HHsearch alignment for GI: 254780552 and conserved domain: PRK13833

>PRK13833 conjugal transfer protein TrbB; Provisional.
Probab=97.16  E-value=0.00048  Score=44.26  Aligned_cols=53  Identities=26%  Similarity=0.328  Sum_probs=35.1

Q ss_pred             CCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHC
Q ss_conf             78987782397999999999999866146776707997378855778999999861
Q gi|254780552|r   23 RPRTLEEFTGQVEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVAREL   78 (334)
Q Consensus        23 RP~~l~dviGQ~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l   78 (334)
T Consensus       116 ~~~tl~dlv~~g~~t~~~~~~L~~aV~~r---~nilVsGgTGSGKTTllnaL~~~i  168 (323)
T PRK13833        116 RLIPLDDYVRSKVMTEAQASTIRSAISSR---LNIVISGGTGSGKTTLANAVIAEI  168 (323)
T ss_pred             CCCCHHHHHHCCCCCHHHHHHHHHHHHCC---CCEEEECCCCCCHHHHHHHHHHHH
T ss_conf             99999999876999999999999999818---968999177775689999999864