HHsearch alignment for GI: 254780552 and conserved domain: COG0606
>COG0606 Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones].
Probab=99.87 E-value=1.3e-22 Score=157.73 Aligned_cols=215 Identities=27% Similarity=0.367 Sum_probs=124.5
Q ss_pred CCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCC----CC------CCCCCCCCCCC--
Q ss_conf 9877823979999999999998661467767079973788557789999998618----98------53125764433--
Q gi|254780552|r 25 RTLEEFTGQVEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVARELG----VN------FRSTSGPVIAK-- 92 (334)
Q Consensus 25 ~~l~dviGQ~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l~----~~------~~~~s~~~~~~-- 92 (334)
T Consensus 176 ~D~~DV~GQ~~AKrAleiA--AAG-----gHnLl~~GpPGtGKTmla~Rl~~lLPpls~~E~lE~s~I~s~~~~~~~~~~ 248 (490)
T COG0606 176 PDFKDVKGQEQAKRALEIA--AAG-----GHNLLLVGPPGTGKTMLASRLPGLLPPLSIPEALEVSAIHSLAGDLHEGCP 248 (490)
T ss_pred CCHHHHCCCHHHHHHHHHH--HHC-----CCCEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 6666643849999999999--843-----886787569988656764231025999870888999888763543246786
Q ss_pred ---------H---HHHHHHH----------HHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECC
Q ss_conf ---------4---6766666----------64101637888757616989999999986347510025678765200046
Q gi|254780552|r 93 ---------A---GDLAALL----------TNLEDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSARSVKIN 150 (334)
Q Consensus 93 ---------~---~dl~~~~----------~~~~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~ 150 (334)
T Consensus 249 ~~~~rPFr~PHHsaS~~aLvGGG~~p~PGeIsLAH~GVLFLDElpef~~~iLe~LR~PLE~g~i~IsRa~~----~v~y- 323 (490)
T COG0606 249 LKIHRPFRAPHHSASLAALVGGGGVPRPGEISLAHNGVLFLDELPEFKRSILEALREPLENGKIIISRAGS----KVTY- 323 (490)
T ss_pred CCEECCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCC----EEEE-
T ss_conf 41107876887402288973789988987354303877886144210599999973741258179997587----1687-
Q ss_pred CCCCEEEECCCCC-----------------------CCCCHHHHHCCCCEEECCCCCHHHHHH----------HHHHH--
Q ss_conf 6740055204554-----------------------335545442012067326454799999----------87776--
Q gi|254780552|r 151 LSRFTLIAATTRV-----------------------GLLTNPLQDRFGIPIRLNFYEIEDLKT----------IVQRG-- 195 (334)
Q Consensus 151 ~~~f~lI~ATt~~-----------------------~~l~~~l~sR~~~~~~~~~~~~~el~~----------il~~~-- 195 (334)
T Consensus 324 pa~Fqlv~AmNpcpcG~~~~~~~~C~c~~~~~~~Y~~klSgp~lDRiDl~vev~~~~~~e~~~~~~~~ess~~v~~rVa~ 403 (490)
T COG0606 324 PARFQLVAAMNPCPCGNLGAPLRRCPCSPRQIKRYLNKLSGPFLDRIDLMVEVPRLSAGELIRQVPTGESSAGVRERVAK 403 (490)
T ss_pred EEEEEEHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 21267752239997647888777757887887788987437877552411004678978761478989875889999999
Q ss_pred --------HHH--CCCHHHHHHHHHHHCCCC--------------CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf --------541--210111111123320221--------------01567887775433345541588642778787654
Q gi|254780552|r 196 --------AKL--TGLAVTDEAACEIAMRSR--------------GTPRIAGRLLRRVRDFAEVAHAKTITREIADAALL 251 (334)
Q Consensus 196 --------~~~--~~i~~~~~al~~ia~~s~--------------Gd~R~AlnlLe~v~d~a~~~~~~~i~~~~~~~~l~ 251 (334)
T Consensus 404 AR~~Q~~R~~~~~~Na~l~~~~l~k~~~L~~~~~~~L~~al~~~~lS~R~~~rILKvarTiADL~g~~~i~~~hl~eAi~ 483 (490)
T COG0606 404 AREAQIARAGRIGINAELSEEALRKFCALQREDADLLKAALERLGLSARAYHRILKVARTIADLEGSEQIERSHLAEAIS 483 (490)
T ss_pred HHHHHHHHHHCCCCCHHCCHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 99999998535685421289999976265776799999999966205998998998876565124741344999999974