HHsearch alignment for GI: 254780552 and conserved domain: pfam00437
>pfam00437 GSPII_E Type II/IV secretion system protein. This family contains both type II and type IV pathway secretion proteins from bacteria. VirB11 ATPase is a subunit of the Agrobacterium tumefaciens transfer DNA (T-DNA) transfer system, a type IV secretion pathway required for delivery of T-DNA and effector proteins to plant cells during infection.
Probab=97.43 E-value=0.00028 Score=45.69 Aligned_cols=54 Identities=24% Similarity=0.316 Sum_probs=37.7
Q ss_pred CCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCC
Q ss_conf 898778239799999999999986614677670799737885577899999986189
Q gi|254780552|r 24 PRTLEEFTGQVEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVARELGV 80 (334)
Q Consensus 24 P~~l~dviGQ~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l~~ 80 (334)
T Consensus 112 ~~tl~~L~~~g~~~~~~~~~L~~~v~~---~~~ilIsG~TGSGKTT~l~all~~i~~ 165 (283)
T pfam00437 112 SLTLDDLGMTGAFDADIAEFLRQAVQA---RGNILVSGGTGSGKTTLLYALLNEINT 165 (283)
T ss_pred CCCHHHHCCCCCCHHHHHHHHHHHHHC---CCEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf 899999738977859999999999981---975999889999889999999984087