HHsearch alignment for GI: 254780552 and conserved domain: pfam10236
>pfam10236 DAP3 Mitochondrial ribosomal death-associated protein 3. This is a family of conserved proteins which were originally described as death-associated-protein-3 (DAP-3). The proteins carry a P-loop DNA-binding motif, and induce apoptosis. DAP3 has been shown to be a pro-apoptotic factor in the mitochondrial matrix and to be crucial for mitochondrial biogenesis and so has also been designated as MRP-S29 (mitochondrial ribosomal protein subunit 29).
Probab=95.45 E-value=0.019 Score=34.52 Aligned_cols=32 Identities=28% Similarity=0.365 Sum_probs=23.5
Q ss_pred CCEEEECCCCCCHHH-HHHHHHHHCCCCCCCCC
Q ss_conf 707997378855778-99999986189853125
Q gi|254780552|r 55 DHVLFVGPPGLGKTT-LAQVVARELGVNFRSTS 86 (334)
Q Consensus 55 ~h~Lf~GPpG~GKTt-lA~iiA~~l~~~~~~~s 86 (334)
T Consensus 24 ~r~vL~G~~GsGKS~~L~q~v~~A~~~~wiVl~ 56 (274)
T pfam10236 24 VRFVLTGERGSGKSVLLAQAMAYALTQGWVVLH 56 (274)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEE
T ss_conf 189988979977999999999999859989998