HHsearch alignment for GI: 254780552 and conserved domain: KOG1970
>KOG1970 consensus.
Probab=99.67 E-value=2.3e-15 Score=113.47 Aligned_cols=202 Identities=20% Similarity=0.251 Sum_probs=127.1
Q ss_pred CCCCCCCCHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC--EEEECCCCCCHHHHHHHHHHHCCCCCCCCC
Q ss_conf 844441205787507898778239799999999999986614677670--799737885577899999986189853125
Q gi|254780552|r 9 SRNVSQEDADISLLRPRTLEEFTGQVEACSNLKVFIEAAKARAEALDH--VLFVGPPGLGKTTLAQVVARELGVNFRSTS 86 (334)
Q Consensus 9 ~~~~~~~~~~~~~lRP~~l~dviGQ~~~~~~l~~~i~a~~~~~~~~~h--~Lf~GPpG~GKTtlA~iiA~~l~~~~~~~s 86 (334)
T Consensus 63 ~~~~d~~elW~eKy~P~t~eeLAVHkkKI~eVk~WL~~~~~~~~~l~~~iLLltGPsGcGKSTtvkvLskelg~~~~Ew~ 142 (634)
T KOG1970 63 NEKEDEFELWVEKYKPRTLEELAVHKKKISEVKQWLKQVAEFTPKLGSRILLLTGPSGCGKSTTVKVLSKELGYQLIEWS 142 (634)
T ss_pred CCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCEEEEEC
T ss_conf 87733332257760856288875517748999999999997453667607998579888713199999986480212304
Q ss_pred CCCCCC----------------HHHHHH---H---------HHHH-----HCCCHHHHHHHHHCC-----HHHHHHHHHH
Q ss_conf 764433----------------467666---6---------6641-----016378887576169-----8999999998
Q gi|254780552|r 87 GPVIAK----------------AGDLAA---L---------LTNL-----EDRDVLFIDEIHRLS-----IIVEEILYPA 128 (334)
Q Consensus 87 ~~~~~~----------------~~dl~~---~---------~~~~-----~~~~vlfiDEihrl~-----~~~q~~Ll~~ 128 (334)
T Consensus 143 Npi~~~~~~~~h~~t~~~~~~~~s~L~~fesFler~~kyg~l~~~g~~~~~~~~liLveDLPn~~~~d~~~~f~evL~~y 222 (634)
T KOG1970 143 NPINLKEPENLHNETSFLMFPYQSQLAVFESFLLRATKYGSLQMSGDDLRTDKKLILVEDLPNQFYRDDSETFREVLRLY 222 (634)
T ss_pred CCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
T ss_conf 77665665554554400133036678999989999876231653133334675079850261444003699999999999
Q ss_pred HHCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCC-------CHH--HHHCCCCEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf 63475100256787652000466740055204554335-------545--442012067326454799999877765412
Q gi|254780552|r 129 MEDFQLDLMVGEGPSARSVKINLSRFTLIAATTRVGLL-------TNP--LQDRFGIPIRLNFYEIEDLKTIVQRGAKLT 199 (334)
Q Consensus 129 mE~~~i~i~~~~~~~a~~~~~~~~~f~lI~ATt~~~~l-------~~~--l~sR~~~~~~~~~~~~~el~~il~~~~~~~ 199 (334)
T Consensus 223 ~s~g~~------------------PlIf~iTd~~~~g~nnq~rlf~~d~q~~~ri~-~IsFNPIa~T~MKK~L~ric~~e 283 (634)
T KOG1970 223 VSIGRC------------------PLIFIITDSLSNGNNNQDRLFPKDIQEEPRIS-NISFNPIAPTIMKKFLKRICRIE 283 (634)
T ss_pred HHCCCC------------------CEEEEEECCCCCCCCCHHHHCHHHHHHCCCCC-EEEECCCCHHHHHHHHHHHHHHH
T ss_conf 845777------------------67999863535787634342426565335852-47615776799999999999986
Q ss_pred CCHHH------HHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 10111------1111233202210156788777543
Q gi|254780552|r 200 GLAVT------DEAACEIAMRSRGTPRIAGRLLRRV 229 (334)
Q Consensus 200 ~i~~~------~~al~~ia~~s~Gd~R~AlnlLe~v 229 (334)
T Consensus 284 ~~~~s~~k~~~~~~v~~i~~~s~GDIRsAInsLQls 319 (634)
T KOG1970 284 ANKKSGIKVPDTAEVELICQGSGGDIRSAINSLQLS 319 (634)
T ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 266666767506799999875277399998775332