HHsearch alignment for GI: 254780552 and conserved domain: cd03255
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=95.84 E-value=0.0064 Score=37.34 Aligned_cols=23 Identities=39% Similarity=0.587 Sum_probs=19.8
Q ss_pred CEEEECCCCCCHHHHHHHHHHHC
Q ss_conf 07997378855778999999861
Q gi|254780552|r 56 HVLFVGPPGLGKTTLAQVVAREL 78 (334)
Q Consensus 56 h~Lf~GPpG~GKTtlA~iiA~~l 78 (334)
T Consensus 32 ~~~iiG~sGsGKTTll~~i~Gl~ 54 (218)
T cd03255 32 FVAIVGPSGSGKSTLLNILGGLD 54 (218)
T ss_pred EEEEECCCCCHHHHHHHHHHCCC
T ss_conf 99999999986999999996699