HHsearch alignment for GI: 254780552 and conserved domain: PRK06305
>PRK06305 DNA polymerase III subunits gamma and tau; Validated.
Probab=100.00 E-value=0 Score=304.71 Aligned_cols=210 Identities=24% Similarity=0.286 Sum_probs=174.4
Q ss_pred HHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC-EEEECCCCCCHHHHHHHHHHHCCCCCC------------
Q ss_conf 5787507898778239799999999999986614677670-799737885577899999986189853------------
Q gi|254780552|r 17 ADISLLRPRTLEEFTGQVEACSNLKVFIEAAKARAEALDH-VLFVGPPGLGKTTLAQVVARELGVNFR------------ 83 (334)
Q Consensus 17 ~~~~~lRP~~l~dviGQ~~~~~~l~~~i~a~~~~~~~~~h-~Lf~GPpG~GKTtlA~iiA~~l~~~~~------------ 83 (334)
T Consensus 6 vlarKYRP~~F~dvVGQ~~vv~~L~nai~~~r-----i~HAyLF~GprGtGKTT~ArilAkaLnC~~~~~~~~pCg~C~~ 80 (462)
T PRK06305 6 VSSRKYRPQTFSEILGQDAVVTVLKNALRFNR-----AAHAYLFSGIRGTGKTTLARIFAKALNCQNPTEDQEPCNQCAI 80 (462)
T ss_pred HHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCC-----CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
T ss_conf 78876388987660490999999999998499-----7623430389985999999999999679999888898876688
Q ss_pred -------------CCCCCCCCCHHHHHHHHHHH------HCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf -------------12576443346766666641------01637888757616989999999986347510025678765
Q gi|254780552|r 84 -------------STSGPVIAKAGDLAALLTNL------EDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSA 144 (334)
Q Consensus 84 -------------~~s~~~~~~~~dl~~~~~~~------~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a 144 (334)
T Consensus 81 C~~I~~g~~~DViEiDaAs~~gVddIRel~e~v~~~P~~~~yKVyIIDEvhmLs~~AfNALLKtLEEP------------ 148 (462)
T PRK06305 81 CKEISSGTSLDVIEIDGASHRGIEDIRQINETVLFTPSKSQYKIYIIDEVHMLTKEAFNSLLKTLEEP------------ 148 (462)
T ss_pred HHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECHHHCCHHHHHHHHHHHHCC------------
T ss_conf 89986389998686435534466899999977100886775059998152117999999999986189------------
Q ss_pred CEEECCCCCCEEEECCCCCCCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf 20004667400552045543355454420120673264547999998777654121011111112332022101567887
Q gi|254780552|r 145 RSVKINLSRFTLIAATTRVGLLTNPLQDRFGIPIRLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMRSRGTPRIAGR 224 (334)
Q Consensus 145 ~~~~~~~~~f~lI~ATt~~~~l~~~l~sR~~~~~~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~~s~Gd~R~Aln 224 (334)
T Consensus 149 ------P~~v~FILaTTe~~KIp~TIlSRCQ-rf~F~~i~~~~I~~~L~~I~~~E~i~~e~~AL~lIA~~a~GsmRDAls 221 (462)
T PRK06305 149 ------PQHVKFFLATTEIHKIPGTILSRCQ-KMHLKRIPEETIIDKLALIAQQDGIETSREALLPIARAAQGSLRDAES 221 (462)
T ss_pred ------CCCEEEEEEECCHHHCCHHHHHHHH-EEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHH
T ss_conf ------8774999981881428547876540-233257999999999999999839985999999999985895878999
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf 775433345541588642778787654210
Q gi|254780552|r 225 LLRRVRDFAEVAHAKTITREIADAALLRLA 254 (334)
Q Consensus 225 lLe~v~d~a~~~~~~~i~~~~~~~~l~~~~ 254 (334)
T Consensus 222 lLDQ~i----~~~~~~it~~~V~~~lG~v~ 247 (462)
T PRK06305 222 LYDYVV----GLFPKSLSPDTVAKALGLLS 247 (462)
T ss_pred HHHHHH----HHCCCCCCHHHHHHHHCCCC
T ss_conf 999999----84799868999999868998