HHsearch alignment for GI: 254780552 and conserved domain: KOG2227

Probab=99.03  E-value=2e-09  Score=77.09  Aligned_cols=196  Identities=20%  Similarity=0.233  Sum_probs=112.7

Q ss_pred             HHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCC-----CCCCCCCCCCCHHHH-HHHHH
Q ss_conf             782397999999999999866146776707997378855778999999861898-----531257644334676-66666
Q gi|254780552|r   28 EEFTGQVEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVARELGVN-----FRSTSGPVIAKAGDL-AALLT  101 (334)
Q Consensus        28 ~dviGQ~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l~~~-----~~~~s~~~~~~~~dl-~~~~~  101 (334)
T Consensus       150 ~~l~gRe~e~~~v~~F~~~hle-~~t~gSlYVsG~PGtgkt~~l~rvl~~~~~~~~~~~~v~inc~sl~~~~aiF~kI~~  228 (529)
T KOG2227         150 GTLKGRELEMDIVREFFSLHLE-LNTSGSLYVSGQPGTGKTALLSRVLDSLSKSSKSPVTVYINCTSLTEASAIFKKIFS  228 (529)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHH-CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHH
T ss_conf             7765258889999999985431-266764575179986548899999874034316651699851235425889999988


Q ss_pred             HH------------------------HCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEE
Q ss_conf             41------------------------016378887576169899999999863475100256787652000466740055
Q gi|254780552|r  102 NL------------------------EDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSARSVKINLSRFTLI  157 (334)
Q Consensus       102 ~~------------------------~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f~lI  157 (334)
T Consensus       229 ~~~q~~~s~~~~~~~~~~~~~h~~q~k~~~llVlDEmD~L~tr~~~vLy~lFew-------p~lp~--------sr~iLi  293 (529)
T KOG2227         229 SLLQDLVSPGTGMQHLEKFEKHTKQSKFMLLLVLDEMDHLITRSQTVLYTLFEW-------PKLPN--------SRIILI  293 (529)
T ss_pred             HHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHCCCCEEEEEHHC-------CCCCC--------CEEEEE
T ss_conf             898874289504789999999875256338987212567760465314321001-------36776--------605666


Q ss_pred             ECCCCCC---CCCHHHHHCCC---CEEECCCCCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHCC---CCCCHHHHHHHHH
Q ss_conf             2045543---35545442012---0673264547999998777654121-01111111233202---2101567887775
Q gi|254780552|r  158 AATTRVG---LLTNPLQDRFG---IPIRLNFYEIEDLKTIVQRGAKLTG-LAVTDEAACEIAMR---SRGTPRIAGRLLR  227 (334)
Q Consensus       158 ~ATt~~~---~l~~~l~sR~~---~~~~~~~~~~~el~~il~~~~~~~~-i~~~~~al~~ia~~---s~Gd~R~AlnlLe  227 (334)
T Consensus       294 GiANslDlTdR~LprL~~~~~~~P~~l~F~PYTk~qI~~Il~~rl~~~~t~~~~~~Aie~~ArKvaa~SGDlRkaLdv~R  373 (529)
T KOG2227         294 GIANSLDLTDRFLPRLNLDLTIKPKLLVFPPYTKDQIVEILQQRLSEESTSIFLNAAIELCARKVAAPSGDLRKALDVCR  373 (529)
T ss_pred             EEHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             40013557777766654025788746655687889999999999740544333038999999986257612899999998


Q ss_pred             HHHHHHHHHCCC
Q ss_conf             433345541588
Q gi|254780552|r  228 RVRDFAEVAHAK  239 (334)
Q Consensus       228 ~v~d~a~~~~~~  239 (334)
T Consensus       374 ~aiEI~E~e~r~  385 (529)
T KOG2227         374 RAIEIAEIEKRK  385 (529)
T ss_pred             HHHHHHHHHHHH
T ss_conf             788999998741