HHsearch alignment for GI: 254780552 and conserved domain: COG1474
>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones].
Probab=99.71 E-value=1.8e-16 Score=120.18 Aligned_cols=207 Identities=23% Similarity=0.320 Sum_probs=141.6
Q ss_pred HCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCC-----CCCCCCCCCCCHHHHH-------
Q ss_conf 2397999999999999866146776707997378855778999999861898-----5312576443346766-------
Q gi|254780552|r 30 FTGQVEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVARELGVN-----FRSTSGPVIAKAGDLA------- 97 (334)
Q Consensus 30 viGQ~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l~~~-----~~~~s~~~~~~~~dl~------- 97 (334)
T Consensus 19 l~~Re~ei~~l~~~l~~~~-~~~~p~n~~iyG~~GTGKT~~~~~v~~~l~~~~~~~~~~yINc~~~~t~~~i~~~i~~~~ 97 (366)
T COG1474 19 LPHREEEINQLASFLAPAL-RGERPSNIIIYGPTGTGKTATVKFVMEELEESSANVEVVYINCLELRTPYQVLSKILNKL 97 (366)
T ss_pred CCCHHHHHHHHHHHHHHHH-CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHH
T ss_conf 1034889999999999985-589986079988999873289999999997331567579995130787879999999982
Q ss_pred ---------------HHHHHH---HCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEEC
Q ss_conf ---------------666641---01637888757616989999999986347510025678765200046674005520
Q gi|254780552|r 98 ---------------ALLTNL---EDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSARSVKINLSRFTLIAA 159 (334)
Q Consensus 98 ---------------~~~~~~---~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f~lI~A 159 (334)
T Consensus 98 ~~~p~~g~~~~~~~~~l~~~~~~~~~~~IvvLDEid~L~~~~~~~LY~L~r~------~~~~-~--------~~v~vi~i 162 (366)
T COG1474 98 GKVPLTGDSSLEILKRLYDNLSKKGKTVIVILDEVDALVDKDGEVLYSLLRA------PGEN-K--------VKVSIIAV 162 (366)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCCCHHHHEECC------CCCC-C--------EEEEEEEE
T ss_conf 6899767632689999999777418759999764765415464145511124------7767-5--------37999997
Q ss_pred CCCCC---CCCHHHHHCCCC-EEECCCCCHHHHHHHHHHHHHH--CCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHHH
Q ss_conf 45543---355454420120-6732645479999987776541--210111111123320---22101567887775433
Q gi|254780552|r 160 TTRVG---LLTNPLQDRFGI-PIRLNFYEIEDLKTIVQRGAKL--TGLAVTDEAACEIAM---RSRGTPRIAGRLLRRVR 230 (334)
Q Consensus 160 Tt~~~---~l~~~l~sR~~~-~~~~~~~~~~el~~il~~~~~~--~~i~~~~~al~~ia~---~s~Gd~R~AlnlLe~v~ 230 (334)
T Consensus 163 ~n~~~~~~~ld~rv~s~l~~~~I~F~pY~a~el~~Il~~R~~~~~~~~~~~~~vl~lia~~~a~~~GDAR~aidilr~A~ 242 (366)
T COG1474 163 SNDDKFLDYLDPRVKSSLGPSEIVFPPYTAEELYDILRERVEEGFSAGVIDDDVLKLIAALVAAESGDARKAIDILRRAG 242 (366)
T ss_pred ECCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 35488999875667650687635528989899999999999854046874803999999988761864776089999999
Q ss_pred HHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 3455415886427787876542
Q gi|254780552|r 231 DFAEVAHAKTITREIADAALLR 252 (334)
Q Consensus 231 d~a~~~~~~~i~~~~~~~~l~~ 252 (334)
T Consensus 243 eiAe~~~~~~v~~~~v~~a~~~ 264 (366)
T COG1474 243 EIAEREGSRKVSEDHVREAQEE 264 (366)
T ss_pred HHHHHCCCCCCCHHHHHHHHHH
T ss_conf 9865407885370047889987