HHsearch alignment for GI: 254780552 and conserved domain: PRK07276
>PRK07276 DNA polymerase III subunit delta'; Validated.
Probab=99.58 E-value=3.2e-14 Score=106.47 Aligned_cols=161 Identities=18% Similarity=0.278 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCE-EEECCCCCCHHHHHHHHHHHCCCCCCC-------------C-CC--CCC-----
Q ss_conf 7999999999999866146776707-997378855778999999861898531-------------2-57--644-----
Q gi|254780552|r 33 QVEACSNLKVFIEAAKARAEALDHV-LFVGPPGLGKTTLAQVVARELGVNFRS-------------T-SG--PVI----- 90 (334)
Q Consensus 33 Q~~~~~~l~~~i~a~~~~~~~~~h~-Lf~GPpG~GKTtlA~iiA~~l~~~~~~-------------~-s~--~~~----- 90 (334)
T Consensus 7 Qp~i~~~l~~~i~~~-----rl~HAyLf~G--~~Gk~~~A~~~A~~l~C~~~~~~~pCg~C~~C~~i~~~~hpDv~~i~~ 79 (290)
T PRK07276 7 QPKLFQRFQTILEQD-----RLNHAYLFSG--DFASFEMALFLAQSLFCEQKEDVLPCGHCRSCRLIEQGDFSDVTVIEP 79 (290)
T ss_pred HHHHHHHHHHHHHCC-----CCCEEEECCC--CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCEEECC
T ss_conf 899999999999849-----9650542169--868799999999998189999989898899999987699987137716
Q ss_pred ----CCHHHHHHHHHHH------HCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEECC
Q ss_conf ----3346766666641------016378887576169899999999863475100256787652000466740055204
Q gi|254780552|r 91 ----AKAGDLAALLTNL------EDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSARSVKINLSRFTLIAAT 160 (334)
Q Consensus 91 ----~~~~dl~~~~~~~------~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f~lI~AT 160 (334)
T Consensus 80 ~~~~I~vd~IR~l~~~~~~~~~~g~~KV~II~~Ad~mt~~AaNaLLK~LEE----------Pp--------~~t~~iLlt 141 (290)
T PRK07276 80 QGQVIKTDTIRELTANFSQSGYEGKRQVFIIKDADKMHVNAANSLLKVIEE----------PQ--------SEIYIFLLT 141 (290)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHCCHHHHHHHHHHHCC----------CC--------CCCEEEEEE
T ss_conf 777576889999999984456137827999776565299999999997038----------98--------883799887
Q ss_pred CCCCCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 5543355454420120673264547999998777654121011111112332022101567887775
Q gi|254780552|r 161 TRVGLLTNPLQDRFGIPIRLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMRSRGTPRIAGRLLR 227 (334)
Q Consensus 161 t~~~~l~~~l~sR~~~~~~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~~s~Gd~R~AlnlLe 227 (334)
T Consensus 142 ~~~~~lLpTI~SRCQ-~i~f-p~~~~~l~~~l~----~~g--i~~~~a~~la~~~~-~~~~a~~l~~ 199 (290)
T PRK07276 142 NDENKVLPTIKSRTQ-IFHF-PKNEAYLYQLLE----EKG--LLKTQAKLLAKLAQ-STSEAEKLAQ 199 (290)
T ss_pred CCHHHCCHHHHHCCC-CCCC-CCCHHHHHHHHH----HCC--CCHHHHHHHHHHHC-CHHHHHHHHH
T ss_conf 992549378873660-1028-996799999999----869--98679999999965-9999999872