HHsearch alignment for GI: 254780552 and conserved domain: PRK07261
>PRK07261 topology modulation protein; Provisional.
Probab=97.33 E-value=0.0002 Score=46.61 Aligned_cols=31 Identities=23% Similarity=0.386 Sum_probs=27.8
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 7997378855778999999861898531257
Q gi|254780552|r 57 VLFVGPPGLGKTTLAQVVARELGVNFRSTSG 87 (334)
Q Consensus 57 ~Lf~GPpG~GKTtlA~iiA~~l~~~~~~~s~ 87 (334)
T Consensus 3 I~IiG~sGsGKSTlAr~L~~~~~ip~~~LD~ 33 (171)
T PRK07261 3 IAIIGYSGSGKSTLARFLGQHYNCPVLHLDQ 33 (171)
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEEEECC
T ss_conf 9998899986899999999987979797022