HHsearch alignment for GI: 254780552 and conserved domain: KOG2228
>KOG2228 consensus.
Probab=98.59 E-value=7.2e-06 Score=55.41 Aligned_cols=260 Identities=23% Similarity=0.320 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHH-HHHH--HHCCCCCC--CCCCCCCC-CH--H----------
Q ss_conf 799999999999986614677670799737885577899-9999--86189853--12576443-34--6----------
Q gi|254780552|r 33 QVEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLA-QVVA--RELGVNFR--STSGPVIA-KA--G---------- 94 (334)
Q Consensus 33 Q~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA-~iiA--~~l~~~~~--~~s~~~~~-~~--~---------- 94 (334)
T Consensus 33 ~~~l~~~lkqt~----~~gE-snsviiigprgsgkT~li~~~Ls~~q~~~E~~l~v~Lng~~~~dk~al~~I~rql~~e~ 107 (408)
T KOG2228 33 QKHLSELLKQTI----LHGE-SNSVIIIGPRGSGKTILIDTRLSDIQENGENFLLVRLNGELQTDKIALKGITRQLALEL 107 (408)
T ss_pred HHHHHHHHHHHH----HHCC-CCCEEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999----8447-77269981477881674077876677517727999878500155899999999999997
Q ss_pred ------------HHHHHHHHHHC------CCHHHH-HHHHHCCHH-HHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCC
Q ss_conf ------------76666664101------637888-757616989-9999999863475100256787652000466740
Q gi|254780552|r 95 ------------DLAALLTNLED------RDVLFI-DEIHRLSII-VEEILYPAMEDFQLDLMVGEGPSARSVKINLSRF 154 (334)
Q Consensus 95 ------------dl~~~~~~~~~------~~vlfi-DEihrl~~~-~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f 154 (334)
T Consensus 108 ~~~~k~~gsfte~l~~lL~~L~~~~~~t~~~ViFIldEfDlf~~h~rQtllYnlfD-----i----sqs~r------~Pi 172 (408)
T KOG2228 108 NRIVKSFGSFTENLSKLLEALKKGDETTSGKVIFILDEFDLFAPHSRQTLLYNLFD-----I----SQSAR------API 172 (408)
T ss_pred HHHHEEECCCCHHHHHHHHHHHCCCCCCCCEEEEEEEHHHCCCCCHHHHHHHHHHH-----H----HHHCC------CCE
T ss_conf 53212422533469999998733787788519998310002464035678999988-----8----76247------986
Q ss_pred EEEECCCCCCC---CCHHHHHCCCC--EEECCCCCHHHHHHHHHHHHHHCCCHHH-HHHHHHHHCCC---CCCHHHHHHH
Q ss_conf 05520455433---55454420120--6732645479999987776541210111-11112332022---1015678877
Q gi|254780552|r 155 TLIAATTRVGL---LTNPLQDRFGI--PIRLNFYEIEDLKTIVQRGAKLTGLAVT-DEAACEIAMRS---RGTPRIAGRL 225 (334)
Q Consensus 155 ~lI~ATt~~~~---l~~~l~sR~~~--~~~~~~~~~~el~~il~~~~~~~~i~~~-~~al~~ia~~s---~Gd~R~Alnl 225 (334)
T Consensus 173 ciig~Ttrld~lE~LEKRVKSRFshr~I~m~~~~~l~~yv~l~r~ll---~v~~e~~~~~~~wn~~~~~~L~d~~sl~k~ 249 (408)
T KOG2228 173 CIIGVTTRLDILELLEKRVKSRFSHRVIFMLPSLPLGDYVDLYRKLL---SVPAEFSDFAEKWNRSVQEVLSDHRSLSKN 249 (408)
T ss_pred EEEEEECCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHH---CCCCCCCCHHHHHHHHHHHHHCCHHHHHHH
T ss_conf 99985032338999999987433552462269888588999999973---577568608888776565764024557788
Q ss_pred HHHHHHHHH------HHCCCCCCHHHHHHHHHHHHCCCC-----HHHHHHHHHHHHHH---HHHCCCCCHHHHHHHHH-C
Q ss_conf 754333455------415886427787876542100000-----04677688999999---75186620699999982-8
Q gi|254780552|r 226 LRRVRDFAE------VAHAKTITREIADAALLRLAIDKM-----GFDQLDLRYLTMIA---RNFGGGPVGIETISAGL-S 290 (334)
Q Consensus 226 Le~v~d~a~------~~~~~~i~~~~~~~~l~~~~id~~-----Gl~~~d~~~L~~l~---~~~~~g~~~~~~isA~~-k 290 (334)
T Consensus 250 l~~~~~~l~~~l~~~vas~p~~ta~~~~~v~~~ys~d~Kie~l~gLSvLEL~LII~~~r~~~~ae~~sfNF~lvY~EfrK 329 (408)
T KOG2228 250 LRSLHDLLKNALNRLVASHPLMTAEDLAEVSRQYSVDPKIELLSGLSVLELYLIICMKRETLIAELNSFNFNLVYAEFRK 329 (408)
T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_conf 88756888755555540574012777899999846480777863736999999999899888875488649999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
Q ss_conf 74567467899999983430587189999998886648
Q gi|254780552|r 291 EPRDAIEDLIEPYMIQQGFIQRTPRGRLLMPIAWQHLG 328 (334)
Q Consensus 291 s~RgS~~daa~~yL~r~g~~~~~prgRrL~~~a~EdiG 328 (334)
T Consensus 330 ~ik-si~hTs~~~------------~k~vvlnAfEhL~ 354 (408)
T KOG2228 330 FIK-SIAHTSELW------------AKTVVLNAFEHLR 354 (408)
T ss_pred HHH-HHHHHHHHH------------HHHHHHHHHHHHH
T ss_conf 999-876689998------------6789999973213