HHsearch alignment for GI: 254780552 and conserved domain: PRK05342

>PRK05342 clpX ATP-dependent protease ATP-binding subunit ClpX; Provisional.
Probab=99.82  E-value=9.5e-20  Score=140.29  Aligned_cols=204  Identities=25%  Similarity=0.368  Sum_probs=138.1

Q ss_pred             CHHHH-CCHHHHHHHHHHHHHHHHHC--------CC---CCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCH
Q ss_conf             87782-39799999999999986614--------67---76707997378855778999999861898531257644334
Q gi|254780552|r   26 TLEEF-TGQVEACSNLKVFIEAAKAR--------AE---ALDHVLFVGPPGLGKTTLAQVVARELGVNFRSTSGPVIAKA   93 (334)
Q Consensus        26 ~l~dv-iGQ~~~~~~l~~~i~a~~~~--------~~---~~~h~Lf~GPpG~GKTtlA~iiA~~l~~~~~~~s~~~~~~~   93 (334)
T Consensus        69 ~LD~yVIGQ~~AKk~lsVAvyNHykRi~~~~~~~~~vei~KsNILliGPTG~GKTlla~tLAk~l~vPF~iaDAT~lTEa  148 (411)
T PRK05342         69 HLDQYVIGQERAKKVLSVAVYNHYKRLRQNGSKSDDVELQKSNILLIGPTGSGKTLLAQTLARILNVPFAIADATTLTEA  148 (411)
T ss_pred             HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECEECCC
T ss_conf             86214028488889999999999999860213356652134538998999977889999999986999899861200126


Q ss_pred             H----HHHHHH----HHH------HCCCHHHHHHHHHCCH--------------HHHHHHHHHHHCCCCCCCC---CCCC
Q ss_conf             6----766666----641------0163788875761698--------------9999999986347510025---6787
Q gi|254780552|r   94 G----DLAALL----TNL------EDRDVLFIDEIHRLSI--------------IVEEILYPAMEDFQLDLMV---GEGP  142 (334)
Q Consensus        94 ~----dl~~~~----~~~------~~~~vlfiDEihrl~~--------------~~q~~Ll~~mE~~~i~i~~---~~~~  142 (334)
T Consensus       149 GYVGeDVE~ii~~Llq~Ad~dve~Ae~GIV~IDEIDKIarks~~~s~trDVSgEGVQqaLLkiiEGt~v~vp~~ggrkhp  228 (411)
T PRK05342        149 GYVGEDVENILLKLLQAADYDVEKAQRGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHP  228 (411)
T ss_pred             CCCCCCHHHHHHHHHHHCCCCHHHHHCCEEEEEEHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCC
T ss_conf             74560799999999998288899883682888502345424788888777651248999999875871411888777787


Q ss_pred             CCCEEECCCCCCEEEECCC--------------------------------------CCCC-----CCHHHHHCCCCEEE
Q ss_conf             6520004667400552045--------------------------------------5433-----55454420120673
Q gi|254780552|r  143 SARSVKINLSRFTLIAATT--------------------------------------RVGL-----LTNPLQDRFGIPIR  179 (334)
Q Consensus       143 ~a~~~~~~~~~f~lI~ATt--------------------------------------~~~~-----l~~~l~sR~~~~~~  179 (334)
T Consensus       229 ~~~~~~idT~nILFI~gGAF~GL~~II~~R~~~~~iGF~~~~~~~~~~~~~~~l~~v~p~DLi~fGlIPEfiGRlPViv~  308 (411)
T PRK05342        229 QQEFIQVDTTNILFICGGAFDGLEKIIKQRLGKSGIGFGAEVKSKDEKDLGELLAQVEPEDLVKFGLIPEFIGRLPVVAT  308 (411)
T ss_pred             CCCEEEEECCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCCCHHHHCCCCEEEE
T ss_conf             76516761471799911553358999986357887677887664110005678762798788873883776146640546


Q ss_pred             CCCCCHHHHHHHHHH--------H---HHHC--CCHHHHHHHHHHHCCC---CCCHHHHHHHHHHH
Q ss_conf             264547999998777--------6---5412--1011111112332022---10156788777543
Q gi|254780552|r  180 LNFYEIEDLKTIVQR--------G---AKLT--GLAVTDEAACEIAMRS---RGTPRIAGRLLRRV  229 (334)
Q Consensus       180 ~~~~~~~el~~il~~--------~---~~~~--~i~~~~~al~~ia~~s---~Gd~R~AlnlLe~v  229 (334)
T Consensus       309 L~~L~~~~L~~ILtePkNaLikQY~~LF~~dgV~L~Ft~~AL~~IA~~A~~~~tGARgLRsIlE~i  374 (411)
T PRK05342        309 LEELDEEALVRILTEPKNALVKQYQKLFEMDGVELEFTDDALEAIAKKAIERKTGARGLRSILEEV  374 (411)
T ss_pred             CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf             244799999999658741599999999975496799868999999999998475745779999999