HHsearch alignment for GI: 254780552 and conserved domain: PRK08058
>PRK08058 DNA polymerase III subunit delta'; Validated.
Probab=99.93 E-value=1.7e-25 Score=175.42 Aligned_cols=171 Identities=23% Similarity=0.249 Sum_probs=126.3
Q ss_pred CCHHHHCC-HHHHHHHHHHHHHHHHHCCCCCCCE-EEECCCCCCHHHHHHHHHHHCCCC-------CC------CCC---
Q ss_conf 98778239-7999999999999866146776707-997378855778999999861898-------53------125---
Q gi|254780552|r 25 RTLEEFTG-QVEACSNLKVFIEAAKARAEALDHV-LFVGPPGLGKTTLAQVVARELGVN-------FR------STS--- 86 (334)
Q Consensus 25 ~~l~dviG-Q~~~~~~l~~~i~a~~~~~~~~~h~-Lf~GPpG~GKTtlA~iiA~~l~~~-------~~------~~s--- 86 (334)
T Consensus 2 ~~~~~~~~~Q~~i~~~L~~~i~~~-----rl~HA~Lf~Gp~G~GK~~~A~~~A~~LlC~~~~~~~~Cg~C~~C~~~~~~~ 76 (329)
T PRK08058 2 MTWEQLTALQPIVVKMLQNSIAKN-----RLAHAYLFEGAKGTGKKATALWLAKSLFCLERNGVEPCGTCTNCKRIESGN 76 (329)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-----CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCC
T ss_conf 977888831899999999999859-----966156557899988999999999997399999999887888999987699
Q ss_pred CC----------CCCCHHHHHHHHHHH------HCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECC
Q ss_conf 76----------443346766666641------01637888757616989999999986347510025678765200046
Q gi|254780552|r 87 GP----------VIAKAGDLAALLTNL------EDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSARSVKIN 150 (334)
Q Consensus 87 ~~----------~~~~~~dl~~~~~~~------~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~ 150 (334)
T Consensus 77 HPD~~~i~p~~~~i-~idqiR~L~~~~~~~p~~g~~KV~II~~Ae~m~~~AaNALLKtLEE----------Pp------- 138 (329)
T PRK08058 77 HPDVHLVAPDGQSI-KKDQIRYLKEEFSKSGVESNKKVYIIEHADKMTASAANSLLKFLEE----------PS------- 138 (329)
T ss_pred CCCEEEECCCCCCC-CHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHCHHHHHHHHHHHHC----------CC-------
T ss_conf 99767745661407-7999999999964387578867999734776299999999998646----------89-------
Q ss_pred CCCCEEEECCCCCCCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 67400552045543355454420120673264547999998777654121011111112332022101567887775
Q gi|254780552|r 151 LSRFTLIAATTRVGLLTNPLQDRFGIPIRLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMRSRGTPRIAGRLLR 227 (334)
Q Consensus 151 ~~~f~lI~ATt~~~~l~~~l~sR~~~~~~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~~s~Gd~R~AlnlLe 227 (334)
T Consensus 139 -~~t~fIL~t~~~~~lLpTI~SRCq-~i~f~~~~~~~i~~~L~~----~~i--~~~~a~l~a~~-~gs~~~A~~l~~ 206 (329)
T PRK08058 139 -GDTTAILLTENKHQILPTILSRCQ-VVEFRPLPPESLIQRLQE----EGI--SESLATLLAQL-TNSVEEALALSE 206 (329)
T ss_pred -CCCEEEEEECCHHHHHHHHHHCCE-EEECCCCCHHHHHHHHHH----CCC--CHHHHHHHHHH-CCCHHHHHHHHC
T ss_conf -786799872996664368863142-565889999999999998----799--98999999987-899999998842