HHsearch alignment for GI: 254780552 and conserved domain: KOG0991

>KOG0991 consensus.
Probab=100.00  E-value=1.2e-32  Score=219.14  Aligned_cols=262  Identities=20%  Similarity=0.252  Sum_probs=181.0

Q ss_pred             CCCCCCCCHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHC-CCC----CC
Q ss_conf             8444412057875078987782397999999999999866146776707997378855778999999861-898----53
Q gi|254780552|r    9 SRNVSQEDADISLLRPRTLEEFTGQVEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVAREL-GVN----FR   83 (334)
Q Consensus         9 ~~~~~~~~~~~~~lRP~~l~dviGQ~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l-~~~----~~   83 (334)
T Consensus         8 ~~~~~~~l~wVeKYrP~~l~dIVGNe~tv~rl~via~~---g--nmP~liisGpPG~GKTTsi~~LAr~LLG~~~ke~vL   82 (333)
T KOG0991           8 SKSDKYQLPWVEKYRPSVLQDIVGNEDTVERLSVIAKE---G--NMPNLIISGPPGTGKTTSILCLARELLGDSYKEAVL   82 (333)
T ss_pred             CCCCCCCCHHHHHHCCHHHHHHHCCHHHHHHHHHHHHC---C--CCCCEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHH
T ss_conf             75311113578860852998821779899999999972---8--998667527999861648999999983806665763


Q ss_pred             CCCCCCCCCHHHHH-H---HHHHH------HCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf             12576443346766-6---66641------01637888757616989999999986347510025678765200046674
Q gi|254780552|r   84 STSGPVIAKAGDLA-A---LLTNL------EDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSARSVKINLSR  153 (334)
Q Consensus        84 ~~s~~~~~~~~dl~-~---~~~~~------~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~  153 (334)
T Consensus        83 ELNASdeRGI-DvVRn~IK~FAQ~kv~lp~grhKIiILDEADSMT~gAQQAlRRtMEiyS~-----------t-----tR  145 (333)
T KOG0991          83 ELNASDERGI-DVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTAGAQQALRRTMEIYSN-----------T-----TR  145 (333)
T ss_pred             HCCCCCCCCC-HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCC-----------C-----CH
T ss_conf             2057655460-89999999998720348998524899615220206899999999999706-----------3-----20


Q ss_pred             CEEEECCCCCCCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             00552045543355454420120673264547999998777654121011111112332022101567887775433345
Q gi|254780552|r  154 FTLIAATTRVGLLTNPLQDRFGIPIRLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMRSRGTPRIAGRLLRRVRDFA  233 (334)
Q Consensus       154 f~lI~ATt~~~~l~~~l~sR~~~~~~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~~s~Gd~R~AlnlLe~v~d~a  233 (334)
T Consensus       146 --FalaCN~s~KIiEPIQSRCAi-LRysklsd~qiL~Rl~~v~k~Ekv~yt~dgLeaiifta~GDMRQalNnLQst----  218 (333)
T KOG0991         146 --FALACNQSEKIIEPIQSRCAI-LRYSKLSDQQILKRLLEVAKAEKVNYTDDGLEAIIFTAQGDMRQALNNLQST----  218 (333)
T ss_pred             --HHHHHCCHHHHHHHHHHHHHH-HHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHH----
T ss_conf             --000015421322267734576-5322267899999999999870788771147785544166199999999987----


Q ss_pred             HHHCCCCCCHHHHHHHHHHHHC---CCC---HH-HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf             5415886427787876542100---000---04-6776889999997518662069999998287456746789999
Q gi|254780552|r  234 EVAHAKTITREIADAALLRLAI---DKM---GF-DQLDLRYLTMIARNFGGGPVGIETISAGLSEPRDAIEDLIEPY  303 (334)
Q Consensus       234 ~~~~~~~i~~~~~~~~l~~~~i---d~~---Gl-~~~d~~~L~~l~~~~~~g~~~~~~isA~~ks~RgS~~daa~~y  303 (334)
T Consensus       219 -~~g~g~Vn~enVfKv~d~PhP~~v~~ml~~~~~~~~~~-A~~il~~lw~lgysp~Dii~~~FRv~K~~~--~~E~~  291 (333)
T KOG0991         219 -VNGFGLVNQENVFKVCDEPHPLLVKKMLQACLKRNIDE-ALKILAELWKLGYSPEDIITTLFRVVKNMD--VAESL  291 (333)
T ss_pred             -HCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCHHH-HHHHHHHHHHCCCCHHHHHHHHHHHHHHCC--HHHHH
T ss_conf             -40545246323100069998599999999998612999-999999999748988999999999998425--78899