HHsearch alignment for GI: 254780552 and conserved domain: PRK04040

Probab=96.92  E-value=0.0013  Score=41.52  Aligned_cols=62  Identities=29%  Similarity=0.416  Sum_probs=40.2

Q ss_pred             CEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH-HCCCHHHHHHHHHCCHHHHHHH
Q ss_conf             079973788557789999998618985312576443346766666641-0163788875761698999999
Q gi|254780552|r   56 HVLFVGPPGLGKTTLAQVVARELGVNFRSTSGPVIAKAGDLAALLTNL-EDRDVLFIDEIHRLSIIVEEIL  125 (334)
Q Consensus        56 h~Lf~GPpG~GKTtlA~iiA~~l~~~~~~~s~~~~~~~~dl~~~~~~~-~~~~vlfiDEihrl~~~~q~~L  125 (334)
T Consensus         4 ~VvvtGiPGvGKTTv~~~~~~~l~~~~~~vn~------G~~M--~e~A~~~glv~~RDemRkL~~~~q~~l   66 (189)
T PRK04040          4 VVVVTGVPGVGKTTVLNKALEKLKEDYKIVNF------GDVM--LEVAKEEGLVEHRDEMRKLPLEEQKEL   66 (189)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHCCCCEEEEH------HHHH--HHHHHHCCCCCCHHHHCCCCHHHHHHH
T ss_conf             89997589887899999999972358759867------7999--999998177347788747999999999