HHsearch alignment for GI: 254780552 and conserved domain: TIGR01447

>TIGR01447 recD exodeoxyribonuclease V, alpha subunit; InterPro: IPR006344 This family describes the exodeoxyribonuclease V alpha subunit, RecD. RecD is part of a RecBCD complex. C-terminal part of the protein matches a domain found in viral RNA helicase, superfamily 1, IPR000606 from INTERPRO. ; GO: 0008854 exodeoxyribonuclease V activity, 0009338 exodeoxyribonuclease V complex.
Probab=97.14  E-value=0.00041  Score=44.64  Aligned_cols=50  Identities=18%  Similarity=0.255  Sum_probs=29.1

Q ss_pred             CHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCCC
Q ss_conf             3788875761698999999998634751002567876520004667400552045543355
Q gi|254780552|r  107 DVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSARSVKINLSRFTLIAATTRVGLLT  167 (334)
Q Consensus       107 ~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f~lI~ATt~~~~l~  167 (334)
T Consensus       351 DVLvvDEaSMVdl~lm~kL~~A~~~~~k--------~~KLy~---~~LIllGD~nQL~sve  400 (753)
T TIGR01447       351 DVLVVDEASMVDLPLMAKLLKALPPNTK--------DKKLYA---DRLILLGDKNQLPSVE  400 (753)
T ss_pred             CEEEECCCHHCCHHHHHHHHHHCCCCCC--------CCCHHH---CCCCEECCCCCCCCCC
T ss_conf             5278706002267999999972263001--------320101---0200122678888754