HHsearch alignment for GI: 254780552 and conserved domain: cd03231
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=95.56 E-value=0.01 Score=36.09 Aligned_cols=22 Identities=41% Similarity=0.585 Sum_probs=19.4
Q ss_pred EEEECCCCCCHHHHHHHHHHHC
Q ss_conf 7997378855778999999861
Q gi|254780552|r 57 VLFVGPPGLGKTTLAQVVAREL 78 (334)
Q Consensus 57 ~Lf~GPpG~GKTtlA~iiA~~l 78 (334)
T Consensus 29 ~~l~G~NGsGKSTLlk~i~Gl~ 50 (201)
T cd03231 29 LQVTGPNGSGKTTLLRILAGLS 50 (201)
T ss_pred EEEECCCCCCHHHHHHHHHCCC
T ss_conf 9999999999999999996677