HHsearch alignment for GI: 254780552 and conserved domain: TIGR02928
>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..
Probab=99.85 E-value=1e-19 Score=140.13 Aligned_cols=267 Identities=21% Similarity=0.255 Sum_probs=172.4
Q ss_pred HHCCHHHHHHHHHHHHHHHHHC-CCCCCCEEEECCCCCCHHHHHHHHHHHC---------C-CCCCCCCCCCCCCHH---
Q ss_conf 8239799999999999986614-6776707997378855778999999861---------8-985312576443346---
Q gi|254780552|r 29 EFTGQVEACSNLKVFIEAAKAR-AEALDHVLFVGPPGLGKTTLAQVVAREL---------G-VNFRSTSGPVIAKAG--- 94 (334)
Q Consensus 29 dviGQ~~~~~~l~~~i~a~~~~-~~~~~h~Lf~GPpG~GKTtlA~iiA~~l---------~-~~~~~~s~~~~~~~~--- 94 (334)
T Consensus 18 ~i~hRdeqI~~l~~~L~~~-l~PG~~P~Ni~iYGkTGtGKT~vt~~v~~~l~~~~~~~d~~D~~~~~~NC~~~~T~y~~~ 96 (383)
T TIGR02928 18 RIVHRDEQIEELAKALRPI-LRPGSRPSNIFIYGKTGTGKTAVTKYVMKELEEAAEDRDVRDVSTVYINCQILDTSYQVL 96 (383)
T ss_pred CCCCCHHHHHHHHHHHHHH-HCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHH
T ss_conf 4668678999999998875-067489872588788898788999999999999862269971589997785468469999
Q ss_pred -H---------------------------HHHHHH-HHHCCCHHHHHHHHHC-CHHHHH-----HHHHHH---HCCCCCC
Q ss_conf -7---------------------------666666-4101637888757616-989999-----999986---3475100
Q gi|254780552|r 95 -D---------------------------LAALLT-NLEDRDVLFIDEIHRL-SIIVEE-----ILYPAM---EDFQLDL 136 (334)
Q Consensus 95 -d---------------------------l~~~~~-~~~~~~vlfiDEihrl-~~~~q~-----~Ll~~m---E~~~i~i 136 (334)
T Consensus 97 ~~L~~~ln~~~~~~~vP~tG~s~~~~~~~l~~~l~~~~~~~~~ivLDEiD~Lv~~~~d~PAyS~~LY~L~Ra~~~~~~-- 174 (383)
T TIGR02928 97 VELANQLNRRGSGEEVPTTGLSTSEVFRELYKELNRERGDSLIIVLDEIDKLVRKDDDDPAYSKLLYQLSRARENGDL-- 174 (383)
T ss_pred HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCC--
T ss_conf 999998515778888988778789999999999832018879998623102215888880787885343310003577--
Q ss_pred CCCCCCCCCEEECCCCCCEEEECCCCCC---CCCHHHHHCCC-CEEECCCCCHHHHHHHHHHHH-HH-C-CCHHHHHHHH
Q ss_conf 2567876520004667400552045543---35545442012-067326454799999877765-41-2-1011111112
Q gi|254780552|r 137 MVGEGPSARSVKINLSRFTLIAATTRVG---LLTNPLQDRFG-IPIRLNFYEIEDLKTIVQRGA-KL-T-GLAVTDEAAC 209 (334)
Q Consensus 137 ~~~~~~~a~~~~~~~~~f~lI~ATt~~~---~l~~~l~sR~~-~~~~~~~~~~~el~~il~~~~-~~-~-~i~~~~~al~ 209 (334)
T Consensus 175 -------------~~~~vgvIgISND~~f~~~Ld~RVkSsL~~eei~FpPYdA~eL~~IL~~R~v~~AF~dGvl~d~VI~ 241 (383)
T TIGR02928 175 -------------ENAKVGVIGISNDLKFRENLDPRVKSSLCEEEIVFPPYDAEELRDILENRAVEKAFYDGVLDDGVIP 241 (383)
T ss_pred -------------CCCCEEEEEEECCCHHHHHCCCCEECCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHH
T ss_conf -------------8853489998657143644575301324874004079886999999972031203368854622799
Q ss_pred H---HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH-HCCC-----CHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 3---3202210156788777543334554158864277878765421-0000-----00467768899999975186620
Q gi|254780552|r 210 E---IAMRSRGTPRIAGRLLRRVRDFAEVAHAKTITREIADAALLRL-AIDK-----MGFDQLDLRYLTMIARNFGGGPV 280 (334)
Q Consensus 210 ~---ia~~s~Gd~R~AlnlLe~v~d~a~~~~~~~i~~~~~~~~l~~~-~id~-----~Gl~~~d~~~L~~l~~~~~~g~~ 280 (334)
T Consensus 242 lcAA~aAq~hGDAR~AiDLLR~AGe~A~~~g~~~Vt~~HV~~A~e~~PE~~r~~e~~~~Lp~h~k~~L~A~~~------- 314 (383)
T TIGR02928 242 LCAALAAQEHGDARKAIDLLRVAGEIAEREGAERVTEDHVEEAQEKIPEVDRVLELIRGLPTHSKLVLLAIAN------- 314 (383)
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHH-------
T ss_conf 9999862067878999999998768753157631008889999983222889999860798679999999999-------
Q ss_pred HHHHHHHHH-CCCCCCCHHHHHHHHHHHHHCCCCHHH-HHHHHH
Q ss_conf 699999982-874567467899999983430587189-999998
Q gi|254780552|r 281 GIETISAGL-SEPRDAIEDLIEPYMIQQGFIQRTPRG-RLLMPI 322 (334)
Q Consensus 281 ~~~~isA~~-ks~RgS~~daa~~yL~r~g~~~~~prg-RrL~~~ 322 (334)
T Consensus 315 ----l~~~~~~~~~~~t~~vY~~Y~~~c~~~~~dpl~~rR~~~~ 354 (383)
T TIGR02928 315 ----LAAESPEEDPFRTGEVYEVYKELCEDIGVDPLTQRRISDL 354 (383)
T ss_pred ----HHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf ----9851678873661277899999987626776614679998