HHsearch alignment for GI: 254780552 and conserved domain: PRK05896

>PRK05896 DNA polymerase III subunits gamma and tau; Validated.
Probab=100.00  E-value=1.5e-44  Score=291.93  Aligned_cols=212  Identities=23%  Similarity=0.282  Sum_probs=173.7

Q ss_pred             HHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC-EEEECCCCCCHHHHHHHHHHHCCCCC-------------
Q ss_conf             5787507898778239799999999999986614677670-79973788557789999998618985-------------
Q gi|254780552|r   17 ADISLLRPRTLEEFTGQVEACSNLKVFIEAAKARAEALDH-VLFVGPPGLGKTTLAQVVARELGVNF-------------   82 (334)
Q Consensus        17 ~~~~~lRP~~l~dviGQ~~~~~~l~~~i~a~~~~~~~~~h-~Lf~GPpG~GKTtlA~iiA~~l~~~~-------------   82 (334)
T Consensus         5 alyrKYRPk~F~eIIGQe~iv~~L~nAI~~~R-----iaHAYLFsGPrGvGKTTlArifAkaLnC~~~~~~dpCg~C~sC   79 (613)
T PRK05896          5 TFYRKYRPHNFKQIIGQELIKKILVNAILNNK-----LTHAYIFSGPRGIGKTSIAKIFAKAINCLNPKDGDCCNSCSVC   79 (613)
T ss_pred             CHHHHCCCCCHHHHCCCHHHHHHHHHHHHCCC-----CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
T ss_conf             12450179976552382999999999998499-----7622775589984889999999999669999999988888789


Q ss_pred             -----------CCCCCCCCCCHHHHHHHHHHH------HCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             -----------312576443346766666641------016378887576169899999999863475100256787652
Q gi|254780552|r   83 -----------RSTSGPVIAKAGDLAALLTNL------EDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSAR  145 (334)
Q Consensus        83 -----------~~~s~~~~~~~~dl~~~~~~~------~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~  145 (334)
T Consensus        80 ~~I~~g~h~DviEIdaasn~gIDeIReLie~~~~~P~~gkyKV~IIDEah~Ln~~AaNALLKtLEE----------P---  146 (613)
T PRK05896         80 ESINTNQSVDIVELDAASNNGVDEIRNIIDNINYLPTTFKYKVYIIDEAHMLSTSAWNALLKTLEE----------P---  146 (613)
T ss_pred             HHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCHHHCCHHHHHHHHHHCCC----------C---
T ss_conf             998569999868840655578899999999708587579945999816221799999999985348----------9---


Q ss_pred             EEECCCCCCEEEECCCCCCCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf             00046674005520455433554544201206732645479999987776541210111111123320221015678877
Q gi|254780552|r  146 SVKINLSRFTLIAATTRVGLLTNPLQDRFGIPIRLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMRSRGTPRIAGRL  225 (334)
Q Consensus       146 ~~~~~~~~f~lI~ATt~~~~l~~~l~sR~~~~~~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~~s~Gd~R~Alnl  225 (334)
T Consensus       147 -----P~~viFIL~Ttep~KLLpTIlSRCQ-rf~Fkri~~~~I~~~L~~I~~kE~i~ie~~AL~~Ia~~adGs~RDAlsl  220 (613)
T PRK05896        147 -----PKHVVFIFATTEFQKIPLTIISRCQ-RYNFKKLNNSELQELLKSIAKKEKIKIEDNAIDKIADLADGSLRDGLSI  220 (613)
T ss_pred             -----CCCCEEEEEECCHHHCCHHHHHCCC-CEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHH
T ss_conf             -----8783799982881549376640355-0017889989999999999997399878999999999768848789889


Q ss_pred             HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
Q ss_conf             7543334554158864277878765421000
Q gi|254780552|r  226 LRRVRDFAEVAHAKTITREIADAALLRLAID  256 (334)
Q Consensus       226 Le~v~d~a~~~~~~~i~~~~~~~~l~~~~id  256 (334)
T Consensus       221 LdQ~~~~----~~~~it~~~v~~~~g~~~~~  247 (613)
T PRK05896        221 LDQLSTF----KNKKIDIEDINKTFGLVDNN  247 (613)
T ss_pred             HHHHHHH----CCCCCCHHHHHHHHCCCCHH
T ss_conf             9999983----56886299999996777689