HHsearch alignment for GI: 254780552 and conserved domain: PRK10436
>PRK10436 hypothetical protein; Provisional.
Probab=96.10 E-value=0.022 Score=34.12 Aligned_cols=105 Identities=26% Similarity=0.316 Sum_probs=57.1
Q ss_pred CCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCC---CCCCCC-----------
Q ss_conf 898778239799999999999986614677670799737885577899999986189853---125764-----------
Q gi|254780552|r 24 PRTLEEFTGQVEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVARELGVNFR---STSGPV----------- 89 (334)
Q Consensus 24 P~~l~dviGQ~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l~~~~~---~~s~~~----------- 89 (334)
T Consensus 191 ~~~L~~LG~~~~~~~~~~~~~~~--p~----GliLvtGPTGSGKTTTLya~L~~l~~~~~~I~TiEDPVE~~l~gi~Q~~ 264 (461)
T PRK10436 191 TLDLETLGMTPAQLAQFRQALQQ--PQ----GLVLVTGPTGSGKTVTLYSALQTLNTAQINICSVEDPVEIPLAGINQTQ 264 (461)
T ss_pred CCCHHHHCCCHHHHHHHHHHHHC--CC----CEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCE
T ss_conf 68887848899999999999838--99----7799978999956999999997434677169996077435546754523
Q ss_pred -CCCHH-HHHHHHHHH--HCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCC
Q ss_conf -43346-766666641--016378887576169899999999863475100
Q gi|254780552|r 90 -IAKAG-DLAALLTNL--EDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDL 136 (334)
Q Consensus 90 -~~~~~-dl~~~~~~~--~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i 136 (334)
T Consensus 265 vn~~~g~tfa~~lrs~LRqDPDVImvGEIR-D~eTA~~Ai~AAl-TGHLVl 313 (461)
T PRK10436 265 IHPRAGLTFQRVLRALLRQDPDVIMVGEIR-DGETAEIAIKAAQ-TGHLVL 313 (461)
T ss_pred ECCCCCHHHHHHHHHHHCCCCCEEEECCCC-CHHHHHHHHHHHH-HCCEEE
T ss_conf 132213139999999874699999865778-8999999999997-198488