HHsearch alignment for GI: 254780552 and conserved domain: PRK06995

Probab=97.93  E-value=7.1e-06  Score=55.43  Aligned_cols=64  Identities=34%  Similarity=0.582  Sum_probs=38.6

Q ss_pred             EEEECCCCCCHHH-HHHHHHHHC---CC---CCCCCC-----C-------------C--CCCCHHHHHHHHHHHHCCCHH
Q ss_conf             7997378855778-999999861---89---853125-----7-------------6--443346766666641016378
Q gi|254780552|r   57 VLFVGPPGLGKTT-LAQVVAREL---GV---NFRSTS-----G-------------P--VIAKAGDLAALLTNLEDRDVL  109 (334)
Q Consensus        57 ~Lf~GPpG~GKTt-lA~iiA~~l---~~---~~~~~s-----~-------------~--~~~~~~dl~~~~~~~~~~~vl  109 (334)
T Consensus       179 ~alVGPTGVGKTTTiAKLAAr~~l~~g~~kVaLIT~DTYRIgAvEQLktYa~IlgvPv~vv~~~~eL~~aL~~l~~~dlI  258 (404)
T PRK06995        179 FALVGPTGVGKTTTTAKLAARCVMRHGASKVALLTTDSYRIGGHEQLRIYGKILGVPVHAVKDAADLRLALAELRNKHIV  258 (404)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCEE
T ss_conf             89866888763758999999999983898379997687547899999999987595599959999999999970899999


Q ss_pred             HHHHHHHCCHH
Q ss_conf             88757616989
Q gi|254780552|r  110 FIDEIHRLSII  120 (334)
Q Consensus       110 fiDEihrl~~~  120 (334)
T Consensus       259 LIDTaGrs~rD  269 (404)
T PRK06995        259 LIDTVGMSQRD  269 (404)
T ss_pred             EEECCCCCCCC
T ss_conf             98099989768