HHsearch alignment for GI: 254780552 and conserved domain: cd01131
>cd01131 PilT Pilus retraction ATPase PilT. PilT is a nucleotide binding protein responsible for the retraction of type IV pili, likely by pili disassembly. This retraction provides the force required for travel of bacteria in low water environments by a mechanism known as twitching motility.
Probab=96.61 E-value=0.0048 Score=38.12 Aligned_cols=24 Identities=33% Similarity=0.512 Sum_probs=21.3
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCC
Q ss_conf 799737885577899999986189
Q gi|254780552|r 57 VLFVGPPGLGKTTLAQVVARELGV 80 (334)
Q Consensus 57 ~Lf~GPpG~GKTtlA~iiA~~l~~ 80 (334)
T Consensus 4 iLitG~TGSGKTTtl~all~~i~~ 27 (198)
T cd01131 4 VLVTGPTGSGKSTTLAAMIDYINK 27 (198)
T ss_pred EEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 999899999799999999985363