HHsearch alignment for GI: 254780552 and conserved domain: TIGR00750
>TIGR00750 lao LAO/AO transport system ATPase; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components. In Escherichia coli K-12, the arginine-ornithine transport system requires an arginine-ornithine-binding protein and the lysine-arginine-ornithine (LAO) transport system includes a LAO-binding protein. Both periplasmic proteins can be phosphorylated by a single kinase, ArgK resulting in reduced levels of transport activity of the periplasmic transport systems that include each of the binding proteins. The ArgK protein acts as an ATPase enzyme and as a kinase..
Probab=95.35 E-value=0.013 Score=35.41 Aligned_cols=23 Identities=48% Similarity=0.794 Sum_probs=20.8
Q ss_pred CEE-EECCCCCCHHHHHHHHHHHC
Q ss_conf 079-97378855778999999861
Q gi|254780552|r 56 HVL-FVGPPGLGKTTLAQVVAREL 78 (334)
Q Consensus 56 h~L-f~GPpG~GKTtlA~iiA~~l 78 (334)
T Consensus 39 ~~vG~TG~PGaGKSTl~~~l~~~l 62 (333)
T TIGR00750 39 HVVGITGVPGAGKSTLVEKLIMEL 62 (333)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 787664688885777999998999