HHsearch alignment for GI: 254780552 and conserved domain: pfam04851
>pfam04851 ResIII Type III restriction enzyme, res subunit.
Probab=97.46 E-value=0.00047 Score=44.30 Aligned_cols=61 Identities=26% Similarity=0.213 Sum_probs=35.5
Q ss_pred CEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHH
Q ss_conf 079973788557789999998618985312576443346766666641016378887576169899
Q gi|254780552|r 56 HVLFVGPPGLGKTTLAQVVARELGVNFRSTSGPVIAKAGDLAALLTNLEDRDVLFIDEIHRLSIIV 121 (334)
Q Consensus 56 h~Lf~GPpG~GKTtlA~iiA~~l~~~~~~~s~~~~~~~~dl~~~~~~~~~~~vlfiDEihrl~~~~ 121 (334)
T Consensus 20 ~~~i~~pTGsGKT~~~~~~i~~~~~~~~~~--lvlv---p~~~L~~Q~~~~~lii~DE~H~~~a~~ 80 (103)
T pfam04851 20 RGLIVMATGSGKTLTAAKLIARLLKGKKKV--LFLV---PRKDLLEQALEEFVIIIDEAHHSSAKT 80 (103)
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHHCCCCE--EEEE---CCHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 869995899987999999999998469929--9990---829999999996564601635235378