HHsearch alignment for GI: 254780552 and conserved domain: KOG0991
>KOG0991 consensus.
Probab=100.00 E-value=1.2e-32 Score=219.14 Aligned_cols=262 Identities=20% Similarity=0.252 Sum_probs=181.0
Q ss_pred CCCCCCCCHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHC-CCC----CC
Q ss_conf 8444412057875078987782397999999999999866146776707997378855778999999861-898----53
Q gi|254780552|r 9 SRNVSQEDADISLLRPRTLEEFTGQVEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVAREL-GVN----FR 83 (334)
Q Consensus 9 ~~~~~~~~~~~~~lRP~~l~dviGQ~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l-~~~----~~ 83 (334)
T Consensus 8 ~~~~~~~l~wVeKYrP~~l~dIVGNe~tv~rl~via~~---g--nmP~liisGpPG~GKTTsi~~LAr~LLG~~~ke~vL 82 (333)
T KOG0991 8 SKSDKYQLPWVEKYRPSVLQDIVGNEDTVERLSVIAKE---G--NMPNLIISGPPGTGKTTSILCLARELLGDSYKEAVL 82 (333)
T ss_pred CCCCCCCCHHHHHHCCHHHHHHHCCHHHHHHHHHHHHC---C--CCCCEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHH
T ss_conf 75311113578860852998821779899999999972---8--998667527999861648999999983806665763
Q ss_pred CCCCCCCCCHHHHH-H---HHHHH------HCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf 12576443346766-6---66641------01637888757616989999999986347510025678765200046674
Q gi|254780552|r 84 STSGPVIAKAGDLA-A---LLTNL------EDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSARSVKINLSR 153 (334)
Q Consensus 84 ~~s~~~~~~~~dl~-~---~~~~~------~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~ 153 (334)
T Consensus 83 ELNASdeRGI-DvVRn~IK~FAQ~kv~lp~grhKIiILDEADSMT~gAQQAlRRtMEiyS~-----------t-----tR 145 (333)
T KOG0991 83 ELNASDERGI-DVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTAGAQQALRRTMEIYSN-----------T-----TR 145 (333)
T ss_pred HCCCCCCCCC-HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCC-----------C-----CH
T ss_conf 2057655460-89999999998720348998524899615220206899999999999706-----------3-----20
Q ss_pred CEEEECCCCCCCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 00552045543355454420120673264547999998777654121011111112332022101567887775433345
Q gi|254780552|r 154 FTLIAATTRVGLLTNPLQDRFGIPIRLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMRSRGTPRIAGRLLRRVRDFA 233 (334)
Q Consensus 154 f~lI~ATt~~~~l~~~l~sR~~~~~~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~~s~Gd~R~AlnlLe~v~d~a 233 (334)
T Consensus 146 --FalaCN~s~KIiEPIQSRCAi-LRysklsd~qiL~Rl~~v~k~Ekv~yt~dgLeaiifta~GDMRQalNnLQst---- 218 (333)
T KOG0991 146 --FALACNQSEKIIEPIQSRCAI-LRYSKLSDQQILKRLLEVAKAEKVNYTDDGLEAIIFTAQGDMRQALNNLQST---- 218 (333)
T ss_pred --HHHHHCCHHHHHHHHHHHHHH-HHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHH----
T ss_conf --000015421322267734576-5322267899999999999870788771147785544166199999999987----
Q ss_pred HHHCCCCCCHHHHHHHHHHHHC---CCC---HH-HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 5415886427787876542100---000---04-6776889999997518662069999998287456746789999
Q gi|254780552|r 234 EVAHAKTITREIADAALLRLAI---DKM---GF-DQLDLRYLTMIARNFGGGPVGIETISAGLSEPRDAIEDLIEPY 303 (334)
Q Consensus 234 ~~~~~~~i~~~~~~~~l~~~~i---d~~---Gl-~~~d~~~L~~l~~~~~~g~~~~~~isA~~ks~RgS~~daa~~y 303 (334)
T Consensus 219 -~~g~g~Vn~enVfKv~d~PhP~~v~~ml~~~~~~~~~~-A~~il~~lw~lgysp~Dii~~~FRv~K~~~--~~E~~ 291 (333)
T KOG0991 219 -VNGFGLVNQENVFKVCDEPHPLLVKKMLQACLKRNIDE-ALKILAELWKLGYSPEDIITTLFRVVKNMD--VAESL 291 (333)
T ss_pred -HCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCHHH-HHHHHHHHHHCCCCHHHHHHHHHHHHHHCC--HHHHH
T ss_conf -40545246323100069998599999999998612999-999999999748988999999999998425--78899