HHsearch alignment for GI: 254780552 and conserved domain: KOG0923

Probab=95.82  E-value=0.0057  Score=37.69  Aligned_cols=71  Identities=37%  Similarity=0.592  Sum_probs=38.1

Q ss_pred             EEEECCCCCCHHH------------------------------HHHHHHHHCCCCCCCCCCCCC-------CC-------
Q ss_conf             7997378855778------------------------------999999861898531257644-------33-------
Q gi|254780552|r   57 VLFVGPPGLGKTT------------------------------LAQVVARELGVNFRSTSGPVI-------AK-------   92 (334)
Q Consensus        57 ~Lf~GPpG~GKTt------------------------------lA~iiA~~l~~~~~~~s~~~~-------~~-------   92 (334)
T Consensus       283 LiI~GeTGSGKTTQiPQyL~EaGytk~gk~IgcTQPRRVAAmSVAaRVA~EMgvkLG~eVGYsIRFEdcTSekTvlKYMT  362 (902)
T KOG0923         283 LIIVGETGSGKTTQIPQYLYEAGYTKGGKKIGCTQPRRVAAMSVAARVAEEMGVKLGHEVGYSIRFEDCTSEKTVLKYMT  362 (902)
T ss_pred             EEEECCCCCCCCCCCCHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEEC
T ss_conf             99975788986445628988542135894674068506887779999999857401431444888503567412243224


Q ss_pred             HHH-HHHHHH--HHHCCCHHHHHHHHHCCHHHHHHHHHH
Q ss_conf             467-666666--410163788875761698999999998
Q gi|254780552|r   93 AGD-LAALLT--NLEDRDVLFIDEIHRLSIIVEEILYPA  128 (334)
Q Consensus        93 ~~d-l~~~~~--~~~~~~vlfiDEihrl~~~~q~~Ll~~  128 (334)
T Consensus       363 DGmLlREfL~epdLasYSViiiDEAHERTL~-TDILfgL  400 (902)
T KOG0923         363 DGMLLREFLSEPDLASYSVIIVDEAHERTLH-TDILFGL  400 (902)
T ss_pred             CHHHHHHHHCCCCCCCEEEEEEEHHHHHHHH-HHHHHHH
T ss_conf             3067998714634223359996024320034-5679998