HHsearch alignment for GI: 254780552 and conserved domain: COG1239
>COG1239 ChlI Mg-chelatase subunit ChlI [Coenzyme metabolism].
Probab=99.75 E-value=2.9e-17 Score=125.09 Aligned_cols=215 Identities=24% Similarity=0.335 Sum_probs=141.9
Q ss_pred CHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHC-------CCCCCC--CC----------
Q ss_conf 87782397999999999999866146776707997378855778999999861-------898531--25----------
Q gi|254780552|r 26 TLEEFTGQVEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVAREL-------GVNFRS--TS---------- 86 (334)
Q Consensus 26 ~l~dviGQ~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l-------~~~~~~--~s---------- 86 (334)
T Consensus 15 pf~aivGqd~lk~aL~--l~av~---P~iggvLI~G~kGtaKSt~~Rala~LLp~~~~V~gc~f~cdP~~P~~~c~~c~~ 89 (423)
T COG1239 15 PFTAIVGQDPLKLALG--LNAVD---PQIGGALIAGEKGTAKSTLARALADLLPEIEVVIGCPFNCDPDDPEEMCDECRA 89 (423)
T ss_pred CHHHHCCCHHHHHHHH--HHHCC---CCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHH
T ss_conf 6565437537778876--53026---310426876688752779999999867963321688788998870555199986
Q ss_pred -------------------CCCCCCHHH-HH------HH------------HHHHHCCCHHHHHHHHHCCHHHHHHHHHH
Q ss_conf -------------------764433467-66------66------------66410163788875761698999999998
Q gi|254780552|r 87 -------------------GPVIAKAGD-LA------AL------------LTNLEDRDVLFIDEIHRLSIIVEEILYPA 128 (334)
Q Consensus 87 -------------------~~~~~~~~d-l~------~~------------~~~~~~~~vlfiDEihrl~~~~q~~Ll~~ 128 (334)
T Consensus 90 k~~e~~~~~~~~r~v~~v~lPl-~ateDrvvGslDi~ka~~~g~~af~PGlLa~A-nRGIlYvDEvnlL~d~lvd~LLd~ 167 (423)
T COG1239 90 KGDELEWLPREKRKVPFVALPL-GATEDRLVGSLDIEKALEEGPKAFQPGLLARA-NRGILYVDEVNLLDDHLVDALLDV 167 (423)
T ss_pred HCCCCCCCCCCCEECCEECCCC-CCCHHHHCCCCCHHHHHHCCCCCCCCCCHHHC-CCCEEEEECCCCCCHHHHHHHHHH
T ss_conf 2023244542210031223887-63043300456799997268300277511003-588798723343518999999999
Q ss_pred HHCCCCCCCCCCCCCCCEEECCCCCCEEEECCCC-CCCCCHHHHHCCCCEEECCCCC-HHHHHHHHHHHHHH--------
Q ss_conf 6347510025678765200046674005520455-4335545442012067326454-79999987776541--------
Q gi|254780552|r 129 MEDFQLDLMVGEGPSARSVKINLSRFTLIAATTR-VGLLTNPLQDRFGIPIRLNFYE-IEDLKTIVQRGAKL-------- 198 (334)
Q Consensus 129 mE~~~i~i~~~~~~~a~~~~~~~~~f~lI~ATt~-~~~l~~~l~sR~~~~~~~~~~~-~~el~~il~~~~~~-------- 198 (334)
T Consensus 168 aaeG~n~ver-eGis---i~h-pa~fvligTmNPEeGeLrpqLlDRfg~~v~~~~~~~~~~rv~Ii~r~~~f~~~Pe~f~ 242 (423)
T COG1239 168 AAEGVNDVER-EGIS---IRH-PARFLLIGTMNPEEGELRPQLLDRFGLEVDTHYPLDLEERVEIIRRRLAFEAVPEAFL 242 (423)
T ss_pred HHHCCCEEEE-CCEE---ECC-CCCEEEEEECCCCCCCCCHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 9717740335-7503---136-7617999644854466324667541115623478878888999999887500829999
Q ss_pred ---------------------CCCHHHHHHHHHHHCCC----CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf ---------------------21011111112332022----1015678877754333455415886427787876542
Q gi|254780552|r 199 ---------------------TGLAVTDEAACEIAMRS----RGTPRIAGRLLRRVRDFAEVAHAKTITREIADAALLR 252 (334)
Q Consensus 199 ---------------------~~i~~~~~al~~ia~~s----~Gd~R~AlnlLe~v~d~a~~~~~~~i~~~~~~~~l~~ 252 (334)
T Consensus 243 ~~~~~~~~~lR~~ii~ar~~l~~V~l~~~~~~~ia~~~~~~~v~g~radi~~~r~a~a~aa~~Gr~~v~~~Di~~a~~l 321 (423)
T COG1239 243 EKYADAQRALRARIIAARSLLSEVELDDDAETKIAELCARLAVDGHRADIVVVRAAKALAALRGRTEVEEEDIREAAEL 321 (423)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHH
T ss_conf 9999999999999999984466646767799999999998565787425678999999987539604520137777765