HHsearch alignment for GI: 254780552 and conserved domain: CHL00195

Probab=99.86  E-value=1.7e-20  Score=144.81  Aligned_cols=205  Identities=18%  Similarity=0.152  Sum_probs=133.1

Q ss_pred             CCHHHHCCHHHHHHHHHH----HHHHHHHCC-CCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC------H
Q ss_conf             987782397999999999----999866146-77670799737885577899999986189853125764433------4
Q gi|254780552|r   25 RTLEEFTGQVEACSNLKV----FIEAAKARA-EALDHVLFVGPPGLGKTTLAQVVARELGVNFRSTSGPVIAK------A   93 (334)
Q Consensus        25 ~~l~dviGQ~~~~~~l~~----~i~a~~~~~-~~~~h~Lf~GPpG~GKTtlA~iiA~~l~~~~~~~s~~~~~~------~   93 (334)
T Consensus       225 ~~~~~vGGl~~lK~wl~~r~~~f~~~a~~~gl~~PkGvLL~GpPG~GKtl~AKAvA~e~~~p~l~l~~~~l~~~~vGesE  304 (491)
T CHL00195        225 EKISDIGGLDNLKDWLKKRSTSFSKQAENYGLPTPRGLLLVGIQGTGKSLTAKAIANEWNLPLLRLDVGKLFGGIVGESE  304 (491)
T ss_pred             CCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCHHH
T ss_conf             98041468899999999988986233664599999879997999987899999998663894699667997560067049


Q ss_pred             HHHHHHHHHHH--CCCHHHHHHHHHC-C-----------HHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEEC
Q ss_conf             67666666410--1637888757616-9-----------89999999986347510025678765200046674005520
Q gi|254780552|r   94 GDLAALLTNLE--DRDVLFIDEIHRL-S-----------IIVEEILYPAMEDFQLDLMVGEGPSARSVKINLSRFTLIAA  159 (334)
Q Consensus        94 ~dl~~~~~~~~--~~~vlfiDEihrl-~-----------~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f~lI~A  159 (334)
T Consensus       305 ~~~r~~f~~A~~~aP~ilfiDEidk~~~~~~~~~d~g~s~rv~~~~Lt~m~e~~------------------~~VfViat  366 (491)
T CHL00195        305 SRMRQMIQLAETISPCILWIDEIDKAFSGLDSKGDSGTSNRVLATFITWLSEKK------------------SPVFVVAT  366 (491)
T ss_pred             HHHHHHHHHHHHHCCEEEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC------------------CCEEEEEE
T ss_conf             999999999986198589974654542588888887232899999999864689------------------97699995


Q ss_pred             CCCCCCCCHHHHH--CCCCEEECCCCCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHCCCCC----CHHHHHHHHHHHHHH
Q ss_conf             4554335545442--0120673264547999998777654121-01111111233202210----156788777543334
Q gi|254780552|r  160 TTRVGLLTNPLQD--RFGIPIRLNFYEIEDLKTIVQRGAKLTG-LAVTDEAACEIAMRSRG----TPRIAGRLLRRVRDF  232 (334)
Q Consensus       160 Tt~~~~l~~~l~s--R~~~~~~~~~~~~~el~~il~~~~~~~~-i~~~~~al~~ia~~s~G----d~R~AlnlLe~v~d~  232 (334)
T Consensus       367 tN~~~~L~pellR~GRFD~~~~v~lP~~~~R~~I~~ihl~~~~~~~~~~~d~~~la~~t~gfsGAeIe~~v~---~A~~~  443 (491)
T CHL00195        367 ANNIDSLPLELLRKGRFDEIFFLDLPNLEERELIFKIHLKRFRPNSWQNYDIEILSQLTNKFSGAEIEQSII---EAMHH  443 (491)
T ss_pred             CCCCCCCCHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHH---HHHHH
T ss_conf             899755898770898777047648959899999999998544788755469999997685988899999999---99999


Q ss_pred             HHHHCCCCCCHHHHHHHHH
Q ss_conf             5541588642778787654
Q gi|254780552|r  233 AEVAHAKTITREIADAALL  251 (334)
Q Consensus       233 a~~~~~~~i~~~~~~~~l~  251 (334)
T Consensus       444 A-~~~~r~~~~~dl~~a~~  461 (491)
T CHL00195        444 A-FSEKREFTTEDICLALK  461 (491)
T ss_pred             H-HHCCCCCCHHHHHHHHH
T ss_conf             9-87588665899999998