HHsearch alignment for GI: 254780552 and conserved domain: COG1419

Probab=97.49  E-value=0.00031  Score=45.39  Aligned_cols=66  Identities=36%  Similarity=0.537  Sum_probs=37.3

Q ss_pred             CEEEECCCCCCHHH-HHHHHHHHC------CCCCCCCCC------------------C--CCCCHHHHHHHHHHHHCCCH
Q ss_conf             07997378855778-999999861------898531257------------------6--44334676666664101637
Q gi|254780552|r   56 HVLFVGPPGLGKTT-LAQVVAREL------GVNFRSTSG------------------P--VIAKAGDLAALLTNLEDRDV  108 (334)
Q Consensus        56 h~Lf~GPpG~GKTt-lA~iiA~~l------~~~~~~~s~------------------~--~~~~~~dl~~~~~~~~~~~v  108 (334)
T Consensus       205 vi~LVGPTGVGKTTTlAKLAar~~~~~~~~kVaiITtDtYRIGA~EQLk~Ya~im~vp~~vv~~~~el~~ai~~l~~~d~  284 (407)
T COG1419         205 VIALVGPTGVGKTTTLAKLAARYVMLKKKKKVAIITTDTYRIGAVEQLKTYADIMGVPLEVVYSPKELAEAIEALRDCDV  284 (407)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCCE
T ss_conf             79998998875887999999999753257606899714411528999999999869955996399999999998531888


Q ss_pred             HHHHHHHHCCHHH
Q ss_conf             8887576169899
Q gi|254780552|r  109 LFIDEIHRLSIIV  121 (334)
Q Consensus       109 lfiDEihrl~~~~  121 (334)
T Consensus       285 ILVDTaGrs~~D~  297 (407)
T COG1419         285 ILVDTAGRSQYDK  297 (407)
T ss_pred             EEEECCCCCCCCH
T ss_conf             9996899883378