HHsearch alignment for GI: 254780552 and conserved domain: PTZ00112
>PTZ00112 origin recognition complex 1 protein; Provisional.
Probab=99.62 E-value=2.6e-15 Score=113.16 Aligned_cols=204 Identities=17% Similarity=0.231 Sum_probs=135.3
Q ss_pred HCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHC----------CCCCCCCCCCCCCCHHHH---
Q ss_conf 2397999999999999866146776707997378855778999999861----------898531257644334676---
Q gi|254780552|r 30 FTGQVEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVAREL----------GVNFRSTSGPVIAKAGDL--- 96 (334)
Q Consensus 30 viGQ~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l----------~~~~~~~s~~~~~~~~dl--- 96 (334)
T Consensus 269 lpcRe~E~~~I~~Fie~~i~q~GtG~cLYISGVPGTGKTATV~eVIr~L~~~~~~~~lp~F~fVEINGMkLt~P~qaY~~ 348 (650)
T PTZ00112 269 ILGREKEAKEIRTFLETGIKQGGTGQILYISGVPGTGKTATVYMVIKELQNKKLKGQLPWFNLFEINGVNLVHPNAAYRV 348 (650)
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEECCCHHHHHHH
T ss_conf 77707899999999986411688665699978999980036999999999999708999815999736377987889999
Q ss_pred --------------------HHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEE
Q ss_conf --------------------666664101637888757616989999999986347510025678765200046674005
Q gi|254780552|r 97 --------------------AALLTNLEDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSARSVKINLSRFTL 156 (334)
Q Consensus 97 --------------------~~~~~~~~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f~l 156 (334)
T Consensus 349 L~e~Ltg~k~~~~~~A~~lL~k~F~~~r~p~VlLvDELD~LvTkkQ~VlYNLFdWPT-------~~~S--------kLIV 413 (650)
T PTZ00112 349 FYKKLFNKKPPNALNSYKELDKLFNNNRTPSILIVDEADYIVTKTQKVLFTLFDWPT-------KKNS--------KLIL 413 (650)
T ss_pred HHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHCCCCEEEECCCCCC-------CCCC--------EEEE
T ss_conf 999984898886789999999982689971899971577776367745777366889-------8887--------0799
Q ss_pred EE-C-CCC-CCCCCHHHHHCCCC-EEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC---CCCCHHHHHHHHHHH
Q ss_conf 52-0-455-43355454420120-67326454799999877765412101111111233202---210156788777543
Q gi|254780552|r 157 IA-A-TTR-VGLLTNPLQDRFGI-PIRLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMR---SRGTPRIAGRLLRRV 229 (334)
Q Consensus 157 I~-A-Tt~-~~~l~~~l~sR~~~-~~~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~~---s~Gd~R~AlnlLe~v 229 (334)
T Consensus 414 IaIANTMDLPERL~~RVsSRLGltRltF~PYt~~QL~eII~sRL~~~~-~f~~dAIQl~ARKVAavSGDARRALdICRRA 492 (650)
T PTZ00112 414 IIISNTMDLPYKMKPSCRSRLAFGRLVFSPYKYQQIEKVIKERLENCE-IIDHTALQLCARRVTNYSGDMRKALQICKLA 492 (650)
T ss_pred EEEEECCCCCHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHCCCC-CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 998506786065666655522885004399899999999999862677-7887899999888875031489999999999
Q ss_pred HHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 33455415886427787876542
Q gi|254780552|r 230 RDFAEVAHAKTITREIADAALLR 252 (334)
Q Consensus 230 ~d~a~~~~~~~i~~~~~~~~l~~ 252 (334)
T Consensus 493 vE---~~~~~ki~~~~i~~a~n~ 512 (650)
T PTZ00112 493 FE---NKNGGKITPRDMTRASNM 512 (650)
T ss_pred HH---HCCCCEEEHHHHHHHHHH
T ss_conf 97---356873424899999888