HHsearch alignment for GI: 254780552 and conserved domain: TIGR03499
>TIGR03499 FlhF flagellar biosynthetic protein FlhF.
Probab=98.11 E-value=2.8e-06 Score=57.87 Aligned_cols=20 Identities=55% Similarity=0.939 Sum_probs=13.4
Q ss_pred EEEECCCCCCHHHH-HHHHHH
Q ss_conf 79973788557789-999998
Q gi|254780552|r 57 VLFVGPPGLGKTTL-AQVVAR 76 (334)
Q Consensus 57 ~Lf~GPpG~GKTtl-A~iiA~ 76 (334)
T Consensus 197 i~lvGPTGVGKTTTiAKLAa~ 217 (282)
T TIGR03499 197 IALVGPTGVGKTTTLAKLAAR 217 (282)
T ss_pred EEEECCCCCCHHHHHHHHHHH
T ss_conf 999778887578899999999