HHsearch alignment for GI: 254780552 and conserved domain: KOG0735

>KOG0735 consensus.
Probab=99.12  E-value=3e-10  Score=82.22  Aligned_cols=219  Identities=16%  Similarity=0.104  Sum_probs=128.2

Q ss_pred             CCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCC----CCCCCCCCCC-----CH
Q ss_conf             78987782397999999999999866146776707997378855778999999861898----5312576443-----34
Q gi|254780552|r   23 RPRTLEEFTGQVEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVARELGVN----FRSTSGPVIA-----KA   93 (334)
Q Consensus        23 RP~~l~dviGQ~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l~~~----~~~~s~~~~~-----~~   93 (334)
T Consensus       403 ~~~~e~d~i~~~s~kke~~n~~~sp---v~~~~~Ill~G~~GsGKT~L~kal~~~~~k~~~~hv~~v~Cs~l~~~~~e~i  479 (952)
T KOG0735         403 MSPFEHDFIQVPSYKKENANQELSP---VFRHGNILLNGPKGSGKTNLVKALFDYYSKDLIAHVEIVSCSTLDGSSLEKI  479 (952)
T ss_pred             CCCCCCCEEECCHHHHHHHHHHCCC---CCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECHHCCCHHHHHH
T ss_conf             4767786244304555443230454---3346618986799877769999999875156506999975221042048999


Q ss_pred             -HHHHHHHHHH--HCCCHHHHHHHHHCCH-----HHHHHHHHHHHCCCC-CCCCCCCCCCCEEECCCCCCEEEECCCCCC
Q ss_conf             -6766666641--0163788875761698-----999999998634751-002567876520004667400552045543
Q gi|254780552|r   94 -GDLAALLTNL--EDRDVLFIDEIHRLSI-----IVEEILYPAMEDFQL-DLMVGEGPSARSVKINLSRFTLIAATTRVG  164 (334)
Q Consensus        94 -~dl~~~~~~~--~~~~vlfiDEihrl~~-----~~q~~Ll~~mE~~~i-~i~~~~~~~a~~~~~~~~~f~lI~ATt~~~  164 (334)
T Consensus       480 Qk~l~~vfse~~~~~PSiIvLDdld~l~~~s~~e~~q~~~~~~rla~flnqvi~~y~~~~~-------~ia~Iat~qe~q  552 (952)
T KOG0735         480 QKFLNNVFSEALWYAPSIIVLDDLDCLASASSNENGQDGVVSERLAAFLNQVIKIYLKRNR-------KIAVIATGQELQ  552 (952)
T ss_pred             HHHHHHHHHHHHHHCCCEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC-------EEEEEEECHHHH
T ss_conf             9999999999886378089970503540568444773028999999999999999870685-------799998514342


Q ss_pred             CCCHHHHH--CCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHHHHHH----HC
Q ss_conf             35545442--012067326454799999877765412101111111233202210-156788777543334554----15
Q gi|254780552|r  165 LLTNPLQD--RFGIPIRLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMRSRG-TPRIAGRLLRRVRDFAEV----AH  237 (334)
Q Consensus       165 ~l~~~l~s--R~~~~~~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~~s~G-d~R~AlnlLe~v~d~a~~----~~  237 (334)
T Consensus       553 tl~~~L~s~~~Fq~~~~L~ap~~~~R~~IL~~~~s~~~~~~~~~dLd~ls~~TEGy~~~DL~ifVeRai~~a~leris~~  632 (952)
T KOG0735         553 TLNPLLVSPLLFQIVIALPAPAVTRRKEILTTIFSKNLSDITMDDLDFLSVKTEGYLATDLVIFVERAIHEAFLERISNG  632 (952)
T ss_pred             HCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             03853347631478881589235679999999997553454567899888760784404479999999999998875167


Q ss_pred             CCCCCHHHHHHHHH
Q ss_conf             88642778787654
Q gi|254780552|r  238 AKTITREIADAALL  251 (334)
Q Consensus       238 ~~~i~~~~~~~~l~  251 (334)
T Consensus       633 ~klltke~f~ksL~  646 (952)
T KOG0735         633 PKLLTKELFEKSLK  646 (952)
T ss_pred             CCCCHHHHHHHHHH
T ss_conf             63101889999987