HHsearch alignment for GI: 254780552 and conserved domain: PRK13900
>PRK13900 type IV secretion system ATPase VirB11; Provisional.
Probab=97.09 E-value=0.00091 Score=42.55 Aligned_cols=25 Identities=28% Similarity=0.508 Sum_probs=21.5
Q ss_pred CEEEECCCCCCHHHHHHHHHHHCCC
Q ss_conf 0799737885577899999986189
Q gi|254780552|r 56 HVLFVGPPGLGKTTLAQVVARELGV 80 (334)
Q Consensus 56 h~Lf~GPpG~GKTtlA~iiA~~l~~ 80 (334)
T Consensus 162 NilI~G~TgSGKTTll~aL~~~ip~ 186 (332)
T PRK13900 162 NIIISGGTSTGKTTFTNAALREIPA 186 (332)
T ss_pred CEEEECCCCCCHHHHHHHHHHCCCC
T ss_conf 1999888898899999999835895