HHsearch alignment for GI: 254780552 and conserved domain: TIGR02237
>TIGR02237 recomb_radB DNA repair and recombination protein RadB; InterPro: IPR011939 This family consists exclusively of archaeal RadB protein, a homolog of bacterial RecA, eukaryotic RAD51 (IPR011941 from INTERPRO) and DMC1 (IPR011940 from INTERPRO), and archaeal RadA (IPR011938 from INTERPRO) ,, .; GO: 0003684 damaged DNA binding, 0005524 ATP binding, 0008094 DNA-dependent ATPase activity, 0006281 DNA repair, 0006310 DNA recombination.
Probab=97.34 E-value=0.00013 Score=47.72 Aligned_cols=19 Identities=42% Similarity=0.823 Sum_probs=17.6
Q ss_pred EECCCCCCHHHHHHHHHHH
Q ss_conf 9737885577899999986
Q gi|254780552|r 59 FVGPPGLGKTTLAQVVARE 77 (334)
Q Consensus 59 f~GPpG~GKTtlA~iiA~~ 77 (334)
T Consensus 17 iYGp~G~GKTn~c~~~a~~ 35 (223)
T TIGR02237 17 IYGPPGSGKTNICLILAVN 35 (223)
T ss_pred EECCCCCCHHHHHHHHHHH
T ss_conf 8758998678999999999