HHsearch alignment for GI: 254780552 and conserved domain: CHL00026
>CHL00026 ycf2 Ycf2.
Probab=96.75 E-value=0.012 Score=35.72 Aligned_cols=179 Identities=17% Similarity=0.183 Sum_probs=85.6
Q ss_pred CEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCC-C-CCH----------------------------------------
Q ss_conf 0799737885577899999986189853125764-4-334----------------------------------------
Q gi|254780552|r 56 HVLFVGPPGLGKTTLAQVVARELGVNFRSTSGPV-I-AKA---------------------------------------- 93 (334)
Q Consensus 56 h~Lf~GPpG~GKTtlA~iiA~~l~~~~~~~s~~~-~-~~~---------------------------------------- 93 (334)
T Consensus 1632 GILlIGsieTGRSYLVK~LAanSYvPlI~I~lnklL~nkp~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~t~~~~~~ 1711 (2286)
T CHL00026 1632 GILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPKGFLIDDIDIDDSDDIDDSDDIDRDLDTELELLTMMNALT 1711 (2286)
T ss_pred CEEEECCCCCCHHHHHHHHHHCCCCCEEEECHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHH
T ss_conf 52797887666689999877426374089638998413864345554333223332221001000000112000000344
Q ss_pred HH----HH--HH-----HHHHHCCCHHHHHHHHHCCHHHH-----HHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEE
Q ss_conf 67----66--66-----66410163788875761698999-----99999863475100256787652000466740055
Q gi|254780552|r 94 GD----LA--AL-----LTNLEDRDVLFIDEIHRLSIIVE-----EILYPAMEDFQLDLMVGEGPSARSVKINLSRFTLI 157 (334)
Q Consensus 94 ~d----l~--~~-----~~~~~~~~vlfiDEihrl~~~~q-----~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f~lI 157 (334)
T Consensus 1712 ~~~~~~i~~~~i~LqFELAk~MSPCIIWIpnIHeLnvnd~~~l~LglL~n~ls~d~------e~~--st-----rNilVI 1778 (2286)
T CHL00026 1712 MDMMPEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDC------ERC--ST-----RNILVI 1778 (2286)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHCCCCCCCHHHHHHHHHHHCCCC------CCC--CC-----CCEEEE
T ss_conf 43233334444578899987549807961767660567762146999999842564------334--52-----451899
Q ss_pred ECCCCCCCCCHHHHH--CCCCEEECCCCCHHHHH---HHHHHHHHHCCCHHHHHH--HHHHHCCCCC-CHHHHHHHHHHH
Q ss_conf 204554335545442--01206732645479999---987776541210111111--1233202210-156788777543
Q gi|254780552|r 158 AATTRVGLLTNPLQD--RFGIPIRLNFYEIEDLK---TIVQRGAKLTGLAVTDEA--ACEIAMRSRG-TPRIAGRLLRRV 229 (334)
Q Consensus 158 ~ATt~~~~l~~~l~s--R~~~~~~~~~~~~~el~---~il~~~~~~~~i~~~~~a--l~~ia~~s~G-d~R~AlnlLe~v 229 (334)
T Consensus 1779 ASTHiPqKVDPALIaPNRLdt~IniR~l~ipQr~K~F~iLl~---tkGF~lek~~f~~n~FGS~T~GynaRDL~aL~NEa 1855 (2286)
T CHL00026 1779 ASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSY---TRGFHLEKKMFHTNGFGSITMGSNARDLVALTNEA 1855 (2286)
T ss_pred ECCCCCCCCCHHHCCCCCHHHHEEEHCCCCHHHHHHHHHEEE---CCCCEECCCCCCCCCCCCEECCCCHHHHHHHHHHH
T ss_conf 706787766811058530203112000466665414443000---35511125555546656400588778899986546
Q ss_pred HHHHHHHCCCCCCHHHHHHHH
Q ss_conf 334554158864277878765
Q gi|254780552|r 230 RDFAEVAHAKTITREIADAAL 250 (334)
Q Consensus 230 ~d~a~~~~~~~i~~~~~~~~l 250 (334)
T Consensus 1856 L~ISItq~KSiIdtnTIr~Al 1876 (2286)
T CHL00026 1856 LSISITQKKSIIDTNTIRSAL 1876 (2286)
T ss_pred HEEEEECCCCEEECCHHHHHH
T ss_conf 313330476354021288999