HHsearch alignment for GI: 254780552 and conserved domain: PRK06645

>PRK06645 DNA polymerase III subunits gamma and tau; Validated.
Probab=100.00  E-value=0  Score=309.16  Aligned_cols=212  Identities=23%  Similarity=0.283  Sum_probs=177.6

Q ss_pred             HHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC-EEEECCCCCCHHHHHHHHHHHCCCCC-------------
Q ss_conf             5787507898778239799999999999986614677670-79973788557789999998618985-------------
Q gi|254780552|r   17 ADISLLRPRTLEEFTGQVEACSNLKVFIEAAKARAEALDH-VLFVGPPGLGKTTLAQVVARELGVNF-------------   82 (334)
Q Consensus        17 ~~~~~lRP~~l~dviGQ~~~~~~l~~~i~a~~~~~~~~~h-~Lf~GPpG~GKTtlA~iiA~~l~~~~-------------   82 (334)
T Consensus        10 ~la~KyRP~~f~~liGQ~~~~~~l~n~i~~~~-----~~~aylf~G~rG~GKTt~Ari~ak~lnc~~~~~~~~~~~~c~~   84 (507)
T PRK06645         10 PFARKYRPSNFAELQGQEVLVKVLSYTILNDR-----LAGGYLLTGIRGVGKTTSARIIAKAVNCSALITENTTIKTCEK   84 (507)
T ss_pred             EEEECCCCCCHHHHCCCHHHHHHHHHHHHCCC-----CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf             64320079976562393999999999997399-----6634774587997889999999999679998888998888888


Q ss_pred             ---------------CCCCCCCCCCHHHHHHHHHHHH------CCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             ---------------3125764433467666666410------1637888757616989999999986347510025678
Q gi|254780552|r   83 ---------------RSTSGPVIAKAGDLAALLTNLE------DRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEG  141 (334)
Q Consensus        83 ---------------~~~s~~~~~~~~dl~~~~~~~~------~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~  141 (334)
T Consensus        85 c~~c~~i~~~~~~dv~EiDaas~~gv~~ir~l~~~~~~~p~~~~~kv~iidE~hmls~~a~nallktlEe----------  154 (507)
T PRK06645         85 CTNCISFNNHNHPDIIEIDAASKTSVDDIRRIIESAEYKPLQGKHKIFIIDEVHMLSKGAFNALLKTLEE----------  154 (507)
T ss_pred             CHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCHHHCCHHHHHHHHHHHHC----------
T ss_conf             7678998658999859963788888899999986355178767435899521422489999999997427----------


Q ss_pred             CCCCEEECCCCCCEEEECCCCCCCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHH
Q ss_conf             76520004667400552045543355454420120673264547999998777654121011111112332022101567
Q gi|254780552|r  142 PSARSVKINLSRFTLIAATTRVGLLTNPLQDRFGIPIRLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMRSRGTPRI  221 (334)
Q Consensus       142 ~~a~~~~~~~~~f~lI~ATt~~~~l~~~l~sR~~~~~~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~~s~Gd~R~  221 (334)
T Consensus       155 --------pp~~~~Fi~atte~~kip~ti~srcq-~f~~~~i~~~~i~~~l~~i~~~E~~~~~~~al~~ia~~a~Gs~RD  225 (507)
T PRK06645        155 --------PPPHIIFIFATTEVQKIPATIISRCQ-RYDLRRLSFEEIFKLLEYITKQENLKADIEALRIIAYKSEGSARD  225 (507)
T ss_pred             --------CCCCEEEEEECCCHHHCCHHHHHHCE-EEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHH
T ss_conf             --------86443899974853648378885432-787545997999999999999768777789999999855998678


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf             88777543334554158864277878765421
Q gi|254780552|r  222 AGRLLRRVRDFAEVAHAKTITREIADAALLRL  253 (334)
Q Consensus       222 AlnlLe~v~d~a~~~~~~~i~~~~~~~~l~~~  253 (334)
T Consensus       226 alslldqai~~~-~~~~~~I~~~~V~~MLGl~  256 (507)
T PRK06645        226 AVSILDQAASMS-AKSDNIISPQVINQMLGLV  256 (507)
T ss_pred             HHHHHHHHHHHH-CCCCCCCCHHHHHHHHCCC
T ss_conf             999999999975-4898702699999983899