK06926 flagellar motor protein MotP; Reviewed.
Probab=99.16  E-value=3.2e-08  Score=67.76  Aligned_cols=108  Identities=14%  Similarity=0.179  Sum_probs=81.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999998287125678643049999999999999999641135301677777999999999999999
Q gi|254780551|r  110 QDRIDRMMDVAIARELEEITEKLSFLGSMSSAGLLVGILGAVLGMMGFFQSIAGYYSNNVVSIPGIIESLISILLGLCVS  189 (230)
Q Consensus       110 ~e~i~~~le~~~~~e~~~l~~~l~~L~ti~s~AP~lGLlGTV~Gmi~aF~~ia~~g~~~~~~a~GIseALitTa~GL~VA  189 (230)
T Consensus       126 ~~~i~~iLe~ei~~~~~r~~~~~~~~~~~g~~aPafGmiGTviGLI~mL~~l~---d-p~~iG~~mAvALvtTlYGv~lA  201 (272)
T PRK06926        126 EETIRDVMDSEIAAMEERHRKGRRLFEKAGEFAPAWGMIGTLVGLVLMLKNLN---D-PHTLGPNMAVALLTTLYGTLLA  201 (272)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---C-HHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999998888999999987258879999999999988169---9-9999888899999999999999


Q ss_pred             H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9-9999999999999999999999999999999
Q gi|254780551|r  190 I-PSSIAYNKFIEDSKKFAMQMEGFANEFSAIL  221 (230)
Q Consensus       190 I-Pa~~~yn~l~~rv~~~~~~le~~a~~~~~~l  221 (230)
T Consensus       202 n~~f~PiA~KL~~~~~~e~~~~~miieGil~I~  234 (272)
T PRK06926        202 NLVFIPIAAKLEEKTESEIFIKQVMIEGIIGVQ  234 (272)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999988999999888999999899999999987