HHsearch alignment for GI: 254780552 and conserved domain: pfam00493
>pfam00493 MCM MCM2/3/5 family.
Probab=99.74 E-value=4.9e-17 Score=123.68 Aligned_cols=146 Identities=25% Similarity=0.278 Sum_probs=91.1
Q ss_pred HHCCHHHHHHHHHHHHHHHHH---------CCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCH------
Q ss_conf 823979999999999998661---------46776707997378855778999999861898531257644334------
Q gi|254780552|r 29 EFTGQVEACSNLKVFIEAAKA---------RAEALDHVLFVGPPGLGKTTLAQVVARELGVNFRSTSGPVIAKA------ 93 (334)
Q Consensus 29 dviGQ~~~~~~l~~~i~a~~~---------~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l~~~~~~~s~~~~~~~------ 93 (334)
T Consensus 25 ~i~G~~~vK~ai~l~l~gg~~~~~~~~~~~Rg~--ihiLLvGdPG~gKSqlLk~~~~~~pr~-~~tsg~~ss~~GLTa~~ 101 (327)
T pfam00493 25 SIYGHEDVKKAILLQLFGGVKKNLPDGTRLRGD--INVLLVGDPGTAKSQLLKYVAKLAPRA-VYTSGKGSSAAGLTAAV 101 (327)
T ss_pred CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC--CEEEEECCCCCCHHHHHHHHHHHCCCC-EEECCCCCCCCCCEEEE
T ss_conf 124987999999999808987658888620365--118984699815609999999868870-88317766567761589
Q ss_pred -HHH--------HHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCC
Q ss_conf -676--------66666410163788875761698999999998634751002567876520004667400552045543
Q gi|254780552|r 94 -GDL--------AALLTNLEDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSARSVKINLSRFTLIAATTRVG 164 (334)
Q Consensus 94 -~dl--------~~~~~~~~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f~lI~ATt~~~ 164 (334)
T Consensus 102 ~~d~~~~~~~leaGalv-lAd~Gv~cIDEfdk~~~~d~saL~EAMEqqtVsI--aKaG--i~~tL-~ar~sVlAaaNP~~ 175 (327)
T pfam00493 102 VRDPDTGEWTLEAGALV-LADGGVCCIDEFDKMNEEDRVAIHEAMEQQTISI--AKAG--IVATL-NARCSVLAAANPIF 175 (327)
T ss_pred EEECCCCCEEEECCCEE-ECCCCEEEEECCCCCCHHHHHHHHHHHHHCEEEE--ECCC--EEEEE-CCCCEEEEEECCCC
T ss_conf 98068883698368477-5589827850055588767999999998681776--3385--38972-58717998527767
Q ss_pred -------------CCCHHHHHCCCCEEECCCC
Q ss_conf -------------3554544201206732645
Q gi|254780552|r 165 -------------LLTNPLQDRFGIPIRLNFY 183 (334)
Q Consensus 165 -------------~l~~~l~sR~~~~~~~~~~ 183 (334)
T Consensus 176 g~yd~~~~~~~ni~Lp~~lLsRFDLif~l~D~ 207 (327)
T pfam00493 176 GRYDPKKSVAENINLPPPLLSRFDLIFVLLDK 207 (327)
T ss_pred CCCCCCCCHHHHCCCCHHHHCCEEEEEEEECC
T ss_conf 73788889888558976774501079884068