HHsearch alignment for GI: 254780552 and conserved domain: KOG0652

Probab=99.67  E-value=7e-16  Score=116.63  Aligned_cols=180  Identities=25%  Similarity=0.369  Sum_probs=117.3

Q ss_pred             CCC-CHHHHCCHHHHHHHHHHHHHHHHHC-------C-CCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC--
Q ss_conf             789-8778239799999999999986614-------6-7767079973788557789999998618985312576443--
Q gi|254780552|r   23 RPR-TLEEFTGQVEACSNLKVFIEAAKAR-------A-EALDHVLFVGPPGLGKTTLAQVVARELGVNFRSTSGPVIA--   91 (334)
Q Consensus        23 RP~-~l~dviGQ~~~~~~l~~~i~a~~~~-------~-~~~~h~Lf~GPpG~GKTtlA~iiA~~l~~~~~~~s~~~~~--   91 (334)
T Consensus       165 kPtE~YsDiGGldkQIqELvEAiVLpmth~ekF~~lgi~pPKGvLmYGPPGTGKTlmARAcAaqT~aTFLKLAgPQLVQM  244 (424)
T KOG0652         165 KPTEQYSDIGGLDKQIQELVEAIVLPMTHKEKFENLGIRPPKGVLMYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM  244 (424)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHCCHHHHHH
T ss_conf             87432000325789999999886145656878874688899722765799975779999998740106887326477766


Q ss_pred             ----CHHHHHHHHHHHH--CCCHHHHHHHHHCC-----------HHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCC
Q ss_conf             ----3467666666410--16378887576169-----------899999999863475100256787652000466740
Q gi|254780552|r   92 ----KAGDLAALLTNLE--DRDVLFIDEIHRLS-----------IIVEEILYPAMEDFQLDLMVGEGPSARSVKINLSRF  154 (334)
Q Consensus        92 ----~~~dl~~~~~~~~--~~~vlfiDEihrl~-----------~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f  154 (334)
T Consensus       245 fIGdGAkLVRDAFaLAKEkaP~IIFIDElDAIGtKRfDSek~GDREVQRTMLELLNQ--LD-----GFss~------~~v  311 (424)
T KOG0652         245 FIGDGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQ--LD-----GFSSD------DRV  311 (424)
T ss_pred             HHCCHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHH--CC-----CCCCC------CCE
T ss_conf             533418899999987533498389973002323343653123438999999999986--04-----89975------626


Q ss_pred             EEEECCCCCCCCCHHH-HH-CCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHH-HHHHHCCCCC
Q ss_conf             0552045543355454-42-01206732645479999987776541210111111-1233202210
Q gi|254780552|r  155 TLIAATTRVGLLTNPL-QD-RFGIPIRLNFYEIEDLKTIVQRGAKLTGLAVTDEA-ACEIAMRSRG  217 (334)
Q Consensus       155 ~lI~ATt~~~~l~~~l-~s-R~~~~~~~~~~~~~el~~il~~~~~~~~i~~~~~a-l~~ia~~s~G  217 (334)
T Consensus       312 KviAATNRvDiLDPALlRSGRLDRKIEfP~Pne~aRarIlQIHsRKMnv--~~DvNfeELaRsTdd  375 (424)
T KOG0652         312 KVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARILQIHSRKMNV--SDDVNFEELARSTDD  375 (424)
T ss_pred             EEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC--CCCCCHHHHHHCCCC
T ss_conf             7885216434348888644664444348899778988999886400577--888798998533356