HHsearch alignment for GI: 254780552 and conserved domain: COG3283
>COG3283 TyrR Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism].
Probab=98.36 E-value=5.5e-06 Score=56.11 Aligned_cols=190 Identities=19% Similarity=0.236 Sum_probs=112.6
Q ss_pred CHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHC---CCCCCCCCCCCCC-----------
Q ss_conf 87782397999999999999866146776707997378855778999999861---8985312576443-----------
Q gi|254780552|r 26 TLEEFTGQVEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVAREL---GVNFRSTSGPVIA----------- 91 (334)
Q Consensus 26 ~l~dviGQ~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l---~~~~~~~s~~~~~----------- 91 (334)
T Consensus 202 ~F~~~v~~S~~mk~~---v~qA~k~AmlDAPLLI~GeTGTGKdLlAkaCH~~S~R~~~pFlalNCA~lPe~~aEsElFG~ 278 (511)
T COG3283 202 GFEQIVAVSPKMKHV---VEQAQKLAMLDAPLLITGETGTGKDLLAKACHLASPRHSKPFLALNCASLPEDAAESELFGH 278 (511)
T ss_pred CHHHHHHCCHHHHHH---HHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCC
T ss_conf 447787303999999---99998654037876874488861889999874438455897367644779666767777356
Q ss_pred CHH--HHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCC------
Q ss_conf 346--766666641016378887576169899999999863475100256787652000466740055204554------
Q gi|254780552|r 92 KAG--DLAALLTNLEDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSARSVKINLSRFTLIAATTRV------ 163 (334)
Q Consensus 92 ~~~--dl~~~~~~~~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f~lI~ATt~~------ 163 (334)
T Consensus 279 apg~~gk~GffE~AngGTV-lLDeIgEmSp~lQaKLLRFL~DGtFRR-VGee~E---v~v---dVRVIcatq~nL~~lv~ 350 (511)
T COG3283 279 APGDEGKKGFFEQANGGTV-LLDEIGEMSPRLQAKLLRFLNDGTFRR-VGEDHE---VHV---DVRVICATQVNLVELVQ 350 (511)
T ss_pred CCCCCCCCCHHHHCCCCEE-EEEHHHHCCHHHHHHHHHHHCCCCCCC-CCCCCE---EEE---EEEEEECCCCCHHHHHH
T ss_conf 8887776346340269748-850033249989999999862776000-377545---787---78999616666999986
Q ss_pred ------------CC--C-CHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCC---HHHHHHHHHHHCCC-CCCHHHHHH
Q ss_conf ------------33--5-54544201206732645479999987776541210---11111112332022-101567887
Q gi|254780552|r 164 ------------GL--L-TNPLQDRFGIPIRLNFYEIEDLKTIVQRGAKLTGL---AVTDEAACEIAMRS-RGTPRIAGR 224 (334)
Q Consensus 164 ------------~~--l-~~~l~sR~~~~~~~~~~~~~el~~il~~~~~~~~i---~~~~~al~~ia~~s-~Gd~R~Aln 224 (334)
T Consensus 351 ~g~fReDLfyRLNVLtl~~PpLRer~~---di~pL----~e~Fv~q~s~elg~p~pkl~~~~~~~L~~y~WpGNVRqL~N 423 (511)
T COG3283 351 KGKFREDLFYRLNVLTLNLPPLRERPQ---DIMPL----AELFVQQFSDELGVPRPKLAADLLTVLTRYAWPGNVRQLKN 423 (511)
T ss_pred CCCHHHHHHHHHHEEEECCCCCCCCCC---CCHHH----HHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHH
T ss_conf 372588788775013423885000652---10689----99999999997589987668789999987799960999999
Q ss_pred HHHHHHHHH
Q ss_conf 775433345
Q gi|254780552|r 225 LLRRVRDFA 233 (334)
Q Consensus 225 lLe~v~d~a 233 (334)
T Consensus 424 ~iyRA~s~~ 432 (511)
T COG3283 424 AIYRALTLL 432 (511)
T ss_pred HHHHHHHHH
T ss_conf 999999985