HHsearch alignment for GI: 254780552 and conserved domain: pfam04851

>pfam04851 ResIII Type III restriction enzyme, res subunit.
Probab=97.46  E-value=0.00047  Score=44.30  Aligned_cols=61  Identities=26%  Similarity=0.213  Sum_probs=35.5

Q ss_pred             CEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHH
Q ss_conf             079973788557789999998618985312576443346766666641016378887576169899
Q gi|254780552|r   56 HVLFVGPPGLGKTTLAQVVARELGVNFRSTSGPVIAKAGDLAALLTNLEDRDVLFIDEIHRLSIIV  121 (334)
Q Consensus        56 h~Lf~GPpG~GKTtlA~iiA~~l~~~~~~~s~~~~~~~~dl~~~~~~~~~~~vlfiDEihrl~~~~  121 (334)
T Consensus        20 ~~~i~~pTGsGKT~~~~~~i~~~~~~~~~~--lvlv---p~~~L~~Q~~~~~lii~DE~H~~~a~~   80 (103)
T pfam04851        20 RGLIVMATGSGKTLTAAKLIARLLKGKKKV--LFLV---PRKDLLEQALEEFVIIIDEAHHSSAKT   80 (103)
T ss_pred             CEEEEECCCCCHHHHHHHHHHHHHHCCCCE--EEEE---CCHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf             869995899987999999999998469929--9990---829999999996564601635235378