HHsearch alignment for GI: 254780552 and conserved domain: COG0593

>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair].
Probab=99.70  E-value=5.7e-15  Score=111.06  Aligned_cols=256  Identities=20%  Similarity=0.227  Sum_probs=160.7

Q ss_pred             HCCCC-CHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCC-----CCCCCCCCCCCCHH
Q ss_conf             50789-8778239799999999999986614677670799737885577899999986189-----85312576443346
Q gi|254780552|r   21 LLRPR-TLEEFTGQVEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVARELGV-----NFRSTSGPVIAKAG   94 (334)
Q Consensus        21 ~lRP~-~l~dviGQ~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l~~-----~~~~~s~~~~~~~~   94 (334)
T Consensus        79 ~l~~~ytFdnFv~g~~N~~A~aa~~~va~~~g~~~nplfi~G~~GlGKTHLl~Aign~~~~~~~~a~v~y~~se~f~--~  156 (408)
T COG0593          79 GLNPKYTFDNFVVGPSNRLAYAAAKAVAENPGGAYNPLFIYGGVGLGKTHLLQAIGNEALANGPNARVVYLTSEDFT--N  156 (408)
T ss_pred             CCCCCCCHHHEEECCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHH--H
T ss_conf             68988855422047744999999999875668868957998799997899999999999862998648850489989--9


Q ss_pred             HHHHH---------HHHHHCCCHHHHHHHHHCCHH--HHHHHHHHH----HCCCCCCCCCCCCCCCEEECCCCCCEEEEC
Q ss_conf             76666---------664101637888757616989--999999986----347510025678765200046674005520
Q gi|254780552|r   95 DLAAL---------LTNLEDRDVLFIDEIHRLSII--VEEILYPAM----EDFQLDLMVGEGPSARSVKINLSRFTLIAA  159 (334)
Q Consensus        95 dl~~~---------~~~~~~~~vlfiDEihrl~~~--~q~~Ll~~m----E~~~i~i~~~~~~~a~~~~~~~~~f~lI~A  159 (334)
T Consensus       157 ~~v~a~~~~~~~~Fk~~y-~~dlllIDDiq~l~gk~~~qeefFh~FN~l~~~~k---------------------qIvlt  214 (408)
T COG0593         157 DFVKALRDNEMEKFKEKY-SLDLLLIDDIQFLAGKERTQEEFFHTFNALLENGK---------------------QIVLT  214 (408)
T ss_pred             HHHHHHHHHHHHHHHHHH-CCCEEEECHHHHHCCCHHHHHHHHHHHHHHHHCCC---------------------EEEEE
T ss_conf             999998850488888764-26735551386756771579999999998885088---------------------79997


Q ss_pred             CCCCCC----CCHHHHHCCC--CEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             455433----5545442012--0673264547999998777654121011111112332022101567887775433345
Q gi|254780552|r  160 TTRVGL----LTNPLQDRFG--IPIRLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMRSRGTPRIAGRLLRRVRDFA  233 (334)
Q Consensus       160 Tt~~~~----l~~~l~sR~~--~~~~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~~s~Gd~R~AlnlLe~v~d~a  233 (334)
T Consensus       215 sdr~P~~l~~~~~rL~SR~~~Gl~~~I~~Pd~e~r~aiL~kka~~~~~~i~~ev~~~la~~~~~nvReLegaL~~l~~~a  294 (408)
T COG0593         215 SDRPPKELNGLEDRLRSRLEWGLVVEIEPPDDETRLAILRKKAEDRGIEIPDEVLEFLAKRLDRNVRELEGALNRLDAFA  294 (408)
T ss_pred             CCCCCHHHCCCCHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf             07883221103588998986305775279888999999999998658888879999999970030999999999999999


Q ss_pred             HHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC---CCCHHHHHHHHHHHHH
Q ss_conf             541588642778787654210000004677688999999751866206999999828745---6746789999998343
Q gi|254780552|r  234 EVAHAKTITREIADAALLRLAIDKMGFDQLDLRYLTMIARNFGGGPVGIETISAGLSEPR---DAIEDLIEPYMIQQGF  309 (334)
Q Consensus       234 ~~~~~~~i~~~~~~~~l~~~~id~~Gl~~~d~~~L~~l~~~~~~g~~~~~~isA~~ks~R---gS~~daa~~yL~r~g~  309 (334)
T Consensus       295 ~~~~~-~iTi~~v~e~L~~~~~~~~~iti--e~I~~~Va~~y~v~------~~dl~s~~R~~~i~~~RqiamyL~r~lt  364 (408)
T COG0593         295 LFTKR-AITIDLVKEILKDLLRAGEKITI--EDIQKIVAEYYNVK------VSDLLSKSRTRNIVRPRQIAMYLARELT  364 (408)
T ss_pred             HHCCC-CCCHHHHHHHHHHHHHCCCCCCH--HHHHHHHHHHHCCC------HHHHHCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf             85387-57699999999986401455899--99999999884988------9996245666234319999999999871