HHsearch alignment for GI: 254780552 and conserved domain: PRK13948
>PRK13948 shikimate kinase; Provisional.
Probab=97.85 E-value=2.3e-05 Score=52.27 Aligned_cols=35 Identities=26% Similarity=0.394 Sum_probs=30.3
Q ss_pred CCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 76707997378855778999999861898531257
Q gi|254780552|r 53 ALDHVLFVGPPGLGKTTLAQVVARELGVNFRSTSG 87 (334)
Q Consensus 53 ~~~h~Lf~GPpG~GKTtlA~iiA~~l~~~~~~~s~ 87 (334)
T Consensus 9 ~~~~IvLIG~mGsGKStiGk~LA~~l~~~fiD~D~ 43 (182)
T PRK13948 9 PATFVALAGFMGTGKSRIGWELSRALALHFVDTDK 43 (182)
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHCCCEEECHH
T ss_conf 99818988999998899999999996959888849