HHsearch alignment for GI: 254780552 and conserved domain: PRK00411
>PRK00411 cdc6 cell division control protein 6; Reviewed.
Probab=99.90 E-value=1.1e-21 Score=152.07 Aligned_cols=213 Identities=24% Similarity=0.314 Sum_probs=149.0
Q ss_pred HHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHC-----CCCCCCCCCCCCCCHHH-------
Q ss_conf 782397999999999999866146776707997378855778999999861-----89853125764433467-------
Q gi|254780552|r 28 EEFTGQVEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVAREL-----GVNFRSTSGPVIAKAGD------- 95 (334)
Q Consensus 28 ~dviGQ~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l-----~~~~~~~s~~~~~~~~d------- 95 (334)
T Consensus 30 ~~l~~Re~Ei~~l~~~l~~~l~-g~~~~n~~I~G~pGTGKT~~vk~v~~~l~~~~~~~~~vyINc~~~~t~~~i~~~i~~ 108 (394)
T PRK00411 30 ENLPHREEQIEELAFALRPALR-GSRPSNVLILGPPGTGKTTTVKKVFEELEEAALKVVYVYINCQIDRTRYAILSEIAR 108 (394)
T ss_pred CCCCCHHHHHHHHHHHHHHHHC-CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHH
T ss_conf 9898859999999999999975-999984799889999899999999999997468965999969668989999999999
Q ss_pred ----------------HHH-HHHHHH---CCCHHHHHHHHHCC-HHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCC
Q ss_conf ----------------666-666410---16378887576169-899999999863475100256787652000466740
Q gi|254780552|r 96 ----------------LAA-LLTNLE---DRDVLFIDEIHRLS-IIVEEILYPAMEDFQLDLMVGEGPSARSVKINLSRF 154 (334)
Q Consensus 96 ----------------l~~-~~~~~~---~~~vlfiDEihrl~-~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f 154 (334)
T Consensus 109 ~L~~~~~p~~G~s~~~~~~~l~~~l~~~~~~~ivvLDEiD~L~~~~~~~vLY~L~r~~~------~~~~--------~~~ 174 (394)
T PRK00411 109 SLFGHPPPSSGLSFDELFDKIAEYLDERDRVLIVALDDINYLVEKEGNDVLYSLLRAHE------EYPG--------ARI 174 (394)
T ss_pred HHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCC------CCCC--------CCE
T ss_conf 95699898778789999999999861669758999965540203665089999985402------2688--------738
Q ss_pred EEEECCCCCC---CCCHHHHHCCC-CEEECCCCCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHCCC---CCCHHHHHHH
Q ss_conf 0552045543---35545442012-067326454799999877765412--1011111112332022---1015678877
Q gi|254780552|r 155 TLIAATTRVG---LLTNPLQDRFG-IPIRLNFYEIEDLKTIVQRGAKLT--GLAVTDEAACEIAMRS---RGTPRIAGRL 225 (334)
Q Consensus 155 ~lI~ATt~~~---~l~~~l~sR~~-~~~~~~~~~~~el~~il~~~~~~~--~i~~~~~al~~ia~~s---~Gd~R~Alnl 225 (334)
T Consensus 175 ~vI~IsN~~~~~~~Ldprv~S~l~~~~i~F~PY~~~qL~~IL~~R~~~af~~gv~~~~~i~~~A~~~a~~~GDaR~Aldl 254 (394)
T PRK00411 175 GVIGISSDLTFLYILDPRVKSVFGPEEIVFPPYTADEIFDILKDRVEEGFYPGVVSDEVLELIADLTGREHGDARVAIDL 254 (394)
T ss_pred EEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 99999768717766407775027862898589998999999999998414556789789999999985504758999999
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
Q ss_conf 754333455415886427787876542100
Q gi|254780552|r 226 LRRVRDFAEVAHAKTITREIADAALLRLAI 255 (334)
Q Consensus 226 Le~v~d~a~~~~~~~i~~~~~~~~l~~~~i 255 (334)
T Consensus 255 lr~A~e~Ae~~g~~~Vt~~hV~~A~~~~~~ 284 (394)
T PRK00411 255 LRRAGEIAEREGSRKVTEEDVRKAYEKSEP 284 (394)
T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
T ss_conf 999999999718996589999999998600