HHsearch alignment for GI: 254780552 and conserved domain: KOG0735
>KOG0735 consensus.
Probab=99.12 E-value=3e-10 Score=82.22 Aligned_cols=219 Identities=16% Similarity=0.104 Sum_probs=128.2
Q ss_pred CCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCC----CCCCCCCCCC-----CH
Q ss_conf 78987782397999999999999866146776707997378855778999999861898----5312576443-----34
Q gi|254780552|r 23 RPRTLEEFTGQVEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVARELGVN----FRSTSGPVIA-----KA 93 (334)
Q Consensus 23 RP~~l~dviGQ~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l~~~----~~~~s~~~~~-----~~ 93 (334)
T Consensus 403 ~~~~e~d~i~~~s~kke~~n~~~sp---v~~~~~Ill~G~~GsGKT~L~kal~~~~~k~~~~hv~~v~Cs~l~~~~~e~i 479 (952)
T KOG0735 403 MSPFEHDFIQVPSYKKENANQELSP---VFRHGNILLNGPKGSGKTNLVKALFDYYSKDLIAHVEIVSCSTLDGSSLEKI 479 (952)
T ss_pred CCCCCCCEEECCHHHHHHHHHHCCC---CCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECHHCCCHHHHHH
T ss_conf 4767786244304555443230454---3346618986799877769999999875156506999975221042048999
Q ss_pred -HHHHHHHHHH--HCCCHHHHHHHHHCCH-----HHHHHHHHHHHCCCC-CCCCCCCCCCCEEECCCCCCEEEECCCCCC
Q ss_conf -6766666641--0163788875761698-----999999998634751-002567876520004667400552045543
Q gi|254780552|r 94 -GDLAALLTNL--EDRDVLFIDEIHRLSI-----IVEEILYPAMEDFQL-DLMVGEGPSARSVKINLSRFTLIAATTRVG 164 (334)
Q Consensus 94 -~dl~~~~~~~--~~~~vlfiDEihrl~~-----~~q~~Ll~~mE~~~i-~i~~~~~~~a~~~~~~~~~f~lI~ATt~~~ 164 (334)
T Consensus 480 Qk~l~~vfse~~~~~PSiIvLDdld~l~~~s~~e~~q~~~~~~rla~flnqvi~~y~~~~~-------~ia~Iat~qe~q 552 (952)
T KOG0735 480 QKFLNNVFSEALWYAPSIIVLDDLDCLASASSNENGQDGVVSERLAAFLNQVIKIYLKRNR-------KIAVIATGQELQ 552 (952)
T ss_pred HHHHHHHHHHHHHHCCCEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC-------EEEEEEECHHHH
T ss_conf 9999999999886378089970503540568444773028999999999999999870685-------799998514342
Q ss_pred CCCHHHHH--CCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHHHHHH----HC
Q ss_conf 35545442--012067326454799999877765412101111111233202210-156788777543334554----15
Q gi|254780552|r 165 LLTNPLQD--RFGIPIRLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMRSRG-TPRIAGRLLRRVRDFAEV----AH 237 (334)
Q Consensus 165 ~l~~~l~s--R~~~~~~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~~s~G-d~R~AlnlLe~v~d~a~~----~~ 237 (334)
T Consensus 553 tl~~~L~s~~~Fq~~~~L~ap~~~~R~~IL~~~~s~~~~~~~~~dLd~ls~~TEGy~~~DL~ifVeRai~~a~leris~~ 632 (952)
T KOG0735 553 TLNPLLVSPLLFQIVIALPAPAVTRRKEILTTIFSKNLSDITMDDLDFLSVKTEGYLATDLVIFVERAIHEAFLERISNG 632 (952)
T ss_pred HCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 03853347631478881589235679999999997553454567899888760784404479999999999998875167
Q ss_pred CCCCCHHHHHHHHH
Q ss_conf 88642778787654
Q gi|254780552|r 238 AKTITREIADAALL 251 (334)
Q Consensus 238 ~~~i~~~~~~~~l~ 251 (334)
T Consensus 633 ~klltke~f~ksL~ 646 (952)
T KOG0735 633 PKLLTKELFEKSLK 646 (952)
T ss_pred CCCCHHHHHHHHHH
T ss_conf 63101889999987